pycom15g04590

gag-polypeptide of LTR copia-type

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0001471
Physical Location & Seq
Forward (+)
2735924 .. 2738723
2800 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2115 bp
ATGGGATTTCTCACTACTTATTTTGATTCCTCCTTGCTTGTGAAGCATGTTGAGAATTCTGTGGTGATTCTCTTGTTGTATGTAGATGATATAATCATCACAGGCAATGATACTGCAGCTATTACAGATGTCATCCAGTCTTTAGCTCAAGAATTTGATATTAAAGATTTGGGGCCCTTACATTATTTTTTAGGGATTCAAATCACTCACAGTGCCACTGGTCTATTTCTATCACAATCCAAATATGTTACAGATTTGCTAAACAAGACTGAAATGGCTCTCTCCAAATCATGTCATACTTCCTGTCTACCTTATAATAGGTTACTTAAGGATGATGGCAAACCTTTTCATAATCCAGCATTGTATAGACGTGTGGTGGGTGCTTTTACAATAGGTATGTCAGTTTATGCACTGTCCCATGGAATCCCATTTTATAGTTGTGAAGAGAATTCTCATATATTTGAAAGGCACAATGGACTATGTGATGCTGACTGGGCTGGGGATCCGAATGATAGAAGGTCTACAACAGGTTTGGTGGTTTACTTGGGTTTTAATCCCATATCTTGGACCTCCAAGAAACAAAAAACAGTCTCCAAATCTTCAACTGAAGCTGAATATCAAGCTCGATCTTCCACAGTTGCAGAAGTTGACTGGATAAAGCAACTTTTGCAATTTCTCAGACTCTCAGTCATAGCTTTAGCTTACAATTCAGTTATGCACCAAAGGACAAAGCACATTGAAGTTGATATTCACTTTGTCCGAGAGAGGGTTGCCAAGAAGTTACTCCAAGTCTATTTTGTTTCCTCTAATGAACAATTTGCTGATATCCTTACCAAGGGTTTGTCTACTCTCAAGTTTCATATAGCAGCTATGAAACAAACCACACTTGAGCCACAATCCCGACCTCGCTTCGAACAAGAAGCGATGATCAAATCGAGGAGAAACCCTCGAATTTACCCTTCAAGCACGTCTCCCTCGTCATCTTCTTCCCCCACTCTCTCTGCTGCCACTACGGACCCTGAAATTTTCTCAGCTGCAGGAGCCTCTTCCTCTTTCCATATTGAAGCGGAGGATGCTCCTGCGGTGGCTGATGCTGTTGACTCTGCCGGGTTATCACAATCAATGGCAGAGATAAGATGGATTGGGGAGCAGCACCAGATGGAGTGGAACGACACCATGAACTTGGTCACGTCAGCATGGTGGTTTAAGTTTTTGAAGGTCGTGGAACTCGGTGGGGGCCCACAAGTGAAGGATGAGGACGATGACGATGGTTACCACCATCCGTATTTGATGAATCCCTTTTGGATTCAAAAACATAGAAATTTAGAATTTTCGCATGGAAAAAAACTTGGGATTTGGAACCTCCAATTCCCAAGTTTAAATTTCATAACAAATTCCGTATTCTATTCCATTCTCGTTATTTCAATTTCTGTCATTTTAAAATTCCTTAGTAATCTTAAATTTCTTCATCCAAACATATCATGGAATTTCCAGCCTGTGCTACTCAGACGACTATTTTCAAGATCCTGCCTTGCCTTGGTAAGAACCCAACAGATTTTTTGCAGACTCGGAAAGCTGTTTTTATCTTTTCATCTCCAATTCTTTTATTTTTTATTTTCTTCTGAATTGAAAACATTTGGATTTTTTTTATTTTTTATTTTTTTGGGATCGAAGCTGCTGTCATTTGTAGAGCTAGCCATTAAAATACGTGGGAGCCGAAGAGAAAGTGCTGTTGCCACAGGTTTTGTTGTCTCTCATCAGCTTCGCTTTTTTCATTTTTCTAGTCGGCTTGATCAATTGAGAGGCCTTCAATTTGAGCGGGAAATTGTCGAAAAATTTTCAAGTCATTTAGTACTATTGTCAAAAAGGTACAAAATTATCAAACTTGTGAACCTTAGCCCAATGGAATTTTTGTTTAAGTCTACATGCCCATGTCAGCTAGTCATAGGCTTTTTCTGGCTATTTATTATCACCATCATAACTATGATGTATGTTCACCATACATCATACACCTCATTAGCTAACGTGTCTTTCCAACTAACTTTGATTAACTTTAATATTAAATGTTCATTTTCCAATTTGAAAAAAAAAAAAAACTATGGCCAAGTGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_2

