RchiOBHm_Chr5g0021301

MOSC domain

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
15546330 .. 15547539
1210 bp
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UTR
Exon/CDS
Intron
PRQ30136

Sequence Viewer

Length: 348 bp
ATGGAGAAGCTACCATCACAAGAAGCCACAGCCAAAGTCTCATCAATCTTCATATATCCAGTTAAATCATGTCGTGGGATTTCGGTCTCTGAAGCACCTATCACTCCTACTGCATATACTCAAAGAGTTGAACCAAAGCTCGCTTGTGTTGAGGTACAGCTACCAAACGAGGCATTCCTAGAGGGTTGGGAACATACTAGCAGCTCTTTTCTGGTATTAAAAGCACCTGGCATGGATGTACTGAAGATTTCTATGAGTCCACCACAAGAAATAGCAGATAGAGTTTCAATATGGGAATGGTCTGGTGCTGCCTTAGATGAGGGAGCTGATGCATCAAAATGGTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

115

Amino Acids

12.61

Weight (kDa)

4.8

Isoelectric Point (pI)

40.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MOSC_N PF03476 11 - 36 7.3e-06 MOSC N-terminal beta barrel domain
MOSC_N PF03476 38 - 115 1.7e-09 MOSC N-terminal beta barrel domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 2 cut(s) 111, 263
AfaI GTAC 2 cut(s) 156, 240
AgsI TTSAA 2 cut(s) 131, 288
AjnI CCWGG 1 cut(s) 226
AluBI AGCT 5 cut(s) 10, 139, 160, 204, 326
AluI AGCT 5 cut(s) 10, 139, 160, 204, 326
Alw26I GTCTC 2 cut(s) 43, 91
ApeKI GCWGC 2 cut(s) 201, 308
BbvI GCAGC 2 cut(s) 213, 295
BccI CCATC 1 cut(s) 22
BciT130I CCWGG 1 cut(s) 228
BcoDI GTCTC 2 cut(s) 43, 91
BfaI CTAG 2 cut(s) 179, 198
BisI GCNGC 2 cut(s) 202, 309
BlsI GCNGC 2 cut(s) 203, 310
Bme1390I CCNGG 1 cut(s) 228
BmrFI CCNGG 1 cut(s) 228
BmsI GCATC 2 cut(s) 319, 341
BsaI GGTCTC 1 cut(s) 91
Bse1I ACTGG 1 cut(s) 59
BseBI CCWGG 1 cut(s) 228
BseGI GGATG 1 cut(s) 241
BseNI ACTGG 1 cut(s) 59
BseXI GCAGC 2 cut(s) 213, 295
BsmAI GTCTC 2 cut(s) 43, 91
BsmI GAATGC 1 cut(s) 173
Bso31I GGTCTC 1 cut(s) 91
BspTNI GGTCTC 1 cut(s) 91
BsrI ACTGG 1 cut(s) 59
Bst2UI CCWGG 1 cut(s) 228
BstC8I GCNNGC 1 cut(s) 141
BstDEI CTNAG 1 cut(s) 313
BstF5I GGATG 1 cut(s) 241
BstMAI GTCTC 2 cut(s) 43, 91
BstNI CCWGG 1 cut(s) 228
BstSCI CCNGG 1 cut(s) 226
BstV1I GCAGC 2 cut(s) 213, 295
BtsCI GGATG 1 cut(s) 241
Cac8I GCNNGC 1 cut(s) 141
Csp6I GTAC 2 cut(s) 155, 239
CviAII CATG 2 cut(s) 69, 232
CviJI RGCY 7 cut(s) 10, 26, 32, 139, 160, 204, 326
CviKI_1 RGCY 7 cut(s) 10, 26, 32, 139, 160, 204, 326
CviQI GTAC 2 cut(s) 155, 239
DdeI CTNAG 1 cut(s) 313
Eco31I GGTCTC 1 cut(s) 91
Eco57I CTGAAG 2 cut(s) 111, 263
EcoRII CCWGG 1 cut(s) 226
EcoT22I ATGCAT 1 cut(s) 334
FaeI CATG 2 cut(s) 72, 235
FaiI YATR 9 cut(s) 53, 55, 70, 115, 117, 195, 233, 254, 292
FatI CATG 2 cut(s) 68, 231
Fnu4HI GCNGC 2 cut(s) 202, 309
FokI GGATG 1 cut(s) 248
Fsp4HI GCNGC 2 cut(s) 202, 309
FspBI CTAG 2 cut(s) 179, 198
GluI GCNGC 2 cut(s) 202, 309
Hin1II CATG 2 cut(s) 72, 235
HinfI GANTC 1 cut(s) 256
Hpy166II GTNNAC 1 cut(s) 260
Hpy188I TCNGA 1 cut(s) 91
Hpy8I GTNNAC 1 cut(s) 260
HpyCH4V TGCA 2 cut(s) 113, 332
HpyF3I CTNAG 1 cut(s) 313
Hsp92II CATG 2 cut(s) 72, 235
LmnI GCTCC 1 cut(s) 323
LpnPI CCDG 5 cut(s) 72, 197, 213, 240, 288
Lsp1109I GCAGC 2 cut(s) 213, 295
LweI GCATC 2 cut(s) 319, 341
MaeI CTAG 2 cut(s) 179, 198
MboII GAAGA 2 cut(s) 40, 256
MlyI GAGTC 1 cut(s) 265
MnlI CCTC 4 cut(s) 145, 163, 175, 313
Mph1103I ATGCAT 1 cut(s) 334
MseI TTAA 2 cut(s) 63, 218
MslI CAYNNNNRTG 1 cut(s) 337
MspR9I CCNGG 1 cut(s) 228
Mva1269I GAATGC 1 cut(s) 173
MvaI CCWGG 1 cut(s) 228
NlaIII CATG 2 cut(s) 72, 235
NsiI ATGCAT 1 cut(s) 334
PctI GAATGC 1 cut(s) 173
PkrI GCNGC 2 cut(s) 203, 310
PleI GAGTC 1 cut(s) 264
PpsI GAGTC 1 cut(s) 264
Psp6I CCWGG 1 cut(s) 226
PspGI CCWGG 1 cut(s) 226
RsaI GTAC 2 cut(s) 156, 240
RsaNI GTAC 2 cut(s) 155, 239
RseI CAYNNNNRTG 1 cut(s) 337
SaqAI TTAA 2 cut(s) 63, 218
SatI GCNGC 2 cut(s) 202, 309
SchI GAGTC 1 cut(s) 265
ScrFI CCNGG 1 cut(s) 228
SetI ASST 8 cut(s) 12, 100, 141, 156, 162, 206, 229, 328
SfaNI GCATC 2 cut(s) 319, 341
SmiMI CAYNNNNRTG 1 cut(s) 337
SspMI CTAG 2 cut(s) 179, 198
StyD4I CCNGG 1 cut(s) 226
TaqII GACCGA 1 cut(s) 73
TatI WGTACW 1 cut(s) 238
Tru1I TTAA 2 cut(s) 63, 218
Tru9I TTAA 2 cut(s) 63, 218
TseI GCWGC 2 cut(s) 201, 308
TspDTI ATGAA 1 cut(s) 40
XspI CTAG 2 cut(s) 179, 198
Zsp2I ATGCAT 1 cut(s) 334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.