Prupe.1G300200_v2.0.a1

Protein of unknown function (DUF1262)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001480
Physical Location & Seq
Forward (+)
29496225 .. 29498058
1834 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G300200.1

Sequence Viewer

Length: 1182 bp
ATGTATGTGACAAAGCCTCTGTCTCTGTATAGAAGGTCTCCTCAGTCACTGTCGTTGCCACCACCGGAAGGGCCAAATTCTGGTTATCTTGTTCTCCATGACGACGAATCTGTGGAGATAACATGTTGCGGATGCGCTGATGATCAGGTTAAAGACCTGCCTTTCCCTCAGAACAAGGATCTAACAGTTGGATATGGCTCAGATGATGACGAAGTTACATTCATCCCAGTGCTTAGTCAGCCCTTATCTTCCAATAGATACCATGTGATACTTCGGACAGGGAAGCATAAAGGGGAAGCGTGCACAAACTCAAGGGAAGAGGACATGGAGATTGTCTGTTGCGGCTGTACCAATGTTCCAGATGCTAAACCAAAACCACTGGAACCATCAGACGTAAATCAGCAAGTTGAGATCGTTCCTAGGGAGCGTGACAGGGGTTGCTTTGTTGCCAAGTCTGTTGATCCAGATGGGTTTCCTCCTTCCTTCTTGAGAAGAAAGGGGTGGACTGTGACCATGCACACACCCCGTCATTACCGATTGGGTGAAGCCTCAGGACTCAACTCTTCACTACGTGCAAGCCTTCCGGGGTTCGATTTTCCATTATCACATGACTGCTCTGAAGCTGTGTTTGTTGGTAAGTGGTATTGTCCTTTCATGTTTATCAAGGAAGGAGGGGTGAAGCTGAAGGACCAAATGAAAAAATGCATGTTCTATGAGATTAGTCTTGAGCAAAGATGGGAAAAGATTTTCGATAGCATTAATGAAAATATTGAGGTAAAAAATAAAGGTGCTGTGTTTGTGGATGCCTTTGTTCAAAGAGAGGTGGTTTTTGTTGGTGGAAGTGAAGCTATTTGGGATGAAAGAAATGTGAGTGGTGAAGGGTTCATGTTGTTTAAGAGTTTTGATGGTGTGGGACGAGAAACAAGTGTGGGATTGAGCATGAAAATTGTAGAGAGAATGAAATGGGAACAAGAAAGAGTTGGATGGGTTGGTGGGAATGAAAGACGAGTGAAAGTGGAGAGAGTAGAAGAGTTTGGGGGGACAGGAGGCAGGTGGAAGAGATTTGGTTGTTATGTGTTGGTAGAGAGGTTTGTCTTGAAGAGAATGTCAATGAATGGAAGCTTAGCACTACTCGCATATGATTTCAAGCACACACACCAGATTAGGAGCAAATGGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1262

Protein Analysis

394

Amino Acids

44.65

Weight (kDa)

6.3

Isoelectric Point (pI)