Protein Analysis

705

Amino Acids

80.44

Weight (kDa)

9.15

Isoelectric Point (pI)

46.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_2 PF07727 9 - 101 4.4e-18 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 315
AccB7I CCANNNNNTGG 1 cut(s) 564
AccBSI CCGCTC 1 cut(s) 1819
AccI GTMKAC 4 cut(s) 307, 521, 845, 1922
AciI CCGC 3 cut(s) 1067, 1082, 1819
AclWI GGATC 4 cut(s) 497, 510, 1518, 1675
AcoI YGGCCR 1 cut(s) 2101
AcuI CTGAAG 1 cut(s) 627
AfaI GTAC 2 cut(s) 1854, 1871
AfiI CCNNNNNNNGG 4 cut(s) 564, 766, 835, 1537
AflII CTTAAG 1 cut(s) 326
AflIII ACRYGT 2 cut(s) 370, 2025
AhdI GACNNNNNGTC 1 cut(s) 686
AjiI CACGTC 3 cut(s) 371, 969, 1191
Alw26I GTCTC 3 cut(s) 595, 975, 1756
AlwI GGATC 4 cut(s) 497, 510, 1518, 1675
AoxI GGCC 4 cut(s) 173, 1237, 1804, 2101
ApaI GGGCCC 2 cut(s) 177, 1241
ApeKI GCWGC 6 cut(s) 116, 866, 1004, 1034, 1150, 1675
ArsI GACNNNNNNTTYG 2 cut(s) 1664, 1696
AspS9I GGNCC 6 cut(s) 173, 174, 567, 1015, 1237, 1238
AsuC2I CCSGG 1 cut(s) 1108
AsuHPI GGTGA 3 cut(s) 76, 1963, 1988
AsuII TTCGAA 1 cut(s) 912
AsuNHI GCTAGC 1 cut(s) 1693
AvaII GGWCC 2 cut(s) 567, 1015
BaeGI GKGCMC 2 cut(s) 177, 1241
BalI TGGCCA 1 cut(s) 2103
BamHI GGATCC 1 cut(s) 502
BanII GRGCYC 2 cut(s) 177, 1241
BbvI GCAGC 6 cut(s) 128, 878, 991, 1021, 1162, 1662
BccI CCATC 6 cut(s) 329, 1131, 1153, 1262, 1287, 1982
BclI TGATCA 2 cut(s) 927, 1792
BcnI CCSGG 1 cut(s) 1108
BcoDI GTCTC 3 cut(s) 595, 975, 1756
BfaI CTAG 3 cut(s) 1694, 1782, 1940
BfmI CTRYAG 2 cut(s) 114, 1035
BfrI CTTAAG 1 cut(s) 326
BisI GCNGC 6 cut(s) 117, 867, 1005, 1035, 1151, 1676
BlsI GCNGC 6 cut(s) 118, 868, 1006, 1036, 1152, 1677
BmcAI AGTACT 1 cut(s) 1854
Bme1390I CCNGG 1 cut(s) 1108
Bme18I GGWCC 2 cut(s) 567, 1015
BmeRI GACNNNNNGTC 1 cut(s) 686
BmgBI CACGTC 3 cut(s) 371, 969, 1191
BmgT120I GGNCC 6 cut(s) 173, 174, 567, 1015, 1237, 1238
BmiI GGNNCC 9 cut(s) 174, 175, 504, 1017, 1042, 1238, 1239, 1361, 1715
BmrFI CCNGG 1 cut(s) 1108
BmrI ACTGGG 1 cut(s) 502
BmsI GCATC 3 cut(s) 475, 1063, 1081
BmtI GCTAGC 1 cut(s) 1697
BmuI ACTGGG 1 cut(s) 502
BplI GAGNNNNNCTC 2 cut(s) 931, 963
Bpu10I CCTNAGC 1 cut(s) 1895
Bpu14I TTCGAA 1 cut(s) 912
BpuEI CTTGAG 3 cut(s) 132, 836, 908
