Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0001139

Physical Location & Seq

Genomic Coordinates Forward (+)

23806819 .. 23810216

Gene Structure 3398 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007979

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2043 bp

ATGCACGGTGAAGCTGCCATGGCTTCTTCAACGTTGATGCTCTTCTTCTTTCTCTCTTCCTTCTTCACCTTCTCACCGATCCCATGCCTCGGCCGGTACCACCCACTAGACCCTCTAACCCCATCTGAGTTCACTCAGGTCCGAACCATCGTCAAAAAATCATACCCCAGCTCCATCCACAACCTCACATTCCAATACATAGCCTTAGACGAGCCAGACAAATACGTAGTCAAGTCATGGCTGTCGAAAACAAACTCTAAACCCAAAACCCTACCTCGCCGAGCCTTGGTCATAACAAGGCTCGACAACCACTCCCACGAGATCGTAGTGGACTTATCAACTCATTCCGTAGTCTCCGATAAGGTCTATGGAGGACACGGCTACCCTTTGCTGACGATGGACGAACAAACAGTTGCAAGTGAGCTCCCACTGTCCTACAAACCATTTATCAACTCGGTCAAGAAGAGGGGACTTAACTTGTCCGAGGTTGTTTGCTCCACGTTTTCAGTTGGGTGGTTTGGCGAAGAACATAATAAAAGAGTGATCAAAATTTTGTGTTACTATATTGAGGGAACACCTAACTTGTACATGAGGCCCTTGGAGGGAATATCACTGGTGGTTGATCTTGATGAACTGAAAATAGCTGAGTGTTATGATCGAGATAGGATTCCGGTGCCGAAAGCTCAAGGAACCGAGTATCGGCTGTCGAAGCAGAAGCCGCCTTTCGGTCCAAAATTTAATGGTTTCACCACTGTGCAGCCAGACGGACCTGGGTTTAAGATTGACGGGCACACGATAAGTTGGGCTAACTGGGTCTTCCATCTCGGATTTGATGTTCGAGCCGGTCCAGTAATTTCTACGGCATCGATTTATGACCTCGGAAAGGCCACATACCGTCAAGTATTGTACAGATCATTCATATCCGAGCTGTTTGTGCCATACATGGACCCAACTGAAGAATGGTACTACAAAACCTTCTTTGATGCCGGTGAATTTGGGTTTGGTCAATCTGCTGTGCCGCTAGAGCCCTTGACCGATTGCCCTGAAAATGCTGTATTTATGGACGCTTACTATGCTAGCTCAGATGGGACTCCAGTTAAAATAACAAATGCTTTTTGCATATTTGAGCAACATGCTGGGAGTGCCTTGTGGCGGCACACTGAAATAGCAATTCCAGGGGAACTGATAACCGAGGTTAGACCAGAGGTGAACCTGATAGTGAGGATGGTTTCGACTGTGGGCAACTATGATTATGTACTTGACTGGGAATTTAAGCCAAGCGGTTCCATCAAGTTTGGGGTTGGACTAACAGGAATACTAGAGGTGAAGGGGGCGCCATACACGCATACTGATCAAATAAAGGAGGATGCTTATGGTACATTGCTTGCAGATTACACCATCGGGGTATACCATGATCACTTCTTGACCTACTATCTTGATCTCGATGTGGATGGGGAAGCCAACTCCTTTGTCAAGAACAATTTGGTGACCAAGAGAGTAACAGATCATAGCTCACCAAGGAAGAGTTACTGGACAGTTGAGAGCGAAACAGCTAAGACCGAATCAGAAGCAAAAATTCAACTGGGTTTGAAGCCAGCTGATCTAGTCTTGATAAACCCTAATAAGAAGACTAAACCTGGAAACAACATAGGCTATCGTCTAATTCCAGGGTCAATATCAAACCCACTTTTGTCCCATGACGATTACCCACAAATCCGAGGTGCCTTCACCAACTACAATCTATGGGTCACACCTTATAACAAGTCGGAAAAATGGGCAGGAGGTCAGTTTGTTGATCAGAGCCGTGGAGATGACACTTTGGCTACTTGGAGCCTCAGGAACCGAGAGATTGAGAATAAGGACATTGTGTTATGGTACACCATGGGATTTCATCATGTTCCTTGCCAAGAAGACTTTCCGGTGATGCCAACATTAAGTGGTGGATTTGAGCTCCGGCCTACCAATTTCTTCGAGAGCAATCCGGTGCTTAAAGCAAAACCTCCTAAGCACGAGCACATGCCTAACTGCACTAAAAAACCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009987 GO:0010035 GO:0016491 GO:0016638 GO:0016641 GO:0042221 GO:0050896 GO:0051716 GO:0052597 GO:0055114 GO:0070887 GO:0071241 GO:0097184 GO:0097185 GO:1901698 GO:1901699

