Prupe.8G114200_v2.0.a1

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000590
Physical Location & Seq
Forward (+)
14217947 .. 14219866
1920 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G114200.1

Sequence Viewer

Length: 1062 bp
ATGGGAGAGGTTGATCCAGCTTTCATCCAAGACCCTGATCACAGGCCTAAACTCTCCATCACCGAAGTCGAAGGCATACCCTTGATTGACCTGACTCCGATTATCTCCCCAGACTCCATTTCCGACCCTAAAGCTATTGAAGCGGTTGTTAGAGAAATAGGCAATGCATGCAGGGACTGGGGGTTCTTCCAAGTGATCAATCATGGAGTAGTATTGGATAAGCTCCGAAAGATTGAGACTGCTGCGAGGAAATTCTTTGCTCTGCCTTTGGAGGAAAAGAGGAAGATTAGGAGGGGTGAAAAAAGCGTGTTAGGTTACTATGACAGTGAACGTACCAAGAATGTCAGAGACTGGAAGGAGGTGTTTGATTTCACAGTGGAGGAGCCTACTCTAGTCCCGGCTTCGCCCGACCCTGAGGACAAGGAAGAGACAGAGTGGTATAACCAATGGCCTGAGCACCCTCCAGAACTAAGGGAGGTCTGTGAAGAATATGCTCGAGAAGTCGAAAAGCTAGCTCTGAAGTTGATGGGACTTATTGCCTTAAGCCTAGGCTTGCCAGAAAACAGGTTCAGCAGCTACTTCAAAGACCAAACAACTTCTATTAGACTCAATCACTATCCAGCTTGTCCTTCCCCTCAGCTAGCTCTTGGTGTTGGTCGTCACAAGGATGGTGGTGCTTTAACCGTGCTAGCTCAAGATGACGTTGGAGGATTGGAAGTGAGGAGAAAAACAGATGGAGCATGGATTCGGGTTAAGCCCACCCCAAATGCCTATATCATCAATGTTGGTGACAGTATCCAGGTTTGGACCAATGAAAAATATCAGAGTGTGGAACATAGGGTGATGGTAAACTCAGAGAAGGAAAGGTTTTCTATCCCTTACTTCCTCAACCCATCCCACTACACCATAATCAAGCCTTTGGAGGAGCTAATAAATGAACAAAACCTTGCCAAGTATAGGCCCTACAGCTGGGGCAAGTTTATGACTAACAGAAAGCTCAGTAATTTCAAGAAACTCAATGTTGAAAACATCCAAATTCATCATTTCAGGGTATCGGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

354

Amino Acids

40.7

Weight (kDa)

5.94

Isoelectric Point (pI)