BpuMI CCSGG 1 cut(s) 1108
BsaAI YACGTR 1 cut(s) 1709
BsaBI GATNNNNATC 1 cut(s) 200
BsaJI CCNNGG 3 cut(s) 418, 834, 1536
Bsc4I CCNNNNNNNGG 4 cut(s) 564, 766, 835, 1537
Bse1I ACTGG 4 cut(s) 136, 223, 497, 656
Bse3DI GCAATG 1 cut(s) 112
Bse8I GATNNNNATC 1 cut(s) 200
BseDI CCNNGG 3 cut(s) 418, 834, 1536
BseGI GGATG 6 cut(s) 132, 337, 1078, 1258, 1279, 1468
BseJI GATNNNNATC 1 cut(s) 200
BseLI CCNNNNNNNGG 4 cut(s) 564, 766, 835, 1537
BseMI GCAATG 1 cut(s) 112
BseMII CTCAG 4 cut(s) 691, 699, 1044, 1519
BseNI ACTGG 4 cut(s) 136, 223, 497, 656
BseRI GAGGAG 1 cut(s) 952
BseSI GKGCMC 2 cut(s) 177, 1241
BseXI GCAGC 6 cut(s) 128, 878, 991, 1021, 1162, 1662
BseYI CCCAGC 1 cut(s) 497
BshFI GGCC 4 cut(s) 175, 1239, 1806, 2103
BsiSI CCGG 1 cut(s) 1107
BslFI GGGAC 1 cut(s) 400
BslI CCNNNNNNNGG 4 cut(s) 564, 766, 835, 1537
BsmAI GTCTC 3 cut(s) 595, 975, 1756
BsmBI CGTCTC 1 cut(s) 975
BsmFI GGGAC 1 cut(s) 400
BsnI GGCC 4 cut(s) 175, 1239, 1806, 2103
Bsp119I TTCGAA 1 cut(s) 912
Bsp120I GGGCCC 2 cut(s) 173, 1237
Bsp1286I GDGCHC 2 cut(s) 177, 1241
Bsp143I GATC 6 cut(s) 502, 626, 927, 1523, 1667, 1792
Bsp19I CCATGG 1 cut(s) 418
BspACI CCGC 3 cut(s) 1067, 1082, 1819
BspANI GGCC 4 cut(s) 175, 1239, 1806, 2103
BspCNI CTCAG 4 cut(s) 690, 698, 1043, 1518
BspLI GGNNCC 9 cut(s) 174, 175, 504, 1017, 1042, 1238, 1239, 1361, 1715
BspMAI CTGCAG 2 cut(s) 118, 1039
BspOI GCTAGC 1 cut(s) 1697
BspPI GGATC 4 cut(s) 497, 510, 1518, 1675
BspT104I TTCGAA 1 cut(s) 912
BspTI CTTAAG 1 cut(s) 326
BsrBI CCGCTC 1 cut(s) 1819
BsrDI GCAATG 1 cut(s) 112
BsrI ACTGG 4 cut(s) 136, 223, 497, 656
BssECI CCNNGG 3 cut(s) 418, 834, 1536
BssMI GATC 6 cut(s) 502, 626, 927, 1523, 1667, 1792
BssT1I CCWWGG 3 cut(s) 418, 834, 1536
Bst4CI ACNGT 4 cut(s) 212, 414, 589, 637
Bst6I CTCTTC 3 cut(s) 438, 1051, 1714
BstAFI CTTAAG 1 cut(s) 326
BstAPI GCANNNNNTGC 1 cut(s) 667
BstBAI YACGTR 1 cut(s) 1709
BstBI TTCGAA 1 cut(s) 912
BstC8I GCNNGC 1 cut(s) 1695
BstDEI CTNAG 6 cut(s) 677, 685, 1030, 1448, 1505, 1895
BstDSI CCRYGG 1 cut(s) 418
BstEII GGTNACC 1 cut(s) 1271
BstENI CCTNNNNNAGG 1 cut(s) 833
BstF5I GGATG 6 cut(s) 132, 337, 1078, 1258, 1279, 1468
BstKTI GATC 6 cut(s) 505, 629, 930, 1526, 1670, 1795
BstMAI GTCTC 3 cut(s) 595, 975, 1756
BstMBI GATC 6 cut(s) 502, 626, 927, 1523, 1667, 1792
BstMWI GCNNNNNNNGC 5 cut(s) 43, 494, 667, 1040, 1073