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

681

Amino Acids

76.88

Weight (kDa)

6.11

Isoelectric Point (pI)

34.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu_amine_oxidN2	PF02727	34 - 121	1.3e-17	Copper amine oxidase, N2 domain
Cu_amine_oxidN3	PF02728	129 - 226	3e-21	Copper amine oxidase, N3 domain
Cu_amine_oxid	PF01179	251 - 663	7.6e-142	Copper amine oxidase, enzyme domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001139)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31690 AT1G31710
fragaria_vesca	FvH4_2g30510 FvH4_4g15340 FvH4_4g15360 FvH4_4g15380
malus_domestica	MD16G1191900.v1.1 MD16G1192100.v1.1 MD16G1192300.v1.1
prunus_persica	Prupe.1G011900_v2.0.a1 Prupe.1G012000_v2.0.a1
pyrus_communis	pycom16g16160 pycom16g16180 pycom16g16190 pycom16g16200
rosa_chinensis	RchiOBHm_Chr2g0122101 RchiOBHm_Chr4g0416421 RchiOBHm_Chr4g0416431 RchiOBHm_Chr4g0416451 RchiOBHm_Chr4g0416461 RchiOBHm_Chr4g0416501
rosa_laevigata	RLG00000007978 RLG00000007979 RLG00000007982 RLG00000007983
rosa_multiflora	Rmu_co8318835.1_g000001 Rmu_sc0003722.1_g000010 Rmu_sc0003722.1_g000023
rosa_roxburghii	Rroxscaffold_2G00090210 Rroxscaffold_5G00360250 Rroxscaffold_5G00360280 Rroxscaffold_5G00360360 Rroxscaffold_5G00360370
rosa_rugosa	Rorug04G0141800 Rorug04G0141900 Rorug04G0142200
rosa_samantha	Rh4AG204100 Rh4AG204200 Rh4AG204300 Rh4AG204600 Rh4BG201800 Rh4BG202200 Rh4BG202400 Rh4CG215300 Rh4CG215500 Rh4CG215800 Rh4DG201600 Rh4DG201700 Rh4DG201800 Rh5BG514400 Rh5CG538000 Rh5DG526800 Rh7AG414700 Rh7AG415300
rosa_wichuraiana	Rw4G017280 Rw4G017290 Rw4G017310 Rw5G045710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1758
Acc65I	GGTACC	1 cut(s)	96
AccB1I	GGYRCC	4 cut(s)	96, 673, 1333, 1721
AccI	GTMKAC	1 cut(s)	1407
AciI	CCGC	4 cut(s)	719, 1019, 1153, 1281
AclI	AACGTT	1 cut(s)	32
AclWI	GGATC	1 cut(s)	73
AcoI	YGGCCR	1 cut(s)	91
AcsI	RAATTY	5 cut(s)	549, 734, 992, 1268, 1575
AcuI	CTGAAG	1 cut(s)	975
AcyI	GRCGYC	1 cut(s)	1334
AfaI	GTAC	7 cut(s)	98, 587, 908, 965, 1257, 1378, 1877
AfiI	CCNNNNNNNGG	7 cut(s)	89, 286, 602, 699, 725, 883, 1152
AgsI	TTSAA	3 cut(s)	30, 1580, 1591
AjnI	CCWGG	4 cut(s)	769, 1174, 1636, 1666
AjuI	GAANNNNNNNTTGG	4 cut(s)	984, 1016, 1899, 1931
AleI	CACNNNNGTG	1 cut(s)	752
