TdcA1-ORF2 protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 172 |
| AflIII | ACRYGT | 1 cut(s) | 46 |
| AgsI | TTSAA | 4 cut(s) | 82, 149, 197, 233 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 111, 143 |
| BccI | CCATC | 1 cut(s) | 182 |
| BsaAI | YACGTR | 1 cut(s) | 182 |
| Bse1I | ACTGG | 1 cut(s) | 168 |
| Bse3DI | GCAATG | 1 cut(s) | 144 |
| BseGI | GGATG | 4 cut(s) | 61, 210, 246, 307 |
| BseMI | GCAATG | 1 cut(s) | 144 |
| BseMII | CTCAG | 1 cut(s) | 288 |
| BseNI | ACTGG | 1 cut(s) | 168 |
| BsmI | GAATGC | 1 cut(s) | 77 |
| BspCNI | CTCAG | 1 cut(s) | 289 |
| BsrDI | GCAATG | 1 cut(s) | 144 |
| BsrI | ACTGG | 1 cut(s) | 168 |
| Bst4CI | ACNGT | 1 cut(s) | 208 |
| Bst6I | CTCTTC | 1 cut(s) | 66 |
| BstBAI | YACGTR | 1 cut(s) | 182 |
| BstDEI | CTNAG | 1 cut(s) | 297 |
| BstF5I | GGATG | 4 cut(s) | 61, 210, 246, 307 |
| BstSNI | TACGTA | 1 cut(s) | 182 |
| BtsCI | GGATG | 4 cut(s) | 61, 210, 246, 307 |
| Csp6I | GTAC | 1 cut(s) | 171 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 235, 270 |
| CviQI | GTAC | 1 cut(s) | 171 |
| DdeI | CTNAG | 1 cut(s) | 297 |
| Eam1104I | CTCTTC | 1 cut(s) | 66 |
| EarI | CTCTTC | 1 cut(s) | 66 |
| Eco105I | TACGTA | 1 cut(s) | 182 |
| FaiI | YATR | 3 cut(s) | 42, 110, 281 |
| FokI | GGATG | 4 cut(s) | 68, 197, 253, 314 |
| HinfI | GANTC | 2 cut(s) | 25, 89 |
| Hpy166II | GTNNAC | 2 cut(s) | 173, 246 |
| Hpy188I | TCNGA | 3 cut(s) | 30, 298, 321 |
| Hpy188III | TCNNGA | 2 cut(s) | 62, 149 |
| Hpy8I | GTNNAC | 2 cut(s) | 173, 246 |
| HpyCH4III | ACNGT | 1 cut(s) | 208 |
| HpyCH4IV | ACGT | 2 cut(s) | 48, 181 |
| HpyCH4V | TGCA | 2 cut(s) | 137, 292 |
| HpyF3I | CTNAG | 1 cut(s) | 297 |
| HpySE526I | ACGT | 2 cut(s) | 48, 181 |
| LpnPI | CCDG | 3 cut(s) | 75, 181, 213 |
| MaeII | ACGT | 2 cut(s) | 48, 181 |
| MaeIII | GTNAC | 1 cut(s) | 335 |
| MboII | GAAGA | 3 cut(s) | 43, 83, 131 |
| MluCI | AATT | 2 cut(s) | 287, 343 |
| MmeI | TCCRAC | 2 cut(s) | 109, 243 |
| MnlI | CCTC | 4 cut(s) | 67, 277, 292, 298 |
| MseI | TTAA | 2 cut(s) | 341, 346 |
| Mva1269I | GAATGC | 1 cut(s) | 77 |
| NmuCI | GTSAC | 1 cut(s) | 335 |
| PctI | GAATGC | 1 cut(s) | 77 |
| PfeI | GAWTC | 2 cut(s) | 25, 89 |
| Ppu21I | YACGTR | 1 cut(s) | 182 |
| RsaI | GTAC | 1 cut(s) | 172 |
| RsaNI | GTAC | 1 cut(s) | 171 |
| SaqAI | TTAA | 2 cut(s) | 341, 346 |
| SetI | ASST | 4 cut(s) | 10, 51, 184, 202 |
| SgeI | CNNG | 8 cut(s) | 27, 59, 74, 128, 161, 180, 212, 235 |
| SnaBI | TACGTA | 1 cut(s) | 182 |
| Sse9I | AATT | 2 cut(s) | 287, 343 |
| SspI | AATATT | 1 cut(s) | 157 |
| TaaI | ACNGT | 1 cut(s) | 208 |
| TaiI | ACGT | 2 cut(s) | 51, 184 |
| TasI | AATT | 2 cut(s) | 287, 343 |
| TatI | WGTACW | 1 cut(s) | 170 |
| TfiI | GAWTC | 2 cut(s) | 25, 89 |
| Tru1I | TTAA | 2 cut(s) | 341, 346 |
| Tru9I | TTAA | 2 cut(s) | 341, 346 |
| TseFI | GTSAC | 1 cut(s) | 335 |
| Tsp45I | GTSAC | 1 cut(s) | 335 |
| TspDTI | ATGAA | 4 cut(s) | 84, 138, 155, 253 |