Prupe.8G114300_v2.0.a1

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000590
Physical Location & Seq
Forward (+)
14220194 .. 14222258
2065 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G114300.1

Sequence Viewer

Length: 1062 bp
ATGGGAGAAGTTGATCCAGATTTCATACAAGACCCTGATCACAGGCCTAAACTCTTCATCATCGAAGCCGAAGGCATACCCTTGATTGACCTGTCTCCAATAAACTCCCCAGACTCCATTACTGATCCCAAAGCCATTGAAGGTGTTGTTAGAGAAATAGGCAGTGCATGCAAGGGCTGGGGGTTCTTCCAAGTGATCAATCATGGGGTTCAATTAGATAAGCTCCGAAATATTGAGACTGCTGCTAGGAAGTTCTTTGCTCTGCCCTTGGAGGAGAAGAGGAAGATTAGAAGGGATGAAAAAAGCGTGTTGGGTTACTATGACTGTGAGCGTACCAAGAATGTCAGAGACTGGAAGGAGGTGTTTGATTTAACAGTGGAGGAGCCTACGTTAGTCCCGGCTTCGCCTGACCCCGAGGACAAGGAAGAGACAGAGTGGCATAACCGATGGCCGGAGTATCCTCCAGAATACAGGGAGGCCTGTGAAGAATATGCGCAAGAAATCGAAAAGCTAGCTCTGAAGTTGATGGGACTTATTGCCTTGAGCCTTGGCTTGCCAGAAAACAGGTTCAGCAGATACTTCAAAGACCAAACAACTTCTATCTCACTCAATTACTATCCACCTTGTCCTTCCCCTCAGTTAGCTCTTGGTGTTGGTCCCCACAAGGATGGCGGTGCGTTAACCGTGCTAGCTCAAGATGAAGTTGGAGGATTGGAAGTGAAGAGAAAAACAGATGGGGAGTGGATCCGAGTTAAACCCACCCCAAATGCCTATGTCATCAATGTTGGTGACAGTCTTCAGGTTTGGAGCAATGATATTTATCATAGTGTAGAACACAGGGCAATGGTGAACTCAGAGAAGAAAAGGTTTTCTATTGCTTACTTTCTCAAACCATCACACTACACCCTAATCAAGCCCTTGGAGGAGCTAATAAGTGAAGAAAACCCTGCCAAGTATAGGCCATACAACTGGGGAAAGTTTATGACCCACAGAAAACTCACCAATTTCAAGAAACTCAATGTGGAGAACATCCAAATTCATCATTTCGGGTTATCAGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

354

Amino Acids

40.64

Weight (kDa)

5.61

Isoelectric Point (pI)