AloI	GAACNNNNNNTCC	2 cut(s)	819, 851
Alw21I	GWGCWC	3 cut(s)	426, 1953, 2016
Alw26I	GTCTC	1 cut(s)	358
AlwI	GGATC	1 cut(s)	73
AoxI	GGCC	4 cut(s)	91, 593, 885, 1955
ApeKI	GCWGC	2 cut(s)	14, 757
ApoI	RAATTY	5 cut(s)	549, 734, 992, 1268, 1575
ArsI	GACNNNNNNTTYG	2 cut(s)	213, 245
Asp700I	GAANNNNTTC	1 cut(s)	1914
Asp718I	GGTACC	1 cut(s)	96
AspLEI	GCGC	1 cut(s)	1336
AspS9I	GGNCC	6 cut(s)	139, 594, 728, 767, 845, 946
AsuNHI	GCTAGC	1 cut(s)	1076
AvaII	GGWCC	5 cut(s)	139, 728, 767, 845, 946
AxyI	CCTNAGG	1 cut(s)	1835
BaeGI	GKGCMC	1 cut(s)	792
BanI	GGYRCC	4 cut(s)	96, 673, 1333, 1721
BanII	GRGCYC	3 cut(s)	426, 1029, 1953
BauI	CACGAG	2 cut(s)	317, 2009
BbsI	GAAGAC	3 cut(s)	808, 1634, 1917
Bbv12I	GWGCWC	3 cut(s)	426, 1953, 2016
BbvI	GCAGC	1 cut(s)	769
BceAI	ACGGC	3 cut(s)	394, 876, 1788
BciT130I	CCWGG	4 cut(s)	771, 1176, 1638, 1668
BclI	TGATCA	4 cut(s)	543, 1351, 1414, 1795
BcoDI	GTCTC	1 cut(s)	358
BfaI	CTAG	5 cut(s)	107, 1022, 1077, 1319, 1604
BfoI	RGCGCY	1 cut(s)	1337
BisI	GCNGC	5 cut(s)	15, 719, 758, 1019, 1154
BlsI	GCNGC	5 cut(s)	16, 720, 759, 1020, 1155
Bme1390I	CCNGG	4 cut(s)	771, 1176, 1638, 1668
Bme18I	GGWCC	5 cut(s)	139, 728, 767, 845, 946
BmgT120I	GGNCC	6 cut(s)	139, 594, 728, 767, 845, 946
BmiI	GGNNCC	9 cut(s)	98, 675, 691, 948, 1285, 1335, 1723, 1832, 1841
BmrFI	CCNGG	4 cut(s)	771, 1176, 1638, 1668
BmrI	ACTGGG	3 cut(s)	820, 1273, 1592
BmsI	GCATC	5 cut(s)	27, 872, 973, 1357, 1914
BmtI	GCTAGC	1 cut(s)	1080
BmuI	ACTGGG	3 cut(s)	820, 1273, 1592
BpiI	GAAGAC	3 cut(s)	808, 1634, 1917
BpmI	CTGGAG	1 cut(s)	1077
Bpu10I	CCTNAGC	1 cut(s)	2004
BpuEI	CTTGAG	1 cut(s)	669
Bsa29I	ATCGAT	1 cut(s)	866
BsaAI	YACGTR	1 cut(s)	226
BsaHI	GRCGYC	1 cut(s)	1334
BsaWI	WCCGGW	3 cut(s)	670, 1918, 1981
BsaXI	ACNNNNNCTCC	4 cut(s)	155, 185, 296, 326
Bsc4I	CCNNNNNNNGG	7 cut(s)	89, 286, 602, 699, 725, 883, 1152
Bse118I	RCCGGY	3 cut(s)	93, 842, 986
Bse1I	ACTGG	7 cut(s)	618, 815, 848, 1094, 1268, 1535, 1587
Bse21I	CCTNAGG	1 cut(s)	1835
Bse3DI	GCAATG	1 cut(s)	1379
BseBI	CCWGG	4 cut(s)	771, 1176, 1638, 1668
BseCI	ATCGAT	1 cut(s)	866
BseGI	GGATG	4 cut(s)	174, 1230, 1372, 1456
BseLI	CCNNNNNNNGG	7 cut(s)	89, 286, 602, 699, 725, 883, 1152
BseMI	GCAATG	1 cut(s)	1379
BseMII	CTCAG	5 cut(s)	117, 149, 636, 1095, 1849
BseNI	ACTGG	7 cut(s)	618, 815, 848, 1094, 1268, 1535, 1587
