Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0001139

Physical Location & Seq

Genomic Coordinates Forward (+)

23873812 .. 23878268

Gene Structure 4457 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007983

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1911 bp

ATGGCACCAAGTCTCTTACTACTCTTCTCCGCCTTCATCATCCTCTTCTCACCATCCTCATGCTTGAAGCAACATCCCCTAGACTCTCTAACCTCATCCGAGTTCACCCAGATCAAAACCATACTTGCAAAAACATACCAAGCACACAACATAAGCTTCCAATACGTTGGCCTAGACGAACCCGAAAAATCCACCGTCCTCTTATGGAATTTGAAATCCAACACCAAATCCCTACCTTCTCGCCGGGCCTTGGTCGTTACACGCATTAACAGACAGACTCACGAGTCCATAGTCGATTTGTCAACCAGTTCTGTGGTCTCTGACGTTCAAATAGACGACAAACATGGCTACCCTTTGCTAAACAATGAAGAGCAAACTGCCGTTAGCGAATTGCCGTTTACATACAAACCCTTTCTCAAATCCATTAAAAATAGAGGGCTTAACATATCGCAAGTTGTTTGTACCACTTTTTCAGTTGGTTGGTTTGGAGAGAACAAGAGTAGACTGTCGAAGCTGAATTGTTTTTATACAGATGGGACAGTGAACTTGTATGTGACGCCGGTGGAGGGAATTACAGTGGTGGTTGATCTTGAGGAGGTGAAGATAGTTAAGTATAGTGATAAACTGATAATCTTGTGGTTCCAATGCCAAAACCCGAGGGAACAGAGTACCGGGCGTCCAGGCAGAAACCCCCGTTTGTCCGGCGGAGAAGGGTTCAAGCTGGACGGGAACATTGTCAAATGGGCCAACTGGGTCTTCCATCTGGGATTTGATGTTCGAACTGGTGTGGTTATATCCCTAGCATCAATCTACGACCTTGACAAGCACAAATACAGAAGGGTTTTGTACAGAGGTTTTGTGTCAGAGCTTCTTGTACCATACATGGACCCAACCGAGGACTGGTACTACAAAACCTTCTTCGATTGTGGAGAATTCGGGTTCGGCCTCTCAACAGTCTCACTCGAGCCACTGACCGATTGCCCAAGCAATGCCAAGTTCATAGATGGTTACTATGCTGCCGGAGATGGCACGCCAGTGCGGATATCGAATGCCATTTGCATCTTCGAACGACATGCAGCCAACATCTTGTGGCGTCACACAGAAGTTACTATCCCAGATGAAGTGTATTCAATGGAATATCTGCGGATAACGGAGGCCAGGGCCGACGTGACTCTGGTTGTGAGGATGGTTTCCACCATAGGCAACTATGACTATATTATTGACTGGGAGTTCAAACCAAGTGGTTCCATTAAAATAGAGGAGGAAGTTTATGGTACGTTGGTGGCAGATAACTCCATTGCAGTAAACCATGATCACTTCTTGACCTACCATATTGACCTTGATGTGGATGGTGAAGCCAACTCCTTTGTGAAGAACAATTTCGTGACAAAACGAGTTACAGACCCAAACATACCAAGGAAGAGTTACTGGAATGTTGTAAGGGAAACCGCTAAGACAGAAGCAGATGCACGGATTCACCTAGGCTTGAAGCCAGCCGACCTGGTTGTGGTAAATCCTAATAAGAAGACCAAACCCGGGAACCCTATTGGTTACCAGGATGACTACCCACAAATTCGTGGTGCTTTCACCAACTATAATGTTTGGGTTACACCGTACAACAAATCTGAAAAATGGGCGGGAGGACCATATGTTGATCAAAGCCGAGGAGATGATACTTTAGCAGTCTGGAGCAAAAGGAATAGGAAGATTGAGAACAAGGACATAGTGTTGTGGTACACCGTTGGGTTTCGCCACAATCCTTGCCAAGAGGACTTTCCGATGATGCCAACATTGAGCGGTGGATTTGAGCTCCGGCCAGCTAATTTCTTTGAGAGCAGTCCAGTTCTTAAAGTTAGAACAACACCTCCTCCTAAGCATGTACCATCTCCTAATTGCACCAAACAAACCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009987 GO:0010035 GO:0016491 GO:0016638 GO:0016641 GO:0042221 GO:0050896 GO:0051716 GO:0052597 GO:0055114 GO:0070887 GO:0071241 GO:0097184 GO:0097185 GO:1901698 GO:1901699

