Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0001471

Physical Location & Seq

Genomic Coordinates Reverse (-)

20639106 .. 20643704

Gene Structure 4599 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G016420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGGCTCTCATGAGTTTGCTTATGGCTACCTTGGATGAGGATATTGACAAGGTAACAAGAACAATTCTCTATCAAGGAAAGAGCAGTGAAGAAGGACTGTTCCTTTTCAAGACACCACAACTCACAACAATAAACCAACAATCTCACACTGCCTTAGTTGGGTTATCTGCTTCCTTTCCTAAGGCAAGATGCATAGATTGTCTTTTCCTGAGTCAAGTTCTCACTCTTCTGTACCTTTTCACAAAATACATTTTGATAGTGCCTTGTAAGTCTCTCCACATGTCTTCTCCATTTGAACTTCTATTTCACAAGTCTCCTGATTTGTCTCAGCTTAAGGTGTTTGGCTCTTCTTGCTATCCATATCTCAGGCCTTATGCTCATGACAAGCTTGATCCAAGAACTACTCAGTGTGTGTTCTTAGGCTATGCTTTAGGATATAAAGGTGTCTTCTGTTACAGTATTTCTCAAAATAAACTGTGGATGTCAAGACATGTTGTTCATGATGAAACCATTTTTCCCTTTCTGTTATCCTCCAAGCCTGCACCAATTCCGACTGATCCTGTGACTTATTTTCCTAGTTACTCCTGGTCACCTGCATTTGTGCAGTCTTCTTCTCTCACGTGTCAACCTCACAATGCACATCTTACTGAGCTACAGGACAATGCAGGTGATGAAGAGAATATTAATGCTAATTGCAGACTTACCAATCATGACACTAGTGAATCTCAGCTTCATACAACTCAGGACAGTCATCTGGTTCAATCTCAGGAAGAAAATATTTCTCACCCTGCAAATGTCGATGAATCTGCTGCATTGCTGACTGATAACCCTGCAGGAGGAAACCTTGAGATTGTTCTTACTATGGACAATGCTCATATTGATGATAACTATGTGCAAAATGATCAAGTGCATACGTCAGAAGCAGCTGCACAAACTGGTAATAGAGTTGTTCTTGGTCTAAATGACAATGAACTAAATACATTACAGTTTGGAGGGCTAGCAAGATTAGTTGCACAAGGGTATAGTCAATCTAAAGGTCTTGATTATGATGAGACTTTCAGTCCTGTTGTGAGGCATAGCACTGTGAGAATAATCATAGCACTGGCTGCAATGAACAATTGGGAATTGAGACAGTTAGATGTCAAGAATGCCTTTCTGCATGGTGATCTGAAAGAAGAGGTTTATATGGCTCAACCTCCAGGTTTTGTTGATTCAGTACACAATGATTATGTGTGTCTATTAAAGAAGTCTTTGTATTGTTTAAAGCAAGCTCCAAGGGCCTGGAATGAAAAATTCACAAGTTTTCTCCCAAATACTAATGGAATTCATGAGGTGATTTCTGAACTAAGCATGGTTTTTTTTATGAAAGATCTTGGTCCTCTAACCTACTTTCTTGGTTTGAAAATAGCTAAGTATGCTAAAGATCTCCTGGTCAAGGCAGGAATGGATATAGTCCGTCCTTGTAGTTCCCCTTGCCTTCCTCATTACCAAATGACAAGAGATCAAGTTTGTCAATTTATGACAAGTCCTACTGATGTTCACTTCAGTGCAGTTAAGAGAATACTGAGATATCTTCATGGCACCACTCACAAAGGCTTATTCTATAGTTCAGCTCATGCTCTATCCAATGCAGTTCAACTCAAAGCATTCTGTGATGCTGATTGGGCGGGTGAAGTATTTCAACGCCATTCAACCACTAGCTTTATCATCTATCTTGGCATGTGTCCAATCTCCTGGCAATCAAAGAAACAAGGTTATGTGTCTCGAAGTTCTACTGAAGCTGAGTACAGGAGCTTAGCTAATACTGCAGCAGAAGTAAGTTGGATACAACATCTCCTGTGTGATCTCAAGATCTCTATTCCAAGGGCTCCCTTGCTTAAATGCAACAATTTGTCTGCGTTAGCTCTTGCTTCTAATCCCGTATTTCATTCTAAGATCAAACACTTAGATAATGATTTCCATTTTGTTCGAGAACGTGTCCAGCTCAATGATTTGTGCCTTGAATATGTACCTACAACAGAACAGACTGCAGATATATTGACAAAAGGGTTGCCATCTCCACTCTTTCGTACTCATTGCATCAATCTCAGGCTAGTAACCCTAGCTGAACTTGAGAAGGGGTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RVT_2 Retrotran_gag_2 Retrotran_gag_3 Retrotrans_gag gag_pre-integrs rve

