Prupe.8G114800_v2.0.a1

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000590
Physical Location & Seq
Forward (+)
14239622 .. 14241923
2302 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G114800.1

Sequence Viewer

Length: 1065 bp
ATGGGAGAGGTTGATCCAACTTTCATCCAAGACCCTGAGCACAGGCCCAAACTCTCCGTCACCGAAGCTGAAGGCATACCATTGATTGACCTGTCTCCCCTAAACTCCTCAGACAACATTTCTGACCCTAAAGCCATTGAAGGGGTTGTCAGAGAAATAGGCAATGCATGCAAAGAGTGGGGGTTCTTCCAAGTGATCAACCATGGGGTGCTATTGGATAAGCACAAAAAGATCGAGGATGCTGCTAGGAAATTTTTTGCTCAGCCTTTGGAGGAGAAGAGGAAGATCACGAGGGATGAAAATAGTTTGTTTGGTTACTATGACACTGAGCACACCAAGAATGTAAGAGACTGGAAGGAGGTGTTTGATTTCGCAGTGGAGGAGCCAATGTTAATGCCAGCTTCCCTTGATCCTGAGGACAAGGAAGAGACAACGTGGACTAACCGGTGGCCTGAATATCCTCCAGAACTAAGGGTGGCGTGTGAAGAGTATATTGAAGAAGTAGAAAAGCTAGCTCTAAAGTTGATGGGACTTATAGCCTTGAGCCTAGGCTTGACAGCAGACAGATTCAACAGCTACTTCAAAGATCAAACAAGTTTTATCAGACTCAACTACTATCCACCTTGCCCTTCCCCTCAGTTAGCTCTCGGCATTGGGCGCCACAAGGATAGCGGTGCTTTAACTGTGCTTGCTCAGGATGAGGTCGGAGGATTGGAAGTGAAGAGGAAGAGAGATGGAGAGTGGATTCAGGTTAAACCTACCCCAAATGCCTATATCATCAATGTTGGTGACATTATTCAGGTTTGGAGCAATGACAGATATGAGAGTGTGGAACACAGGGTGTTGTTGAATTCAGAGAAGGGAAGGTTTTCCATTCCCTACTTTGTCAACCCAGCACACTATACCCTAGTCAAGCCCTTGGAGGAGCTGACCCATGAACAAGAAGACCCTGCAAAATATAAGCCTTACAGCTGGGGCAAGTTTTTGAATCACAGAAAGCTCAGTAATTTCAAGAAACACAATGCTGAAAACATCCAGCTTTATCATTTCAGGGTTTCGGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

355

Amino Acids

40.95

Weight (kDa)

5.44

Isoelectric Point (pI)