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

637

Amino Acids

72.2

Weight (kDa)

6.72

Isoelectric Point (pI)

40.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu_amine_oxidN2	PF02727	25 - 107	1.4e-16	Copper amine oxidase, N2 domain
Cu_amine_oxidN3	PF02728	119 - 208	4.2e-20	Copper amine oxidase, N3 domain
Cu_amine_oxid	PF01179	235 - 616	9e-115	Copper amine oxidase, enzyme domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0001139)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31690 AT1G31710
fragaria_vesca	FvH4_2g30510 FvH4_4g15340 FvH4_4g15360 FvH4_4g15380
malus_domestica	MD16G1191900.v1.1 MD16G1192100.v1.1 MD16G1192300.v1.1
prunus_persica	Prupe.1G011900_v2.0.a1 Prupe.1G012000_v2.0.a1
pyrus_communis	pycom16g16160 pycom16g16180 pycom16g16190 pycom16g16200
rosa_chinensis	RchiOBHm_Chr2g0122101 RchiOBHm_Chr4g0416421 RchiOBHm_Chr4g0416431 RchiOBHm_Chr4g0416451 RchiOBHm_Chr4g0416461 RchiOBHm_Chr4g0416501
rosa_laevigata	RLG00000007978 RLG00000007979 RLG00000007982 RLG00000007983
rosa_multiflora	Rmu_co8318835.1_g000001 Rmu_sc0003722.1_g000010 Rmu_sc0003722.1_g000023
rosa_roxburghii	Rroxscaffold_2G00090210 Rroxscaffold_5G00360250 Rroxscaffold_5G00360280 Rroxscaffold_5G00360360 Rroxscaffold_5G00360370
rosa_rugosa	Rorug04G0141800 Rorug04G0141900 Rorug04G0142200
rosa_samantha	Rh4AG204100 Rh4AG204200 Rh4AG204300 Rh4AG204600 Rh4BG201800 Rh4BG202200 Rh4BG202400 Rh4CG215300 Rh4CG215500 Rh4CG215800 Rh4DG201600 Rh4DG201700 Rh4DG201800 Rh5BG514400 Rh5CG538000 Rh5DG526800 Rh7AG414700 Rh7AG415300
rosa_wichuraiana	Rw4G017280 Rw4G017290 Rw4G017310 Rw5G045710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	283
AccB1I	GGYRCC	1 cut(s)	4
AccBSI	CCGCTC	1 cut(s)	1797
AccI	GTMKAC	1 cut(s)	502
AciI	CCGC	7 cut(s)	30, 705, 1039, 1144, 1449, 1637, 1797
AcoI	YGGCCR	1 cut(s)	1814
AcsI	RAATTY	3 cut(s)	208, 932, 1572
AcyI	GRCGYC	3 cut(s)	557, 676, 1093
AfaI	GTAC	9 cut(s)	463, 670, 848, 876, 905, 1276, 1616, 1736, 1881
AfiI	CCNNNNNNNGG	7 cut(s)	250, 566, 895, 900, 1345, 1507, 1536