Protein Analysis

708

Amino Acids

79.47

Weight (kDa)

6.29

Isoelectric Point (pI)

44.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SH3_retrovirus	PF25597	116 - 177	3.6e-16	Retroviral polymerase SH3-like domain
RVT_2	PF07727	311 - 438	4.3e-38	Reverse transcriptase (RNA-dependent DNA polymerase)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001471)

Species	Orthologous Gene IDs
arabidopsis_thaliana	ATMG00240
fragaria_vesca	FvH4_1g25543 FvH4_3g07841 FvH4_3g14871 FvH4_4g13042 FvH4_4g19532 FvH4_4g27904 FvH4_5g11311 FvH4_5g24711 FvH4_6g16681
malus_domestica	MD01G1044800.v1.1 MD05G1032500.v1.1 MD14G1067200.v1.1
pyrus_communis	pycom02g08540 pycom02g19080 pycom03g19430 pycom05g02910 pycom15g04590 pycom16g02160 pycom16g25210
rosa_chinensis	RchiOBHm_Chr1g0313691 RchiOBHm_Chr1g0339121 RchiOBHm_Chr2g0119341 RchiOBHm_Chr2g0141981 RchiOBHm_Chr2g0155191 RchiOBHm_Chr2g0175291 RchiOBHm_Chr3g0475621 RchiOBHm_Chr3g0482011 RchiOBHm_Chr4g0401001 RchiOBHm_Chr5g0038401 RchiOBHm_Chr6g0253961 RchiOBHm_Chr6g0266711 RchiOBHm_Chr7g0198221 RchiOBHm_Chr7g0200081
rosa_laevigata	RLG00000035859
rosa_roxburghii	Rroxscaffold_4G00281750
rosa_wichuraiana	Rw1G008180 Rw1G040520 Rw2G014210 Rw2G020850 Rw2G043190 Rw2G049320 Rw4G005820 Rw4G021520 Rw5G011150 Rw5G016420 Rw6G010970 Rw7G015120 Rw7G015940 Rw7G019550 Rw7G023080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	601, 656
Acc36I	ACCTGC	2 cut(s)	601, 656
AccB1I	GGYRCC	1 cut(s)	1580
AciI	CCGC	1 cut(s)	1667
AclWI	GGATC	2 cut(s)	386, 551
AcsI	RAATTY	2 cut(s)	1292, 1323
AcuI	CTGAAG	2 cut(s)	1528, 1797
AcvI	CACGTG	1 cut(s)	621
AfaI	GTAC	5 cut(s)	233, 1218, 1787, 2010, 2071
AfiI	CCNNNNNNNGG	3 cut(s)	159, 836, 1435
AflII	CTTAAG	1 cut(s)	332
AflIII	ACRYGT	4 cut(s)	279, 490, 620, 1975
AgsI	TTSAA	8 cut(s)	109, 296, 761, 1402, 1637, 1682, 1692, 2003
AhdI	GACNNNNNGTC	1 cut(s)	1059
AhlI	ACTAGT	1 cut(s)	716
AjnI	CCWGG	5 cut(s)	584, 1198, 1280, 1428, 1733