BstNSI RCATGY 2 cut(s) 50, 1929
BstPI GGTNACC 1 cut(s) 1271
BstSCI CCNGG 1 cut(s) 1106
BstSFI CTRYAG 2 cut(s) 114, 1035
BstSLI GKGCMC 2 cut(s) 177, 1241
BstV1I GCAGC 6 cut(s) 128, 878, 991, 1021, 1162, 1662
BstX2I RGATCY 2 cut(s) 502, 1523
BstXI CCANNNNNNTGG 1 cut(s) 1183
BstYI RGATCY 2 cut(s) 502, 1523
BsuRI GGCC 4 cut(s) 175, 1239, 1806, 2103
BtgI CCRYGG 1 cut(s) 418
BtgZI GCGATG 1 cut(s) 938
BtrI CACGTC 3 cut(s) 371, 969, 1191
BtsCI GGATG 6 cut(s) 132, 337, 1078, 1258, 1279, 1468
BtsIMutI CAGTG 3 cut(s) 216, 217, 410
Cac8I GCNNGC 1 cut(s) 1695
Cfr13I GGNCC 6 cut(s) 173, 174, 567, 1015, 1237, 1238
Csp6I GTAC 2 cut(s) 1853, 1870
CspCI CAANNNNNGTGG 2 cut(s) 1726, 1761
CviAII CATG 9 cut(s) 47, 291, 419, 1177, 1197, 1337, 1482, 1926, 1932
CviQI GTAC 2 cut(s) 1853, 1870
DdeI CTNAG 6 cut(s) 677, 685, 1030, 1448, 1505, 1895
DpnI GATC 6 cut(s) 504, 628, 929, 1525, 1669, 1794
DpnII GATC 6 cut(s) 502, 626, 927, 1523, 1667, 1792
DraI TTTAAA 2 cut(s) 1380, 1440
DriI GACNNNNNGTC 1 cut(s) 686
EaeI YGGCCR 1 cut(s) 2101
Eam1104I CTCTTC 3 cut(s) 438, 1051, 1714
Eam1105I GACNNNNNGTC 1 cut(s) 686
EarI CTCTTC 3 cut(s) 438, 1051, 1714
Eco130I CCWWGG 3 cut(s) 418, 834, 1536
Eco147I AGGCCT 1 cut(s) 1806
Eco24I GRGCYC 2 cut(s) 177, 1241
Eco32I GATATC 1 cut(s) 826
Eco47I GGWCC 2 cut(s) 567, 1015
Eco57I CTGAAG 1 cut(s) 627
Eco91I GGTNACC 1 cut(s) 1271
EcoNI CCTNNNNNAGG 1 cut(s) 833
EcoO109I RGGNCCY 3 cut(s) 173, 174, 1237
EcoO65I GGTNACC 1 cut(s) 1271
EcoRI GAATTC 2 cut(s) 55, 448
EcoRV GATATC 1 cut(s) 826
EcoT14I CCWWGG 3 cut(s) 418, 834, 1536
EcoT38I GRGCYC 2 cut(s) 177, 1241
ErhI CCWWGG 3 cut(s) 418, 834, 1536
Esp3I CGTCTC 1 cut(s) 975
FaeI CATG 9 cut(s) 50, 294, 422, 1180, 1200, 1340, 1485, 1929, 1935
FaqI GGGAC 1 cut(s) 400
FatI CATG 9 cut(s) 46, 290, 418, 1176, 1196, 1336, 1481, 1925, 1931
FauI CCCGC 1 cut(s) 1812
FbaI TGATCA 2 cut(s) 927, 1792
FblI GTMKAC 4 cut(s) 307, 521, 845, 1922
Fnu4HI GCNGC 6 cut(s) 117, 867, 1005, 1035, 1151, 1676
FokI GGATG 6 cut(s) 119, 344, 1085, 1265, 1266, 1455
FriOI GRGCYC 2 cut(s) 177, 1241
Fsp4HI GCNGC 6 cut(s) 117, 867, 1005, 1035, 1151, 1676
FspBI CTAG 3 cut(s) 1694, 1782, 1940
GluI GCNGC 6 cut(s) 117, 867, 1005, 1035, 1151, 1676
GsaI CCCAGC 1 cut(s) 501
HaeIII GGCC 4 cut(s) 175, 1239, 1806, 2103
HapII CCGG 1 cut(s) 1107
