RchiOBHm_Chr2g0175291

Mitochondrial protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0001471
Physical Location & Seq
Reverse (-)
87564985 .. 87567643
2659 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54238

Sequence Viewer

Length: 1881 bp
ATGGCTATTACTCAAACCACTGTGTACCTTCCTAACATTCTGTTTGATGAAACTGAAGGCTCCATTGATACTAGTTCTCAACCTGGAATTGGTGTGTCTATTGAATTAGAACGCTCTTCTTTACGCCCTACTAGTCAACTTTCCAATTCTAATATTTTACATCCTGTGGAGGGGTTGACTGCTGCTACCACAAATGACCATCACATGTTGACTAGAAGCAAACGAGGGATTGTTAAGAAAAAGGCTTTTCTCTCTGTTCTTTCTTCTATATGTTCAGACTCTACACTCTCAGAACCTTATTCACACAAAACAGCTCTCAAAGTTCCTGCTTGGAAGTCTGCTATGCAAGAAGAATATGATGCTCTAATCAATCAAAATACGTGGACATTGGTTCCACTACCCCCTGATAAAAATCTCGTATCTTGCAAGTGGATTTTTAAAATAAAGAAGAATGCCGATGGTTCTATTGCTCGACACAAAGCTCGACTTGTTGCTCGCGGTTTTAGCCAGGAATATGGTATCGATTATGATGAAACATATTCACCTGTTGTTCGACACACAACTGTACGTATGATTCTCAGTATTGCAGCCTCTTATGGCTGGCCATTACATCAACTTGATGTCAAGAATGCCTTCTTGCATGGTGTGCTTAATGAAGAGGTGTACATGACACAACCTCCTGGGTTTGAAGACTCACAGCATCCCACTCATGTTTGCAAGCTTCAAAAATCTCTCTATGGTCTTAAGCAGGCACCTCGAGCATGGAATGAACGGTTTGCCTCCTTCTTACCTTCTCTTGGCTTTAAATCTTCATATGCAGATCCTTCACTTTTTACTCTTATCTCTGGCACTTCCAAGGCTTATCTTCTCTTATATGTAGACGACATCATACTTACTGGCAATTGTGATAAACTTTTGGCTGAGATTAAAACCTCCTTGCAACATGAGTTCGAAATGAAGGACTTAGGTCCCCTTCATTATTTTCTGGGCCTAGAGATAAAATATCTATCACATGGCCTATTTGTGTCACAACAAAAATATGCCAGAGATCTTATTCACAAAGCAGGGTTGGATGATTGTCATTCTCACATTACACCATGTCAGTCCGGCCTCAAGCTTCTCAAAGACCACGGCACACCCCTTTCCTCCAATGACGCTGCTCAATTCAGAAGTCTTGTGGGTTGCTTGCAGTATCTTACATTCACTAGGCCTGACATTGCCTTTAGTGTAAATTCTGTGTGTCAATTTTTGCATTGCCCCACTGATCAACACTTCACTGCTGCTAAACGTATACTCAAGTATGTCAAGGGCACAAATGATTATGGCATTACCTTCAGGAGGGGCTCTTTTTCTTCTTCTGATGGCAGTCTATCACTTCAAGTCTTTTCTGATCACAATTTCTCCCTTCAAGCCTATAGTGATGCAGATTGGGCTGGGGACCCAAATGATCGCAAATCAACCACAGGCTTTGTCATTCTCCTTAACGGTTCTCCAGTTTCGTGGTGTAGTAAGAAGCAAACCGCTGTTTCCCGATCATCTACGGAGGCCGAGTATCGTAGCATGGCTGATACAACCTCTGAGCTGCAATGGCTCAAACATCTTCTTACTGATTTGCATCTCACACTTGACTCTACACCTACTCTTCACTGTGACAACATATCCGCTCTTGCTCTTGCCACAAACCCTGTGCATCATTCCAAGCTCAAACATATCGAAGTCGATATCCATTTTACACGAGACAAGGTCCGAGATGGTTCAATCCGCCTTCAATTTGTTTGCTCTCAAGAACAGCTCGCTGATCTCTTCACCAAGGGTCTCTGTTCTCCACAACATGATTATCTGTGTTCCAGCTTGATGCTTGGTTCCCCCCCATCAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_2