41.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000590)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G19000 AT3G19000
fragaria_vesca FvH4_2g07071 FvH4_2g07080 FvH4_2g07080 FvH4_2g07081 FvH4_2g07082 FvH4_2g07082
malus_domestica MD05G1074000.v1.1 MD10G1088100.v1.1 MD10G1088200.v1.1 MD14G1207600.v1.1
prunus_persica Prupe.8G114100_v2.0.a1 Prupe.8G114200_v2.0.a1 Prupe.8G114300_v2.0.a1 Prupe.8G114500_v2.0.a1 Prupe.8G114800_v2.0.a1 Prupe.8G115100_v2.0.a1
pyrus_communis pycom05g06640 pycom05g06660 pycom05g06670 pycom10g07050
rosa_chinensis RchiOBHm_Chr6g0244141 RchiOBHm_Chr6g0259511 RchiOBHm_Chr6g0259521 RchiOBHm_Chr6g0259531 RchiOBHm_Chr6g0259551 RchiOBHm_Chr6g0259561
rosa_laevigata RLG00000014522 RLG00000014523 RLG00000014524 RLG00000014525 RLG00000014526 RLG00000014527
rosa_multiflora Rmu_ssc0000050.1_g000019 Rmu_ssc0000050.1_g000020 Rmu_ssc0000050.1_g000026 Rmu_ssc0000050.1_g000027 Rmu_ssc0000050.1_g000028
rosa_roxburghii Rroxscaffold_7G00206780 Rroxscaffold_7G00206790 Rroxscaffold_7G00206850 Rroxscaffold_7G00206860 Rroxscaffold_7G00206870 Rroxscaffold_7G00206880
rosa_rugosa Rorug05G0589100 Rorug05G0589200.1 Rorug05G0589300 Rorug05G0589400 Rorug05G0589500 Rorug05G0589600
rosa_samantha Rh4CG096000 Rh5BG231700 Rh6AG104900 Rh6AG105000 Rh6AG105100 Rh6AG105500 Rh6AG105600 Rh6BG098500 Rh6BG098700 Rh6BG098800 Rh6BG099000 Rh6BG099100 Rh6CG094200 Rh6CG094300 Rh6CG094400 Rh6CG094500 Rh6CG094600 Rh6DG088300 Rh6DG088400 Rh6DG088500 Rh6DG088600 Rh6DG088700
rosa_wichuraiana Rw0G014270 Rw0G014280 Rw0G014290 Rw6G009080 Rw6G009090 Rw6G009100 Rw6G009110 Rw6G009120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 143
AclWI GGATC 1 cut(s) 8
AcsI RAATTY 2 cut(s) 251, 1035
AcuI CTGAAG 1 cut(s) 539
AfaI GTAC 1 cut(s) 334
AfiI CCNNNNNNNGG 2 cut(s) 957, 969
AflII CTTAAG 1 cut(s) 541
AgsI TTSAA 4 cut(s) 140, 583, 1009, 1025
AjnI CCWGG 1 cut(s) 798
AloI GAACNNNNNNTCC 2 cut(s) 167, 199
Alw21I GWGCWC 1 cut(s) 459
Alw26I GTCTC 3 cut(s) 230, 342, 422
AlwI GGATC 1 cut(s) 8
AlwNI CAGNNNCTG 2 cut(s) 177, 351
Ama87I CYCGRG 1 cut(s) 495
AoxI GGCC 3 cut(s) 44, 449, 959
ApeKI GCWGC 2 cut(s) 242, 573
ApoI RAATTY 2 cut(s) 251, 1035
AspA2I CCTAGG 1 cut(s) 547
AspS9I GGNCC 2 cut(s) 807, 960
AsuC2I CCSGG 1 cut(s) 398
AsuHPI GGTGA 4 cut(s) 52, 308, 800, 853
AsuNHI GCTAGC 3 cut(s) 511, 640, 688
AvaI CYCGRG 1 cut(s) 495
AvaII GGWCC 1 cut(s) 807
AvrII CCTAGG 1 cut(s) 547
AxyI CCTNAGG 1 cut(s) 414