AgsI	TTSAA	7 cut(s)	67, 214, 329, 718, 1131, 1234, 1489
AjiI	CACGTC	1 cut(s)	1168
AjnI	CCWGG	4 cut(s)	679, 1157, 1500, 1554
AjuI	GAANNNNNNNTTGG	4 cut(s)	740, 772, 1758, 1790
AleI	CACNNNNGTG	1 cut(s)	1034
AloI	GAACNNNNNNTCC	4 cut(s)	759, 791, 1849, 1881
AluBI	AGCT	6 cut(s)	156, 514, 721, 868, 1810, 1820
AluI	AGCT	6 cut(s)	156, 514, 721, 868, 1810, 1820
Alw21I	GWGCWC	1 cut(s)	1812
Alw26I	GTCTC	3 cut(s)	17, 322, 961
Ama87I	CYCGRG	3 cut(s)	655, 962, 1535
AoxI	GGCC	7 cut(s)	169, 246, 744, 943, 1155, 1161, 1814
ApeKI	GCWGC	2 cut(s)	1016, 1076
ApoI	RAATTY	3 cut(s)	208, 932, 1572
Asp700I	GAANNNNTTC	1 cut(s)	1379
AspA2I	CCTAGG	1 cut(s)	1480
AspS9I	GGNCC	5 cut(s)	246, 744, 886, 1161, 1643
AsuC2I	CCSGG	4 cut(s)	245, 673, 1536, 1537
AsuHPI	GGTGA	6 cut(s)	42, 97, 610, 1364, 1469, 1579
AsuII	TTCGAA	2 cut(s)	778, 1065
AvaI	CYCGRG	3 cut(s)	655, 962, 1535
AvaII	GGWCC	2 cut(s)	886, 1643
AvrII	CCTAGG	1 cut(s)	1480
BaeI	ACNNNNGTAYC	2 cut(s)	1266, 1299
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	1 cut(s)	1812
BauI	CACGAG	1 cut(s)	281
BbsI	GAAGAC	2 cut(s)	748, 1532
Bbv12I	GWGCWC	1 cut(s)	1812
BbvI	GCAGC	2 cut(s)	1003, 1088
BccI	CCATC	8 cut(s)	61, 527, 768, 998, 1019, 1180, 1343, 1891
BceAI	ACGGC	2 cut(s)	365, 379
BcgI	CGANNNNNNTGC	2 cut(s)	1055, 1089
BciT130I	CCWGG	4 cut(s)	681, 1159, 1502, 1556
BclI	TGATCA	2 cut(s)	1312, 1654
BcnI	CCSGG	4 cut(s)	245, 673, 1536, 1537
BcoDI	GTCTC	3 cut(s)	17, 322, 961
BfaI	CTAG	5 cut(s)	80, 173, 800, 1481, 1909
BisI	GCNGC	2 cut(s)	1017, 1077
BlnI	CCTAGG	1 cut(s)	1480
BlsI	GCNGC	2 cut(s)	1018, 1078
Bme1390I	CCNGG	8 cut(s)	245, 673, 681, 1159, 1502, 1536, 1537, 1556
Bme18I	GGWCC	2 cut(s)	886, 1643
BmeT110I	CYCGRG	3 cut(s)	655, 962, 1535
BmgBI	CACGTC	1 cut(s)	1168
BmgT120I	GGNCC	5 cut(s)	246, 744, 886, 1161, 1643
BmiI	GGNNCC	5 cut(s)	6, 641, 888, 1246, 1541
BmrFI	CCNGG	8 cut(s)	245, 673, 681, 1159, 1502, 1536, 1537, 1556
BmrI	ACTGGG	2 cut(s)	760, 1234
BmsI	GCATC	4 cut(s)	812, 1068, 1456, 1773
BmuI	ACTGGG	2 cut(s)	760, 1234
BpiI	GAAGAC	2 cut(s)	748, 1532
BpmI	CTGGAG	1 cut(s)	1708