48.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1041
Acc36I ACCTGC 2 cut(s) 165, 1041
AccB7I CCANNNNNTGG 1 cut(s) 80
AciI CCGC 2 cut(s) 129, 342
AclWI GGATC 2 cut(s) 186, 455
AcsI RAATTY 1 cut(s) 76
AcuI CTGAAG 2 cut(s) 639, 704
AdeI CACNNNGTG 1 cut(s) 572
AfaI GTAC 1 cut(s) 349
AfiI CCNNNNNNNGG 2 cut(s) 68, 80
AflIII ACRYGT 1 cut(s) 122
AgsI TTSAA 3 cut(s) 815, 1099, 1147
AluBI AGCT 4 cut(s) 623, 682, 848, 1122
AluI AGCT 4 cut(s) 623, 682, 848, 1122
Alw21I GWGCWC 1 cut(s) 305
Alw26I GTCTC 2 cut(s) 27, 42
Alw44I GTGCAC 1 cut(s) 301
AlwI GGATC 2 cut(s) 186, 455
AlwNI CAGNNNCTG 1 cut(s) 49
AoxI GGCC 1 cut(s) 71
ApaLI GTGCAC 1 cut(s) 301
ApoI RAATTY 1 cut(s) 76
ArsI GACNNNNNNTTYG 1 cut(s) 37
AseI ATTAAT 1 cut(s) 759
AspA2I CCTAGG 1 cut(s) 419
AspLEI GCGC 1 cut(s) 137
AspS9I GGNCC 2 cut(s) 71, 688
AsuC2I CCSGG 1 cut(s) 585
AsuHPI GGTGA 3 cut(s) 554, 688, 887
AvaII GGWCC 1 cut(s) 688
AvrII CCTAGG 1 cut(s) 419
AxyI CCTNAGG 1 cut(s) 550
BaeGI GKGCMC 1 cut(s) 305
Bbv12I GWGCWC 1 cut(s) 305
BccI CCATC 5 cut(s) 394, 461, 729, 899, 978
BclI TGATCA 1 cut(s) 142
BcnI CCSGG 1 cut(s) 585
BcoDI GTCTC 2 cut(s) 27, 42
BfaI CTAG 1 cut(s) 420
BfuAI ACCTGC 2 cut(s) 165, 1041
BisI GCNGC 1 cut(s) 343
BlnI CCTAGG 1 cut(s) 419
BlpI GCTNAGC 1 cut(s) 1123
BlsI GCNGC 1 cut(s) 344
Bme1390I CCNGG 1 cut(s) 585
Bme18I GGWCC 1 cut(s) 688
BmgT120I GGNCC 2 cut(s) 71, 688
BmiI GGNNCC 1 cut(s) 384
BmrFI CCNGG 1 cut(s) 585
BmrI ACTGGG 1 cut(s) 221
BmsI GCATC 3 cut(s) 122, 352, 793
BmuI ACTGGG 1 cut(s) 221
Bpu1102I GCTNAGC 1 cut(s) 1123
BpuEI CTTGAG 3 cut(s) 295, 508, 746
BpuMI CCSGG 1 cut(s) 585
BsaAI YACGTR 1 cut(s) 572
BsaI GGTCTC 1 cut(s) 42
BsaJI CCNNGG 2 cut(s) 419, 584
BsaWI WCCGGW 1 cut(s) 64
Bsc4I CCNNNNNNNGG 2 cut(s) 68, 80
Bse1I ACTGG 2 cut(s) 227, 384
Bse21I CCTNAGG 1 cut(s) 550
BseDI CCNNGG 2 cut(s) 419, 584
BseGI GGATG 5 cut(s) 137, 222, 808, 862, 989
BseLI CCNNNNNNNGG 2 cut(s) 68, 80
BseMII CTCAG 4 cut(s) 56, 182, 213, 564
BseNI ACTGG 2 cut(s) 227, 384
BseRI GAGGAG 1 cut(s) 30
BseSI GKGCMC 1 cut(s) 305
BshFI GGCC 1 cut(s) 73
BsiHKAI GWGCWC 1 cut(s) 305
BsiSI CCGG 2 cut(s) 65, 584
BslFI GGGAC 2 cut(s) 927, 1054
BslI CCNNNNNNNGG 2 cut(s) 68, 80
BsmAI GTCTC 2 cut(s) 27, 42
BsmFI GGGAC 2 cut(s) 927, 1054
BsnI GGCC 1 cut(s) 73
Bso31I GGTCTC 1 cut(s) 42
Bsp1286I GDGCHC 1 cut(s) 305
Bsp143I GATC 4 cut(s) 142, 178, 411, 460
Bsp1720I GCTNAGC 1 cut(s) 1123
BspACI CCGC 2 cut(s) 129, 342
BspANI GGCC 1 cut(s) 73
BspCNI CTCAG 4 cut(s) 55, 181, 212, 563
BspLI GGNNCC 1 cut(s) 384
BspMI ACCTGC 2 cut(s) 165, 1041