40.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000590)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G19000 AT3G19000
fragaria_vesca FvH4_2g07071 FvH4_2g07080 FvH4_2g07080 FvH4_2g07081 FvH4_2g07082 FvH4_2g07082
malus_domestica MD05G1074000.v1.1 MD10G1088100.v1.1 MD10G1088200.v1.1 MD14G1207600.v1.1
prunus_persica Prupe.8G114100_v2.0.a1 Prupe.8G114200_v2.0.a1 Prupe.8G114300_v2.0.a1 Prupe.8G114500_v2.0.a1 Prupe.8G114800_v2.0.a1 Prupe.8G115100_v2.0.a1
pyrus_communis pycom05g06640 pycom05g06660 pycom05g06670 pycom10g07050
rosa_chinensis RchiOBHm_Chr6g0244141 RchiOBHm_Chr6g0259511 RchiOBHm_Chr6g0259521 RchiOBHm_Chr6g0259531 RchiOBHm_Chr6g0259551 RchiOBHm_Chr6g0259561
rosa_laevigata RLG00000014522 RLG00000014523 RLG00000014524 RLG00000014525 RLG00000014526 RLG00000014527
rosa_multiflora Rmu_ssc0000050.1_g000019 Rmu_ssc0000050.1_g000020 Rmu_ssc0000050.1_g000026 Rmu_ssc0000050.1_g000027 Rmu_ssc0000050.1_g000028
rosa_roxburghii Rroxscaffold_7G00206780 Rroxscaffold_7G00206790 Rroxscaffold_7G00206850 Rroxscaffold_7G00206860 Rroxscaffold_7G00206870 Rroxscaffold_7G00206880
rosa_rugosa Rorug05G0589100 Rorug05G0589200.1 Rorug05G0589300 Rorug05G0589400 Rorug05G0589500 Rorug05G0589600
rosa_samantha Rh4CG096000 Rh5BG231700 Rh6AG104900 Rh6AG105000 Rh6AG105100 Rh6AG105500 Rh6AG105600 Rh6BG098500 Rh6BG098700 Rh6BG098800 Rh6BG099000 Rh6BG099100 Rh6CG094200 Rh6CG094300 Rh6CG094400 Rh6CG094500 Rh6CG094600 Rh6DG088300 Rh6DG088400 Rh6DG088500 Rh6DG088600 Rh6DG088700
rosa_wichuraiana Rw0G014270 Rw0G014280 Rw0G014290 Rw6G009080 Rw6G009090 Rw6G009100 Rw6G009110 Rw6G009120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 657
AciI CCGC 1 cut(s) 672
AclWI GGATC 2 cut(s) 8, 404
AcsI RAATTY 2 cut(s) 251, 850
AcuI CTGAAG 1 cut(s) 90
AcyI GRCGYC 1 cut(s) 658
AdeI CACNNNGTG 1 cut(s) 841
AfiI CCNNNNNNNGG 1 cut(s) 141
AgeI ACCGGT 1 cut(s) 444
AgsI TTSAA 7 cut(s) 140, 497, 571, 583, 850, 988, 1012
Alw21I GWGCWC 2 cut(s) 42, 333
Alw26I GTCTC 3 cut(s) 99, 342, 422
AlwI GGATC 2 cut(s) 8, 404
AoxI GGCC 2 cut(s) 44, 449
ApeKI GCWGC 1 cut(s) 242
ApoI RAATTY 2 cut(s) 251, 850
ArsI GACNNNNNNTTYG 2 cut(s) 42, 74
AsiGI ACCGGT 1 cut(s) 444
Asp700I GAANNNNTTC 1 cut(s) 868
AspA2I CCTAGG 1 cut(s) 547
AspLEI GCGC 1 cut(s) 660
AspS9I GGNCC 1 cut(s) 45
AsuHPI GGTGA 2 cut(s) 52, 800
AsuNHI GCTAGC 1 cut(s) 511
AvrII CCTAGG 1 cut(s) 547
AxyI CCTNAGG 1 cut(s) 414
BanI GGYRCC 1 cut(s) 657
BauI CACGAG 1 cut(s) 289
BbsI GAAGAC 1 cut(s) 951
Bbv12I GWGCWC 2 cut(s) 42, 333