AleI	CACNNNNGTG	1 cut(s)	1545
Alw26I	GTCTC	6 cut(s)	276, 318, 330, 1046, 1123, 1767
AlwI	GGATC	2 cut(s)	386, 551
AoxI	GGCC	2 cut(s)	368, 1278
ApeKI	GCWGC	5 cut(s)	809, 923, 926, 1106, 1808
ApoI	RAATTY	2 cut(s)	1292, 1323
AseI	ATTAAT	1 cut(s)	684
Asp700I	GAANNNNTTC	1 cut(s)	1677
AspS9I	GGNCC	2 cut(s)	1278, 1376
AsuHPI	GGTGA	6 cut(s)	582, 680, 776, 1175, 1345, 1682
AsuNHI	GCTAGC	1 cut(s)	997
AvaII	GGWCC	1 cut(s)	1376
AxyI	CCTNAGG	1 cut(s)	180
BanI	GGYRCC	1 cut(s)	1580
BanII	GRGCYC	1 cut(s)	1870
BbrPI	CACGTG	1 cut(s)	621
BbsI	GAAGAC	3 cut(s)	276, 439, 600
BbvI	GCAGC	5 cut(s)	796, 913, 935, 1093, 1820
BccI	CCATC	1 cut(s)	2062
BcgI	CGANNNNNNTGC	2 cut(s)	788, 822
BciT130I	CCWGG	5 cut(s)	586, 1200, 1282, 1430, 1735
BciVI	GTATCC	1 cut(s)	1818
BclI	TGATCA	1 cut(s)	901
BcoDI	GTCTC	6 cut(s)	276, 318, 330, 1046, 1123, 1767
BcuI	ACTAGT	1 cut(s)	716
BfaI	CTAG	6 cut(s)	576, 717, 998, 1698, 2093, 2102
BfmI	CTRYAG	5 cut(s)	653, 831, 1603, 1806, 2028
BfrI	CTTAAG	1 cut(s)	332
BfuAI	ACCTGC	2 cut(s)	601, 656
BfuI	GTATCC	1 cut(s)	1818
BglII	AGATCT	3 cut(s)	1369, 1423, 1851
BisI	GCNGC	5 cut(s)	810, 924, 927, 1107, 1809
BlpI	GCTNAGC	1 cut(s)	1795
BlsI	GCNGC	5 cut(s)	811, 925, 928, 1108, 1810
Bme1390I	CCNGG	5 cut(s)	586, 1200, 1282, 1430, 1735
Bme18I	GGWCC	1 cut(s)	1376
BmeRI	GACNNNNNGTC	1 cut(s)	1059
BmgT120I	GGNCC	2 cut(s)	1278, 1376
BmiI	GGNNCC	2 cut(s)	1582, 1869
BmrFI	CCNGG	5 cut(s)	586, 1200, 1282, 1430, 1735
BmsI	GCATC	3 cut(s)	179, 1645, 2088
BmtI	GCTAGC	1 cut(s)	1001
BpiI	GAAGAC	3 cut(s)	276, 439, 600
BpmI	CTGGAG	1 cut(s)	1182
Bpu1102I	GCTNAGC	1 cut(s)	1795
BpuEI	CTTGAG	2 cut(s)	866, 1832
BsaAI	YACGTR	1 cut(s)	621
BsaJI	CCNNGG	3 cut(s)	30, 1274, 1862
BsaXI	ACNNNNNCTCC	2 cut(s)	1818, 1848
Bsc4I	CCNNNNNNNGG	3 cut(s)	159, 836, 1435
Bse1I	ACTGG	2 cut(s)	940, 1107
Bse21I	CCTNAGG	1 cut(s)	180
Bse3DI	GCAATG	3 cut(s)	812, 1116, 2074
BseBI	CCWGG	5 cut(s)	586, 1200, 1282, 1430, 1735
BseDI	CCNNGG	3 cut(s)	30, 1274, 1862