BspPI GGATC 2 cut(s) 186, 455
BspTNI GGTCTC 1 cut(s) 42
BsrI ACTGG 2 cut(s) 227, 384
BssECI CCNNGG 2 cut(s) 419, 584
BssMI GATC 4 cut(s) 142, 178, 411, 460
BssT1I CCWWGG 1 cut(s) 419
Bst4CI ACNGT 3 cut(s) 51, 187, 508
Bst6I CTCTTC 5 cut(s) 312, 568, 1023, 1052, 1094
BstBAI YACGTR 1 cut(s) 572
BstC8I GCNNGC 2 cut(s) 301, 577
BstDEI CTNAG 6 cut(s) 42, 168, 199, 233, 550, 1123
BstF5I GGATG 5 cut(s) 137, 222, 808, 862, 989
BstHHI GCGC 1 cut(s) 137
BstKTI GATC 4 cut(s) 145, 181, 414, 463
BstMAI GTCTC 2 cut(s) 27, 42
BstMBI GATC 4 cut(s) 142, 178, 411, 460
BstMWI GCNNNNNNNGC 2 cut(s) 238, 1133
BstNSI RCATGY 2 cut(s) 126, 709
BstSCI CCNGG 1 cut(s) 583
BstSLI GKGCMC 1 cut(s) 305
BstX2I RGATCY 1 cut(s) 178
BstYI RGATCY 1 cut(s) 178
Bsu36I CCTNAGG 1 cut(s) 550
BsuRI GGCC 1 cut(s) 73
BtsCI GGATG 5 cut(s) 137, 222, 808, 862, 989
BtsIMutI CAGTG 3 cut(s) 47, 234, 377
BveI ACCTGC 2 cut(s) 165, 1041
Cac8I GCNNGC 2 cut(s) 301, 577
CaiI CAGNNNCTG 1 cut(s) 49
CfoI GCGC 1 cut(s) 137
Cfr13I GGNCC 2 cut(s) 71, 688
Csp6I GTAC 1 cut(s) 348
CviQI GTAC 1 cut(s) 348
DdeI CTNAG 6 cut(s) 42, 168, 199, 233, 550, 1123
DpnI GATC 4 cut(s) 144, 180, 413, 462
DpnII GATC 4 cut(s) 142, 178, 411, 460
DraIII CACNNNGTG 1 cut(s) 572
Eam1104I CTCTTC 5 cut(s) 312, 568, 1023, 1052, 1094
EarI CTCTTC 5 cut(s) 312, 568, 1023, 1052, 1094
Eco130I CCWWGG 1 cut(s) 419
Eco31I GGTCTC 1 cut(s) 42
Eco47I GGWCC 1 cut(s) 688
Eco57I CTGAAG 2 cut(s) 639, 704
Eco81I CCTNAGG 1 cut(s) 550
EcoT14I CCWWGG 1 cut(s) 419
EcoT22I ATGCAT 1 cut(s) 707
ErhI CCWWGG 1 cut(s) 419
FaqI GGGAC 2 cut(s) 927, 1054
FauNDI CATATG 1 cut(s) 1138
FbaI TGATCA 1 cut(s) 142
Fnu4HI GCNGC 1 cut(s) 343
FokI GGATG 5 cut(s) 144, 209, 815, 869, 996
Fsp4HI GCNGC 1 cut(s) 343
FspBI CTAG 1 cut(s) 420
GlaI GCGC 1 cut(s) 136
GluI GCNGC 1 cut(s) 343
HaeIII GGCC 1 cut(s) 73
HapII CCGG 2 cut(s) 65, 584
HhaI GCGC 1 cut(s) 137
Hin6I GCGC 1 cut(s) 135
HinP1I GCGC 1 cut(s) 135
HindIII AAGCTT 1 cut(s) 1120
HinfI GANTC 2 cut(s) 107, 555
HpaII CCGG 2 cut(s) 65, 584
HphI GGTGA 3 cut(s) 554, 688, 887
Hpy166II GTNNAC 2 cut(s) 303, 504
Hpy188I TCNGA 5 cut(s) 171, 202, 276, 391, 619
Hpy188III TCNNGA 6 cut(s) 359, 464, 487, 552, 725, 1096
Hpy8I GTNNAC 2 cut(s) 303, 504
Hpy99I CGWCG 1 cut(s) 107
HpyAV CCTTC 8 cut(s) 27, 62, 489, 493, 590, 662, 679, 872
HpyCH4III ACNGT 3 cut(s) 51, 187, 508
HpyCH4IV ACGT 2 cut(s) 393, 571
HpyCH4V TGCA 4 cut(s) 303, 517, 575, 705
HpyF10VI GCNNNNNNNGC 2 cut(s) 238, 1133
HpyF3I CTNAG 6 cut(s) 42, 168, 199, 233, 550, 1123
HpySE526I ACGT 2 cut(s) 393, 571