Hin1II CATG 9 cut(s) 50, 294, 422, 1180, 1200, 1340, 1485, 1929, 1935
HincII GTYRAC 2 cut(s) 649, 1099
HindII GTYRAC 2 cut(s) 649, 1099
HinfI GANTC 9 cut(s) 26, 67, 196, 423, 681, 1100, 1294, 1306, 1566
HpaII CCGG 1 cut(s) 1107
HphI GGTGA 3 cut(s) 76, 1963, 1988
Hpy166II GTNNAC 9 cut(s) 308, 522, 541, 649, 846, 1099, 1891, 1923, 1996
Hpy188I TCNGA 6 cut(s) 507, 680, 761, 1508, 1571, 1624
Hpy188III TCNNGA 3 cut(s) 149, 900, 1521
Hpy8I GTNNAC 9 cut(s) 308, 522, 541, 649, 846, 1099, 1891, 1923, 1996
HpyAV CCTTC 5 cut(s) 510, 969, 1210, 1243, 1817
HpyCH4III ACNGT 4 cut(s) 212, 414, 589, 637
HpyCH4IV ACGT 5 cut(s) 370, 968, 1190, 1708, 2025
HpyCH4V TGCA 7 cut(s) 116, 410, 641, 670, 718, 1037, 1563
HpyF10VI GCNNNNNNNGC 5 cut(s) 43, 494, 667, 1040, 1073
HpyF3I CTNAG 6 cut(s) 677, 685, 1030, 1448, 1505, 1895
HpySE526I ACGT 5 cut(s) 370, 968, 1190, 1708, 2025
Hsp92II CATG 9 cut(s) 50, 294, 422, 1180, 1200, 1340, 1485, 1929, 1935
Ksp22I TGATCA 2 cut(s) 927, 1792
Kzo9I GATC 6 cut(s) 502, 626, 927, 1523, 1667, 1792
LmnI GCTCC 4 cut(s) 1040, 1081, 1147, 1713
Lsp1109I GCAGC 6 cut(s) 128, 878, 991, 1021, 1162, 1662
LweI GCATC 3 cut(s) 475, 1063, 1081
MaeI CTAG 3 cut(s) 1694, 1782, 1940
MaeII ACGT 5 cut(s) 370, 968, 1190, 1708, 2025
MaeIII GTNAC 5 cut(s) 247, 321, 780, 1186, 1271
MalI GATC 6 cut(s) 504, 628, 929, 1525, 1669, 1794
MbiI CCGCTC 1 cut(s) 1819
MboI GATC 6 cut(s) 502, 626, 927, 1523, 1667, 1792
MboII GAAGA 9 cut(s) 455, 591, 621, 975, 978, 1038, 1457, 1611, 1731
MfeI CAATTG 1 cut(s) 1796
MflI RGATCY 2 cut(s) 502, 1523
MhlI GDGCHC 2 cut(s) 177, 1241
MlsI TGGCCA 1 cut(s) 2103
MluNI TGGCCA 1 cut(s) 2103
MlyI GAGTC 3 cut(s) 675, 1094, 1560
MmeI TCCRAC 1 cut(s) 2059
Mox20I TGGCCA 1 cut(s) 2103
MscI TGGCCA 1 cut(s) 2103
MslI CAYNNNNRTG 2 cut(s) 1930, 1982
Msp20I TGGCCA 1 cut(s) 2103
MspA1I CMGCKG 1 cut(s) 1034
MspCI CTTAAG 1 cut(s) 326
MspI CCGG 1 cut(s) 1107
MspR9I CCNGG 1 cut(s) 1108
MunI CAATTG 1 cut(s) 1796
MwoI GCNNNNNNNGC 5 cut(s) 43, 494, 667, 1040, 1073
NciI CCSGG 1 cut(s) 1108
NcoI CCATGG 1 cut(s) 418
NdeII GATC 6 cut(s) 502, 626, 927, 1523, 1667, 1792
NheI GCTAGC 1 cut(s) 1693
NlaIII CATG 9 cut(s) 50, 294, 422, 1180, 1200, 1340, 1485, 1929, 1935
NlaIV GGNNCC 9 cut(s) 174, 175, 504, 1017, 1042, 1238, 1239, 1361, 1715
NmuCI GTSAC 1 cut(s) 1186