Protein Analysis

626

Amino Acids

69.79

Weight (kDa)

7.15

Isoelectric Point (pI)

44.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_2 PF07727 126 - 367 3.3e-75 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 751
AccBSI CCGCTC 1 cut(s) 1664
AccI GTMKAC 2 cut(s) 879, 1291
AccII CGCG 1 cut(s) 498
AciI CCGC 4 cut(s) 498, 1521, 1662, 1762
AclWI GGATC 1 cut(s) 815
AcoI YGGCCR 1 cut(s) 602
AcsI RAATTY 1 cut(s) 1231
AcuI CTGAAG 2 cut(s) 75, 1318
AfaI GTAC 3 cut(s) 26, 567, 665
AfiI CCNNNNNNNGG 4 cut(s) 89, 170, 797, 1338
AflII CTTAAG 1 cut(s) 743
AflIII ACRYGT 1 cut(s) 204
AgsI TTSAA 7 cut(s) 104, 689, 725, 1379, 1409, 1758, 1769
AhlI ACTAGT 2 cut(s) 71, 131
AjnI CCWGG 3 cut(s) 82, 507, 679
AluBI AGCT 9 cut(s) 314, 482, 721, 1117, 1582, 1702, 1792, 1851, 1878
AluI AGCT 9 cut(s) 314, 482, 721, 1117, 1582, 1702, 1792, 1851, 1878
Alw26I GTCTC 2 cut(s) 1731, 1820
AlwI GGATC 1 cut(s) 815
Ama87I CYCGRG 1 cut(s) 756
AoxI GGCC 6 cut(s) 602, 988, 1015, 1108, 1208, 1545
ApeKI GCWGC 5 cut(s) 182, 587, 1157, 1280, 1582
ApoI RAATTY 1 cut(s) 1231
Asp700I GAANNNNTTC 1 cut(s) 632
AspS9I GGNCC 4 cut(s) 968, 988, 1438, 1744
AsuHPI GGTGA 2 cut(s) 534, 1798
AsuII TTCGAA 1 cut(s) 951
AvaI CYCGRG 1 cut(s) 756
AvaII GGWCC 3 cut(s) 968, 1438, 1744
BaeGI GKGCMC 1 cut(s) 1313
BalI TGGCCA 1 cut(s) 604
BanI GGYRCC 1 cut(s) 751
BanII GRGCYC 1 cut(s) 1346
BauI CACGAG 1 cut(s) 1734
BbsI GAAGAC 1 cut(s) 696
BbvI GCAGC 5 cut(s) 169, 599, 1144, 1267, 1569
BccI CCATC 5 cut(s) 207, 452, 1355, 1745, 1879
BceAI ACGGC 1 cut(s) 1147
BcgI CGANNNNNNTGC 2 cut(s) 737, 771
BciT130I CCWGG 3 cut(s) 84, 509, 681
BclI TGATCA 2 cut(s) 1264, 1390
BcoDI GTCTC 2 cut(s) 1731, 1820
BcuI ACTAGT 2 cut(s) 71, 131
BfaI CTAG 5 cut(s) 72, 132, 213, 992, 1206
BfmI CTRYAG 1 cut(s) 1414
BfrI CTTAAG 1 cut(s) 743
BglII AGATCT 1 cut(s) 1048
BisI GCNGC 5 cut(s) 183, 588, 1158, 1281, 1583
BlsI GCNGC 5 cut(s) 184, 589, 1159, 1282, 1584
Bme1390I CCNGG 3 cut(s) 84, 509, 681
Bme18I GGWCC 3 cut(s) 968, 1438, 1744
BmeT110I CYCGRG 1 cut(s) 756
BmgT120I GGNCC 4 cut(s) 968, 988, 1438, 1744
