Rh2CG554700

Protein of unknown function (DUF1262)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
73302352 .. 73302732
381 bp
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UTR
Exon/CDS
Intron
Rh2CG554700.1

Sequence Viewer

Length: 381 bp
ATGTATGTGACAAAACCTCTTTCCATGTACCGGAAATCTCCAAACACTCTTTCCATACAGCCACCAGATGCTCCTTATTCCGGTCATTTAGTAGTTACAGATGAAGAAGCAGAAGCCCAAGACTCATGTTGTTGGGGTATCTGCAAGCGTGACCAGATTAAGCAACTACCATTTCCACAGGACAAGCTACTCACCGTTGTTTATACATCGGATTACCAAGAAGCATATACCACCAAAGTTTGGTTCATCCCGGTTCTTGATCAGCCTCTATCTTCTAATTGCTACTATGTTATCAAAGCAAATGGAAGACACAAAGGGTTTGCTCTTATTATACTTATATTTCATCTCATAAACTTTTTCCATGCACTGTTTTCTAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

126

Amino Acids

14.51

Weight (kDa)

7.67

Isoelectric Point (pI)

41.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1262 PF06880 23 - 108 9.5e-36 Protein of unknown function (DUF1262)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 240
AfaI GTAC 1 cut(s) 29
AfiI CCNNNNNNNGG 3 cut(s) 30, 80, 240
AjuI GAANNNNNNNTTGG 4 cut(s) 34, 66, 227, 259
AluBI AGCT 1 cut(s) 187
AluI AGCT 1 cut(s) 187
AsuC2I CCSGG 1 cut(s) 251
AsuHPI GGTGA 1 cut(s) 184
BbsI GAAGAC 1 cut(s) 313
BclI TGATCA 1 cut(s) 259
BcnI CCSGG 1 cut(s) 251
Bme1390I CCNGG 1 cut(s) 251
BmrFI CCNGG 1 cut(s) 251
BmsI GCATC 1 cut(s) 58
BpiI GAAGAC 1 cut(s) 313
BpuMI CCSGG 1 cut(s) 251
BsaWI WCCGGW 2 cut(s) 30, 80
Bsc4I CCNNNNNNNGG 3 cut(s) 30, 80, 240
BseGI GGATG 1 cut(s) 246
BseLI CCNNNNNNNGG 3 cut(s) 30, 80, 240
BsiSI CCGG 3 cut(s) 31, 81, 251
BslI CCNNNNNNNGG 3 cut(s) 30, 80, 240
Bsp143I GATC 1 cut(s) 259
BssMI GATC 1 cut(s) 259
Bst4CI ACNGT 2 cut(s) 196, 369
BstC8I GCNNGC 1 cut(s) 146
BstDEI CTNAG 1 cut(s) 375
BstF5I GGATG 1 cut(s) 246
BstKTI GATC 1 cut(s) 262
BstMBI GATC 1 cut(s) 259
BstSCI CCNGG 1 cut(s) 249
BstV2I GAAGAC 1 cut(s) 313
BtsCI GGATG 1 cut(s) 246
BtsIMutI CAGTG 1 cut(s) 365
Cac8I GCNNGC 1 cut(s) 146
Csp6I GTAC 1 cut(s) 28
CviAII CATG 3 cut(s) 25, 126, 362
CviJI RGCY 4 cut(s) 61, 116, 187, 265
CviKI_1 RGCY 4 cut(s) 61, 116, 187, 265
CviQI GTAC 1 cut(s) 28
DdeI CTNAG 1 cut(s) 375
DpnI GATC 1 cut(s) 261
DpnII GATC 1 cut(s) 259
FaeI CATG 3 cut(s) 28, 129, 365
FatI CATG 3 cut(s) 24, 125, 361
FbaI TGATCA 1 cut(s) 259
FokI GGATG 1 cut(s) 233
HapII CCGG 3 cut(s) 31, 81, 251
Hin1II CATG 3 cut(s) 28, 129, 365
HinfI GANTC 1 cut(s) 122
HpaII CCGG 3 cut(s) 31, 81, 251
HphI GGTGA 1 cut(s) 184
Hpy188I TCNGA 1 cut(s) 211
Hpy188III TCNNGA 1 cut(s) 257
HpyCH4III ACNGT 2 cut(s) 196, 369
HpyCH4V TGCA 2 cut(s) 144, 365
HpyF3I CTNAG 1 cut(s) 375
Hsp92II CATG 3 cut(s) 28, 129, 365
Ksp22I TGATCA 1 cut(s) 259
Kzo9I GATC 1 cut(s) 259
LmnI GCTCC 1 cut(s) 76
LpnPI CCDG 6 cut(s) 44, 78, 94, 164, 167, 264
LweI GCATC 1 cut(s) 58
MaeIII GTNAC 3 cut(s) 7, 94, 149
MalI GATC 1 cut(s) 261
MboI GATC 1 cut(s) 259
MboII GAAGA 3 cut(s) 116, 264, 318
MluCI AATT 1 cut(s) 277
MlyI GAGTC 1 cut(s) 116
MnlI CCTC 2 cut(s) 27, 276
MseI TTAA 1 cut(s) 159
MspI CCGG 3 cut(s) 31, 81, 251
MspR9I CCNGG 1 cut(s) 251
NciI CCSGG 1 cut(s) 251
NdeII GATC 1 cut(s) 259
NlaIII CATG 3 cut(s) 28, 129, 365
NmuCI GTSAC 2 cut(s) 7, 149
PflMI CCANNNNNTGG 1 cut(s) 240
PleI GAGTC 1 cut(s) 116
PpsI GAGTC 1 cut(s) 116
RsaI GTAC 1 cut(s) 29
RsaNI GTAC 1 cut(s) 28
SaqAI TTAA 1 cut(s) 159
Sau3AI GATC 1 cut(s) 259
SchI GAGTC 1 cut(s) 116
ScrFI CCNGG 1 cut(s) 251
SetI ASST 2 cut(s) 19, 189
SfaNI GCATC 1 cut(s) 58
Sse9I AATT 1 cut(s) 277
StyD4I CCNGG 1 cut(s) 249
TaaI ACNGT 2 cut(s) 196, 369
TasI AATT 1 cut(s) 277
Tru1I TTAA 1 cut(s) 159
Tru9I TTAA 1 cut(s) 159
TscAI CASTG 1 cut(s) 372
TseFI GTSAC 2 cut(s) 7, 149
Tsp45I GTSAC 2 cut(s) 7, 149
TspDTI ATGAA 3 cut(s) 117, 235, 332
TspRI CASTG 1 cut(s) 372
Van91I CCANNNNNTGG 1 cut(s) 240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.