Bpu10I	CCTNAGC	1 cut(s)	1872
Bpu14I	TTCGAA	2 cut(s)	778, 1065
BpuEI	CTTGAG	1 cut(s)	611
BpuMI	CCSGG	4 cut(s)	245, 673, 1536, 1537
BsaHI	GRCGYC	3 cut(s)	557, 676, 1093
BsaI	GGTCTC	1 cut(s)	322
BsaJI	CCNNGG	8 cut(s)	249, 656, 894, 1158, 1415, 1480, 1535, 1663
BsaXI	ACNNNNNCTCC	4 cut(s)	1849, 1852, 1879, 1882
Bsc4I	CCNNNNNNNGG	7 cut(s)	250, 566, 895, 900, 1345, 1507, 1536
Bse118I	RCCGGY	1 cut(s)	559
Bse1I	ACTGG	8 cut(s)	306, 755, 787, 905, 1034, 1229, 1433, 1841
Bse3DI	GCAATG	2 cut(s)	994, 1296
BseBI	CCWGG	4 cut(s)	681, 1159, 1502, 1556
BseDI	CCNNGG	8 cut(s)	249, 656, 894, 1158, 1415, 1480, 1535, 1663
BseGI	GGATG	7 cut(s)	39, 53, 73, 95, 1191, 1354, 1564
BseLI	CCNNNNNNNGG	7 cut(s)	250, 566, 895, 900, 1345, 1507, 1536
BseMI	GCAATG	2 cut(s)	994, 1296
BseNI	ACTGG	8 cut(s)	306, 755, 787, 905, 1034, 1229, 1433, 1841
BseRI	GAGGAG	4 cut(s)	608, 1274, 1680, 1857
BseXI	GCAGC	2 cut(s)	1003, 1088
BshFI	GGCC	7 cut(s)	171, 248, 746, 945, 1157, 1163, 1816
BshNI	GGYRCC	1 cut(s)	4
BsiHKAI	GWGCWC	1 cut(s)	1812
BsiHKCI	CYCGRG	3 cut(s)	655, 962, 1535
BsiSI	CCGG	7 cut(s)	244, 560, 672, 702, 1020, 1536, 1813
BslFI	GGGAC	1 cut(s)	550
BslI	CCNNNNNNNGG	7 cut(s)	250, 566, 895, 900, 1345, 1507, 1536
BsmAI	GTCTC	3 cut(s)	17, 322, 961
BsmFI	GGGAC	1 cut(s)	550
BsmI	GAATGC	1 cut(s)	1054
BsnI	GGCC	7 cut(s)	171, 248, 746, 945, 1157, 1163, 1816
Bso31I	GGTCTC	1 cut(s)	322
BsoBI	CYCGRG	3 cut(s)	655, 962, 1535
Bsp119I	TTCGAA	2 cut(s)	778, 1065
Bsp1286I	GDGCHC	1 cut(s)	1812
Bsp1407I	TGTACA	1 cut(s)	846
Bsp143I	GATC	4 cut(s)	111, 586, 1312, 1654
BspACI	CCGC	7 cut(s)	30, 705, 1039, 1144, 1449, 1637, 1797
BspANI	GGCC	7 cut(s)	171, 248, 746, 945, 1157, 1163, 1816
BspLI	GGNNCC	5 cut(s)	6, 641, 888, 1246, 1541
BspQI	GCTCTTC	1 cut(s)	363
BspT104I	TTCGAA	2 cut(s)	778, 1065
BspT107I	GGYRCC	1 cut(s)	4
BspTNI	GGTCTC	1 cut(s)	322
BsrBI	CCGCTC	1 cut(s)	1797
BsrDI	GCAATG	2 cut(s)	994, 1296
BsrFI	RCCGGY	1 cut(s)	559
BsrGI	TGTACA	1 cut(s)	846
BsrI	ACTGG	8 cut(s)	306, 755, 787, 905, 1034, 1229, 1433, 1841
BssAI	RCCGGY	1 cut(s)	559