BmiI GGNNCC 7 cut(s) 61, 393, 753, 970, 1439, 1440, 1864
BmrFI CCNGG 3 cut(s) 84, 509, 681
BmsI GCATC 6 cut(s) 349, 709, 1411, 1624, 1699, 1845
BoxI GACNNNNGTC 1 cut(s) 966
BpiI GAAGAC 1 cut(s) 696
BpmI CTGGAG 1 cut(s) 1476
Bpu14I TTCGAA 1 cut(s) 951
BpuEI CTTGAG 3 cut(s) 1097, 1280, 1767
Bsa29I ATCGAT 1 cut(s) 522
BsaAI YACGTR 2 cut(s) 381, 569
BsaBI GATNNNNATC 2 cut(s) 411, 1614
BsaI GGTCTC 1 cut(s) 1820
BsaJI CCNNGG 4 cut(s) 680, 855, 1129, 1809
BsaXI ACNNNNNCTCC 6 cut(s) 661, 691, 1385, 1415, 1535, 1565
Bsc4I CCNNNNNNNGG 4 cut(s) 89, 170, 797, 1338
Bse1I ACTGG 2 cut(s) 901, 1493
Bse3DI GCAATG 3 cut(s) 1215, 1252, 1592
Bse8I GATNNNNATC 2 cut(s) 411, 1614
BseBI CCWGG 3 cut(s) 84, 509, 681
BseCI ATCGAT 1 cut(s) 522
BseDI CCNNGG 4 cut(s) 680, 855, 1129, 1809
BseGI GGATG 3 cut(s) 160, 700, 1078
BseJI GATNNNNATC 2 cut(s) 411, 1614
BseLI CCNNNNNNNGG 4 cut(s) 89, 170, 797, 1338
BseMI GCAATG 3 cut(s) 1215, 1252, 1592
BseMII CTCAG 4 cut(s) 303, 592, 912, 1569
BseNI ACTGG 2 cut(s) 901, 1493
BseSI GKGCMC 1 cut(s) 1313
BseXI GCAGC 5 cut(s) 169, 599, 1144, 1267, 1569
BseYI CCCAGC 1 cut(s) 1433
Bsh1236I CGCG 1 cut(s) 498
BshFI GGCC 6 cut(s) 604, 990, 1017, 1110, 1210, 1547
BshNI GGYRCC 1 cut(s) 751
BshVI ATCGAT 1 cut(s) 522
BsiHKCI CYCGRG 1 cut(s) 756
BsiSI CCGG 1 cut(s) 1107
BslFI GGGAC 2 cut(s) 954, 1451
BslI CCNNNNNNNGG 4 cut(s) 89, 170, 797, 1338
BsmAI GTCTC 2 cut(s) 1731, 1820
BsmFI GGGAC 2 cut(s) 954, 1451
BsmI GAATGC 2 cut(s) 457, 634
BsnI GGCC 6 cut(s) 604, 990, 1017, 1110, 1210, 1547
Bso31I GGTCTC 1 cut(s) 1820
BsoBI CYCGRG 1 cut(s) 756
Bsp119I TTCGAA 1 cut(s) 951
Bsp1286I GDGCHC 2 cut(s) 1313, 1346
Bsp1407I TGTACA 1 cut(s) 663
Bsp143I GATC 7 cut(s) 820, 1048, 1264, 1390, 1447, 1532, 1798
BspACI CCGC 4 cut(s) 498, 1521, 1662, 1762
BspANI GGCC 6 cut(s) 604, 990, 1017, 1110, 1210, 1547
BspCNI CTCAG 4 cut(s) 302, 591, 913, 1570
BspDI ATCGAT 1 cut(s) 522
BspFNI CGCG 1 cut(s) 498
BspLI GGNNCC 7 cut(s) 61, 393, 753, 970, 1439, 1440, 1864
BspPI GGATC 1 cut(s) 815
BspQI GCTCTTC 1 cut(s) 121
BspT104I TTCGAA 1 cut(s) 951
BspT107I GGYRCC 1 cut(s) 751
BspTI CTTAAG 1 cut(s) 743
