Rh7AG386900

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
50752761 .. 50753171
411 bp
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UTR
Exon/CDS
Intron
Rh7AG386900.1

Sequence Viewer

Length: 321 bp
ATGGAAAGAATTTATAGGAACAATCCAGTGGAGACGGTCATCTTCTTCATAGTGGTCATGTCCATGGCACAAGTTACATTTGAAGCACAGACCATGACTCTTCCAGCTGATGAGGTGCAAGCCCTTCATGAAGTTGCTGAGCAACTGAACAAAAAGGATTGGAATTTCAGCGACCCATGTAGAAATATTCCAACTTTCTCAATCCCACATACGGATCAGTACAACAACACCCTCTTCTGCAACTGTTCTTTCCCTGGGAATGTGTGCCATGTCCAAACCATGTATGTGGGCCCGAATTCTCTACTCAATTTGCATTTGTAA

Protein Analysis

106

Amino Acids

12.18

Weight (kDa)

5.09

Isoelectric Point (pI)

29.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 222
AcsI RAATTY 3 cut(s) 9, 163, 295
AfaI GTAC 1 cut(s) 221
AfiI CCNNNNNNNGG 1 cut(s) 211
AgsI TTSAA 1 cut(s) 83
AjnI CCWGG 1 cut(s) 253
AluBI AGCT 1 cut(s) 107
AluI AGCT 1 cut(s) 107
Alw26I GTCTC 1 cut(s) 26
AlwI GGATC 1 cut(s) 222
AoxI GGCC 1 cut(s) 289
ApaI GGGCCC 1 cut(s) 293
ApoI RAATTY 3 cut(s) 9, 163, 295
AspS9I GGNCC 2 cut(s) 289, 290
BaeGI GKGCMC 1 cut(s) 293
BanII GRGCYC 1 cut(s) 293
BciT130I CCWGG 1 cut(s) 255
BcoDI GTCTC 1 cut(s) 26
BlpI GCTNAGC 1 cut(s) 138
Bme1390I CCNGG 1 cut(s) 255
BmgT120I GGNCC 2 cut(s) 289, 290
BmiI GGNNCC 1 cut(s) 291
BmrFI CCNGG 1 cut(s) 255
Bpu1102I GCTNAGC 1 cut(s) 138
BsaJI CCNNGG 3 cut(s) 63, 253, 254
Bsc4I CCNNNNNNNGG 1 cut(s) 211
Bse1I ACTGG 1 cut(s) 26
BseBI CCWGG 1 cut(s) 255
BseDI CCNNGG 3 cut(s) 63, 253, 254
BseLI CCNNNNNNNGG 1 cut(s) 211
BseMII CTCAG 1 cut(s) 129
BseNI ACTGG 1 cut(s) 26
BseSI GKGCMC 1 cut(s) 293
BshFI GGCC 1 cut(s) 291
BslI CCNNNNNNNGG 1 cut(s) 211
BsmAI GTCTC 1 cut(s) 26
BsmBI CGTCTC 1 cut(s) 26
BsnI GGCC 1 cut(s) 291
Bsp120I GGGCCC 1 cut(s) 289
Bsp1286I GDGCHC 1 cut(s) 293
Bsp143I GATC 1 cut(s) 214
Bsp1720I GCTNAGC 1 cut(s) 138
Bsp19I CCATGG 1 cut(s) 63
BspANI GGCC 1 cut(s) 291
BspCNI CTCAG 1 cut(s) 130
BspHI TCATGA 1 cut(s) 127
BspLI GGNNCC 1 cut(s) 291
BspPI GGATC 1 cut(s) 222
BsrI ACTGG 1 cut(s) 26
BssECI CCNNGG 3 cut(s) 63, 253, 254
BssMI GATC 1 cut(s) 214
BssT1I CCWWGG 1 cut(s) 63
Bst2UI CCWGG 1 cut(s) 255
Bst4CI ACNGT 2 cut(s) 37, 245
Bst6I CTCTTC 2 cut(s) 105, 239
BstC8I GCNNGC 1 cut(s) 120
BstDEI CTNAG 1 cut(s) 138
BstDSI CCRYGG 1 cut(s) 63
BstKTI GATC 1 cut(s) 217
BstMAI GTCTC 1 cut(s) 26
BstMBI GATC 1 cut(s) 214
BstNI CCWGG 1 cut(s) 255
BstSCI CCNGG 1 cut(s) 253
BstSLI GKGCMC 1 cut(s) 293
BstXI CCANNNNNNTGG 1 cut(s) 286
BsuRI GGCC 1 cut(s) 291
BtgI CCRYGG 1 cut(s) 63
BtsIMutI CAGTG 1 cut(s) 33
