pycom10g19040

MOSC domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0001394
Physical Location & Seq
Forward (+)
22231095 .. 22234070
2976 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g19040.8

Sequence Viewer

Length: 933 bp
ATGGAGAAGGCAGGAGCAGCAGAAGCCATAGCCAAGGTCTCATCAATCTTCATATACCCAGTAAAATCATGCCGCGGAATTTCAGTGTCCCAAGCTCCTCTCACTCCAACTGGATTTCGATGGGATCGGCAGTGGTTAGTTGTAAACTCCAAAGGAAGAGCATATACTCAAAGAGTTGAACCAAGGCTTGCTTTGGTTGAGGTAGAGCTGCCAAATGAGGCGTTTGTCGAGGGTTGGGAACCTACCAAAAGCTCTTATCTAGTACTAAAAGCACCTGGCATGGATGTACTTAAGGTTTCGTTGAGTGCACCACGAGAAATAGCAGATGGGGTTTCCATGTGGGAATGGTCTGGTTCTGCATTAGATGAAGGAAATGCTGCATCAAAATGGTTTTCAGATTATTTTGGGAAACCCAGTCGACTTGTTCGCTTTAATACAGATTCAGAAACTAGGCCTGTGGAACCCGAATATGCTCCAGGATACAAAACCATGTTCTCCGACATGTATCCTTACATGCTAATATCTCAGGGATCAATGGATGCACTGAATCAGCTTCTGATGGAACCCATACCAATTAACCGTTTTAGACCCAATATTCTTGTTGATGGTTGCGAACCATTTTCTGAGGACTTGTGGACAGAAATCAAAATAGACAAACTCACATTTCTCGGTGTCAAGCTATGCTCCCGTTGTAAGGTACCTACGATCAATCAAGACACTGGCATTGCAGGGCCCGAGCCAAATAACACTCTTAAGAATATCCGATCTGATACAGTTTTGCGTCCGACGCGAAAACAGCAAGGAAAGGTTTACTTTGGGCAGAACCTAGTTTGCAAAAGCTTCCTTACTGGGCAGAAGGGAAATGTCGTAACGGTTGGAGATCTGGTTTATGTCCTTAACAAAGTCTCTTCTACTGATGAAGCAGCAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MOSC MOSC_N

Protein Analysis

311

Amino Acids

34.45

Weight (kDa)

7.51

Isoelectric Point (pI)