BspTNI GGTCTC 1 cut(s) 1820
BsrBI CCGCTC 1 cut(s) 1664
BsrDI GCAATG 3 cut(s) 1215, 1252, 1592
BsrGI TGTACA 1 cut(s) 663
BsrI ACTGG 2 cut(s) 901, 1493
BssECI CCNNGG 4 cut(s) 680, 855, 1129, 1809
BssMI GATC 7 cut(s) 820, 1048, 1264, 1390, 1447, 1532, 1798
BssNAI GTATAC 1 cut(s) 1292
BssSI CACGAG 1 cut(s) 1734
BssT1I CCWWGG 2 cut(s) 855, 1809
Bst1107I GTATAC 1 cut(s) 1292
Bst2BI CACGAG 1 cut(s) 1734
Bst2UI CCWGG 3 cut(s) 84, 509, 681
Bst4CI ACNGT 5 cut(s) 22, 565, 774, 1487, 1649
Bst6I CTCTTC 4 cut(s) 121, 651, 1647, 1808
BstAFI CTTAAG 1 cut(s) 743
BstAPI GCANNNNNTGC 1 cut(s) 646
BstAUI TGTACA 1 cut(s) 663
BstBAI YACGTR 2 cut(s) 381, 569
BstBI TTCGAA 1 cut(s) 951
BstC8I GCNNGC 6 cut(s) 496, 602, 719, 750, 1187, 1794
BstDEI CTNAG 5 cut(s) 289, 578, 921, 964, 1578
BstDSI CCRYGG 1 cut(s) 1129
BstENI CCTNNNNNAGG 1 cut(s) 1336
BstF5I GGATG 3 cut(s) 160, 700, 1078
BstFNI CGCG 1 cut(s) 498
BstKTI GATC 7 cut(s) 823, 1051, 1267, 1393, 1450, 1535, 1801
BstMAI GTCTC 2 cut(s) 1731, 1820
BstMBI GATC 7 cut(s) 820, 1048, 1264, 1390, 1447, 1532, 1798
BstMWI GCNNNNNNNGC 5 cut(s) 504, 646, 758, 1430, 1588
BstNI CCWGG 3 cut(s) 84, 509, 681
BstNSI RCATGY 1 cut(s) 208
BstPAI GACNNNNGTC 1 cut(s) 966
BstSCI CCNGG 3 cut(s) 82, 507, 679
BstSFI CTRYAG 1 cut(s) 1414
BstSLI GKGCMC 1 cut(s) 1313
BstSNI TACGTA 1 cut(s) 569
BstUI CGCG 1 cut(s) 498
BstV1I GCAGC 5 cut(s) 169, 599, 1144, 1267, 1569
BstV2I GAAGAC 1 cut(s) 696
BstX2I RGATCY 2 cut(s) 820, 1048
BstXI CCANNNNNNTGG 2 cut(s) 515, 1500
BstYI RGATCY 2 cut(s) 820, 1048
BstZ17I GTATAC 1 cut(s) 1292
Bsu15I ATCGAT 1 cut(s) 522
BsuRI GGCC 6 cut(s) 604, 990, 1017, 1110, 1210, 1547
BsuTUI ATCGAT 1 cut(s) 522
BtgI CCRYGG 1 cut(s) 1129
BtsCI GGATG 3 cut(s) 160, 700, 1078
BtsI GCAGTG 1 cut(s) 1275
BtsIMutI CAGTG 4 cut(s) 18, 1260, 1275, 1645
Cac8I GCNNGC 6 cut(s) 496, 602, 719, 750, 1187, 1794
Cfr13I GGNCC 4 cut(s) 968, 988, 1438, 1744
ClaI ATCGAT 1 cut(s) 522
CseI GACGC 1 cut(s) 1163
Csp6I GTAC 3 cut(s) 25, 566, 664
CspCI CAANNNNNGTGG 4 cut(s) 362, 397, 1450, 1485
CviQI GTAC 3 cut(s) 25, 566, 664
DdeI CTNAG 5 cut(s) 289, 578, 921, 964, 1578