BseSI	GKGCMC	1 cut(s)	792
BseX3I	CGGCCG	1 cut(s)	91
BseXI	GCAGC	1 cut(s)	769
BseYI	CCCAGC	2 cut(s)	167, 1136
BsgI	GTGCAG	2 cut(s)	776, 2011
Bsh1285I	CGRYCG	1 cut(s)	94
BshFI	GGCC	4 cut(s)	93, 595, 887, 1957
BshNI	GGYRCC	4 cut(s)	96, 673, 1333, 1721
BshVI	ATCGAT	1 cut(s)	866
BsiEI	CGRYCG	1 cut(s)	94
BsiHKAI	GWGCWC	3 cut(s)	426, 1953, 2016
BsiSI	CCGG	7 cut(s)	94, 671, 843, 987, 1919, 1954, 1982
BslFI	GGGAC	3 cut(s)	483, 1102, 1678
BslI	CCNNNNNNNGG	7 cut(s)	89, 286, 602, 699, 725, 883, 1152
BsmAI	GTCTC	1 cut(s)	358
BsmFI	GGGAC	3 cut(s)	483, 1102, 1678
BsnI	GGCC	4 cut(s)	93, 595, 887, 1957
Bsp1286I	GDGCHC	5 cut(s)	426, 792, 1029, 1953, 2016
Bsp1407I	TGTACA	2 cut(s)	585, 906
Bsp19I	CCATGG	2 cut(s)	18, 1881
BspACI	CCGC	4 cut(s)	719, 1019, 1153, 1281
BspANI	GGCC	4 cut(s)	93, 595, 887, 1957
BspCNI	CTCAG	5 cut(s)	118, 148, 637, 1094, 1848
BspDI	ATCGAT	1 cut(s)	866
BspLI	GGNNCC	9 cut(s)	98, 675, 691, 948, 1285, 1335, 1723, 1832, 1841
BspOI	GCTAGC	1 cut(s)	1080
BspPI	GGATC	1 cut(s)	73
BspQI	GCTCTTC	1 cut(s)	47
BspT107I	GGYRCC	4 cut(s)	96, 673, 1333, 1721
BsrDI	GCAATG	1 cut(s)	1379
BsrFI	RCCGGY	3 cut(s)	93, 842, 986
BsrGI	TGTACA	2 cut(s)	585, 906
BsrI	ACTGG	7 cut(s)	618, 815, 848, 1094, 1268, 1535, 1587
BssAI	RCCGGY	3 cut(s)	93, 842, 986
BssNAI	GTATAC	1 cut(s)	1408
BssNI	GRCGYC	1 cut(s)	1334
BssSI	CACGAG	2 cut(s)	317, 2009
BssT1I	CCWWGG	5 cut(s)	18, 285, 597, 1517, 1881
Bst1107I	GTATAC	1 cut(s)	1408
Bst2BI	CACGAG	2 cut(s)	317, 2009
Bst2UI	CCWGG	4 cut(s)	771, 1176, 1638, 1668
Bst4CI	ACNGT	7 cut(s)	8, 412, 432, 754, 896, 1237, 1537
Bst6I	CTCTTC	4 cut(s)	47, 61, 458, 1517
BstACI	GRCGYC	1 cut(s)	1334
BstAUI	TGTACA	2 cut(s)	585, 906
BstBAI	YACGTR	1 cut(s)	226
BstC8I	GCNNGC	3 cut(s)	1078, 1386, 1596
BstDEI	CTNAG	8 cut(s)	126, 135, 205, 645, 1081, 1554, 1835, 2004
BstDSI	CCRYGG	3 cut(s)	18, 1804, 1881
BstEII	GGTNACC	1 cut(s)	1486
BstENI	CCTNNNNNAGG	1 cut(s)	881
BstF5I	GGATG	4 cut(s)	174, 1230, 1372, 1456
BstH2I	RGCGCY	1 cut(s)	1337
BstHHI	GCGC	1 cut(s)	1336
BstMAI	GTCTC	1 cut(s)	358
BstMCI	CGRYCG	1 cut(s)	94
BstMWI	GCNNNNNNNGC	8 cut(s)	20, 709, 718, 934, 1024, 1073, 1142, 1342
BstNI	CCWGG	4 cut(s)	771, 1176, 1638, 1668
BstNSI	RCATGY	2 cut(s)	1136, 2020
BstPI	GGTNACC	1 cut(s)	1486
BstSCI	CCNGG	4 cut(s)	769, 1174, 1636, 1666
