TdcA1-ORF2 protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 165 |
| AfaI | GTAC | 1 cut(s) | 85 |
| AgsI | TTSAA | 4 cut(s) | 170, 212, 228, 293 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 110, 142 |
| AluBI | AGCT | 1 cut(s) | 8 |
| AluI | AGCT | 1 cut(s) | 8 |
| Ama87I | CYCGRG | 1 cut(s) | 375 |
| ApeKI | GCWGC | 1 cut(s) | 8 |
| ApoI | RAATTY | 1 cut(s) | 165 |
| AsuNHI | GCTAGC | 1 cut(s) | 188 |
| AvaI | CYCGRG | 1 cut(s) | 375 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 75, 108 |
| BccI | CCATC | 1 cut(s) | 380 |
| BfaI | CTAG | 2 cut(s) | 189, 338 |
| BisI | GCNGC | 1 cut(s) | 9 |
| BlsI | GCNGC | 1 cut(s) | 10 |
| BmeT110I | CYCGRG | 1 cut(s) | 375 |
| BmsI | GCATC | 1 cut(s) | 70 |
| BmtI | GCTAGC | 1 cut(s) | 192 |
| BsaBI | GATNNNNATC | 1 cut(s) | 330 |
| Bse8I | GATNNNNATC | 1 cut(s) | 330 |
| BseGI | GGATG | 2 cut(s) | 136, 202 |
| BseJI | GATNNNNATC | 1 cut(s) | 330 |
| BsiHKCI | CYCGRG | 1 cut(s) | 375 |
| BsoBI | CYCGRG | 1 cut(s) | 375 |
| BspOI | GCTAGC | 1 cut(s) | 192 |
| Bst4CI | ACNGT | 1 cut(s) | 23 |
| Bst6I | CTCTTC | 2 cut(s) | 177, 241 |
| BstC8I | GCNNGC | 1 cut(s) | 190 |
| BstF5I | GGATG | 2 cut(s) | 136, 202 |
| BtsCI | GGATG | 2 cut(s) | 136, 202 |
| Cac8I | GCNNGC | 1 cut(s) | 190 |
| Csp6I | GTAC | 1 cut(s) | 84 |
| CviAII | CATG | 3 cut(s) | 31, 58, 87 |
| CviJI | RGCY | 4 cut(s) | 8, 78, 161, 188 |
| CviKI_1 | RGCY | 4 cut(s) | 8, 78, 161, 188 |
| CviQI | GTAC | 1 cut(s) | 84 |
| Eam1104I | CTCTTC | 2 cut(s) | 177, 241 |
| EarI | CTCTTC | 2 cut(s) | 177, 241 |
| Eco88I | CYCGRG | 1 cut(s) | 375 |
| EcoT22I | ATGCAT | 1 cut(s) | 63 |
| FaeI | CATG | 3 cut(s) | 34, 61, 90 |
| FaiI | YATR | 6 cut(s) | 32, 59, 88, 113, 305, 393 |
| FatI | CATG | 3 cut(s) | 30, 57, 86 |
| Fnu4HI | GCNGC | 1 cut(s) | 9 |
| FokI | GGATG | 2 cut(s) | 143, 189 |
| Fsp4HI | GCNGC | 1 cut(s) | 9 |
| FspBI | CTAG | 2 cut(s) | 189, 338 |
| GluI | GCNGC | 1 cut(s) | 9 |
| Hin1II | CATG | 3 cut(s) | 34, 61, 90 |
| HincII | GTYRAC | 1 cut(s) | 94 |
| HindII | GTYRAC | 1 cut(s) | 94 |
| HpaI | GTTAAC | 1 cut(s) | 94 |
| Hpy166II | GTNNAC | 1 cut(s) | 94 |
| Hpy188III | TCNNGA | 3 cut(s) | 338, 357, 377 |
| Hpy8I | GTNNAC | 1 cut(s) | 94 |
| HpyAV | CCTTC | 1 cut(s) | 136 |
| HpyCH4III | ACNGT | 1 cut(s) | 23 |
| HpyCH4V | TGCA | 2 cut(s) | 11, 61 |
| Hsp92II | CATG | 3 cut(s) | 34, 61, 90 |
| KspAI | GTTAAC | 1 cut(s) | 94 |
| LpnPI | CCDG | 2 cut(s) | 273, 342 |
| LweI | GCATC | 1 cut(s) | 70 |
| MaeI | CTAG | 2 cut(s) | 189, 338 |
| MaeIII | GTNAC | 2 cut(s) | 308, 395 |
| MboII | GAAGA | 5 cut(s) | 130, 191, 194, 258, 377 |
| MfeI | CAATTG | 1 cut(s) | 207 |
| MluCI | AATT | 9 cut(s) | 36, 46, 134, 155, 165, 207, 223, 264, 347 |
| MmeI | TCCRAC | 1 cut(s) | 108 |
| MnlI | CCTC | 3 cut(s) | 178, 337, 345 |
| Mph1103I | ATGCAT | 1 cut(s) | 63 |
| MseI | TTAA | 2 cut(s) | 93, 406 |
| MslI | CAYNNNNRTG | 1 cut(s) | 72 |
| MunI | CAATTG | 1 cut(s) | 207 |
| NheI | GCTAGC | 1 cut(s) | 188 |
| NlaIII | CATG | 3 cut(s) | 34, 61, 90 |
| NmuCI | GTSAC | 2 cut(s) | 308, 395 |
| NsiI | ATGCAT | 1 cut(s) | 63 |
| PaeR7I | CTCGAG | 1 cut(s) | 375 |
| PkrI | GCNGC | 1 cut(s) | 10 |
| RsaI | GTAC | 1 cut(s) | 85 |
| RsaNI | GTAC | 1 cut(s) | 84 |
| RseI | CAYNNNNRTG | 1 cut(s) | 72 |
| SaqAI | TTAA | 2 cut(s) | 93, 406 |
| SatI | GCNGC | 1 cut(s) | 9 |
| SetI | ASST | 3 cut(s) | 10, 76, 262 |
| SfaNI | GCATC | 1 cut(s) | 70 |
| Sfr274I | CTCGAG | 1 cut(s) | 375 |
| SlaI | CTCGAG | 1 cut(s) | 375 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 72 |
| SmlI | CTYRAG | 1 cut(s) | 375 |
| SmoI | CTYRAG | 1 cut(s) | 375 |
| Sse9I | AATT | 9 cut(s) | 36, 46, 134, 155, 165, 207, 223, 264, 347 |
| SspMI | CTAG | 2 cut(s) | 189, 338 |
| TaaI | ACNGT | 1 cut(s) | 23 |
| TaqI | TCGA | 2 cut(s) | 255, 376 |
| TasI | AATT | 9 cut(s) | 36, 46, 134, 155, 165, 207, 223, 264, 347 |
| Tru1I | TTAA | 2 cut(s) | 93, 406 |
| Tru9I | TTAA | 2 cut(s) | 93, 406 |
| TseFI | GTSAC | 2 cut(s) | 308, 395 |
| TseI | GCWGC | 1 cut(s) | 8 |
| Tsp45I | GTSAC | 2 cut(s) | 308, 395 |
| TspDTI | ATGAA | 4 cut(s) | 114, 147, 191, 378 |
| XapI | RAATTY | 1 cut(s) | 165 |
| XbaI | TCTAGA | 1 cut(s) | 337 |
| XhoI | CTCGAG | 1 cut(s) | 375 |
| XspI | CTAG | 2 cut(s) | 189, 338 |
| Zsp2I | ATGCAT | 1 cut(s) | 63 |