49.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000590)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G19000 AT3G19000
fragaria_vesca FvH4_2g07071 FvH4_2g07080 FvH4_2g07080 FvH4_2g07081 FvH4_2g07082 FvH4_2g07082
malus_domestica MD05G1074000.v1.1 MD10G1088100.v1.1 MD10G1088200.v1.1 MD14G1207600.v1.1
prunus_persica Prupe.8G114100_v2.0.a1 Prupe.8G114200_v2.0.a1 Prupe.8G114300_v2.0.a1 Prupe.8G114500_v2.0.a1 Prupe.8G114800_v2.0.a1 Prupe.8G115100_v2.0.a1
pyrus_communis pycom05g06640 pycom05g06660 pycom05g06670 pycom10g07050
rosa_chinensis RchiOBHm_Chr6g0244141 RchiOBHm_Chr6g0259511 RchiOBHm_Chr6g0259521 RchiOBHm_Chr6g0259531 RchiOBHm_Chr6g0259551 RchiOBHm_Chr6g0259561
rosa_laevigata RLG00000014522 RLG00000014523 RLG00000014524 RLG00000014525 RLG00000014526 RLG00000014527
rosa_multiflora Rmu_ssc0000050.1_g000019 Rmu_ssc0000050.1_g000020 Rmu_ssc0000050.1_g000026 Rmu_ssc0000050.1_g000027 Rmu_ssc0000050.1_g000028
rosa_roxburghii Rroxscaffold_7G00206780 Rroxscaffold_7G00206790 Rroxscaffold_7G00206850 Rroxscaffold_7G00206860 Rroxscaffold_7G00206870 Rroxscaffold_7G00206880
rosa_rugosa Rorug05G0589100 Rorug05G0589200.1 Rorug05G0589300 Rorug05G0589400 Rorug05G0589500 Rorug05G0589600
rosa_samantha Rh4CG096000 Rh5BG231700 Rh6AG104900 Rh6AG105000 Rh6AG105100 Rh6AG105500 Rh6AG105600 Rh6BG098500 Rh6BG098700 Rh6BG098800 Rh6BG099000 Rh6BG099100 Rh6CG094200 Rh6CG094300 Rh6CG094400 Rh6CG094500 Rh6CG094600 Rh6DG088300 Rh6DG088400 Rh6DG088500 Rh6DG088600 Rh6DG088700
rosa_wichuraiana Rw0G014270 Rw0G014280 Rw0G014290 Rw6G009080 Rw6G009090 Rw6G009100 Rw6G009110 Rw6G009120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 495
AciI CCGC 1 cut(s) 672
AclWI GGATC 4 cut(s) 8, 119, 739, 752
AcoI YGGCCR 1 cut(s) 449
AcsI RAATTY 1 cut(s) 1035
AcuI CTGAAG 2 cut(s) 539, 782
AfaI GTAC 1 cut(s) 334
AfiI CCNNNNNNNGG 2 cut(s) 451, 957
AgsI TTSAA 4 cut(s) 140, 212, 583, 1009
AluBI AGCT 6 cut(s) 223, 511, 515, 644, 692, 928
AluI AGCT 6 cut(s) 223, 511, 515, 644, 692, 928
Alw26I GTCTC 4 cut(s) 99, 230, 342, 422
AlwI GGATC 4 cut(s) 8, 119, 739, 752
AlwNI CAGNNNCTG 1 cut(s) 351
Ama87I CYCGRG 1 cut(s) 413
AoxI GGCC 4 cut(s) 44, 449, 477, 959
ApeKI GCWGC 1 cut(s) 242
ApoI RAATTY 1 cut(s) 1035
AspLEI GCGC 1 cut(s) 496
AspS9I GGNCC 1 cut(s) 656
AsuC2I CCSGG 1 cut(s) 398
AsuHPI GGTGA 3 cut(s) 800, 859, 991