35.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 697
AccB1I GGYRCC 1 cut(s) 697
AccI GTMKAC 1 cut(s) 418
AccII CGCG 2 cut(s) 75, 790
AciI CCGC 2 cut(s) 73, 75
AclWI GGATC 2 cut(s) 132, 538
AcsI RAATTY 1 cut(s) 78
AfaI GTAC 3 cut(s) 264, 288, 699
AfiI CCNNNNNNNGG 1 cut(s) 694
AflII CTTAAG 2 cut(s) 290, 752
AflIII ACRYGT 1 cut(s) 501
AgsI TTSAA 1 cut(s) 179
AjnI CCWGG 2 cut(s) 274, 475
AluBI AGCT 6 cut(s) 95, 208, 252, 553, 679, 840
AluI AGCT 6 cut(s) 95, 208, 252, 553, 679, 840
Alw21I GWGCWC 1 cut(s) 310
Alw26I GTCTC 2 cut(s) 43, 910
Alw44I GTGCAC 1 cut(s) 306
AlwI GGATC 2 cut(s) 132, 538
AlwNI CAGNNNCTG 1 cut(s) 556
Ama87I CYCGRG 1 cut(s) 734
AoxI GGCC 2 cut(s) 452, 731
ApaI GGGCCC 1 cut(s) 735
ApaLI GTGCAC 1 cut(s) 306
ApeKI GCWGC 5 cut(s) 17, 208, 377, 923, 926
ApoI RAATTY 1 cut(s) 78
Asp718I GGTACC 1 cut(s) 697
AspS9I GGNCC 2 cut(s) 731, 732
AvaI CYCGRG 1 cut(s) 734
BaeGI GKGCMC 2 cut(s) 310, 735
BanI GGYRCC 1 cut(s) 697
BanII GRGCYC 1 cut(s) 735
BarI GAAGNNNNNNTAC 2 cut(s) 148, 180
BauI CACGAG 1 cut(s) 312
Bbv12I GWGCWC 1 cut(s) 310
BbvI GCAGC 3 cut(s) 29, 195, 364
BccI CCATC 4 cut(s) 114, 320, 553, 599
BciT130I CCWGG 2 cut(s) 276, 477
BciVI GTATCC 2 cut(s) 473, 516
BcoDI GTCTC 2 cut(s) 43, 910
BfaI CTAG 3 cut(s) 260, 450, 827
BfrI CTTAAG 2 cut(s) 290, 752
BfuI GTATCC 2 cut(s) 473, 516
BglII AGATCT 1 cut(s) 880
BisI GCNGC 6 cut(s) 18, 73, 209, 378, 924, 927
BlsI GCNGC 6 cut(s) 19, 74, 210, 379, 925, 928
BmcAI AGTACT 1 cut(s) 264
Bme1390I CCNGG 2 cut(s) 276, 477
BmeT110I CYCGRG 1 cut(s) 734
BmgT120I GGNCC 2 cut(s) 731, 732
BmiI GGNNCC 5 cut(s) 240, 462, 564, 699, 733
BmrFI CCNGG 2 cut(s) 276, 477
BmrI ACTGGG 3 cut(s) 53, 408, 858
BmsI GCATC 2 cut(s) 389, 529
BmuI ACTGGG 3 cut(s) 53, 408, 858
BpmI CTGGAG 1 cut(s) 459
BsaI GGTCTC 1 cut(s) 43
BsaJI CCNNGG 3 cut(s) 33, 73, 182
BsaXI ACNNNNNCTCC 2 cut(s) 870, 900
Bsc4I CCNNNNNNNGG 1 cut(s) 694
Bse1I ACTGG 5 cut(s) 59, 115, 414, 724, 853
Bse3DI GCAATG 1 cut(s) 723
BseBI CCWGG 2 cut(s) 276, 477
BseDI CCNNGG 3 cut(s) 33, 73, 182
BseGI GGATG 2 cut(s) 289, 544
BseLI CCNNNNNNNGG 1 cut(s) 694
BseMI GCAATG 1 cut(s) 723
BseMII CTCAG 2 cut(s) 539, 615
BseNI ACTGG 5 cut(s) 59, 115, 414, 724, 853
BseRI GAGGAG 1 cut(s) 87
BseSI GKGCMC 2 cut(s) 310, 735
