Prupe.1G300400_v2.0.a1

Protein of unknown function (DUF1262)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001480
Physical Location & Seq
Forward (+)
29507085 .. 29508357
1273 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G300400.1

Sequence Viewer

Length: 1185 bp
ATGTATGTGACAAGGCCTCTGTCTATGTATAGAAGGTCACCTGAGTCACTGTCCTTACCACCCCCAGAGGGGCCAAATTCTGGTTATCTTGTGCTCCATGATGAAGAATCTGATGAGGTATCATGTTGCGGATGCATTGATAACCGGGTTAGAGACACGCCTTTCCCTCAGAATGAAGATCTAACAGTTGGATATGGCTCAGATGACGACCCTGTTGCATTCATTCCAGTGCTCGATCAGCCCTTGTCTTCCAACAGATACCATGTGATCCACCGGAGAGGGAGGCATAAAGGGGAAGCAAGCACAAATTCAAGGGAAGAGGACATGGGGACTGGCTTTTTCAACAGACGCTCTGTTCGAGATGTTAATCCAAAACCGTTGGATCCATCAGACATATATCAGCAAGTTGAGATACTTACTGGGGATAACTACTACAAGGGTAGTTTTACTGCCAAGTCTGTTGCTCCAGATGGGTTTCCTCCTAAATTCTTGAGGACAAAAGGGTGGATTGTGACCAGGAGCACACCTTATGATTACCAATTGGGTGAAGCCCCAGGGCTCAACTCTTCACTACGAGCAAGCCTTCCAGGGTTCGATTTTCCACTATCACATGATTGCTCTGAAGCGGTGTTTGTAGGTAAGTGGTATTGTCCTTTCATGTTTGTCAAGGAAGGAGGGGTGAGGCTGAAGGAACAAATGAAAAAATGCATGTTCTATGAAATACTACTTGAGCAAAGGTGGGAAAAGATTTTCGATAGCGTTAACGAAAATGTTGAGGGGAAAAATAAAGGTGCTGTGTTTGTGGATGCCTTTGCTCAAAGAGAGGTGGTTTTTGTTCGTGGAAGTGAAGCTATTTGGGTTGAAAGAAATGTGAGTGGTGATGGGTTCATGTGGTTTAAGAGTTTTGATGGTGTGGGAGGCGAAACAAGTGTAGGGTTGAGCATGAAAGTTGTGGAGAGAATGAAATGGGAGCAAGAGAGAGTTGGATGGGTTGGTGGAGATGAAAGGCAAGTGAGAGTGGAGAGGGTGGAAGAGTTTGGAGGGACAGGAGGCATGTGGAAGAGATTTGGTTGCTATGTGTTGGTAGAGAGGTTTGTGTTGAAGAGAATGTCTGTGAATGGAAGCTTTGCGCTACTCACATATGATTTCAAGCACACACACCAGATTAGGAGCAAATGGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1262

Protein Analysis

395

Amino Acids

44.99

Weight (kDa)

5.93

Isoelectric Point (pI)