BssECI	CCNNGG	8 cut(s)	249, 656, 894, 1158, 1415, 1480, 1535, 1663
BssMI	GATC	4 cut(s)	111, 586, 1312, 1654
BssNI	GRCGYC	3 cut(s)	557, 676, 1093
BssSI	CACGAG	1 cut(s)	281
BssT1I	CCWWGG	3 cut(s)	249, 1415, 1480
Bst2BI	CACGAG	1 cut(s)	281
Bst2UI	CCWGG	4 cut(s)	681, 1159, 1502, 1556
Bst4CI	ACNGT	7 cut(s)	196, 507, 541, 577, 955, 1614, 1741
Bst6I	CTCTTC	4 cut(s)	29, 50, 363, 1415
BstACI	GRCGYC	3 cut(s)	557, 676, 1093
BstAUI	TGTACA	1 cut(s)	846
BstBI	TTCGAA	2 cut(s)	778, 1065
BstC8I	GCNNGC	3 cut(s)	1031, 1494, 1818
BstDEI	CTNAG	2 cut(s)	1452, 1872
BstEII	GGTNACC	1 cut(s)	1550
BstF5I	GGATG	7 cut(s)	39, 53, 73, 95, 1191, 1354, 1564
BstKTI	GATC	4 cut(s)	114, 589, 1315, 1657
BstMAI	GTCTC	3 cut(s)	17, 322, 961
BstMBI	GATC	4 cut(s)	111, 586, 1312, 1654
BstNI	CCWGG	4 cut(s)	681, 1159, 1502, 1556
BstNSI	RCATGY	2 cut(s)	1076, 1880
BstPI	GGTNACC	1 cut(s)	1550
BstSCI	CCNGG	8 cut(s)	243, 671, 679, 1157, 1500, 1534, 1535, 1554
BstV1I	GCAGC	2 cut(s)	1003, 1088
BstV2I	GAAGAC	2 cut(s)	748, 1532
BstXI	CCANNNNNNTGG	2 cut(s)	167, 313
BsuRI	GGCC	7 cut(s)	171, 248, 746, 945, 1157, 1163, 1816
BtrI	CACGTC	1 cut(s)	1168
BtsCI	GGATG	7 cut(s)	39, 53, 73, 95, 1191, 1354, 1564
BtsIMutI	CAGTG	4 cut(s)	546, 582, 968, 1041
Cac8I	GCNNGC	3 cut(s)	1031, 1494, 1818
Cfr10I	RCCGGY	1 cut(s)	559
Cfr13I	GGNCC	5 cut(s)	246, 744, 886, 1161, 1643
Cfr9I	CCCGGG	1 cut(s)	1535
CseI	GACGC	3 cut(s)	565, 665, 1082
CsiI	ACCWGGT	1 cut(s)	1500
Csp6I	GTAC	9 cut(s)	462, 669, 847, 875, 904, 1275, 1615, 1735, 1880
CspCI	CAANNNNNGTGG	4 cut(s)	1222, 1257, 1742, 1777
CviAII	CATG	6 cut(s)	60, 344, 883, 1073, 1310, 1877
CviQI	GTAC	9 cut(s)	462, 669, 847, 875, 904, 1275, 1615, 1735, 1880
DdeI	CTNAG	2 cut(s)	1452, 1872
DpnI	GATC	4 cut(s)	113, 588, 1314, 1656
DpnII	GATC	4 cut(s)	111, 586, 1312, 1654
DrdI	GACNNNNNNGTC	1 cut(s)	283
DseDI	GACNNNNNNGTC	1 cut(s)	283
EaeI	YGGCCR	1 cut(s)	1814
Eam1104I	CTCTTC	4 cut(s)	29, 50, 363, 1415
EarI	CTCTTC	4 cut(s)	29, 50, 363, 1415
EciI	GGCGGA	2 cut(s)	19, 720
Ecl136II	GAGCTC	1 cut(s)	1810
Eco130I	CCWWGG	3 cut(s)	249, 1415, 1480