BseGI	GGATG	2 cut(s)	40, 486
BseLI	CCNNNNNNNGG	3 cut(s)	159, 836, 1435
BseMI	GCAATG	3 cut(s)	812, 1116, 2074
BseNI	ACTGG	2 cut(s)	940, 1107
BseXI	GCAGC	5 cut(s)	796, 913, 935, 1093, 1820
BsgI	GTGCAG	4 cut(s)	525, 623, 912, 1569
BshFI	GGCC	2 cut(s)	370, 1280
BshNI	GGYRCC	1 cut(s)	1580
BslI	CCNNNNNNNGG	3 cut(s)	159, 836, 1435
BsmAI	GTCTC	6 cut(s)	276, 318, 330, 1046, 1123, 1767
BsmI	GAATGC	2 cut(s)	1153, 1646
BsnI	GGCC	2 cut(s)	370, 1280
Bsp1286I	GDGCHC	1 cut(s)	1870
Bsp1720I	GCTNAGC	1 cut(s)	1795
BspACI	CCGC	1 cut(s)	1667
BspANI	GGCC	2 cut(s)	370, 1280
BspHI	TCATGA	5 cut(s)	9, 379, 499, 709, 1327
BspLI	GGNNCC	2 cut(s)	1582, 1869
BspMAI	CTGCAG	3 cut(s)	835, 1810, 2032
BspMI	ACCTGC	2 cut(s)	601, 656
BspOI	GCTAGC	1 cut(s)	1001
BspPI	GGATC	2 cut(s)	386, 551
BspQI	GCTCTTC	1 cut(s)	352
BspT107I	GGYRCC	1 cut(s)	1580
BspTI	CTTAAG	1 cut(s)	332
BsrDI	GCAATG	3 cut(s)	812, 1116, 2074
BsrI	ACTGG	2 cut(s)	940, 1107
BssECI	CCNNGG	3 cut(s)	30, 1274, 1862
BssT1I	CCWWGG	3 cut(s)	30, 1274, 1862
Bst2UI	CCWGG	5 cut(s)	586, 1200, 1282, 1430, 1735
Bst4CI	ACNGT	7 cut(s)	99, 458, 477, 749, 987, 1084, 1134
Bst6I	CTCTTC	4 cut(s)	231, 352, 669, 1170
BstAFI	CTTAAG	1 cut(s)	332
BstAPI	GCANNNNNTGC	1 cut(s)	1106
BstBAI	YACGTR	1 cut(s)	621
BstC8I	GCNNGC	3 cut(s)	540, 999, 1269
BstEII	GGTNACC	1 cut(s)	588
BstENI	CCTNNNNNAGG	2 cut(s)	834, 1433
BstF5I	GGATG	2 cut(s)	40, 486
BstMAI	GTCTC	6 cut(s)	276, 318, 330, 1046, 1123, 1767
BstMWI	GCNNNNNNNGC	6 cut(s)	351, 1106, 1277, 1415, 1664, 1805
BstNI	CCWGG	5 cut(s)	586, 1200, 1282, 1430, 1735
BstNSI	RCATGY	3 cut(s)	283, 494, 1723
BstPI	GGTNACC	1 cut(s)	588
BstSCI	CCNGG	5 cut(s)	584, 1198, 1280, 1428, 1733
BstSFI	CTRYAG	5 cut(s)	653, 831, 1603, 1806, 2028
BstV1I	GCAGC	5 cut(s)	796, 913, 935, 1093, 1820
BstV2I	GAAGAC	3 cut(s)	276, 439, 600
BstX2I	RGATCY	3 cut(s)	1369, 1423, 1851
BstXI	CCANNNNNNTGG	2 cut(s)	1281, 1734
BstYI	RGATCY	3 cut(s)	1369, 1423, 1851
Bsu36I	CCTNAGG	1 cut(s)	180