DpnI GATC 7 cut(s) 822, 1050, 1266, 1392, 1449, 1534, 1800
DpnII GATC 7 cut(s) 820, 1048, 1264, 1390, 1447, 1532, 1798
DraI TTTAAA 2 cut(s) 439, 805
EaeI YGGCCR 1 cut(s) 602
Eam1104I CTCTTC 4 cut(s) 121, 651, 1647, 1808
EarI CTCTTC 4 cut(s) 121, 651, 1647, 1808
EciI GGCGGA 1 cut(s) 1751
Eco105I TACGTA 1 cut(s) 569
Eco130I CCWWGG 2 cut(s) 855, 1809
Eco147I AGGCCT 1 cut(s) 1210
Eco24I GRGCYC 1 cut(s) 1346
Eco31I GGTCTC 1 cut(s) 1820
Eco32I GATATC 1 cut(s) 1723
Eco47I GGWCC 3 cut(s) 968, 1438, 1744
Eco57I CTGAAG 2 cut(s) 75, 1318
Eco88I CYCGRG 1 cut(s) 756
EcoNI CCTNNNNNAGG 1 cut(s) 1336
EcoO109I RGGNCCY 2 cut(s) 968, 1438
EcoRII CCWGG 3 cut(s) 82, 507, 679
EcoRV GATATC 1 cut(s) 1723
EcoT14I CCWWGG 2 cut(s) 855, 1809
EcoT38I GRGCYC 1 cut(s) 1346
ErhI CCWWGG 2 cut(s) 855, 1809
FalI AAGNNNNNCTT 4 cut(s) 471, 503, 617, 649
FaqI GGGAC 2 cut(s) 954, 1451
FauNDI CATATG 1 cut(s) 814
FbaI TGATCA 2 cut(s) 1264, 1390
FblI GTMKAC 2 cut(s) 879, 1291
Fnu4HI GCNGC 5 cut(s) 183, 588, 1158, 1281, 1583
FokI GGATG 3 cut(s) 147, 687, 1085
FriOI GRGCYC 1 cut(s) 1346
Fsp4HI GCNGC 5 cut(s) 183, 588, 1158, 1281, 1583
FspBI CTAG 5 cut(s) 72, 132, 213, 992, 1206
GluI GCNGC 5 cut(s) 183, 588, 1158, 1281, 1583
GsaI CCCAGC 1 cut(s) 1437
GsuI CTGGAG 1 cut(s) 1476
HaeIII GGCC 6 cut(s) 604, 990, 1017, 1110, 1210, 1547
HapII CCGG 1 cut(s) 1107
HgaI GACGC 1 cut(s) 1163
HincII GTYRAC 3 cut(s) 137, 177, 210
HindII GTYRAC 3 cut(s) 137, 177, 210
HindIII AAGCTT 2 cut(s) 719, 1115
HinfI GANTC 4 cut(s) 278, 574, 692, 1628
HpaII CCGG 1 cut(s) 1107
HphI GGTGA 2 cut(s) 534, 1798
Hpy166II GTNNAC 8 cut(s) 25, 137, 177, 210, 384, 664, 880, 1292
Hpy188I TCNGA 7 cut(s) 277, 292, 1169, 1360, 1390, 1579, 1748
Hpy188III TCNNGA 4 cut(s) 625, 1336, 1530, 1784
Hpy8I GTNNAC 8 cut(s) 25, 137, 177, 210, 384, 664, 880, 1292
HpyCH4III ACNGT 5 cut(s) 22, 565, 774, 1487, 1649
HpyCH4IV ACGT 3 cut(s) 380, 568, 1288
HpyF10VI GCNNNNNNNGC 5 cut(s) 504, 646, 758, 1430, 1588
HpyF3I CTNAG 5 cut(s) 289, 578, 921, 964, 1578
HpySE526I ACGT 3 cut(s) 380, 568, 1288
KflI GGGWCCC 1 cut(s) 1438
Ksp22I TGATCA 2 cut(s) 1264, 1390
Kzo9I GATC 7 cut(s) 820, 1048, 1264, 1390, 1447, 1532, 1798
