Transposase family tnp2
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transpos_assoc | PF13963 | 3 - 43 | 4.4e-08 | Transposase-associated domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 44 |
| AcuI | CTGAAG | 1 cut(s) | 183 |
| AfaI | GTAC | 1 cut(s) | 20 |
| AgsI | TTSAA | 5 cut(s) | 25, 38, 177, 242, 285 |
| Alw26I | GTCTC | 1 cut(s) | 62 |
| ApeKI | GCWGC | 1 cut(s) | 77 |
| ApoI | RAATTY | 1 cut(s) | 44 |
| AspS9I | GGNCC | 1 cut(s) | 4 |
| AvaII | GGWCC | 1 cut(s) | 4 |
| BbvI | GCAGC | 1 cut(s) | 64 |
| BccI | CCATC | 1 cut(s) | 200 |
| BcoDI | GTCTC | 1 cut(s) | 62 |
| BisI | GCNGC | 1 cut(s) | 78 |
| BlsI | GCNGC | 1 cut(s) | 79 |
| Bme18I | GGWCC | 1 cut(s) | 4 |
| BmgT120I | GGNCC | 1 cut(s) | 4 |
| BmsI | GCATC | 1 cut(s) | 64 |
| Bse3DI | GCAATG | 2 cut(s) | 112, 168 |
| BseGI | GGATG | 2 cut(s) | 21, 79 |
| BseMI | GCAATG | 2 cut(s) | 112, 168 |
| BseXI | GCAGC | 1 cut(s) | 64 |
| BsmAI | GTCTC | 1 cut(s) | 62 |
| BsrDI | GCAATG | 2 cut(s) | 112, 168 |
| BstF5I | GGATG | 2 cut(s) | 21, 79 |
| BstMAI | GTCTC | 1 cut(s) | 62 |
| BstV1I | GCAGC | 1 cut(s) | 64 |
| BtsCI | GGATG | 2 cut(s) | 21, 79 |
| Cfr13I | GGNCC | 1 cut(s) | 4 |
| Csp6I | GTAC | 1 cut(s) | 19 |
| CviJI | RGCY | 2 cut(s) | 160, 214 |
| CviKI_1 | RGCY | 2 cut(s) | 160, 214 |
| CviQI | GTAC | 1 cut(s) | 19 |
| Eco47I | GGWCC | 1 cut(s) | 4 |
| Eco57I | CTGAAG | 1 cut(s) | 183 |
| FaiI | YATR | 4 cut(s) | 30, 71, 142, 261 |
| Fnu4HI | GCNGC | 1 cut(s) | 78 |
| FokI | GGATG | 2 cut(s) | 28, 86 |
| Fsp4HI | GCNGC | 1 cut(s) | 78 |
| GluI | GCNGC | 1 cut(s) | 78 |
| Hpy188III | TCNNGA | 3 cut(s) | 125, 146, 184 |
| HpyCH4V | TGCA | 1 cut(s) | 80 |
| LpnPI | CCDG | 3 cut(s) | 54, 104, 174 |
| Lsp1109I | GCAGC | 1 cut(s) | 64 |
| LweI | GCATC | 1 cut(s) | 64 |
| MaeIII | GTNAC | 1 cut(s) | 188 |
| MboII | GAAGA | 2 cut(s) | 254, 284 |
| MluCI | AATT | 3 cut(s) | 44, 62, 137 |
| MnlI | CCTC | 2 cut(s) | 142, 144 |
| MseI | TTAA | 1 cut(s) | 216 |
| NmuCI | GTSAC | 1 cut(s) | 188 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 189 |
| PkrI | GCNGC | 1 cut(s) | 79 |
| PspPI | GGNCC | 1 cut(s) | 4 |
| RsaI | GTAC | 1 cut(s) | 20 |
| RsaNI | GTAC | 1 cut(s) | 19 |
| SaqAI | TTAA | 1 cut(s) | 216 |
| SatI | GCNGC | 1 cut(s) | 78 |
| Sau96I | GGNCC | 1 cut(s) | 4 |
| SetI | ASST | 1 cut(s) | 93 |
| SfaNI | GCATC | 1 cut(s) | 64 |
| SgeI | CNNG | 9 cut(s) | 34, 53, 103, 132, 137, 158, 173, 196, 297 |
| SinI | GGWCC | 1 cut(s) | 4 |
| Sse9I | AATT | 3 cut(s) | 44, 62, 137 |
| TaqI | TCGA | 1 cut(s) | 183 |
| TaqII | GACCGA | 1 cut(s) | 21 |
| TasI | AATT | 3 cut(s) | 44, 62, 137 |
| TatI | WGTACW | 1 cut(s) | 18 |
| Tru1I | TTAA | 1 cut(s) | 216 |
| Tru9I | TTAA | 1 cut(s) | 216 |
| TseFI | GTSAC | 1 cut(s) | 188 |
| TseI | GCWGC | 1 cut(s) | 77 |
| Tsp45I | GTSAC | 1 cut(s) | 188 |
| TspDTI | ATGAA | 2 cut(s) | 214, 285 |
| VpaK11BI | GGWCC | 1 cut(s) | 4 |
| XapI | RAATTY | 1 cut(s) | 44 |