BstSLI	GKGCMC	1 cut(s)	792
BstSNI	TACGTA	1 cut(s)	226
BstV1I	GCAGC	1 cut(s)	769
BstV2I	GAAGAC	3 cut(s)	808, 1634, 1917
BstZ17I	GTATAC	1 cut(s)	1408
BstZI	CGGCCG	1 cut(s)	91
Bsu15I	ATCGAT	1 cut(s)	866
Bsu36I	CCTNAGG	1 cut(s)	1835
BsuRI	GGCC	4 cut(s)	93, 595, 887, 1957
BsuTUI	ATCGAT	1 cut(s)	866
BtgI	CCRYGG	3 cut(s)	18, 1804, 1881
BtsCI	GGATG	4 cut(s)	174, 1230, 1372, 1456
BtsIMutI	CAGTG	4 cut(s)	428, 611, 750, 1158
Cac8I	GCNNGC	3 cut(s)	1078, 1386, 1596
CfoI	GCGC	1 cut(s)	1336
Cfr10I	RCCGGY	3 cut(s)	93, 842, 986
Cfr13I	GGNCC	6 cut(s)	139, 594, 728, 767, 845, 946
ClaI	ATCGAT	1 cut(s)	866
CseI	GACGC	1 cut(s)	1073
Csp6I	GTAC	7 cut(s)	97, 586, 907, 964, 1256, 1377, 1876
CviQI	GTAC	7 cut(s)	97, 586, 907, 964, 1256, 1377, 1876
DdeI	CTNAG	8 cut(s)	126, 135, 205, 645, 1081, 1554, 1835, 2004
DinI	GGCGCC	1 cut(s)	1335
EaeI	YGGCCR	1 cut(s)	91
EagI	CGGCCG	1 cut(s)	91
Eam1104I	CTCTTC	4 cut(s)	47, 61, 458, 1517
EarI	CTCTTC	4 cut(s)	47, 61, 458, 1517
Ecl136II	GAGCTC	2 cut(s)	424, 1951
EclXI	CGGCCG	1 cut(s)	91
Eco105I	TACGTA	1 cut(s)	226
Eco130I	CCWWGG	5 cut(s)	18, 285, 597, 1517, 1881
Eco24I	GRGCYC	3 cut(s)	426, 1029, 1953
Eco47I	GGWCC	5 cut(s)	139, 728, 767, 845, 946
Eco52I	CGGCCG	1 cut(s)	91
Eco53kI	GAGCTC	2 cut(s)	424, 1951
Eco57I	CTGAAG	1 cut(s)	975
Eco81I	CCTNAGG	1 cut(s)	1835
Eco91I	GGTNACC	1 cut(s)	1486
EcoICRI	GAGCTC	2 cut(s)	424, 1951
EcoNI	CCTNNNNNAGG	1 cut(s)	881
EcoO109I	RGGNCCY	1 cut(s)	594
EcoO65I	GGTNACC	1 cut(s)	1486
EcoRII	CCWGG	4 cut(s)	769, 1174, 1636, 1666
EcoT14I	CCWWGG	5 cut(s)	18, 285, 597, 1517, 1881
EcoT38I	GRGCYC	3 cut(s)	426, 1029, 1953
EgeI	GGCGCC	1 cut(s)	1335
EheI	GGCGCC	1 cut(s)	1335
ErhI	CCWWGG	5 cut(s)	18, 285, 597, 1517, 1881
FaqI	GGGAC	3 cut(s)	483, 1102, 1678
FbaI	TGATCA	4 cut(s)	543, 1351, 1414, 1795
FblI	GTMKAC	1 cut(s)	1407
Fnu4HI	GCNGC	5 cut(s)	15, 719, 758, 1019, 1154
FokI	GGATG	4 cut(s)	161, 1237, 1379, 1463
FriOI	GRGCYC	3 cut(s)	426, 1029, 1953
Fsp4HI	GCNGC	5 cut(s)	15, 719, 758, 1019, 1154
FspBI	CTAG	5 cut(s)	107, 1022, 1077, 1319, 1604
GlaI	GCGC	1 cut(s)	1335
GluI	GCNGC	5 cut(s)	15, 719, 758, 1019, 1154
GsaI	CCCAGC	2 cut(s)	171, 1140
GsuI	CTGGAG	1 cut(s)	1077
HaeII	RGCGCY	1 cut(s)	1337
HaeIII	GGCC	4 cut(s)	93, 595, 887, 1957