LguI GCTCTTC 1 cut(s) 121
LmnI GCTCC 1 cut(s) 65
Lsp1109I GCAGC 5 cut(s) 169, 599, 1144, 1267, 1569
LweI GCATC 6 cut(s) 349, 709, 1411, 1624, 1699, 1845
MaeI CTAG 5 cut(s) 72, 132, 213, 992, 1206
MaeII ACGT 3 cut(s) 380, 568, 1288
MaeIII GTNAC 2 cut(s) 1026, 1649
MalI GATC 7 cut(s) 822, 1050, 1266, 1392, 1449, 1534, 1800
MbiI CCGCTC 1 cut(s) 1664
MboI GATC 7 cut(s) 820, 1048, 1264, 1390, 1447, 1532, 1798
MfeI CAATTG 1 cut(s) 901
MflI RGATCY 2 cut(s) 820, 1048
MhlI GDGCHC 2 cut(s) 1313, 1346
MlsI TGGCCA 1 cut(s) 604
MluCI AATT 9 cut(s) 87, 104, 145, 901, 1163, 1231, 1244, 1396, 1769
MluNI TGGCCA 1 cut(s) 604
MlyI GAGTC 3 cut(s) 272, 686, 1622
MmeI TCCRAC 1 cut(s) 1050
Mox20I TGGCCA 1 cut(s) 604
MroXI GAANNNNTTC 1 cut(s) 632
MscI TGGCCA 1 cut(s) 604
MseI TTAA 7 cut(s) 234, 438, 651, 744, 804, 927, 1482
Msp20I TGGCCA 1 cut(s) 604
MspA1I CMGCKG 1 cut(s) 1523
MspCI CTTAAG 1 cut(s) 743
MspI CCGG 1 cut(s) 1107
MspR9I CCNGG 3 cut(s) 84, 509, 681
MunI CAATTG 1 cut(s) 901
Mva1269I GAATGC 2 cut(s) 457, 634
MvaI CCWGG 3 cut(s) 84, 509, 681
MvnI CGCG 1 cut(s) 498
MwoI GCNNNNNNNGC 5 cut(s) 504, 646, 758, 1430, 1588
NdeI CATATG 1 cut(s) 814
NdeII GATC 7 cut(s) 820, 1048, 1264, 1390, 1447, 1532, 1798
NlaIV GGNNCC 7 cut(s) 61, 393, 753, 970, 1439, 1440, 1864
NmeAIII GCCGAG 1 cut(s) 1573
NmuCI GTSAC 2 cut(s) 1026, 1649
NspI RCATGY 1 cut(s) 208
NspV TTCGAA 1 cut(s) 951
PaeR7I CTCGAG 1 cut(s) 756
PceI AGGCCT 1 cut(s) 1210
PciI ACATGT 1 cut(s) 204
PciSI GCTCTTC 1 cut(s) 121
PctI GAATGC 2 cut(s) 457, 634
PdmI GAANNNNTTC 1 cut(s) 632
PfeI GAWTC 1 cut(s) 574
PflFI GACNNNGTC 1 cut(s) 1742
PkrI GCNGC 5 cut(s) 184, 589, 1159, 1282, 1584
PleI GAGTC 3 cut(s) 272, 686, 1622
PpsI GAGTC 3 cut(s) 272, 686, 1622
Ppu21I YACGTR 2 cut(s) 381, 569
PpuMI RGGWCCY 2 cut(s) 968, 1438
PscI ACATGT 1 cut(s) 204
PshAI GACNNNNGTC 1 cut(s) 966
Psp5II RGGWCCY 2 cut(s) 968, 1438
Psp6I CCWGG 3 cut(s) 82, 507, 679
PspFI CCCAGC 1 cut(s) 1433
PspGI CCWGG 3 cut(s) 82, 507, 679
PspN4I GGNNCC 7 cut(s) 61, 393, 753, 970, 1439, 1440, 1864
PspPI GGNCC 4 cut(s) 968, 988, 1438, 1744
PspPPI RGGWCCY 2 cut(s) 968, 1438
PspXI VCTCGAGB 1 cut(s) 756