BseXI GCAGC 3 cut(s) 29, 195, 364
Bsh1236I CGCG 2 cut(s) 75, 790
BshFI GGCC 2 cut(s) 454, 733
BshNI GGYRCC 1 cut(s) 697
BsiHKAI GWGCWC 1 cut(s) 310
BsiHKCI CYCGRG 1 cut(s) 734
BslFI GGGAC 1 cut(s) 73
BslI CCNNNNNNNGG 1 cut(s) 694
BsmAI GTCTC 2 cut(s) 43, 910
BsmFI GGGAC 1 cut(s) 73
BsnI GGCC 2 cut(s) 454, 733
Bso31I GGTCTC 1 cut(s) 43
BsoBI CYCGRG 1 cut(s) 734
Bsp120I GGGCCC 1 cut(s) 731
Bsp1286I GDGCHC 2 cut(s) 310, 735
Bsp143I GATC 5 cut(s) 124, 530, 705, 764, 880
BspACI CCGC 2 cut(s) 73, 75
BspANI GGCC 2 cut(s) 454, 733
BspCNI CTCAG 2 cut(s) 538, 616
BspFNI CGCG 2 cut(s) 75, 790
BspLI GGNNCC 5 cut(s) 240, 462, 564, 699, 733
BspPI GGATC 2 cut(s) 132, 538
BspQI GCTCTTC 1 cut(s) 151
BspT107I GGYRCC 1 cut(s) 697
BspTI CTTAAG 2 cut(s) 290, 752
BspTNI GGTCTC 1 cut(s) 43
BsrDI GCAATG 1 cut(s) 723
BsrI ACTGG 5 cut(s) 59, 115, 414, 724, 853
BssECI CCNNGG 3 cut(s) 33, 73, 182
BssMI GATC 5 cut(s) 124, 530, 705, 764, 880
BssSI CACGAG 1 cut(s) 312
BssT1I CCWWGG 2 cut(s) 33, 182
Bst2BI CACGAG 1 cut(s) 312
Bst2UI CCWGG 2 cut(s) 276, 477
Bst4CI ACNGT 3 cut(s) 581, 775, 874
Bst6I CTCTTC 2 cut(s) 151, 913
BstAFI CTTAAG 2 cut(s) 290, 752
BstC8I GCNNGC 1 cut(s) 189
BstDEI CTNAG 2 cut(s) 525, 624
BstDSI CCRYGG 1 cut(s) 73
BstF5I GGATG 2 cut(s) 289, 544
BstFNI CGCG 2 cut(s) 75, 790
BstKTI GATC 5 cut(s) 127, 533, 708, 767, 883
BstMAI GTCTC 2 cut(s) 43, 910
BstMBI GATC 5 cut(s) 124, 530, 705, 764, 880
BstMWI GCNNNNNNNGC 4 cut(s) 17, 23, 787, 796
BstNI CCWGG 2 cut(s) 276, 477
BstNSI RCATGY 2 cut(s) 505, 517
BstSCI CCNGG 2 cut(s) 274, 475
BstSLI GKGCMC 2 cut(s) 310, 735
BstUI CGCG 2 cut(s) 75, 790
BstV1I GCAGC 3 cut(s) 29, 195, 364
BstX2I RGATCY 1 cut(s) 880
BstYI RGATCY 1 cut(s) 880
BsuI GTATCC 2 cut(s) 473, 516
BsuRI GGCC 2 cut(s) 454, 733
BtgI CCRYGG 1 cut(s) 73
BtsCI GGATG 2 cut(s) 289, 544
BtsI GCAGTG 1 cut(s) 137
BtsIMutI CAGTG 4 cut(s) 90, 137, 542, 717
Cac8I GCNNGC 1 cut(s) 189
CaiI CAGNNNCTG 1 cut(s) 556
Cfr13I GGNCC 2 cut(s) 731, 732
Cfr42I CCGCGG 1 cut(s) 76
CseI GACGC 2 cut(s) 770, 796
Csp6I GTAC 3 cut(s) 263, 287, 698
CviAII CATG 7 cut(s) 69, 280, 337, 490, 502, 514, 930
CviQI GTAC 3 cut(s) 263, 287, 698
DdeI CTNAG 2 cut(s) 525, 624
DpnI GATC 5 cut(s) 126, 532, 707, 766, 882