Bbv12I GWGCWC 1 cut(s) 459
BbvCI CCTCAGC 1 cut(s) 636
BbvI GCAGC 2 cut(s) 229, 585
BccI CCATC 6 cut(s) 65, 520, 662, 728, 838, 901
BciT130I CCWGG 1 cut(s) 800
BciVI GTATCC 1 cut(s) 806
BclI TGATCA 2 cut(s) 37, 195
BcnI CCSGG 1 cut(s) 398
BcoDI GTCTC 3 cut(s) 230, 342, 422
BfaI CTAG 5 cut(s) 392, 512, 548, 641, 689
BfmI CTRYAG 1 cut(s) 964
BfrI CTTAAG 1 cut(s) 541
BfuI GTATCC 1 cut(s) 806
BisI GCNGC 2 cut(s) 243, 574
BlnI CCTAGG 1 cut(s) 547
BlsI GCNGC 2 cut(s) 244, 575
Bme1390I CCNGG 2 cut(s) 398, 800
Bme18I GGWCC 1 cut(s) 807
BmeT110I CYCGRG 1 cut(s) 495
BmgT120I GGNCC 2 cut(s) 807, 960
BmiI GGNNCC 1 cut(s) 384
BmrFI CCNGG 2 cut(s) 398, 800
BmrI ACTGGG 1 cut(s) 187
BmtI GCTAGC 3 cut(s) 515, 644, 692
BmuI ACTGGG 1 cut(s) 187
BpmI CTGGAG 1 cut(s) 447
Bpu10I CCTNAGC 2 cut(s) 453, 636
BpuEI CTTGAG 1 cut(s) 678
BpuMI CCSGG 1 cut(s) 398
BsaJI CCNNGG 1 cut(s) 547
Bsc4I CCNNNNNNNGG 2 cut(s) 957, 969
Bse1I ACTGG 2 cut(s) 182, 356
Bse21I CCTNAGG 1 cut(s) 414
Bse3DI GCAATG 1 cut(s) 169
BseBI CCWGG 1 cut(s) 800
BseDI CCNNGG 1 cut(s) 547
BseGI GGATG 4 cut(s) 24, 673, 893, 1029
BseLI CCNNNNNNNGG 2 cut(s) 957, 969
BseMI GCAATG 1 cut(s) 169
BseMII CTCAG 5 cut(s) 405, 444, 650, 867, 1012
BseNI ACTGG 2 cut(s) 182, 356
BseRI GAGGAG 3 cut(s) 395, 736, 938
BseXI GCAGC 2 cut(s) 229, 585
BseYI CCCAGC 1 cut(s) 969
BshFI GGCC 3 cut(s) 46, 451, 961
BsiHKAI GWGCWC 1 cut(s) 459
BsiHKCI CYCGRG 1 cut(s) 495
BsiSI CCGG 1 cut(s) 398
BslFI GGGAC 3 cut(s) 188, 380, 543
BslI CCNNNNNNNGG 2 cut(s) 957, 969
BsmAI GTCTC 3 cut(s) 230, 342, 422
BsmFI GGGAC 3 cut(s) 188, 380, 543
BsnI GGCC 3 cut(s) 46, 451, 961
BsoBI CYCGRG 1 cut(s) 495
Bsp1286I GDGCHC 1 cut(s) 459
Bsp143I GATC 3 cut(s) 13, 37, 195
BspACI CCGC 1 cut(s) 143
BspANI GGCC 3 cut(s) 46, 451, 961
BspCNI CTCAG 5 cut(s) 406, 445, 649, 866, 1011
BspLI GGNNCC 1 cut(s) 384
BspOI GCTAGC 3 cut(s) 515, 644, 692
BspPI GGATC 1 cut(s) 8
BspTI CTTAAG 1 cut(s) 541
BsrDI GCAATG 1 cut(s) 169
BsrI ACTGG 2 cut(s) 182, 356
BssECI CCNNGG 1 cut(s) 547
BssMI GATC 3 cut(s) 13, 37, 195
BssT1I CCWWGG 1 cut(s) 547
Bst2UI CCWGG 1 cut(s) 800
Bst4CI ACNGT 4 cut(s) 326, 376, 685, 794
Bst6I CTCTTC 1 cut(s) 420
BstAFI CTTAAG 1 cut(s) 541
BstAPI GCANNNNNTGC 1 cut(s) 168
BstC8I GCNNGC 5 cut(s) 169, 513, 554, 642, 690
BstDEI CTNAG 6 cut(s) 414, 453, 470, 636, 853, 998
BstF5I GGATG 4 cut(s) 24, 673, 893, 1029
BstKTI GATC 3 cut(s) 16, 40, 198
BstMAI GTCTC 3 cut(s) 230, 342, 422
BstMBI GATC 3 cut(s) 13, 37, 195