46.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 80
AciI CCGC 2 cut(s) 129, 626
AclWI GGATC 3 cut(s) 262, 377, 390
AcsI RAATTY 3 cut(s) 76, 307, 485
AcuI CTGAAG 2 cut(s) 642, 707
AfiI CCNNNNNNNGG 3 cut(s) 68, 69, 80
AgsI TTSAA 5 cut(s) 312, 343, 863, 1102, 1150
AjnI CCWGG 3 cut(s) 515, 553, 586
AluBI AGCT 2 cut(s) 851, 1125
AluI AGCT 2 cut(s) 851, 1125
Alw21I GWGCWC 3 cut(s) 96, 234, 524
Alw26I GTCTC 1 cut(s) 147
AlwI GGATC 3 cut(s) 262, 377, 390
AoxI GGCC 2 cut(s) 14, 71
ApoI RAATTY 3 cut(s) 76, 307, 485
ArsI GACNNNNNNTTYG 2 cut(s) 339, 371
AspLEI GCGC 1 cut(s) 1132
AspS9I GGNCC 1 cut(s) 71
AsuC2I CCSGG 1 cut(s) 146
AsuHPI GGTGA 4 cut(s) 30, 557, 691, 890
BamHI GGATCC 1 cut(s) 382
BanII GRGCYC 1 cut(s) 561
BbsI GAAGAC 1 cut(s) 240
Bbv12I GWGCWC 3 cut(s) 96, 234, 524
BccI CCATC 5 cut(s) 394, 464, 875, 902, 981
BcgI CGANNNNNNTGC 2 cut(s) 197, 231
BciT130I CCWGG 3 cut(s) 517, 555, 588
BcnI CCSGG 1 cut(s) 146
BcoDI GTCTC 1 cut(s) 147
BglII AGATCT 1 cut(s) 178
Bme1390I CCNGG 4 cut(s) 146, 517, 555, 588
BmgT120I GGNCC 1 cut(s) 71
BmiI GGNNCC 2 cut(s) 72, 384
BmrFI CCNGG 4 cut(s) 146, 517, 555, 588
BmrI ACTGGG 1 cut(s) 429
BmsI GCATC 2 cut(s) 122, 796
BmuI ACTGGG 1 cut(s) 429
BpiI GAAGAC 1 cut(s) 240
BpmI CTGGAG 1 cut(s) 450
BpuEI CTTGAG 2 cut(s) 511, 749
BpuMI CCSGG 1 cut(s) 146
BsaBI GATNNNNATC 1 cut(s) 366
BsaJI CCNNGG 3 cut(s) 553, 554, 587
BsaWI WCCGGW 1 cut(s) 273
Bsc4I CCNNNNNNNGG 3 cut(s) 68, 69, 80
Bse1I ACTGG 3 cut(s) 227, 337, 424
Bse8I GATNNNNATC 1 cut(s) 366
BseBI CCWGG 3 cut(s) 517, 555, 588
BseDI CCNNGG 3 cut(s) 553, 554, 587
BseGI GGATG 3 cut(s) 137, 811, 992
BseJI GATNNNNATC 1 cut(s) 366
BseLI CCNNNNNNNGG 3 cut(s) 68, 69, 80
BseMII CTCAG 3 cut(s) 33, 182, 213
BseNI ACTGG 3 cut(s) 227, 337, 424
BshFI GGCC 2 cut(s) 16, 73
BsiHKAI GWGCWC 3 cut(s) 96, 234, 524
BsiSI CCGG 2 cut(s) 145, 274
BslFI GGGAC 2 cut(s) 343, 1057
BslI CCNNNNNNNGG 3 cut(s) 68, 69, 80
BsmAI GTCTC 1 cut(s) 147
BsmFI GGGAC 2 cut(s) 343, 1057
BsmI GAATGC 1 cut(s) 218
BsnI GGCC 2 cut(s) 16, 73
Bsp1286I GDGCHC 4 cut(s) 96, 234, 524, 561
Bsp143I GATC 4 cut(s) 178, 235, 267, 382
BspACI CCGC 2 cut(s) 129, 626
BspANI GGCC 2 cut(s) 16, 73
BspCNI CTCAG 3 cut(s) 34, 181, 212
BspLI GGNNCC 2 cut(s) 72, 384
BspPI GGATC 3 cut(s) 262, 377, 390
BsrI ACTGG 3 cut(s) 227, 337, 424
BssECI CCNNGG 3 cut(s) 553, 554, 587
