TdcA1-ORF2 protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 188 |
| AfaI | GTAC | 2 cut(s) | 28, 185 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 250, 251, 409 |
| AflIII | ACRYGT | 1 cut(s) | 292 |
| AgsI | TTSAA | 6 cut(s) | 71, 97, 215, 275, 284, 425 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 570, 602 |
| AlwI | GGATC | 1 cut(s) | 188 |
| AsuHPI | GGTGA | 2 cut(s) | 365, 461 |
| AsuNHI | GCTAGC | 1 cut(s) | 205 |
| BccI | CCATC | 3 cut(s) | 174, 400, 440 |
| BfaI | CTAG | 2 cut(s) | 206, 288 |
| BmsI | GCATC | 1 cut(s) | 523 |
| BmtI | GCTAGC | 1 cut(s) | 209 |
| BsaBI | GATNNNNATC | 1 cut(s) | 150 |
| BsaJI | CCNNGG | 1 cut(s) | 260 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 250, 251, 409 |
| Bse3DI | GCAATG | 1 cut(s) | 488 |
| Bse8I | GATNNNNATC | 1 cut(s) | 150 |
| BseDI | CCNNGG | 1 cut(s) | 260 |
| BseGI | GGATG | 4 cut(s) | 256, 307, 418, 556 |
| BseJI | GATNNNNATC | 1 cut(s) | 150 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 250, 251, 409 |
| BseMI | GCAATG | 1 cut(s) | 488 |
| BseMII | CTCAG | 1 cut(s) | 61 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 250, 251, 409 |
| Bsp143I | GATC | 2 cut(s) | 193, 220 |
| Bsp19I | CCATGG | 1 cut(s) | 260 |
| BspCNI | CTCAG | 1 cut(s) | 60 |
| BspOI | GCTAGC | 1 cut(s) | 209 |
| BspPI | GGATC | 1 cut(s) | 188 |
| BsrDI | GCAATG | 1 cut(s) | 488 |
| BssECI | CCNNGG | 1 cut(s) | 260 |
| BssMI | GATC | 2 cut(s) | 193, 220 |
| BssT1I | CCWWGG | 1 cut(s) | 260 |
| BstC8I | GCNNGC | 1 cut(s) | 207 |
| BstDEI | CTNAG | 2 cut(s) | 47, 469 |
| BstDSI | CCRYGG | 1 cut(s) | 260 |
| BstF5I | GGATG | 4 cut(s) | 256, 307, 418, 556 |
| BstKTI | GATC | 2 cut(s) | 196, 223 |
| BstMBI | GATC | 2 cut(s) | 193, 220 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 215 |
| BstNSI | RCATGY | 1 cut(s) | 296 |
| BtgI | CCRYGG | 1 cut(s) | 260 |
| BtsCI | GGATG | 4 cut(s) | 256, 307, 418, 556 |
| BtsIMutI | CAGTG | 1 cut(s) | 55 |
| Cac8I | GCNNGC | 1 cut(s) | 207 |
| Csp6I | GTAC | 2 cut(s) | 27, 184 |
| CviAII | CATG | 4 cut(s) | 11, 261, 293, 388 |
| CviJI | RGCY | 3 cut(s) | 23, 78, 454 |
| CviKI_1 | RGCY | 3 cut(s) | 23, 78, 454 |
| CviQI | GTAC | 2 cut(s) | 27, 184 |
| DdeI | CTNAG | 2 cut(s) | 47, 469 |
| DpnI | GATC | 2 cut(s) | 195, 222 |
| DpnII | GATC | 2 cut(s) | 193, 220 |
| Eco130I | CCWWGG | 1 cut(s) | 260 |
| EcoT14I | CCWWGG | 1 cut(s) | 260 |
| ErhI | CCWWGG | 1 cut(s) | 260 |
| FaeI | CATG | 4 cut(s) | 14, 264, 296, 391 |
| FatI | CATG | 4 cut(s) | 10, 260, 292, 387 |
| FauNDI | CATATG | 1 cut(s) | 199 |