BstMWI GCNNNNNNNGC 2 cut(s) 140, 168
BstNI CCWGG 1 cut(s) 800
BstNSI RCATGY 1 cut(s) 171
BstSCI CCNGG 2 cut(s) 396, 798
BstSFI CTRYAG 1 cut(s) 964
BstV1I GCAGC 2 cut(s) 229, 585
Bsu36I CCTNAGG 1 cut(s) 414
BsuI GTATCC 1 cut(s) 806
BsuRI GGCC 3 cut(s) 46, 451, 961
BtsCI GGATG 4 cut(s) 24, 673, 893, 1029
BtsIMutI CAGTG 2 cut(s) 331, 381
Cac8I GCNNGC 5 cut(s) 169, 513, 554, 642, 690
CaiI CAGNNNCTG 2 cut(s) 177, 351
Cfr13I GGNCC 2 cut(s) 807, 960
Csp6I GTAC 1 cut(s) 333
CspCI CAANNNNNGTGG 2 cut(s) 652, 687
CviAII CATG 3 cut(s) 168, 203, 741
CviQI GTAC 1 cut(s) 333
DdeI CTNAG 6 cut(s) 414, 453, 470, 636, 853, 998
DpnI GATC 3 cut(s) 15, 39, 197
DpnII GATC 3 cut(s) 13, 37, 195
Eam1104I CTCTTC 1 cut(s) 420
EarI CTCTTC 1 cut(s) 420
Eco130I CCWWGG 1 cut(s) 547
Eco147I AGGCCT 1 cut(s) 46
Eco47I GGWCC 1 cut(s) 807
Eco57I CTGAAG 1 cut(s) 539
Eco81I CCTNAGG 1 cut(s) 414
Eco88I CYCGRG 1 cut(s) 495
EcoO109I RGGNCCY 1 cut(s) 960
EcoRII CCWGG 1 cut(s) 798
EcoT14I CCWWGG 1 cut(s) 547
EcoT22I ATGCAT 1 cut(s) 169
ErhI CCWWGG 1 cut(s) 547
FaeI CATG 3 cut(s) 171, 206, 744
FaqI GGGAC 3 cut(s) 188, 380, 543
FatI CATG 3 cut(s) 167, 202, 740
FbaI TGATCA 2 cut(s) 37, 195
Fnu4HI GCNGC 2 cut(s) 243, 574
FokI GGATG 4 cut(s) 11, 680, 880, 1016
Fsp4HI GCNGC 2 cut(s) 243, 574
FspBI CTAG 5 cut(s) 392, 512, 548, 641, 689
GluI GCNGC 2 cut(s) 243, 574
GsaI CCCAGC 1 cut(s) 973
GsuI CTGGAG 1 cut(s) 447
HaeIII GGCC 3 cut(s) 46, 451, 961
HapII CCGG 1 cut(s) 398
Hin1II CATG 3 cut(s) 171, 206, 744
HinfI GANTC 4 cut(s) 94, 113, 606, 745
HpaII CCGG 1 cut(s) 398
HphI GGTGA 4 cut(s) 52, 308, 800, 853
Hpy166II GTNNAC 2 cut(s) 329, 850
Hpy188I TCNGA 8 cut(s) 99, 124, 227, 347, 519, 825, 856, 1057
Hpy188III TCNNGA 4 cut(s) 464, 497, 695, 1009
Hpy8I GTNNAC 2 cut(s) 329, 850
HpyAV CCTTC 4 cut(s) 65, 349, 639, 853
HpyCH4III ACNGT 4 cut(s) 326, 376, 685, 794
HpyCH4IV ACGT 2 cut(s) 331, 702
HpyCH4V TGCA 2 cut(s) 167, 171
HpyF10VI GCNNNNNNNGC 2 cut(s) 140, 168
HpyF3I CTNAG 6 cut(s) 414, 453, 470, 636, 853, 998
HpySE526I ACGT 2 cut(s) 331, 702
Hsp92II CATG 3 cut(s) 171, 206, 744
Ksp22I TGATCA 2 cut(s) 37, 195
Kzo9I GATC 3 cut(s) 13, 37, 195
LmnI GCTCC 4 cut(s) 228, 382, 737, 925
Lsp1109I GCAGC 2 cut(s) 229, 585
MaeI CTAG 5 cut(s) 392, 512, 548, 641, 689
MaeII ACGT 2 cut(s) 331, 702
MaeIII GTNAC 3 cut(s) 314, 659, 788
MalI GATC 3 cut(s) 15, 39, 197
MboI GATC 3 cut(s) 13, 37, 195
MboII GAAGA 4 cut(s) 178, 295, 437, 497