DpnII GATC 5 cut(s) 124, 530, 705, 764, 880
Eam1104I CTCTTC 2 cut(s) 151, 913
EarI CTCTTC 2 cut(s) 151, 913
Eco130I CCWWGG 2 cut(s) 33, 182
Eco147I AGGCCT 1 cut(s) 454
Eco24I GRGCYC 1 cut(s) 735
Eco31I GGTCTC 1 cut(s) 43
Eco88I CYCGRG 1 cut(s) 734
EcoO109I RGGNCCY 1 cut(s) 731
EcoRII CCWGG 2 cut(s) 274, 475
EcoT14I CCWWGG 2 cut(s) 33, 182
EcoT38I GRGCYC 1 cut(s) 735
ErhI CCWWGG 2 cut(s) 33, 182
FaeI CATG 7 cut(s) 72, 283, 340, 493, 505, 517, 933
FalI AAGNNNNNCTT 4 cut(s) 175, 207, 797, 829
FaqI GGGAC 1 cut(s) 73
FatI CATG 7 cut(s) 68, 279, 336, 489, 501, 513, 929
FblI GTMKAC 1 cut(s) 418
Fnu4HI GCNGC 6 cut(s) 18, 73, 209, 378, 924, 927
FokI GGATG 2 cut(s) 296, 551
FriOI GRGCYC 1 cut(s) 735
Fsp4HI GCNGC 6 cut(s) 18, 73, 209, 378, 924, 927
FspBI CTAG 3 cut(s) 260, 450, 827
GluI GCNGC 6 cut(s) 18, 73, 209, 378, 924, 927
GsuI CTGGAG 1 cut(s) 459
HaeIII GGCC 2 cut(s) 454, 733
HgaI GACGC 2 cut(s) 770, 796
Hin1II CATG 7 cut(s) 72, 283, 340, 493, 505, 517, 933
HincII GTYRAC 1 cut(s) 419
HindII GTYRAC 1 cut(s) 419
HindIII AAGCTT 1 cut(s) 838
HinfI GANTC 2 cut(s) 440, 547
Hpy166II GTNNAC 5 cut(s) 145, 308, 419, 636, 811
Hpy188I TCNGA 8 cut(s) 397, 445, 499, 558, 625, 764, 769, 786
Hpy188III TCNNGA 1 cut(s) 713
Hpy8I GTNNAC 5 cut(s) 145, 308, 419, 636, 811
Hpy99I CGWCG 1 cut(s) 790
HpyAV CCTTC 2 cut(s) 362, 850
HpyCH4III ACNGT 3 cut(s) 581, 775, 874
HpyCH4V TGCA 6 cut(s) 308, 359, 380, 542, 728, 834
HpyF10VI GCNNNNNNNGC 4 cut(s) 17, 23, 787, 796
HpyF3I CTNAG 2 cut(s) 525, 624
Hsp92II CATG 7 cut(s) 72, 283, 340, 493, 505, 517, 933
KpnI GGTACC 1 cut(s) 701
KspI CCGCGG 1 cut(s) 76
Kzo9I GATC 5 cut(s) 124, 530, 705, 764, 880
LguI GCTCTTC 1 cut(s) 151
LmnI GCTCC 4 cut(s) 14, 100, 478, 689
Lsp1109I GCAGC 3 cut(s) 29, 195, 364
LweI GCATC 2 cut(s) 389, 529
MaeI CTAG 3 cut(s) 260, 450, 827
MaeIII GTNAC 1 cut(s) 868
MalI GATC 5 cut(s) 126, 532, 707, 766, 882
MboI GATC 5 cut(s) 124, 530, 705, 764, 880
MboII GAAGA 3 cut(s) 40, 168, 900
MflI RGATCY 1 cut(s) 880
MhlI GDGCHC 2 cut(s) 310, 735
MluCI AATT 2 cut(s) 78, 573
MmeI TCCRAC 4 cut(s) 131, 522, 809, 856
MnlI CCTC 5 cut(s) 108, 193, 211, 223, 619
MseI TTAA 5 cut(s) 291, 432, 576, 753, 897
MslI CAYNNNNRTG 1 cut(s) 385
MspA1I CMGCKG 1 cut(s) 75
MspCI CTTAAG 2 cut(s) 290, 752