Eco24I	GRGCYC	1 cut(s)	1812
Eco31I	GGTCTC	1 cut(s)	322
Eco32I	GATATC	1 cut(s)	1044
Eco47I	GGWCC	2 cut(s)	886, 1643
Eco53kI	GAGCTC	1 cut(s)	1810
Eco88I	CYCGRG	3 cut(s)	655, 962, 1535
Eco91I	GGTNACC	1 cut(s)	1550
EcoICRI	GAGCTC	1 cut(s)	1810
EcoO65I	GGTNACC	1 cut(s)	1550
EcoRI	GAATTC	1 cut(s)	932
EcoRII	CCWGG	4 cut(s)	679, 1157, 1500, 1554
EcoRV	GATATC	1 cut(s)	1044
EcoT14I	CCWWGG	3 cut(s)	249, 1415, 1480
EcoT38I	GRGCYC	1 cut(s)	1812
ErhI	CCWWGG	3 cut(s)	249, 1415, 1480
FaeI	CATG	6 cut(s)	63, 347, 886, 1076, 1313, 1880
FaqI	GGGAC	1 cut(s)	550
FatI	CATG	6 cut(s)	59, 343, 882, 1072, 1309, 1876
FauI	CCCGC	1 cut(s)	1630
FauNDI	CATATG	1 cut(s)	1648
FbaI	TGATCA	2 cut(s)	1312, 1654
FblI	GTMKAC	1 cut(s)	502
Fnu4HI	GCNGC	2 cut(s)	1017, 1077
FokI	GGATG	7 cut(s)	26, 40, 60, 82, 1198, 1361, 1571
FriOI	GRGCYC	1 cut(s)	1812
Fsp4HI	GCNGC	2 cut(s)	1017, 1077
FspBI	CTAG	5 cut(s)	80, 173, 800, 1481, 1909
GluI	GCNGC	2 cut(s)	1017, 1077
GsuI	CTGGAG	1 cut(s)	1708
HaeIII	GGCC	7 cut(s)	171, 248, 746, 945, 1157, 1163, 1816
HapII	CCGG	7 cut(s)	244, 560, 672, 702, 1020, 1536, 1813
HgaI	GACGC	3 cut(s)	565, 665, 1082
Hin1I	GRCGYC	3 cut(s)	557, 676, 1093
Hin1II	CATG	6 cut(s)	63, 347, 886, 1076, 1313, 1880
HincII	GTYRAC	1 cut(s)	303
HindII	GTYRAC	1 cut(s)	303
HindIII	AAGCTT	1 cut(s)	154
HinfI	GANTC	5 cut(s)	83, 277, 284, 1171, 1474
HpaII	CCGG	7 cut(s)	244, 560, 672, 702, 1020, 1536, 1813
HphI	GGTGA	6 cut(s)	42, 97, 610, 1364, 1469, 1579
Hpy166II	GTNNAC	7 cut(s)	105, 303, 399, 503, 544, 1306, 1737
Hpy188I	TCNGA	5 cut(s)	100, 322, 865, 1627, 1779
Hpy188III	TCNNGA	5 cut(s)	281, 590, 1321, 1384, 1687
Hpy8I	GTNNAC	7 cut(s)	105, 303, 399, 503, 544, 1306, 1737
Hpy99I	CGWCG	1 cut(s)	1169
HpyAV	CCTTC	5 cut(s)	43, 246, 704, 831, 925
HpyCH4III	ACNGT	7 cut(s)	196, 507, 541, 577, 955, 1614, 1741
HpyCH4IV	ACGT	4 cut(s)	165, 324, 1167, 1277
HpyCH4V	TGCA	6 cut(s)	128, 1059, 1076, 1301, 1469, 1896
HpyF3I	CTNAG	2 cut(s)	1452, 1872
HpySE526I	ACGT	4 cut(s)	165, 324, 1167, 1277
Hsp92I	GRCGYC	3 cut(s)	557, 676, 1093