HapII	CCGG	7 cut(s)	94, 671, 843, 987, 1919, 1954, 1982
HgaI	GACGC	1 cut(s)	1073
HhaI	GCGC	1 cut(s)	1336
Hin1I	GRCGYC	1 cut(s)	1334
Hin6I	GCGC	1 cut(s)	1334
HinP1I	GCGC	1 cut(s)	1334
HinfI	GANTC	3 cut(s)	667, 1090, 1562
HpaII	CCGG	7 cut(s)	94, 671, 843, 987, 1919, 1954, 1982
Hpy166II	GTNNAC	5 cut(s)	132, 331, 1210, 1408, 1878
Hpy8I	GTNNAC	5 cut(s)	132, 331, 1210, 1408, 1878
HpyAV	CCTTC	5 cut(s)	70, 79, 985, 1321, 1735
HpyCH4III	ACNGT	7 cut(s)	8, 412, 432, 754, 896, 1237, 1537
HpyCH4IV	ACGT	3 cut(s)	32, 225, 500
HpyCH4V	TGCA	6 cut(s)	4, 416, 757, 1119, 1388, 2028
HpyF10VI	GCNNNNNNNGC	8 cut(s)	20, 709, 718, 934, 1024, 1073, 1142, 1342
HpyF3I	CTNAG	8 cut(s)	126, 135, 205, 645, 1081, 1554, 1835, 2004
HpySE526I	ACGT	3 cut(s)	32, 225, 500
Hsp92I	GRCGYC	1 cut(s)	1334
HspAI	GCGC	1 cut(s)	1334
KasI	GGCGCC	1 cut(s)	1333
KpnI	GGTACC	1 cut(s)	100
Ksp22I	TGATCA	4 cut(s)	543, 1351, 1414, 1795
LguI	GCTCTTC	1 cut(s)	47
LmnI	GCTCC	5 cut(s)	176, 429, 500, 1830, 1956
Lsp1109I	GCAGC	1 cut(s)	769
LweI	GCATC	5 cut(s)	27, 872, 973, 1357, 1914
MaeI	CTAG	5 cut(s)	107, 1022, 1077, 1319, 1604
MaeII	ACGT	3 cut(s)	32, 225, 500
MaeIII	GTNAC	5 cut(s)	557, 1486, 1498, 1526, 1747
MhlI	GDGCHC	5 cut(s)	426, 792, 1029, 1953, 2016
Mly113I	GGCGCC	1 cut(s)	1334
MlyI	GAGTC	1 cut(s)	1084
MmeI	TCCRAC	2 cut(s)	1282, 1746
MroXI	GAANNNNTTC	1 cut(s)	1914
MseI	TTAA	8 cut(s)	474, 738, 777, 1098, 1272, 1934, 1989, 2041
MslI	CAYNNNNRTG	1 cut(s)	752
MspA1I	CMGCKG	1 cut(s)	1598
MspI	CCGG	7 cut(s)	94, 671, 843, 987, 1919, 1954, 1982
MspR9I	CCNGG	4 cut(s)	771, 1176, 1638, 1668
MvaI	CCWGG	4 cut(s)	771, 1176, 1638, 1668
MwoI	GCNNNNNNNGC	8 cut(s)	20, 709, 718, 934, 1024, 1073, 1142, 1342
NarI	GGCGCC	1 cut(s)	1334
NcoI	CCATGG	2 cut(s)	18, 1881
NheI	GCTAGC	1 cut(s)	1076
NlaIV	GGNNCC	9 cut(s)	98, 675, 691, 948, 1285, 1335, 1723, 1832, 1841
NmeAIII	GCCGAG	2 cut(s)	69, 305
NmuCI	GTSAC	2 cut(s)	1486, 1747
NspI	RCATGY	2 cut(s)	1136, 2020
OliI	CACNNNNGTG	1 cut(s)	752
PciSI	GCTCTTC	1 cut(s)	47
PdmI	GAANNNNTTC	1 cut(s)	1914
PfeI	GAWTC	2 cut(s)	667, 1562
PkrI	GCNGC	5 cut(s)	16, 720, 759, 1020, 1155
PleI	GAGTC	1 cut(s)	1084
PluTI	GGCGCC	1 cut(s)	1337
PpsI	GAGTC	1 cut(s)	1084
Ppu21I	YACGTR	1 cut(s)	226
PsiI	TTATAA	1 cut(s)	1758
Psp124BI	GAGCTC	2 cut(s)	426, 1953
Psp1406I	AACGTT	1 cut(s)	32