BssMI GATC 4 cut(s) 178, 235, 267, 382
Bst2UI CCWGG 3 cut(s) 517, 555, 588
Bst4CI ACNGT 3 cut(s) 51, 187, 378
Bst6I CTCTTC 5 cut(s) 312, 571, 1026, 1055, 1097
BstC8I GCNNGC 2 cut(s) 301, 580
BstDEI CTNAG 3 cut(s) 42, 168, 199
BstEII GGTNACC 1 cut(s) 36
BstF5I GGATG 3 cut(s) 137, 811, 992
BstHHI GCGC 1 cut(s) 1132
BstKTI GATC 4 cut(s) 181, 238, 270, 385
BstMAI GTCTC 1 cut(s) 147
BstMBI GATC 4 cut(s) 178, 235, 267, 382
BstMWI GCNNNNNNNGC 1 cut(s) 238
BstNI CCWGG 3 cut(s) 517, 555, 588
BstNSI RCATGY 2 cut(s) 712, 1057
BstPI GGTNACC 1 cut(s) 36
BstSCI CCNGG 4 cut(s) 144, 515, 553, 586
BstV2I GAAGAC 1 cut(s) 240
BstX2I RGATCY 2 cut(s) 178, 382
BstYI RGATCY 2 cut(s) 178, 382
BsuRI GGCC 2 cut(s) 16, 73
BtsCI GGATG 3 cut(s) 137, 811, 992
BtsIMutI CAGTG 2 cut(s) 47, 234
Cac8I GCNNGC 2 cut(s) 301, 580
CfoI GCGC 1 cut(s) 1132
Cfr13I GGNCC 1 cut(s) 71
CseI GACGC 1 cut(s) 357
DdeI CTNAG 3 cut(s) 42, 168, 199
DpnI GATC 4 cut(s) 180, 237, 269, 384
DpnII GATC 4 cut(s) 178, 235, 267, 382
Eam1104I CTCTTC 5 cut(s) 312, 571, 1026, 1055, 1097
EarI CTCTTC 5 cut(s) 312, 571, 1026, 1055, 1097
Eco147I AGGCCT 1 cut(s) 16
Eco24I GRGCYC 1 cut(s) 561
Eco57I CTGAAG 2 cut(s) 642, 707
Eco91I GGTNACC 1 cut(s) 36
EcoO65I GGTNACC 1 cut(s) 36
EcoRII CCWGG 3 cut(s) 515, 553, 586
EcoT22I ATGCAT 2 cut(s) 137, 710
EcoT38I GRGCYC 1 cut(s) 561
FaqI GGGAC 2 cut(s) 343, 1057
FauNDI CATATG 1 cut(s) 1141
FokI GGATG 3 cut(s) 144, 818, 999
FriOI GRGCYC 1 cut(s) 561
GlaI GCGC 1 cut(s) 1131
GsuI CTGGAG 1 cut(s) 450
HaeIII GGCC 2 cut(s) 16, 73
HapII CCGG 2 cut(s) 145, 274
HgaI GACGC 1 cut(s) 357
HhaI GCGC 1 cut(s) 1132
Hin6I GCGC 1 cut(s) 1130
HinP1I GCGC 1 cut(s) 1130
HincII GTYRAC 1 cut(s) 763
HindII GTYRAC 1 cut(s) 763
HindIII AAGCTT 1 cut(s) 1123
HinfI GANTC 2 cut(s) 44, 107
HpaI GTTAAC 1 cut(s) 763
HpaII CCGG 2 cut(s) 145, 274
HphI GGTGA 4 cut(s) 30, 557, 691, 890
Hpy166II GTNNAC 1 cut(s) 763
Hpy188I TCNGA 5 cut(s) 112, 171, 202, 391, 622
Hpy188III TCNNGA 3 cut(s) 359, 467, 490
Hpy8I GTNNAC 1 cut(s) 763
HpyAV CCTTC 4 cut(s) 27, 593, 665, 682
HpyCH4III ACNGT 3 cut(s) 51, 187, 378
HpyCH4V TGCA 3 cut(s) 135, 218, 708
HpyF10VI GCNNNNNNNGC 1 cut(s) 238
HpyF3I CTNAG 3 cut(s) 42, 168, 199
HspAI GCGC 1 cut(s) 1130
KspAI GTTAAC 1 cut(s) 763
Kzo9I GATC 4 cut(s) 178, 235, 267, 382
LmnI GCTCC 5 cut(s) 99, 469, 519, 970, 1170