BbvI GCAGC 1 cut(s) 229
BccI CCATC 2 cut(s) 520, 728
BcgI CGANNNNNNTGC 2 cut(s) 224, 258
BclI TGATCA 1 cut(s) 195
BcoDI GTCTC 3 cut(s) 99, 342, 422
BfaI CTAG 4 cut(s) 246, 512, 548, 908
BfoI RGCGCY 1 cut(s) 661
BisI GCNGC 1 cut(s) 243
BlnI CCTAGG 1 cut(s) 547
BlpI GCTNAGC 1 cut(s) 261
BlsI GCNGC 1 cut(s) 244
BmgT120I GGNCC 1 cut(s) 45
BmiI GGNNCC 2 cut(s) 384, 659
BmsI GCATC 1 cut(s) 229
BmtI GCTAGC 1 cut(s) 515
BpiI GAAGAC 1 cut(s) 951
BpmI CTGGAG 1 cut(s) 447
Bpu10I CCTNAGC 2 cut(s) 36, 693
Bpu1102I GCTNAGC 1 cut(s) 261
BpuEI CTTGAG 1 cut(s) 562
BsaHI GRCGYC 1 cut(s) 658
BsaJI CCNNGG 3 cut(s) 202, 547, 918
BsaWI WCCGGW 1 cut(s) 444
BsaXI ACNNNNNCTCC 2 cut(s) 374, 404
Bsc4I CCNNNNNNNGG 1 cut(s) 141
Bse118I RCCGGY 1 cut(s) 444
Bse1I ACTGG 1 cut(s) 356
Bse21I CCTNAGG 1 cut(s) 414
Bse3DI GCAATG 2 cut(s) 169, 817
BseDI CCNNGG 3 cut(s) 202, 547, 918
BseGI GGATG 5 cut(s) 24, 244, 301, 703, 1032
BseLI CCNNNNNNNGG 1 cut(s) 141
BseMI GCAATG 2 cut(s) 169, 817
BseMII CTCAG 8 cut(s) 27, 123, 275, 318, 405, 650, 707, 1015
BseNI ACTGG 1 cut(s) 356
BseRI GAGGAG 4 cut(s) 97, 287, 395, 938
BseXI GCAGC 1 cut(s) 229
BseYI CCCAGC 2 cut(s) 892, 972
BshFI GGCC 2 cut(s) 46, 451
BshNI GGYRCC 1 cut(s) 657
BshTI ACCGGT 1 cut(s) 444
BsiHKAI GWGCWC 2 cut(s) 42, 333
BsiSI CCGG 1 cut(s) 445
BslFI GGGAC 1 cut(s) 543
BslI CCNNNNNNNGG 1 cut(s) 141
BsmAI GTCTC 3 cut(s) 99, 342, 422
BsmFI GGGAC 1 cut(s) 543
BsnI GGCC 2 cut(s) 46, 451
Bsp1286I GDGCHC 2 cut(s) 42, 333
Bsp143I GATC 6 cut(s) 13, 195, 231, 285, 409, 586
Bsp1720I GCTNAGC 1 cut(s) 261
Bsp19I CCATGG 1 cut(s) 202
BspACI CCGC 1 cut(s) 672
BspANI GGCC 2 cut(s) 46, 451
BspCNI CTCAG 8 cut(s) 28, 122, 274, 319, 406, 649, 706, 1014
BspLI GGNNCC 2 cut(s) 384, 659
BspOI GCTAGC 1 cut(s) 515
BspPI GGATC 2 cut(s) 8, 404
BspT107I GGYRCC 1 cut(s) 657
BsrDI GCAATG 2 cut(s) 169, 817
BsrFI RCCGGY 1 cut(s) 444
BsrI ACTGG 1 cut(s) 356
BssAI RCCGGY 1 cut(s) 444
BssECI CCNNGG 3 cut(s) 202, 547, 918
BssMI GATC 6 cut(s) 13, 195, 231, 285, 409, 586
BssNI GRCGYC 1 cut(s) 658
BssSI CACGAG 1 cut(s) 289
BssT1I CCWWGG 3 cut(s) 202, 547, 918
Bst2BI CACGAG 1 cut(s) 289
Bst4CI ACNGT 1 cut(s) 685
Bst6I CTCTTC 5 cut(s) 272, 420, 480, 716, 722
BstACI GRCGYC 1 cut(s) 658
BstAPI GCANNNNNTGC 1 cut(s) 168
BstC8I GCNNGC 4 cut(s) 169, 399, 513, 690
BstDEI CTNAG 9 cut(s) 36, 109, 261, 327, 414, 470, 636, 693, 1001
BstDSI CCRYGG 1 cut(s) 202
BstF5I GGATG 5 cut(s) 24, 244, 301, 703, 1032
BstH2I RGCGCY 1 cut(s) 661
BstHHI GCGC 1 cut(s) 660