Hsp92II	CATG	6 cut(s)	63, 347, 886, 1076, 1313, 1880
Ksp22I	TGATCA	2 cut(s)	1312, 1654
Kzo9I	GATC	4 cut(s)	111, 586, 1312, 1654
LguI	GCTCTTC	1 cut(s)	363
LmnI	GCTCC	2 cut(s)	1689, 1815
Lsp1109I	GCAGC	2 cut(s)	1003, 1088
LweI	GCATC	4 cut(s)	812, 1068, 1456, 1773
MabI	ACCWGGT	1 cut(s)	1500
MaeI	CTAG	5 cut(s)	80, 173, 800, 1481, 1909
MaeII	ACGT	4 cut(s)	165, 324, 1167, 1277
MalI	GATC	4 cut(s)	113, 588, 1314, 1656
MbiI	CCGCTC	1 cut(s)	1797
MboI	GATC	4 cut(s)	111, 586, 1312, 1654
MhlI	GDGCHC	1 cut(s)	1812
MluCI	AATT	9 cut(s)	208, 389, 517, 570, 932, 1378, 1572, 1822, 1891
MlyI	GAGTC	4 cut(s)	77, 271, 293, 1165
MmeI	TCCRAC	1 cut(s)	243
MroXI	GAANNNNTTC	1 cut(s)	1379
MseI	TTAA	6 cut(s)	267, 426, 441, 609, 1251, 1848
MslI	CAYNNNNRTG	2 cut(s)	58, 1034
MspI	CCGG	7 cut(s)	244, 560, 672, 702, 1020, 1536, 1813
MspR9I	CCNGG	8 cut(s)	245, 673, 681, 1159, 1502, 1536, 1537, 1556
Mva1269I	GAATGC	1 cut(s)	1054
MvaI	CCWGG	4 cut(s)	681, 1159, 1502, 1556
NciI	CCSGG	4 cut(s)	245, 673, 1536, 1537
NdeI	CATATG	1 cut(s)	1648
NdeII	GATC	4 cut(s)	111, 586, 1312, 1654
NlaIII	CATG	6 cut(s)	63, 347, 886, 1076, 1313, 1880
NlaIV	GGNNCC	5 cut(s)	6, 641, 888, 1246, 1541
NmeAIII	GCCGAG	1 cut(s)	1688
NmuCI	GTSAC	4 cut(s)	553, 1094, 1168, 1384
NspI	RCATGY	2 cut(s)	1076, 1880
NspV	TTCGAA	2 cut(s)	778, 1065
OliI	CACNNNNGTG	1 cut(s)	1034
PaeR7I	CTCGAG	1 cut(s)	962
PciSI	GCTCTTC	1 cut(s)	363
PctI	GAATGC	1 cut(s)	1054
PdmI	GAANNNNTTC	1 cut(s)	1379
PfeI	GAWTC	1 cut(s)	1474
PkrI	GCNGC	2 cut(s)	1018, 1078
PleI	GAGTC	4 cut(s)	77, 271, 292, 1165
PpsI	GAGTC	4 cut(s)	77, 271, 292, 1165
Psp124BI	GAGCTC	1 cut(s)	1812
Psp6I	CCWGG	4 cut(s)	679, 1157, 1500, 1554
PspEI	GGTNACC	1 cut(s)	1550
PspGI	CCWGG	4 cut(s)	679, 1157, 1500, 1554
PspN4I	GGNNCC	5 cut(s)	6, 641, 888, 1246, 1541
PspPI	GGNCC	5 cut(s)	246, 744, 886, 1161, 1643
PspXI	VCTCGAGB	1 cut(s)	962
RsaI	GTAC	9 cut(s)	463, 670, 848, 876, 905, 1276, 1616, 1736, 1881
RsaNI	GTAC	9 cut(s)	462, 669, 847, 875, 904, 1275, 1615, 1735, 1880
RseI	CAYNNNNRTG	2 cut(s)	58, 1034
SacI	GAGCTC	1 cut(s)	1812