PsuI RGATCY 2 cut(s) 820, 1048
PsyI GACNNNGTC 1 cut(s) 1742
RsaI GTAC 3 cut(s) 26, 567, 665
RsaNI GTAC 3 cut(s) 25, 566, 664
SapI GCTCTTC 1 cut(s) 121
SaqAI TTAA 7 cut(s) 234, 438, 651, 744, 804, 927, 1482
SatI GCNGC 5 cut(s) 183, 588, 1158, 1281, 1583
Sau3AI GATC 7 cut(s) 820, 1048, 1264, 1390, 1447, 1532, 1798
Sau96I GGNCC 4 cut(s) 968, 988, 1438, 1744
SchI GAGTC 3 cut(s) 272, 686, 1622
ScrFI CCNGG 3 cut(s) 84, 509, 681
SduI GDGCHC 2 cut(s) 1313, 1346
SfaNI GCATC 6 cut(s) 349, 709, 1411, 1624, 1699, 1845
SfcI CTRYAG 1 cut(s) 1414
Sfr274I CTCGAG 1 cut(s) 756
SfuI TTCGAA 1 cut(s) 951
SinI GGWCC 3 cut(s) 968, 1438, 1744
SlaI CTCGAG 1 cut(s) 756
SmlI CTYRAG 5 cut(s) 743, 756, 1112, 1295, 1782
SmoI CTYRAG 5 cut(s) 743, 756, 1112, 1295, 1782
SnaBI TACGTA 1 cut(s) 569
SpeI ACTAGT 2 cut(s) 71, 131
Sse9I AATT 9 cut(s) 87, 104, 145, 901, 1163, 1231, 1244, 1396, 1769
SseBI AGGCCT 1 cut(s) 1210
SsiI CCGC 4 cut(s) 498, 1521, 1662, 1762
SspI AATATT 1 cut(s) 154
SspMI CTAG 5 cut(s) 72, 132, 213, 992, 1206
StuI AGGCCT 1 cut(s) 1210
StyD4I CCNGG 3 cut(s) 82, 507, 679
StyI CCWWGG 2 cut(s) 855, 1809
TaaI ACNGT 5 cut(s) 22, 565, 774, 1487, 1649
TaiI ACGT 3 cut(s) 383, 571, 1291
TaqI TCGA 8 cut(s) 472, 484, 522, 553, 757, 951, 1713, 1719
TasI AATT 9 cut(s) 87, 104, 145, 901, 1163, 1231, 1244, 1396, 1769
TatI WGTACW 1 cut(s) 663
TfiI GAWTC 1 cut(s) 574
Tru1I TTAA 7 cut(s) 234, 438, 651, 744, 804, 927, 1482
Tru9I TTAA 7 cut(s) 234, 438, 651, 744, 804, 927, 1482
TscAI CASTG 4 cut(s) 25, 1267, 1282, 1652
TseFI GTSAC 2 cut(s) 1026, 1649
TseI GCWGC 5 cut(s) 182, 587, 1157, 1280, 1582
Tsp45I GTSAC 2 cut(s) 1026, 1649
TspDTI ATGAA 7 cut(s) 63, 546, 669, 783, 801, 965, 971
TspGWI ACGGA 1 cut(s) 1556
TspRI CASTG 4 cut(s) 25, 1267, 1282, 1652
Tth111I GACNNNGTC 1 cut(s) 1742
Vha464I CTTAAG 1 cut(s) 743
VpaK11BI GGWCC 3 cut(s) 968, 1438, 1744
XagI CCTNNNNNAGG 1 cut(s) 1336
XapI RAATTY 1 cut(s) 1231
XceI RCATGY 1 cut(s) 208
XhoI CTCGAG 1 cut(s) 756
XmiI GTMKAC 2 cut(s) 879, 1291
XmnI GAANNNNTTC 1 cut(s) 632
XspI CTAG 5 cut(s) 72, 132, 213, 992, 1206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.