BstKTI GATC 6 cut(s) 16, 198, 234, 288, 412, 589
BstMAI GTCTC 3 cut(s) 99, 342, 422
BstMBI GATC 6 cut(s) 13, 195, 231, 285, 409, 586
BstMWI GCNNNNNNNGC 2 cut(s) 168, 657
BstNSI RCATGY 1 cut(s) 171
BstV1I GCAGC 1 cut(s) 229
BstV2I GAAGAC 1 cut(s) 951
Bsu36I CCTNAGG 1 cut(s) 414
BsuRI GGCC 2 cut(s) 46, 451
BtgI CCRYGG 1 cut(s) 202
BtsCI GGATG 5 cut(s) 24, 244, 301, 703, 1032
BtsI GCAGTG 1 cut(s) 381
BtsIMutI CAGTG 2 cut(s) 324, 381
Cac8I GCNNGC 4 cut(s) 169, 399, 513, 690
CfoI GCGC 1 cut(s) 660
Cfr10I RCCGGY 1 cut(s) 444
Cfr13I GGNCC 1 cut(s) 45
CspAI ACCGGT 1 cut(s) 444
CviAII CATG 3 cut(s) 168, 203, 935
DdeI CTNAG 9 cut(s) 36, 109, 261, 327, 414, 470, 636, 693, 1001
DinI GGCGCC 1 cut(s) 659
DpnI GATC 6 cut(s) 15, 197, 233, 287, 411, 588
DpnII GATC 6 cut(s) 13, 195, 231, 285, 409, 586
DraIII CACNNNGTG 1 cut(s) 841
Eam1104I CTCTTC 5 cut(s) 272, 420, 480, 716, 722
EarI CTCTTC 5 cut(s) 272, 420, 480, 716, 722
Eco130I CCWWGG 3 cut(s) 202, 547, 918
Eco57I CTGAAG 1 cut(s) 90
Eco81I CCTNAGG 1 cut(s) 414
EcoRI GAATTC 1 cut(s) 850
EcoT14I CCWWGG 3 cut(s) 202, 547, 918
EcoT22I ATGCAT 1 cut(s) 169
EgeI GGCGCC 1 cut(s) 659
EheI GGCGCC 1 cut(s) 659
ErhI CCWWGG 3 cut(s) 202, 547, 918
FaeI CATG 3 cut(s) 171, 206, 938
FaqI GGGAC 1 cut(s) 543
FatI CATG 3 cut(s) 167, 202, 934
FbaI TGATCA 1 cut(s) 195
Fnu4HI GCNGC 1 cut(s) 243
FokI GGATG 5 cut(s) 11, 251, 308, 710, 1019
Fsp4HI GCNGC 1 cut(s) 243
FspBI CTAG 4 cut(s) 246, 512, 548, 908
GlaI GCGC 1 cut(s) 659
GluI GCNGC 1 cut(s) 243
GsaI CCCAGC 2 cut(s) 896, 976
GsuI CTGGAG 1 cut(s) 447
HaeII RGCGCY 1 cut(s) 661
HaeIII GGCC 2 cut(s) 46, 451
HapII CCGG 1 cut(s) 445
HhaI GCGC 1 cut(s) 660
Hin1I GRCGYC 1 cut(s) 658
Hin1II CATG 3 cut(s) 171, 206, 938
Hin6I GCGC 1 cut(s) 658
HinP1I GCGC 1 cut(s) 658
HincII GTYRAC 1 cut(s) 889
HindII GTYRAC 1 cut(s) 889
HinfI GANTC 4 cut(s) 567, 606, 745, 988
HpaII CCGG 1 cut(s) 445
HphI GGTGA 2 cut(s) 52, 800
Hpy166II GTNNAC 2 cut(s) 438, 889
Hpy188I TCNGA 7 cut(s) 112, 124, 152, 605, 707, 856, 1060
Hpy188III TCNNGA 5 cut(s) 289, 413, 464, 695, 1012
Hpy8I GTNNAC 2 cut(s) 438, 889
HpyAV CCTTC 6 cut(s) 65, 134, 349, 639, 853, 858
HpyCH4III ACNGT 1 cut(s) 685
HpyCH4IV ACGT 1 cut(s) 434
HpyCH4V TGCA 3 cut(s) 167, 171, 953
HpyF10VI GCNNNNNNNGC 2 cut(s) 168, 657
HpyF3I CTNAG 9 cut(s) 36, 109, 261, 327, 414, 470, 636, 693, 1001
HpySE526I ACGT 1 cut(s) 434
Hsp92I GRCGYC 1 cut(s) 658
Hsp92II CATG 3 cut(s) 171, 206, 938
HspAI GCGC 1 cut(s) 658
KasI GGCGCC 1 cut(s) 657