MhlI GDGCHC 1 cut(s) 459
MluCI AATT 3 cut(s) 251, 1003, 1035
MlyI GAGTC 3 cut(s) 88, 107, 600
MmeI TCCRAC 2 cut(s) 147, 685
Mph1103I ATGCAT 1 cut(s) 169
MseI TTAA 3 cut(s) 542, 680, 753
MslI CAYNNNNRTG 1 cut(s) 666
MspA1I CMGCKG 1 cut(s) 969
MspCI CTTAAG 1 cut(s) 541
MspI CCGG 1 cut(s) 398
MspR9I CCNGG 2 cut(s) 398, 800
MvaI CCWGG 1 cut(s) 800
MwoI GCNNNNNNNGC 2 cut(s) 140, 168
NciI CCSGG 1 cut(s) 398
NdeII GATC 3 cut(s) 13, 37, 195
NheI GCTAGC 3 cut(s) 511, 640, 688
NlaIII CATG 3 cut(s) 171, 206, 744
NlaIV GGNNCC 1 cut(s) 384
NmuCI GTSAC 2 cut(s) 659, 788
NsiI ATGCAT 1 cut(s) 169
NspI RCATGY 1 cut(s) 171
PaeI GCATGC 1 cut(s) 171
PaeR7I CTCGAG 1 cut(s) 495
PceI AGGCCT 1 cut(s) 46
PfeI GAWTC 1 cut(s) 745
PkrI GCNGC 2 cut(s) 244, 575
PleI GAGTC 3 cut(s) 88, 107, 600
PpsI GAGTC 3 cut(s) 88, 107, 600
Psp6I CCWGG 1 cut(s) 798
PspFI CCCAGC 1 cut(s) 969
PspGI CCWGG 1 cut(s) 798
PspN4I GGNNCC 1 cut(s) 384
PspPI GGNCC 2 cut(s) 807, 960
PstNI CAGNNNCTG 2 cut(s) 177, 351
PvuII CAGCTG 1 cut(s) 969
RsaI GTAC 1 cut(s) 334
RsaNI GTAC 1 cut(s) 333
RseI CAYNNNNRTG 1 cut(s) 666
SaqAI TTAA 3 cut(s) 542, 680, 753
SatI GCNGC 2 cut(s) 243, 574
Sau3AI GATC 3 cut(s) 13, 37, 195
Sau96I GGNCC 2 cut(s) 807, 960
SchI GAGTC 3 cut(s) 88, 107, 600
ScrFI CCNGG 2 cut(s) 398, 800
SduI GDGCHC 1 cut(s) 459
SfcI CTRYAG 1 cut(s) 964
Sfr274I CTCGAG 1 cut(s) 495
SinI GGWCC 1 cut(s) 807
SlaI CTCGAG 1 cut(s) 495
SmiMI CAYNNNNRTG 1 cut(s) 666
SmlI CTYRAG 3 cut(s) 495, 541, 693
SmoI CTYRAG 3 cut(s) 495, 541, 693
SphI GCATGC 1 cut(s) 171
Sse9I AATT 3 cut(s) 251, 1003, 1035
SseBI AGGCCT 1 cut(s) 46
SsiI CCGC 1 cut(s) 143
SspMI CTAG 5 cut(s) 392, 512, 548, 641, 689
StuI AGGCCT 1 cut(s) 46
StyD4I CCNGG 2 cut(s) 396, 798
StyI CCWWGG 1 cut(s) 547
TaaI ACNGT 4 cut(s) 326, 376, 685, 794
TaiI ACGT 2 cut(s) 334, 705
TaqI TCGA 3 cut(s) 69, 496, 504
TasI AATT 3 cut(s) 251, 1003, 1035
TfiI GAWTC 1 cut(s) 745
Tru1I TTAA 3 cut(s) 542, 680, 753
Tru9I TTAA 3 cut(s) 542, 680, 753
TscAI CASTG 2 cut(s) 331, 381
TseFI GTSAC 2 cut(s) 659, 788
TseI GCWGC 2 cut(s) 242, 573
Tsp45I GTSAC 2 cut(s) 659, 788
TspDTI ATGAA 4 cut(s) 13, 828, 951, 1028
TspRI CASTG 2 cut(s) 331, 381
Vha464I CTTAAG 1 cut(s) 541
VpaK11BI GGWCC 1 cut(s) 807
XapI RAATTY 2 cut(s) 251, 1035
XceI RCATGY 1 cut(s) 171
XhoI CTCGAG 1 cut(s) 495
XmaJI CCTAGG 1 cut(s) 547
XspI CTAG 5 cut(s) 392, 512, 548, 641, 689
Zsp2I ATGCAT 1 cut(s) 169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.