LweI GCATC 2 cut(s) 122, 796
MaeIII GTNAC 4 cut(s) 7, 36, 45, 511
MalI GATC 4 cut(s) 180, 237, 269, 384
MboI GATC 4 cut(s) 178, 235, 267, 382
MboII GAAGA 8 cut(s) 116, 188, 240, 329, 558, 1043, 1072, 1114
MfeI CAATTG 1 cut(s) 539
MflI RGATCY 2 cut(s) 178, 382
MhlI GDGCHC 4 cut(s) 96, 234, 524, 561
MluCI AATT 4 cut(s) 76, 307, 485, 539
MlyI GAGTC 1 cut(s) 53
MmeI TCCRAC 4 cut(s) 169, 276, 360, 964
Mph1103I ATGCAT 2 cut(s) 137, 710
MseI TTAA 3 cut(s) 366, 762, 897
MslI CAYNNNNRTG 1 cut(s) 227
MspI CCGG 2 cut(s) 145, 274
MspR9I CCNGG 4 cut(s) 146, 517, 555, 588
MunI CAATTG 1 cut(s) 539
Mva1269I GAATGC 1 cut(s) 218
MvaI CCWGG 3 cut(s) 517, 555, 588
MwoI GCNNNNNNNGC 1 cut(s) 238
NciI CCSGG 1 cut(s) 146
NdeI CATATG 1 cut(s) 1141
NdeII GATC 4 cut(s) 178, 235, 267, 382
NlaIV GGNNCC 2 cut(s) 72, 384
NmuCI GTSAC 4 cut(s) 7, 36, 45, 511
NsiI ATGCAT 2 cut(s) 137, 710
NspI RCATGY 2 cut(s) 712, 1057
PasI CCCWGGG 1 cut(s) 554
PceI AGGCCT 1 cut(s) 16
PcsI WCGNNNNNNNCGW 1 cut(s) 355
PctI GAATGC 1 cut(s) 218
PfeI GAWTC 1 cut(s) 107
PflMI CCANNNNNTGG 1 cut(s) 80
PleI GAGTC 1 cut(s) 52
PpsI GAGTC 1 cut(s) 52
Psp6I CCWGG 3 cut(s) 515, 553, 586
PspEI GGTNACC 1 cut(s) 36
PspGI CCWGG 3 cut(s) 515, 553, 586
PspN4I GGNNCC 2 cut(s) 72, 384
PspPI GGNCC 1 cut(s) 71
PsuI RGATCY 2 cut(s) 178, 382
RseI CAYNNNNRTG 1 cut(s) 227
SaqAI TTAA 3 cut(s) 366, 762, 897
Sau3AI GATC 4 cut(s) 178, 235, 267, 382
Sau96I GGNCC 1 cut(s) 71
SchI GAGTC 1 cut(s) 53
ScrFI CCNGG 4 cut(s) 146, 517, 555, 588
SduI GDGCHC 4 cut(s) 96, 234, 524, 561
SfaNI GCATC 2 cut(s) 122, 796
SmiMI CAYNNNNRTG 1 cut(s) 227
SmlI CTYRAG 2 cut(s) 490, 728
SmoI CTYRAG 2 cut(s) 490, 728
Sse9I AATT 4 cut(s) 76, 307, 485, 539
SseBI AGGCCT 1 cut(s) 16
SsiI CCGC 2 cut(s) 129, 626
StuI AGGCCT 1 cut(s) 16
StyD4I CCNGG 4 cut(s) 144, 515, 553, 586
TaaI ACNGT 3 cut(s) 51, 187, 378
TaqI TCGA 4 cut(s) 234, 358, 594, 753
TasI AATT 4 cut(s) 76, 307, 485, 539
TfiI GAWTC 1 cut(s) 107
Tru1I TTAA 3 cut(s) 366, 762, 897
Tru9I TTAA 3 cut(s) 366, 762, 897
TscAI CASTG 2 cut(s) 54, 234
TseFI GTSAC 4 cut(s) 7, 36, 45, 511
Tsp45I GTSAC 4 cut(s) 7, 36, 45, 511
TspRI CASTG 2 cut(s) 54, 234
Van91I CCANNNNNTGG 1 cut(s) 80
XapI RAATTY 3 cut(s) 76, 307, 485
XceI RCATGY 2 cut(s) 712, 1057
Zsp2I ATGCAT 2 cut(s) 137, 710
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.