Cac8I GCNNGC 1 cut(s) 120
CciI TCATGA 1 cut(s) 127
Cfr13I GGNCC 2 cut(s) 289, 290
Csp6I GTAC 1 cut(s) 220
CviAII CATG 7 cut(s) 58, 64, 94, 128, 177, 269, 280
CviJI RGCY 3 cut(s) 107, 122, 291
CviKI_1 RGCY 3 cut(s) 107, 122, 291
CviQI GTAC 1 cut(s) 220
DdeI CTNAG 1 cut(s) 138
DpnI GATC 1 cut(s) 216
DpnII GATC 1 cut(s) 214
Eam1104I CTCTTC 2 cut(s) 105, 239
EarI CTCTTC 2 cut(s) 105, 239
Eco130I CCWWGG 1 cut(s) 63
Eco24I GRGCYC 1 cut(s) 293
EcoRI GAATTC 1 cut(s) 295
EcoRII CCWGG 1 cut(s) 253
EcoT14I CCWWGG 1 cut(s) 63
EcoT38I GRGCYC 1 cut(s) 293
ErhI CCWWGG 1 cut(s) 63
Esp3I CGTCTC 1 cut(s) 26
FaeI CATG 7 cut(s) 61, 67, 97, 131, 180, 272, 283
FatI CATG 7 cut(s) 57, 63, 93, 127, 176, 268, 279
FriOI GRGCYC 1 cut(s) 293
HaeIII GGCC 1 cut(s) 291
Hin1II CATG 7 cut(s) 61, 67, 97, 131, 180, 272, 283
HinfI GANTC 1 cut(s) 97
Hpy188III TCNNGA 1 cut(s) 128
HpyAV CCTTC 1 cut(s) 134
HpyCH4III ACNGT 2 cut(s) 37, 245
HpyCH4V TGCA 3 cut(s) 118, 240, 313
HpyF3I CTNAG 1 cut(s) 138
Hsp92II CATG 7 cut(s) 61, 67, 97, 131, 180, 272, 283
Kzo9I GATC 1 cut(s) 214
LpnPI CCDG 4 cut(s) 39, 117, 240, 267
MaeIII GTNAC 1 cut(s) 73
MalI GATC 1 cut(s) 216
MboI GATC 1 cut(s) 214
MboII GAAGA 4 cut(s) 34, 37, 92, 226
MhlI GDGCHC 1 cut(s) 293
MluCI AATT 4 cut(s) 9, 163, 295, 307
MlyI GAGTC 1 cut(s) 91
MmeI TCCRAC 1 cut(s) 215
MnlI CCTC 2 cut(s) 106, 242
MslI CAYNNNNRTG 2 cut(s) 62, 284
MspA1I CMGCKG 1 cut(s) 107
MspR9I CCNGG 1 cut(s) 255
MvaI CCWGG 1 cut(s) 255
NcoI CCATGG 1 cut(s) 63
NdeII GATC 1 cut(s) 214
NlaIII CATG 7 cut(s) 61, 67, 97, 131, 180, 272, 283
NlaIV GGNNCC 1 cut(s) 291
PagI TCATGA 1 cut(s) 127
PasI CCCWGGG 1 cut(s) 254
PleI GAGTC 1 cut(s) 91
PpsI GAGTC 1 cut(s) 91
Psp6I CCWGG 1 cut(s) 253
PspGI CCWGG 1 cut(s) 253
PspN4I GGNNCC 1 cut(s) 291
PspOMI GGGCCC 1 cut(s) 289
PspPI GGNCC 2 cut(s) 289, 290
PvuII CAGCTG 1 cut(s) 107
RsaI GTAC 1 cut(s) 221
RsaNI GTAC 1 cut(s) 220
RseI CAYNNNNRTG 2 cut(s) 62, 284
Sau3AI GATC 1 cut(s) 214
Sau96I GGNCC 2 cut(s) 289, 290
SchI GAGTC 1 cut(s) 91
ScrFI CCNGG 1 cut(s) 255
SduI GDGCHC 1 cut(s) 293
SetI ASST 2 cut(s) 109, 117
SmiMI CAYNNNNRTG 2 cut(s) 62, 284
Sse9I AATT 4 cut(s) 9, 163, 295, 307
SspI AATATT 1 cut(s) 187
StyD4I CCNGG 1 cut(s) 253
StyI CCWWGG 1 cut(s) 63
TaaI ACNGT 2 cut(s) 37, 245
TasI AATT 4 cut(s) 9, 163, 295, 307
TatI WGTACW 1 cut(s) 219
TscAI CASTG 1 cut(s) 33
TspDTI ATGAA 3 cut(s) 37, 116, 144
TspGWI ACGGA 1 cut(s) 227
TspRI CASTG 1 cut(s) 33
XapI RAATTY 3 cut(s) 9, 163, 295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.