SapI	GCTCTTC	1 cut(s)	363
SaqAI	TTAA	6 cut(s)	267, 426, 441, 609, 1251, 1848
SatI	GCNGC	2 cut(s)	1017, 1077
Sau3AI	GATC	4 cut(s)	111, 586, 1312, 1654
Sau96I	GGNCC	5 cut(s)	246, 744, 886, 1161, 1643
SchI	GAGTC	4 cut(s)	77, 271, 293, 1165
ScrFI	CCNGG	8 cut(s)	245, 673, 681, 1159, 1502, 1536, 1537, 1556
SduI	GDGCHC	1 cut(s)	1812
SexAI	ACCWGGT	1 cut(s)	1500
SfaNI	GCATC	4 cut(s)	812, 1068, 1456, 1773
Sfr274I	CTCGAG	1 cut(s)	962
SfuI	TTCGAA	2 cut(s)	778, 1065
SgrAI	CRCCGGYG	1 cut(s)	559
SinI	GGWCC	2 cut(s)	886, 1643
SlaI	CTCGAG	1 cut(s)	962
SmaI	CCCGGG	1 cut(s)	1537
SmiMI	CAYNNNNRTG	2 cut(s)	58, 1034
SmlI	CTYRAG	2 cut(s)	590, 962
SmoI	CTYRAG	2 cut(s)	590, 962
Sse9I	AATT	9 cut(s)	208, 389, 517, 570, 932, 1378, 1572, 1822, 1891
SsiI	CCGC	7 cut(s)	30, 705, 1039, 1144, 1449, 1637, 1797
SspMI	CTAG	5 cut(s)	80, 173, 800, 1481, 1909
SstI	GAGCTC	1 cut(s)	1812
StyD4I	CCNGG	8 cut(s)	243, 671, 679, 1157, 1500, 1534, 1535, 1554
StyI	CCWWGG	3 cut(s)	249, 1415, 1480
TaaI	ACNGT	7 cut(s)	196, 507, 541, 577, 955, 1614, 1741
TaiI	ACGT	4 cut(s)	168, 327, 1170, 1280
TaqI	TCGA	7 cut(s)	294, 509, 778, 921, 963, 1046, 1065
TaqII	GACCGA	1 cut(s)	989
TasI	AATT	9 cut(s)	208, 389, 517, 570, 932, 1378, 1572, 1822, 1891
TatI	WGTACW	1 cut(s)	846
TfiI	GAWTC	1 cut(s)	1474
Tru1I	TTAA	6 cut(s)	267, 426, 441, 609, 1251, 1848
Tru9I	TTAA	6 cut(s)	267, 426, 441, 609, 1251, 1848
TscAI	CASTG	4 cut(s)	546, 582, 975, 1041
TseFI	GTSAC	4 cut(s)	553, 1094, 1168, 1384
TseI	GCWGC	2 cut(s)	1016, 1076
Tsp45I	GTSAC	4 cut(s)	553, 1094, 1168, 1384
TspDTI	ATGAA	4 cut(s)	25, 381, 988, 1134
TspGWI	ACGGA	2 cut(s)	1166, 1486
TspMI	CCCGGG	1 cut(s)	1535
TspRI	CASTG	4 cut(s)	546, 582, 975, 1041
VpaK11BI	GGWCC	2 cut(s)	886, 1643
XapI	RAATTY	3 cut(s)	208, 932, 1572
XceI	RCATGY	2 cut(s)	1076, 1880
XcmI	CCANNNNNNNNNTGG	1 cut(s)	897
XhoI	CTCGAG	1 cut(s)	962
XmaI	CCCGGG	1 cut(s)	1535
XmaJI	CCTAGG	1 cut(s)	1480
XmiI	GTMKAC	1 cut(s)	502
XmnI	GAANNNNTTC	1 cut(s)	1379
XspI	CTAG	5 cut(s)	80, 173, 800, 1481, 1909

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.