Rh6DG153300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
22713424 .. 22723485
10062 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG153300.1

Sequence Viewer

Length: 369 bp
ATGGATGATGATTTTGTCTTTGACGGTGAGGATGATGGCGAGGATGACGATAATGCTTCAATGATGGACATGTTAAATGATGTTCAAGGGCCTTTACATATGGAGATAGATGATGAGACACAGGGTCTTGAAAATCCTCAATTACATCAAGAGGATATTGAGCCCGAAGTCATTGCTTCAAATGTTGAGAGTGACGAATGGATGGATGATGGTAGGTTTAATGATTTCATCTGTGATGATGTCAAAGAAAACGATACTGATTATGATGACAATGAAGAAATCATTTCAAGTGATGACAATATAACAGTGACAAAATGTCAAAACATCTTCGTTCGAACGTTTTCGGTGCCCAAAAGGCTAATGAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

122

Amino Acids

14.06

Weight (kDa)

4.05

Isoelectric Point (pI)

44.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 346
AclI AACGTT 1 cut(s) 338
AflIII ACRYGT 1 cut(s) 69
AgsI TTSAA 5 cut(s) 60, 86, 131, 180, 288
AhdI GACNNNNNGTC 2 cut(s) 123, 315
Alw26I GTCTC 1 cut(s) 110
AoxI GGCC 1 cut(s) 89
Asp700I GAANNNNTTC 1 cut(s) 340
AspS9I GGNCC 1 cut(s) 89
AsuHPI GGTGA 1 cut(s) 38
AsuII TTCGAA 1 cut(s) 334
BaeGI GKGCMC 1 cut(s) 351
BanI GGYRCC 1 cut(s) 346
BanII GRGCYC 1 cut(s) 165
BccI CCATC 4 cut(s) 29, 58, 196, 203
BcgI CGANNNNNNTGC 2 cut(s) 155, 189
BcoDI GTCTC 1 cut(s) 110
BglI GCCNNNNNGGC 1 cut(s) 355
BmeRI GACNNNNNGTC 2 cut(s) 123, 315
BmgT120I GGNCC 1 cut(s) 89
BmiI GGNNCC 1 cut(s) 348
Bpu14I TTCGAA 1 cut(s) 334
Bse3DI GCAATG 1 cut(s) 171
BseGI GGATG 5 cut(s) 10, 37, 49, 207, 211
BseMI GCAATG 1 cut(s) 171
BseSI GKGCMC 1 cut(s) 351
BshFI GGCC 1 cut(s) 91
BshNI GGYRCC 1 cut(s) 346
BsmAI GTCTC 1 cut(s) 110
BsnI GGCC 1 cut(s) 91
Bsp119I TTCGAA 1 cut(s) 334
Bsp1286I GDGCHC 2 cut(s) 165, 351
BspANI GGCC 1 cut(s) 91
BspLI GGNNCC 1 cut(s) 348
BspT104I TTCGAA 1 cut(s) 334
BspT107I GGYRCC 1 cut(s) 346
BsrDI GCAATG 1 cut(s) 171
Bst4CI ACNGT 2 cut(s) 26, 307
BstBI TTCGAA 1 cut(s) 334
BstF5I GGATG 5 cut(s) 10, 37, 49, 207, 211
BstMAI GTCTC 1 cut(s) 110
BstMWI GCNNNNNNNGC 1 cut(s) 355
BstNSI RCATGY 1 cut(s) 73
BstSLI GKGCMC 1 cut(s) 351
BsuRI GGCC 1 cut(s) 91
BtsCI GGATG 5 cut(s) 10, 37, 49, 207, 211
BtsIMutI CAGTG 1 cut(s) 312
Cfr13I GGNCC 1 cut(s) 89
CviAII CATG 1 cut(s) 70
CviJI RGCY 3 cut(s) 91, 163, 358
CviKI_1 RGCY 3 cut(s) 91, 163, 358
DriI GACNNNNNGTC 2 cut(s) 123, 315
Eam1105I GACNNNNNGTC 2 cut(s) 123, 315
Eco24I GRGCYC 1 cut(s) 165
EcoO109I RGGNCCY 1 cut(s) 89
EcoT38I GRGCYC 1 cut(s) 165
FaeI CATG 1 cut(s) 73
FaiI YATR 5 cut(s) 71, 99, 101, 264, 302
FatI CATG 1 cut(s) 69
FauNDI CATATG 1 cut(s) 99
FokI GGATG 5 cut(s) 17, 44, 56, 214, 218
FriOI GRGCYC 1 cut(s) 165
HaeIII GGCC 1 cut(s) 91
Hin1II CATG 1 cut(s) 73
HphI GGTGA 1 cut(s) 38
Hpy188III TCNNGA 2 cut(s) 128, 149
HpyCH4III ACNGT 2 cut(s) 26, 307
HpyCH4IV ACGT 1 cut(s) 338
HpyF10VI GCNNNNNNNGC 1 cut(s) 355
HpySE526I ACGT 1 cut(s) 338
Hsp92II CATG 1 cut(s) 73
LpnPI CCDG 1 cut(s) 107
MaeII ACGT 1 cut(s) 338
MaeIII GTNAC 2 cut(s) 191, 307
MboII GAAGA 2 cut(s) 287, 319
MhlI GDGCHC 2 cut(s) 165, 351
MluCI AATT 1 cut(s) 140
MnlI CCTC 4 cut(s) 22, 34, 145, 147
MroXI GAANNNNTTC 1 cut(s) 340
MseI TTAA 2 cut(s) 74, 219
MwoI GCNNNNNNNGC 1 cut(s) 355
NdeI CATATG 1 cut(s) 99
NlaIII CATG 1 cut(s) 73
NlaIV GGNNCC 1 cut(s) 348
NmuCI GTSAC 2 cut(s) 191, 307
NspI RCATGY 1 cut(s) 73
NspV TTCGAA 1 cut(s) 334
PciI ACATGT 1 cut(s) 69
PdmI GAANNNNTTC 1 cut(s) 340
PscI ACATGT 1 cut(s) 69
Psp1406I AACGTT 1 cut(s) 338
PspN4I GGNNCC 1 cut(s) 348
PspPI GGNCC 1 cut(s) 89
SaqAI TTAA 2 cut(s) 74, 219
Sau96I GGNCC 1 cut(s) 89
SduI GDGCHC 2 cut(s) 165, 351
SetI ASST 2 cut(s) 218, 341
SfuI TTCGAA 1 cut(s) 334
SgeI CNNG 8 cut(s) 52, 82, 98, 134, 140, 161, 176, 300
Sse9I AATT 1 cut(s) 140
TaaI ACNGT 2 cut(s) 26, 307
TaiI ACGT 1 cut(s) 341
TaqI TCGA 1 cut(s) 334
TasI AATT 1 cut(s) 140
Tru1I TTAA 2 cut(s) 74, 219
Tru9I TTAA 2 cut(s) 74, 219
TscAI CASTG 1 cut(s) 312
TseFI GTSAC 2 cut(s) 191, 307
Tsp45I GTSAC 2 cut(s) 191, 307
TspDTI ATGAA 2 cut(s) 217, 288
TspRI CASTG 1 cut(s) 312
XceI RCATGY 1 cut(s) 73
XmnI GAANNNNTTC 1 cut(s) 340
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.