NspI RCATGY 2 cut(s) 50, 1929
NspV TTCGAA 1 cut(s) 912
PceI AGGCCT 1 cut(s) 1806
PcsI WCGNNNNNNNCGW 2 cut(s) 974, 1714
PfeI GAWTC 6 cut(s) 26, 67, 196, 423, 1294, 1306
PflMI CCANNNNNTGG 1 cut(s) 564
PkrI GCNGC 6 cut(s) 118, 868, 1006, 1036, 1152, 1677
PleI GAGTC 3 cut(s) 675, 1094, 1560
PpsI GAGTC 3 cut(s) 675, 1094, 1560
Ppu21I YACGTR 1 cut(s) 1709
PsiI TTATAA 1 cut(s) 315
PspEI GGTNACC 1 cut(s) 1271
PspFI CCCAGC 1 cut(s) 497
PspN4I GGNNCC 9 cut(s) 174, 175, 504, 1017, 1042, 1238, 1239, 1361, 1715
PspOMI GGGCCC 2 cut(s) 173, 1237
PspPI GGNCC 6 cut(s) 173, 174, 567, 1015, 1237, 1238
PstI CTGCAG 2 cut(s) 118, 1039
PsuI RGATCY 2 cut(s) 502, 1523
PvuII CAGCTG 1 cut(s) 1034
RsaI GTAC 2 cut(s) 1854, 1871
RsaNI GTAC 2 cut(s) 1853, 1870
RseI CAYNNNNRTG 2 cut(s) 1930, 1982
SatI GCNGC 6 cut(s) 117, 867, 1005, 1035, 1151, 1676
Sau3AI GATC 6 cut(s) 502, 626, 927, 1523, 1667, 1792
Sau96I GGNCC 6 cut(s) 173, 174, 567, 1015, 1237, 1238
ScaI AGTACT 1 cut(s) 1854
SchI GAGTC 3 cut(s) 675, 1094, 1560
ScrFI CCNGG 1 cut(s) 1108
SduI GDGCHC 2 cut(s) 177, 1241
SfaNI GCATC 3 cut(s) 475, 1063, 1081
SfcI CTRYAG 2 cut(s) 114, 1035
SfuI TTCGAA 1 cut(s) 912
SinI GGWCC 2 cut(s) 567, 1015
SmiMI CAYNNNNRTG 2 cut(s) 1930, 1982
SmlI CTYRAG 4 cut(s) 147, 326, 851, 887
SmoI CTYRAG 4 cut(s) 147, 326, 851, 887
SseBI AGGCCT 1 cut(s) 1806
SsiI CCGC 3 cut(s) 1067, 1082, 1819
SspI AATATT 1 cut(s) 2059
SspMI CTAG 3 cut(s) 1694, 1782, 1940
StuI AGGCCT 1 cut(s) 1806
StyD4I CCNGG 1 cut(s) 1106
StyI CCWWGG 3 cut(s) 418, 834, 1536
TaaI ACNGT 4 cut(s) 212, 414, 589, 637
TaiI ACGT 5 cut(s) 373, 971, 1193, 1711, 2028
TaqI TCGA 6 cut(s) 625, 912, 935, 949, 1670, 1830
TatI WGTACW 1 cut(s) 1852
TfiI GAWTC 6 cut(s) 26, 67, 196, 423, 1294, 1306
TscAI CASTG 3 cut(s) 217, 223, 417
TseFI GTSAC 1 cut(s) 1186
TseI GCWGC 6 cut(s) 116, 866, 1004, 1034, 1150, 1675
Tsp45I GTSAC 1 cut(s) 1186
TspGWI ACGGA 3 cut(s) 1028, 1272, 1387
TspRI CASTG 3 cut(s) 217, 223, 417
Van91I CCANNNNNTGG 1 cut(s) 564
Vha464I CTTAAG 1 cut(s) 326
VpaK11BI GGWCC 2 cut(s) 567, 1015
XagI CCTNNNNNAGG 1 cut(s) 833
XceI RCATGY 2 cut(s) 50, 1929
XcmI CCANNNNNNNNNTGG 1 cut(s) 1479
XmiI GTMKAC 4 cut(s) 307, 521, 845, 1922
XspI CTAG 3 cut(s) 1694, 1782, 1940
ZrmI AGTACT 1 cut(s) 1854
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.