Psp6I	CCWGG	4 cut(s)	769, 1174, 1636, 1666
PspEI	GGTNACC	1 cut(s)	1486
PspFI	CCCAGC	2 cut(s)	167, 1136
PspGI	CCWGG	4 cut(s)	769, 1174, 1636, 1666
PspN4I	GGNNCC	9 cut(s)	98, 675, 691, 948, 1285, 1335, 1723, 1832, 1841
PspPI	GGNCC	6 cut(s)	139, 594, 728, 767, 845, 946
PvuII	CAGCTG	1 cut(s)	1598
RsaI	GTAC	7 cut(s)	98, 587, 908, 965, 1257, 1378, 1877
RsaNI	GTAC	7 cut(s)	97, 586, 907, 964, 1256, 1377, 1876
RseI	CAYNNNNRTG	1 cut(s)	752
SacI	GAGCTC	2 cut(s)	426, 1953
SapI	GCTCTTC	1 cut(s)	47
SaqAI	TTAA	8 cut(s)	474, 738, 777, 1098, 1272, 1934, 1989, 2041
SatI	GCNGC	5 cut(s)	15, 719, 758, 1019, 1154
Sau96I	GGNCC	6 cut(s)	139, 594, 728, 767, 845, 946
SchI	GAGTC	1 cut(s)	1084
ScrFI	CCNGG	4 cut(s)	771, 1176, 1638, 1668
SduI	GDGCHC	5 cut(s)	426, 792, 1029, 1953, 2016
SfaNI	GCATC	5 cut(s)	27, 872, 973, 1357, 1914
SfoI	GGCGCC	1 cut(s)	1335
SinI	GGWCC	5 cut(s)	139, 728, 767, 845, 946
SmiMI	CAYNNNNRTG	1 cut(s)	752
SmlI	CTYRAG	1 cut(s)	684
SmoI	CTYRAG	1 cut(s)	684
SnaBI	TACGTA	1 cut(s)	226
SsiI	CCGC	4 cut(s)	719, 1019, 1153, 1281
SspDI	GGCGCC	1 cut(s)	1333
SspMI	CTAG	5 cut(s)	107, 1022, 1077, 1319, 1604
SstI	GAGCTC	2 cut(s)	426, 1953
StyD4I	CCNGG	4 cut(s)	769, 1174, 1636, 1666
StyI	CCWWGG	5 cut(s)	18, 285, 597, 1517, 1881
TaaI	ACNGT	7 cut(s)	8, 412, 432, 754, 896, 1237, 1537
TaiI	ACGT	3 cut(s)	35, 228, 503
TaqI	TCGA	9 cut(s)	245, 303, 658, 707, 838, 866, 1232, 1443, 1971
TaqII	GACCGA	4 cut(s)	445, 716, 1049, 1574
TatI	WGTACW	3 cut(s)	585, 906, 1255
TauI	GCSGC	3 cut(s)	721, 1021, 1156
TfiI	GAWTC	2 cut(s)	667, 1562
Tru1I	TTAA	8 cut(s)	474, 738, 777, 1098, 1272, 1934, 1989, 2041
Tru9I	TTAA	8 cut(s)	474, 738, 777, 1098, 1272, 1934, 1989, 2041
TscAI	CASTG	4 cut(s)	435, 618, 757, 1165
TseFI	GTSAC	2 cut(s)	1486, 1747
TseI	GCWGC	2 cut(s)	14, 757
Tsp45I	GTSAC	2 cut(s)	1486, 1747
TspDTI	ATGAA	3 cut(s)	645, 907, 1880
TspGWI	ACGGA	2 cut(s)	337, 780
TspRI	CASTG	4 cut(s)	435, 618, 757, 1165
VpaK11BI	GGWCC	5 cut(s)	139, 728, 767, 845, 946
XagI	CCTNNNNNAGG	1 cut(s)	881
XapI	RAATTY	5 cut(s)	549, 734, 992, 1268, 1575
XceI	RCATGY	2 cut(s)	1136, 2020
XcmI	CCANNNNNNNNNTGG	1 cut(s)	957
XmiI	GTMKAC	1 cut(s)	1407
XmnI	GAANNNNTTC	1 cut(s)	1914
XspI	CTAG	5 cut(s)	107, 1022, 1077, 1319, 1604

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.