AsuNHI GCTAGC 2 cut(s) 511, 688
AvaI CYCGRG 1 cut(s) 413
AvaII GGWCC 1 cut(s) 656
BamHI GGATCC 1 cut(s) 744
BbsI GAAGAC 1 cut(s) 788
BbvI GCAGC 1 cut(s) 229
BccI CCATC 5 cut(s) 441, 520, 662, 728, 901
BciVI GTATCC 1 cut(s) 468
BclI TGATCA 2 cut(s) 37, 195
BcnI CCSGG 1 cut(s) 398
BcoDI GTCTC 4 cut(s) 99, 230, 342, 422
BfaI CTAG 3 cut(s) 246, 512, 689
BfuI GTATCC 1 cut(s) 468
BisI GCNGC 1 cut(s) 243
BlsI GCNGC 1 cut(s) 244
Bme1390I CCNGG 1 cut(s) 398
Bme18I GGWCC 1 cut(s) 656
BmeT110I CYCGRG 1 cut(s) 413
BmgT120I GGNCC 1 cut(s) 656
BmiI GGNNCC 3 cut(s) 384, 658, 746
BmrFI CCNGG 1 cut(s) 398
BmrI ACTGGG 1 cut(s) 979
BmtI GCTAGC 2 cut(s) 515, 692
BmuI ACTGGG 1 cut(s) 979
BpiI GAAGAC 1 cut(s) 788
BpmI CTGGAG 1 cut(s) 447
BpuEI CTTGAG 2 cut(s) 562, 678
BpuMI CCSGG 1 cut(s) 398
BsaBI GATNNNNATC 1 cut(s) 819
BsaJI CCNNGG 4 cut(s) 267, 414, 547, 918
BsaXI ACNNNNNCTCC 2 cut(s) 374, 404
Bsc4I CCNNNNNNNGG 2 cut(s) 451, 957
Bse1I ACTGG 2 cut(s) 356, 974
Bse3DI GCAATG 2 cut(s) 817, 849
Bse8I GATNNNNATC 1 cut(s) 819
BseDI CCNNGG 4 cut(s) 267, 414, 547, 918
BseGI GGATG 3 cut(s) 301, 673, 1029
BseJI GATNNNNATC 1 cut(s) 819
BseLI CCNNNNNNNGG 2 cut(s) 451, 957
BseMI GCAATG 2 cut(s) 817, 849
BseMII CTCAG 2 cut(s) 650, 867
BseNI ACTGG 2 cut(s) 356, 974
BseRI GAGGAG 3 cut(s) 287, 395, 938
BseXI GCAGC 1 cut(s) 229
BseYI CCCAGC 1 cut(s) 177
BshFI GGCC 4 cut(s) 46, 451, 479, 961
BsiHKCI CYCGRG 1 cut(s) 413
BsiSI CCGG 2 cut(s) 398, 452
BslFI GGGAC 3 cut(s) 380, 543, 642
BslI CCNNNNNNNGG 2 cut(s) 451, 957
BsmAI GTCTC 4 cut(s) 99, 230, 342, 422
BsmFI GGGAC 3 cut(s) 380, 543, 642
BsnI GGCC 4 cut(s) 46, 451, 479, 961
BsoBI CYCGRG 1 cut(s) 413
Bsp143I GATC 5 cut(s) 13, 37, 124, 195, 744
BspACI CCGC 1 cut(s) 672
BspANI GGCC 4 cut(s) 46, 451, 479, 961
BspCNI CTCAG 2 cut(s) 649, 866
BspLI GGNNCC 3 cut(s) 384, 658, 746
BspOI GCTAGC 2 cut(s) 515, 692
BspPI GGATC 4 cut(s) 8, 119, 739, 752
BsrDI GCAATG 2 cut(s) 817, 849
BsrI ACTGG 2 cut(s) 356, 974
BssECI CCNNGG 4 cut(s) 267, 414, 547, 918
BssMI GATC 5 cut(s) 13, 37, 124, 195, 744
BssT1I CCWWGG 3 cut(s) 267, 547, 918
Bst4CI ACNGT 4 cut(s) 326, 376, 685, 794
Bst6I CTCTTC 4 cut(s) 59, 272, 420, 716
BstAPI GCANNNNNTGC 1 cut(s) 168
BstC8I GCNNGC 4 cut(s) 169, 513, 554, 690
BstDEI CTNAG 2 cut(s) 636, 853
BstF5I GGATG 3 cut(s) 301, 673, 1029
