TdcA1-ORF2 protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF4216 | PF13952 | 2 - 37 | 1.3e-09 | Domain of unknown function (DUF4216) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 146 |
| AclWI | GGATC | 1 cut(s) | 149 |
| AcoI | YGGCCR | 1 cut(s) | 54 |
| AcsI | RAATTY | 1 cut(s) | 63 |
| AfaI | GTAC | 2 cut(s) | 23, 38 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 18 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 50, 82 |
| AlwI | GGATC | 1 cut(s) | 149 |
| AoxI | GGCC | 2 cut(s) | 54, 87 |
| ApoI | RAATTY | 1 cut(s) | 63 |
| AspS9I | GGNCC | 1 cut(s) | 148 |
| AvaII | GGWCC | 1 cut(s) | 148 |
| BalI | TGGCCA | 1 cut(s) | 56 |
| BbsI | GAAGAC | 1 cut(s) | 36 |
| BccI | CCATC | 1 cut(s) | 93 |
| BclI | TGATCA | 1 cut(s) | 121 |
| BglII | AGATCT | 1 cut(s) | 79 |
| Bme18I | GGWCC | 1 cut(s) | 148 |
| BmgT120I | GGNCC | 1 cut(s) | 148 |
| BpiI | GAAGAC | 1 cut(s) | 36 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 18 |
| BseGI | GGATG | 1 cut(s) | 104 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 18 |
| BseRI | GAGGAG | 1 cut(s) | 188 |
| BshFI | GGCC | 2 cut(s) | 56, 89 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 18 |
| BsnI | GGCC | 2 cut(s) | 56, 89 |
| Bsp143I | GATC | 3 cut(s) | 79, 121, 154 |
| BspACI | CCGC | 1 cut(s) | 146 |
| BspANI | GGCC | 2 cut(s) | 56, 89 |
| BspPI | GGATC | 1 cut(s) | 149 |
| BssMI | GATC | 3 cut(s) | 79, 121, 154 |
| BstF5I | GGATG | 1 cut(s) | 104 |
| BstKTI | GATC | 3 cut(s) | 82, 124, 157 |
| BstMBI | GATC | 3 cut(s) | 79, 121, 154 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 53 |
| BstV2I | GAAGAC | 1 cut(s) | 36 |
| BstX2I | RGATCY | 2 cut(s) | 79, 154 |
| BstYI | RGATCY | 2 cut(s) | 79, 154 |
| BsuRI | GGCC | 2 cut(s) | 56, 89 |
| BtsCI | GGATG | 1 cut(s) | 104 |
| Cfr13I | GGNCC | 1 cut(s) | 148 |
| CpoI | CGGWCCG | 1 cut(s) | 148 |
| Csp6I | GTAC | 2 cut(s) | 22, 37 |
| CspI | CGGWCCG | 1 cut(s) | 148 |
| CviJI | RGCY | 2 cut(s) | 56, 89 |
| CviKI_1 | RGCY | 2 cut(s) | 56, 89 |
| CviQI | GTAC | 2 cut(s) | 22, 37 |
| DpnI | GATC | 3 cut(s) | 81, 123, 156 |
| DpnII | GATC | 3 cut(s) | 79, 121, 154 |
| EaeI | YGGCCR | 1 cut(s) | 54 |
| Eco47I | GGWCC | 1 cut(s) | 148 |
| FaiI | YATR | 4 cut(s) | 27, 53, 138, 226 |
| FbaI | TGATCA | 1 cut(s) | 121 |
| FokI | GGATG | 1 cut(s) | 111 |
| HaeIII | GGCC | 2 cut(s) | 56, 89 |
| Hpy188I | TCNGA | 1 cut(s) | 114 |
| Hpy188III | TCNNGA | 1 cut(s) | 158 |
| HpyAV | CCTTC | 1 cut(s) | 87 |
| HpyCH4V | TGCA | 1 cut(s) | 224 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 53 |
| Ksp22I | TGATCA | 1 cut(s) | 121 |
| Kzo9I | GATC | 3 cut(s) | 79, 121, 154 |
| LpnPI | CCDG | 2 cut(s) | 103, 171 |
| MalI | GATC | 3 cut(s) | 81, 123, 156 |
| MboI | GATC | 3 cut(s) | 79, 121, 154 |
| MboII | GAAGA | 2 cut(s) | 41, 89 |
| MflI | RGATCY | 2 cut(s) | 79, 154 |
| MlsI | TGGCCA | 1 cut(s) | 56 |
| MluCI | AATT | 2 cut(s) | 63, 216 |
| MluNI | TGGCCA | 1 cut(s) | 56 |
| MnlI | CCTC | 1 cut(s) | 209 |
| Mox20I | TGGCCA | 1 cut(s) | 56 |
| MscI | TGGCCA | 1 cut(s) | 56 |
| Msp20I | TGGCCA | 1 cut(s) | 56 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 53 |
| NdeII | GATC | 3 cut(s) | 79, 121, 154 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 168 |
| PspPI | GGNCC | 1 cut(s) | 148 |
| PsuI | RGATCY | 2 cut(s) | 79, 154 |
| RsaI | GTAC | 2 cut(s) | 23, 38 |
| RsaNI | GTAC | 2 cut(s) | 22, 37 |
| Rsr2I | CGGWCCG | 1 cut(s) | 148 |
| RsrII | CGGWCCG | 1 cut(s) | 148 |
| Sau3AI | GATC | 3 cut(s) | 79, 121, 154 |
| Sau96I | GGNCC | 1 cut(s) | 148 |
| SgeI | CNNG | 5 cut(s) | 24, 46, 102, 164, 170 |
| SinI | GGWCC | 1 cut(s) | 148 |
| Sse9I | AATT | 2 cut(s) | 63, 216 |
| SsiI | CCGC | 1 cut(s) | 146 |
| TaqI | TCGA | 2 cut(s) | 75, 209 |
| TaqII | GACCGA | 1 cut(s) | 165 |
| TasI | AATT | 2 cut(s) | 63, 216 |
| TspDTI | ATGAA | 2 cut(s) | 17, 42 |
| VpaK11BI | GGWCC | 1 cut(s) | 148 |
| XapI | RAATTY | 1 cut(s) | 63 |