MspR9I CCNGG 2 cut(s) 276, 477
MvaI CCWGG 2 cut(s) 276, 477
MvnI CGCG 2 cut(s) 75, 790
MwoI GCNNNNNNNGC 4 cut(s) 17, 23, 787, 796
NdeII GATC 5 cut(s) 124, 530, 705, 764, 880
NlaIII CATG 7 cut(s) 72, 283, 340, 493, 505, 517, 933
NlaIV GGNNCC 5 cut(s) 240, 462, 564, 699, 733
NspI RCATGY 2 cut(s) 505, 517
PceI AGGCCT 1 cut(s) 454
PciI ACATGT 1 cut(s) 501
PciSI GCTCTTC 1 cut(s) 151
PfeI GAWTC 2 cut(s) 440, 547
PfoI TCCNGGA 1 cut(s) 475
PkrI GCNGC 6 cut(s) 19, 74, 210, 379, 925, 928
PscI ACATGT 1 cut(s) 501
Psp6I CCWGG 2 cut(s) 274, 475
PspGI CCWGG 2 cut(s) 274, 475
PspN4I GGNNCC 5 cut(s) 240, 462, 564, 699, 733
PspOMI GGGCCC 1 cut(s) 731
PspPI GGNCC 2 cut(s) 731, 732
PstNI CAGNNNCTG 1 cut(s) 556
PsuI RGATCY 1 cut(s) 880
RsaI GTAC 3 cut(s) 264, 288, 699
RsaNI GTAC 3 cut(s) 263, 287, 698
RseI CAYNNNNRTG 1 cut(s) 385
SacII CCGCGG 1 cut(s) 76
SalI GTCGAC 1 cut(s) 417
SapI GCTCTTC 1 cut(s) 151
SaqAI TTAA 5 cut(s) 291, 432, 576, 753, 897
SatI GCNGC 6 cut(s) 18, 73, 209, 378, 924, 927
Sau3AI GATC 5 cut(s) 124, 530, 705, 764, 880
Sau96I GGNCC 2 cut(s) 731, 732
ScaI AGTACT 1 cut(s) 264
ScrFI CCNGG 2 cut(s) 276, 477
SduI GDGCHC 2 cut(s) 310, 735
SfaNI GCATC 2 cut(s) 389, 529
Sfr303I CCGCGG 1 cut(s) 76
SgrBI CCGCGG 1 cut(s) 76
SmiMI CAYNNNNRTG 1 cut(s) 385
SmlI CTYRAG 2 cut(s) 290, 752
SmoI CTYRAG 2 cut(s) 290, 752
Sse9I AATT 2 cut(s) 78, 573
SseBI AGGCCT 1 cut(s) 454
SsiI CCGC 2 cut(s) 73, 75
SspI AATATT 1 cut(s) 595
SspMI CTAG 3 cut(s) 260, 450, 827
StuI AGGCCT 1 cut(s) 454
StyD4I CCNGG 2 cut(s) 274, 475
StyI CCWWGG 2 cut(s) 33, 182
TaaI ACNGT 3 cut(s) 581, 775, 874
TaqI TCGA 3 cut(s) 118, 228, 418
TasI AATT 2 cut(s) 78, 573
TatI WGTACW 2 cut(s) 262, 286
TauI GCSGC 1 cut(s) 75
TfiI GAWTC 2 cut(s) 440, 547
Tru1I TTAA 5 cut(s) 291, 432, 576, 753, 897
Tru9I TTAA 5 cut(s) 291, 432, 576, 753, 897
TscAI CASTG 4 cut(s) 90, 137, 549, 724
TseI GCWGC 5 cut(s) 17, 208, 377, 923, 926
TspDTI ATGAA 3 cut(s) 40, 381, 933
TspRI CASTG 4 cut(s) 90, 137, 549, 724
Vha464I CTTAAG 2 cut(s) 290, 752
VneI GTGCAC 1 cut(s) 306
XapI RAATTY 1 cut(s) 78
XceI RCATGY 2 cut(s) 505, 517
XmiI GTMKAC 1 cut(s) 418
XspI CTAG 3 cut(s) 260, 450, 827
ZrmI AGTACT 1 cut(s) 264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.