pycom10g22810

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
25117475 .. 25121071
3597 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g22810.1

Sequence Viewer

Length: 396 bp
ATGGCAAGATTTCTCATCATGCTCACGTTGATCCTTTGCTTCTCCTCATCATCAACAGTCAAAATTGAAGCACAGTCTCAATCTGATCCTAAAGAAGTGGAAACACTAAAGGAAATAGCTAAACAAATTGGGAAAAAAGACTGGAACTTCAGCATAGACCCATGCATCAATGACACAAATTGGGCTACACCAAAATCTGCTGACTTGCCTCGCTACAACAACACTGTCATCTGCAACTGCTCCACGCCTGATGGTTTTTGCCATGTTGTCAGCATGTATGCTAACTTTTTTCTTTTGAACAGAAGCCATAGTGCTAATTCATTGAAAAAAATATTACAACATAATTACAAGGGTGCCATAACCAGGTATAACTTTATCAATTACCCAAATCTTTAA

Protein Analysis

132

Amino Acids

14.91

Weight (kDa)

8.84

Isoelectric Point (pI)

33.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 353
AclWI GGATC 2 cut(s) 25, 80
AcuI CTGAAG 1 cut(s) 133
AfiI CCNNNNNNNGG 1 cut(s) 363
AgsI TTSAA 3 cut(s) 68, 298, 325
AjnI CCWGG 1 cut(s) 362
AluBI AGCT 1 cut(s) 119
AluI AGCT 1 cut(s) 119
Alw26I GTCTC 1 cut(s) 81
AlwI GGATC 2 cut(s) 25, 80
BanI GGYRCC 1 cut(s) 353
BccI CCATC 1 cut(s) 245
BciT130I CCWGG 1 cut(s) 364
BcoDI GTCTC 1 cut(s) 81
Bme1390I CCNGG 1 cut(s) 364
BmiI GGNNCC 1 cut(s) 355
BmrFI CCNGG 1 cut(s) 364
BmsI GCATC 1 cut(s) 174
Bsc4I CCNNNNNNNGG 1 cut(s) 363
Bse1I ACTGG 1 cut(s) 146
BseBI CCWGG 1 cut(s) 364
BseLI CCNNNNNNNGG 1 cut(s) 363
BseNI ACTGG 1 cut(s) 146
BseRI GAGGAG 1 cut(s) 34
BshNI GGYRCC 1 cut(s) 353
BslI CCNNNNNNNGG 1 cut(s) 363
BsmAI GTCTC 1 cut(s) 81
Bsp143I GATC 2 cut(s) 30, 85
BspLI GGNNCC 1 cut(s) 355
BspPI GGATC 2 cut(s) 25, 80
BspT107I GGYRCC 1 cut(s) 353
BsrI ACTGG 1 cut(s) 146
BssMI GATC 2 cut(s) 30, 85
Bst2UI CCWGG 1 cut(s) 364
Bst4CI ACNGT 3 cut(s) 58, 75, 226
BstKTI GATC 2 cut(s) 33, 88
BstMAI GTCTC 1 cut(s) 81
BstMBI GATC 2 cut(s) 30, 85
BstNI CCWGG 1 cut(s) 364
BstNSI RCATGY 1 cut(s) 277
BstSCI CCNGG 1 cut(s) 362
BtsIMutI CAGTG 1 cut(s) 222
CsiI ACCWGGT 1 cut(s) 362
CviAII CATG 4 cut(s) 19, 162, 263, 274
CviJI RGCY 3 cut(s) 119, 185, 306
CviKI_1 RGCY 3 cut(s) 119, 185, 306
DpnI GATC 2 cut(s) 32, 87
DpnII GATC 2 cut(s) 30, 85
Eco57I CTGAAG 1 cut(s) 133
EcoRII CCWGG 1 cut(s) 362
EcoT22I ATGCAT 1 cut(s) 167
FaeI CATG 4 cut(s) 22, 165, 266, 277
FatI CATG 4 cut(s) 18, 161, 262, 273
Hin1II CATG 4 cut(s) 22, 165, 266, 277
Hpy188I TCNGA 1 cut(s) 85
HpyCH4III ACNGT 3 cut(s) 58, 75, 226
HpyCH4IV ACGT 1 cut(s) 26
HpyCH4V TGCA 2 cut(s) 165, 234
HpySE526I ACGT 1 cut(s) 26
Hsp92II CATG 4 cut(s) 22, 165, 266, 277
Kzo9I GATC 2 cut(s) 30, 85
LmnI GCTCC 1 cut(s) 245
LpnPI CCDG 4 cut(s) 127, 261, 349, 376
LweI GCATC 1 cut(s) 174
MabI ACCWGGT 1 cut(s) 362
MaeII ACGT 1 cut(s) 26
MalI GATC 2 cut(s) 32, 87
MboI GATC 2 cut(s) 30, 85
MluCI AATT 6 cut(s) 63, 126, 178, 316, 343, 379
MnlI CCTC 2 cut(s) 55, 219
Mph1103I ATGCAT 1 cut(s) 167
MseI TTAA 1 cut(s) 394
MspR9I CCNGG 1 cut(s) 364
MvaI CCWGG 1 cut(s) 364
NdeII GATC 2 cut(s) 30, 85
NlaIII CATG 4 cut(s) 22, 165, 266, 277
NlaIV GGNNCC 1 cut(s) 355
NsiI ATGCAT 1 cut(s) 167
NspI RCATGY 1 cut(s) 277
Psp6I CCWGG 1 cut(s) 362
PspGI CCWGG 1 cut(s) 362
PspN4I GGNNCC 1 cut(s) 355
SaqAI TTAA 1 cut(s) 394
Sau3AI GATC 2 cut(s) 30, 85
ScrFI CCNGG 1 cut(s) 364
SetI ASST 3 cut(s) 29, 121, 368
SexAI ACCWGGT 1 cut(s) 362
SfaNI GCATC 1 cut(s) 174
Sse9I AATT 6 cut(s) 63, 126, 178, 316, 343, 379
SspI AATATT 1 cut(s) 333
StyD4I CCNGG 1 cut(s) 362
TaaI ACNGT 3 cut(s) 58, 75, 226
TaiI ACGT 1 cut(s) 29
TasI AATT 6 cut(s) 63, 126, 178, 316, 343, 379
Tru1I TTAA 1 cut(s) 394
Tru9I TTAA 1 cut(s) 394
TscAI CASTG 1 cut(s) 229
TspDTI ATGAA 1 cut(s) 309
TspRI CASTG 1 cut(s) 229
XceI RCATGY 1 cut(s) 277
Zsp2I ATGCAT 1 cut(s) 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.