| FokI | GGATG | 4 cut(s) | 243, 314, 425, 563 |
| FspBI | CTAG | 2 cut(s) | 206, 288 |
| Hin1II | CATG | 4 cut(s) | 14, 264, 296, 391 |
| HinfI | GANTC | 2 cut(s) | 280, 476 |
| HphI | GGTGA | 2 cut(s) | 365, 461 |
| Hpy188III | TCNNGA | 2 cut(s) | 236, 403 |
| HpyAV | CCTTC | 1 cut(s) | 8 |
| HpyCH4IV | ACGT | 1 cut(s) | 540 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 215 |
| HpyF3I | CTNAG | 2 cut(s) | 47, 469 |
| HpySE526I | ACGT | 1 cut(s) | 540 |
| Hsp92II | CATG | 4 cut(s) | 14, 264, 296, 391 |
| Kzo9I | GATC | 2 cut(s) | 193, 220 |
| LpnPI | CCDG | 5 cut(s) | 37, 102, 321, 416, 468 |
| LweI | GCATC | 1 cut(s) | 523 |
| MaeI | CTAG | 2 cut(s) | 206, 288 |
| MaeII | ACGT | 1 cut(s) | 540 |
| MaeIII | GTNAC | 2 cut(s) | 6, 377 |
| MalI | GATC | 2 cut(s) | 195, 222 |
| MboI | GATC | 2 cut(s) | 193, 220 |
| MboII | GAAGA | 4 cut(s) | 151, 329, 338, 590 |
| MfeI | CAATTG | 2 cut(s) | 97, 210 |
| MluCI | AATT | 6 cut(s) | 65, 71, 97, 210, 420, 495 |
| MnlI | CCTC | 3 cut(s) | 403, 541, 589 |
| MseI | TTAA | 3 cut(s) | 57, 81, 165 |
| MslI | CAYNNNNRTG | 1 cut(s) | 386 |
| MunI | CAATTG | 2 cut(s) | 97, 210 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 215 |
| NcoI | CCATGG | 1 cut(s) | 260 |
| NdeI | CATATG | 1 cut(s) | 199 |
| NdeII | GATC | 2 cut(s) | 193, 220 |
| NheI | GCTAGC | 1 cut(s) | 205 |
| NlaIII | CATG | 4 cut(s) | 14, 264, 296, 391 |
| NmuCI | GTSAC | 2 cut(s) | 6, 377 |
| NspI | RCATGY | 1 cut(s) | 296 |
| PciI | ACATGT | 1 cut(s) | 292 |
| PfeI | GAWTC | 2 cut(s) | 280, 476 |
| PscI | ACATGT | 1 cut(s) | 292 |
| RsaI | GTAC | 2 cut(s) | 28, 185 |
| RsaNI | GTAC | 2 cut(s) | 27, 184 |
| RseI | CAYNNNNRTG | 1 cut(s) | 386 |
| SaqAI | TTAA | 3 cut(s) | 57, 81, 165 |
| Sau3AI | GATC | 2 cut(s) | 193, 220 |
| SetI | ASST | 4 cut(s) | 87, 289, 488, 543 |
| SfaNI | GCATC | 1 cut(s) | 523 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 386 |
| Sse9I | AATT | 6 cut(s) | 65, 71, 97, 210, 420, 495 |
| SspMI | CTAG | 2 cut(s) | 206, 288 |
| StyI | CCWWGG | 1 cut(s) | 260 |
| TaiI | ACGT | 1 cut(s) | 543 |
| TaqI | TCGA | 2 cut(s) | 178, 237 |
| TasI | AATT | 6 cut(s) | 65, 71, 97, 210, 420, 495 |
| TatI | WGTACW | 1 cut(s) | 26 |
| TfiI | GAWTC | 2 cut(s) | 280, 476 |
| Tru1I | TTAA | 3 cut(s) | 57, 81, 165 |
| Tru9I | TTAA | 3 cut(s) | 57, 81, 165 |
| TscAI | CASTG | 1 cut(s) | 55 |
| TseFI | GTSAC | 2 cut(s) | 6, 377 |
| Tsp45I | GTSAC | 2 cut(s) | 6, 377 |
| TspDTI | ATGAA | 7 cut(s) | 27, 339, 432, 511, 570, 585, 591 |
| TspRI | CASTG | 1 cut(s) | 55 |
| XceI | RCATGY | 1 cut(s) | 296 |
| XspI | CTAG | 2 cut(s) | 206, 288 |