BstHHI GCGC 1 cut(s) 496
BstKTI GATC 5 cut(s) 16, 40, 127, 198, 747
BstMAI GTCTC 4 cut(s) 99, 230, 342, 422
BstMBI GATC 5 cut(s) 13, 37, 124, 195, 744
BstMWI GCNNNNNNNGC 1 cut(s) 168
BstNSI RCATGY 1 cut(s) 171
BstSCI CCNGG 1 cut(s) 396
BstV1I GCAGC 1 cut(s) 229
BstV2I GAAGAC 1 cut(s) 788
BstX2I RGATCY 1 cut(s) 744
BstXI CCANNNNNNTGG 2 cut(s) 668, 969
BstYI RGATCY 1 cut(s) 744
BsuI GTATCC 1 cut(s) 468
BsuRI GGCC 4 cut(s) 46, 451, 479, 961
BtsCI GGATG 3 cut(s) 301, 673, 1029
BtsI GCAGTG 1 cut(s) 169
BtsIMutI CAGTG 2 cut(s) 169, 381
Cac8I GCNNGC 4 cut(s) 169, 513, 554, 690
CaiI CAGNNNCTG 1 cut(s) 351
CfoI GCGC 1 cut(s) 496
Cfr13I GGNCC 1 cut(s) 656
Csp6I GTAC 1 cut(s) 333
CviAII CATG 2 cut(s) 168, 203
CviQI GTAC 1 cut(s) 333
DdeI CTNAG 2 cut(s) 636, 853
DpnI GATC 5 cut(s) 15, 39, 126, 197, 746
DpnII GATC 5 cut(s) 13, 37, 124, 195, 744
EaeI YGGCCR 1 cut(s) 449
Eam1104I CTCTTC 4 cut(s) 59, 272, 420, 716
EarI CTCTTC 4 cut(s) 59, 272, 420, 716
Eco130I CCWWGG 3 cut(s) 267, 547, 918
Eco147I AGGCCT 2 cut(s) 46, 479
Eco47I GGWCC 1 cut(s) 656
Eco57I CTGAAG 2 cut(s) 539, 782
Eco88I CYCGRG 1 cut(s) 413
EcoT14I CCWWGG 3 cut(s) 267, 547, 918
ErhI CCWWGG 3 cut(s) 267, 547, 918
FaeI CATG 2 cut(s) 171, 206
FaqI GGGAC 3 cut(s) 380, 543, 642
FatI CATG 2 cut(s) 167, 202
FbaI TGATCA 2 cut(s) 37, 195
Fnu4HI GCNGC 1 cut(s) 243
FokI GGATG 3 cut(s) 308, 680, 1016
Fsp4HI GCNGC 1 cut(s) 243
FspBI CTAG 3 cut(s) 246, 512, 689
FspI TGCGCA 1 cut(s) 495
GlaI GCGC 1 cut(s) 495
GluI GCNGC 1 cut(s) 243
GsaI CCCAGC 1 cut(s) 181
GsuI CTGGAG 1 cut(s) 447
HaeIII GGCC 4 cut(s) 46, 451, 479, 961
HapII CCGG 2 cut(s) 398, 452
HhaI GCGC 1 cut(s) 496
Hin1II CATG 2 cut(s) 171, 206
Hin6I GCGC 1 cut(s) 494
HinP1I GCGC 1 cut(s) 494
HincII GTYRAC 1 cut(s) 681
HindII GTYRAC 1 cut(s) 681
HinfI GANTC 1 cut(s) 113
HpaI GTTAAC 1 cut(s) 681
HpaII CCGG 2 cut(s) 398, 452
HphI GGTGA 3 cut(s) 800, 859, 991
Hpy166II GTNNAC 2 cut(s) 681, 850
Hpy188I TCNGA 6 cut(s) 227, 347, 519, 749, 856, 1057
Hpy188III TCNNGA 4 cut(s) 17, 464, 695, 1009
Hpy8I GTNNAC 2 cut(s) 681, 850
HpyAV CCTTC 5 cut(s) 65, 134, 285, 349, 639
HpyCH4III ACNGT 4 cut(s) 326, 376, 685, 794
HpyCH4IV ACGT 1 cut(s) 389
HpyCH4V TGCA 2 cut(s) 167, 171
HpyF10VI GCNNNNNNNGC 1 cut(s) 168
HpyF3I CTNAG 2 cut(s) 636, 853
HpySE526I ACGT 1 cut(s) 389
Hsp92II CATG 2 cut(s) 171, 206