Ksp22I TGATCA 1 cut(s) 195
Kzo9I GATC 6 cut(s) 13, 195, 231, 285, 409, 586
LmnI GCTCC 3 cut(s) 382, 807, 925
Lsp1109I GCAGC 1 cut(s) 229
LweI GCATC 1 cut(s) 229
MaeI CTAG 4 cut(s) 246, 512, 548, 908
MaeII ACGT 1 cut(s) 434
MaeIII GTNAC 3 cut(s) 58, 314, 788
MalI GATC 6 cut(s) 15, 197, 233, 287, 411, 588
MboI GATC 6 cut(s) 13, 195, 231, 285, 409, 586
MboII GAAGA 9 cut(s) 178, 289, 295, 437, 497, 509, 733, 739, 956
MhlI GDGCHC 2 cut(s) 42, 333
MluCI AATT 3 cut(s) 251, 850, 1006
Mly113I GGCGCC 1 cut(s) 658
MlyI GAGTC 1 cut(s) 600
MmeI TCCRAC 2 cut(s) 41, 685
Mph1103I ATGCAT 1 cut(s) 169
MroXI GAANNNNTTC 1 cut(s) 868
MseI TTAA 3 cut(s) 392, 680, 753
MspA1I CMGCKG 1 cut(s) 972
MspI CCGG 1 cut(s) 445
MwoI GCNNNNNNNGC 2 cut(s) 168, 657
NarI GGCGCC 1 cut(s) 658
NcoI CCATGG 1 cut(s) 202
NdeII GATC 6 cut(s) 13, 195, 231, 285, 409, 586
NheI GCTAGC 1 cut(s) 511
NlaIII CATG 3 cut(s) 171, 206, 938
NlaIV GGNNCC 2 cut(s) 384, 659
NmeAIII GCCGAG 1 cut(s) 627
NmuCI GTSAC 2 cut(s) 58, 788
NsiI ATGCAT 1 cut(s) 169
NspI RCATGY 1 cut(s) 171
PaeI GCATGC 1 cut(s) 171
PdmI GAANNNNTTC 1 cut(s) 868
PfeI GAWTC 3 cut(s) 567, 745, 988
PinAI ACCGGT 1 cut(s) 444
PkrI GCNGC 1 cut(s) 244
PleI GAGTC 1 cut(s) 600
PluTI GGCGCC 1 cut(s) 661
PpsI GAGTC 1 cut(s) 600
PspFI CCCAGC 2 cut(s) 892, 972
PspN4I GGNNCC 2 cut(s) 384, 659
PspPI GGNCC 1 cut(s) 45
PvuII CAGCTG 1 cut(s) 972
SaqAI TTAA 3 cut(s) 392, 680, 753
SatI GCNGC 1 cut(s) 243
Sau3AI GATC 6 cut(s) 13, 195, 231, 285, 409, 586
Sau96I GGNCC 1 cut(s) 45
SchI GAGTC 1 cut(s) 600
SduI GDGCHC 2 cut(s) 42, 333
SfaNI GCATC 1 cut(s) 229
SfoI GGCGCC 1 cut(s) 659
SmlI CTYRAG 1 cut(s) 541
SmoI CTYRAG 1 cut(s) 541
SphI GCATGC 1 cut(s) 171
Sse9I AATT 3 cut(s) 251, 850, 1006
SsiI CCGC 1 cut(s) 672
SspDI GGCGCC 1 cut(s) 657
SspMI CTAG 4 cut(s) 246, 512, 548, 908
StyI CCWWGG 3 cut(s) 202, 547, 918
TaaI ACNGT 1 cut(s) 685
TaiI ACGT 1 cut(s) 437
TaqI TCGA 1 cut(s) 234
TasI AATT 3 cut(s) 251, 850, 1006
TfiI GAWTC 3 cut(s) 567, 745, 988
Tru1I TTAA 3 cut(s) 392, 680, 753
Tru9I TTAA 3 cut(s) 392, 680, 753
TscAI CASTG 2 cut(s) 331, 381
TseFI GTSAC 2 cut(s) 58, 788
TseI GCWGC 1 cut(s) 242
Tsp45I GTSAC 2 cut(s) 58, 788
TspDTI ATGAA 3 cut(s) 13, 312, 951
TspGWI ACGGA 1 cut(s) 46
TspRI CASTG 2 cut(s) 331, 381
XapI RAATTY 2 cut(s) 251, 850
XceI RCATGY 1 cut(s) 171
XmaJI CCTAGG 1 cut(s) 547
XmnI GAANNNNTTC 1 cut(s) 868
XspI CTAG 4 cut(s) 246, 512, 548, 908
Zsp2I ATGCAT 1 cut(s) 169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.