HspAI GCGC 1 cut(s) 135
Ksp22I TGATCA 1 cut(s) 142
Kzo9I GATC 4 cut(s) 142, 178, 411, 460
LmnI GCTCC 2 cut(s) 424, 1167
LweI GCATC 3 cut(s) 122, 352, 793
MaeI CTAG 1 cut(s) 420
MaeII ACGT 2 cut(s) 393, 571
MaeIII GTNAC 5 cut(s) 7, 45, 214, 428, 508
MalI GATC 4 cut(s) 144, 180, 413, 462
MboI GATC 4 cut(s) 142, 178, 411, 460
MboII GAAGA 7 cut(s) 240, 329, 504, 555, 1040, 1069, 1111
MflI RGATCY 1 cut(s) 178
MhlI GDGCHC 1 cut(s) 305
MluCI AATT 2 cut(s) 76, 945
MlyI GAGTC 1 cut(s) 549
MmeI TCCRAC 2 cut(s) 169, 961
Mph1103I ATGCAT 1 cut(s) 707
MseI TTAA 3 cut(s) 150, 759, 894
MslI CAYNNNNRTG 1 cut(s) 227
MspI CCGG 2 cut(s) 65, 584
MspR9I CCNGG 1 cut(s) 585
MwoI GCNNNNNNNGC 2 cut(s) 238, 1133
NciI CCSGG 1 cut(s) 585
NdeI CATATG 1 cut(s) 1138
NdeII GATC 4 cut(s) 142, 178, 411, 460
NlaIV GGNNCC 1 cut(s) 384
NmuCI GTSAC 4 cut(s) 7, 45, 428, 508
NsiI ATGCAT 1 cut(s) 707
NspI RCATGY 2 cut(s) 126, 709
PaqCI CACCTGC 1 cut(s) 1041
PciI ACATGT 1 cut(s) 122
PfeI GAWTC 1 cut(s) 107
PflMI CCANNNNNTGG 1 cut(s) 80
PkrI GCNGC 1 cut(s) 344
PleI GAGTC 1 cut(s) 549
PpsI GAGTC 1 cut(s) 549
Ppu21I YACGTR 1 cut(s) 572
PscI ACATGT 1 cut(s) 122
PshBI ATTAAT 1 cut(s) 759
PspN4I GGNNCC 1 cut(s) 384
PspPI GGNCC 2 cut(s) 71, 688
PstNI CAGNNNCTG 1 cut(s) 49
PsuI RGATCY 1 cut(s) 178
RsaI GTAC 1 cut(s) 349
RsaNI GTAC 1 cut(s) 348
RseI CAYNNNNRTG 1 cut(s) 227
SaqAI TTAA 3 cut(s) 150, 759, 894
SatI GCNGC 1 cut(s) 343
Sau3AI GATC 4 cut(s) 142, 178, 411, 460
Sau96I GGNCC 2 cut(s) 71, 688
SchI GAGTC 1 cut(s) 549
ScrFI CCNGG 1 cut(s) 585
SduI GDGCHC 1 cut(s) 305
SfaNI GCATC 3 cut(s) 122, 352, 793
SinI GGWCC 1 cut(s) 688
SmiMI CAYNNNNRTG 1 cut(s) 227
SmlI CTYRAG 3 cut(s) 310, 487, 725
SmoI CTYRAG 3 cut(s) 310, 487, 725
Sse9I AATT 2 cut(s) 76, 945
SsiI CCGC 2 cut(s) 129, 342
SspI AATATT 1 cut(s) 769
SspMI CTAG 1 cut(s) 420
StyD4I CCNGG 1 cut(s) 583
StyI CCWWGG 1 cut(s) 419
TaaI ACNGT 3 cut(s) 51, 187, 508
TaiI ACGT 2 cut(s) 396, 574
TaqI TCGA 2 cut(s) 591, 750
TasI AATT 2 cut(s) 76, 945
TauI GCSGC 1 cut(s) 345
TfiI GAWTC 1 cut(s) 107
Tru1I TTAA 3 cut(s) 150, 759, 894
Tru9I TTAA 3 cut(s) 150, 759, 894
TscAI CASTG 3 cut(s) 54, 234, 384
TseFI GTSAC 4 cut(s) 7, 45, 428, 508
Tsp45I GTSAC 4 cut(s) 7, 45, 428, 508
TspRI CASTG 3 cut(s) 54, 234, 384
Van91I CCANNNNNTGG 1 cut(s) 80
VneI GTGCAC 1 cut(s) 301
VpaK11BI GGWCC 1 cut(s) 688
VspI ATTAAT 1 cut(s) 759
XapI RAATTY 1 cut(s) 76
XceI RCATGY 2 cut(s) 126, 709
XmaJI CCTAGG 1 cut(s) 419
XspI CTAG 1 cut(s) 420
Zsp2I ATGCAT 1 cut(s) 707
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.