HspAI GCGC 1 cut(s) 494
Ksp22I TGATCA 2 cut(s) 37, 195
KspAI GTTAAC 1 cut(s) 681
Kzo9I GATC 5 cut(s) 13, 37, 124, 195, 744
LmnI GCTCC 4 cut(s) 228, 382, 807, 925
Lsp1109I GCAGC 1 cut(s) 229
MaeI CTAG 3 cut(s) 246, 512, 689
MaeII ACGT 1 cut(s) 389
MaeIII GTNAC 2 cut(s) 314, 788
MalI GATC 5 cut(s) 15, 39, 126, 197, 746
MboI GATC 5 cut(s) 13, 37, 124, 195, 744
MflI RGATCY 1 cut(s) 744
MluCI AATT 4 cut(s) 212, 610, 1003, 1035
MlyI GAGTC 1 cut(s) 107
MmeI TCCRAC 1 cut(s) 685
MseI TTAA 3 cut(s) 371, 680, 753
MslI CAYNNNNRTG 1 cut(s) 666
MspI CCGG 2 cut(s) 398, 452
MspR9I CCNGG 1 cut(s) 398
MwoI GCNNNNNNNGC 1 cut(s) 168
NciI CCSGG 1 cut(s) 398
NdeII GATC 5 cut(s) 13, 37, 124, 195, 744
NheI GCTAGC 2 cut(s) 511, 688
NlaIII CATG 2 cut(s) 171, 206
NlaIV GGNNCC 3 cut(s) 384, 658, 746
NmuCI GTSAC 1 cut(s) 788
NsbI TGCGCA 1 cut(s) 495
NspI RCATGY 1 cut(s) 171
PaeI GCATGC 1 cut(s) 171
PceI AGGCCT 2 cut(s) 46, 479
PkrI GCNGC 1 cut(s) 244
PleI GAGTC 1 cut(s) 107
PpsI GAGTC 1 cut(s) 107
PspFI CCCAGC 1 cut(s) 177
PspN4I GGNNCC 3 cut(s) 384, 658, 746
PspPI GGNCC 1 cut(s) 656
PstNI CAGNNNCTG 1 cut(s) 351
PsuI RGATCY 1 cut(s) 744
RsaI GTAC 1 cut(s) 334
RsaNI GTAC 1 cut(s) 333
RseI CAYNNNNRTG 1 cut(s) 666
SaqAI TTAA 3 cut(s) 371, 680, 753
SatI GCNGC 1 cut(s) 243
Sau3AI GATC 5 cut(s) 13, 37, 124, 195, 744
Sau96I GGNCC 1 cut(s) 656
SchI GAGTC 1 cut(s) 107
ScrFI CCNGG 1 cut(s) 398
SinI GGWCC 1 cut(s) 656
SmiMI CAYNNNNRTG 1 cut(s) 666
SmlI CTYRAG 2 cut(s) 541, 693
SmoI CTYRAG 2 cut(s) 541, 693
SphI GCATGC 1 cut(s) 171
Sse9I AATT 4 cut(s) 212, 610, 1003, 1035
SseBI AGGCCT 2 cut(s) 46, 479
SsiI CCGC 1 cut(s) 672
SspI AATATT 1 cut(s) 232
SspMI CTAG 3 cut(s) 246, 512, 689
StuI AGGCCT 2 cut(s) 46, 479
StyD4I CCNGG 1 cut(s) 396
StyI CCWWGG 3 cut(s) 267, 547, 918
TaaI ACNGT 4 cut(s) 326, 376, 685, 794
TaiI ACGT 1 cut(s) 392
TaqI TCGA 2 cut(s) 63, 504
TasI AATT 4 cut(s) 212, 610, 1003, 1035
Tru1I TTAA 3 cut(s) 371, 680, 753
Tru9I TTAA 3 cut(s) 371, 680, 753
TscAI CASTG 2 cut(s) 169, 381
TseFI GTSAC 1 cut(s) 788
TseI GCWGC 1 cut(s) 242
Tsp45I GTSAC 1 cut(s) 788
TspDTI ATGAA 5 cut(s) 13, 46, 312, 714, 1028
TspRI CASTG 2 cut(s) 169, 381
VpaK11BI GGWCC 1 cut(s) 656
XapI RAATTY 1 cut(s) 1035
XceI RCATGY 1 cut(s) 171
XspI CTAG 3 cut(s) 246, 512, 689
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.