BsuI	GTATCC	1 cut(s)	1818
BsuRI	GGCC	2 cut(s)	370, 1280
BtsCI	GGATG	2 cut(s)	40, 486
BtsI	GCAGTG	2 cut(s)	91, 147
BtsIMutI	CAGTG	6 cut(s)	91, 147, 413, 1080, 1100, 1552
BveI	ACCTGC	2 cut(s)	601, 656
Cac8I	GCNNGC	3 cut(s)	540, 999, 1269
CciI	TCATGA	5 cut(s)	9, 379, 499, 709, 1327
Cfr13I	GGNCC	2 cut(s)	1278, 1376
Csp6I	GTAC	5 cut(s)	232, 1217, 1786, 2009, 2070
CviQI	GTAC	5 cut(s)	232, 1217, 1786, 2009, 2070
DraI	TTTAAA	1 cut(s)	1263
DriI	GACNNNNNGTC	1 cut(s)	1059
Eam1104I	CTCTTC	4 cut(s)	231, 352, 669, 1170
Eam1105I	GACNNNNNGTC	1 cut(s)	1059
EarI	CTCTTC	4 cut(s)	231, 352, 669, 1170
Eco130I	CCWWGG	3 cut(s)	30, 1274, 1862
Eco147I	AGGCCT	1 cut(s)	370
Eco24I	GRGCYC	1 cut(s)	1870
Eco32I	GATATC	1 cut(s)	1571
Eco47I	GGWCC	1 cut(s)	1376
Eco57I	CTGAAG	2 cut(s)	1528, 1797
Eco72I	CACGTG	1 cut(s)	621
Eco81I	CCTNAGG	1 cut(s)	180
Eco91I	GGTNACC	1 cut(s)	588
EcoNI	CCTNNNNNAGG	2 cut(s)	834, 1433
EcoO109I	RGGNCCY	1 cut(s)	1278
EcoO65I	GGTNACC	1 cut(s)	588
EcoRI	GAATTC	1 cut(s)	1323
EcoRII	CCWGG	5 cut(s)	584, 1198, 1280, 1428, 1733
EcoRV	GATATC	1 cut(s)	1571
EcoT14I	CCWWGG	3 cut(s)	30, 1274, 1862
EcoT22I	ATGCAT	1 cut(s)	194
EcoT38I	GRGCYC	1 cut(s)	1870
ErhI	CCWWGG	3 cut(s)	30, 1274, 1862
FalI	AAGNNNNNCTT	2 cut(s)	1136, 1168
FauI	CCCGC	1 cut(s)	1660
FbaI	TGATCA	1 cut(s)	901
Fnu4HI	GCNGC	5 cut(s)	810, 924, 927, 1107, 1809
FokI	GGATG	2 cut(s)	47, 493
FriOI	GRGCYC	1 cut(s)	1870
Fsp4HI	GCNGC	5 cut(s)	810, 924, 927, 1107, 1809
FspBI	CTAG	6 cut(s)	576, 717, 998, 1698, 2093, 2102
GluI	GCNGC	5 cut(s)	810, 924, 927, 1107, 1809
GsuI	CTGGAG	1 cut(s)	1182
HaeIII	GGCC	2 cut(s)	370, 1280
HincII	GTYRAC	1 cut(s)	626
HindII	GTYRAC	1 cut(s)	626
HindIII	AAGCTT	1 cut(s)	386
HinfI	GANTC	4 cut(s)	211, 722, 803, 1211
HphI	GGTGA	6 cut(s)	582, 680, 776, 1175, 1345, 1682
Hpy166II	GTNNAC	3 cut(s)	626, 1219, 1540
Hpy188I	TCNGA	4 cut(s)	552, 919, 1170, 1342
Hpy8I	GTNNAC	3 cut(s)	626, 1219, 1540
HpyAV	CCTTC	3 cut(s)	86, 1487, 2110
HpyCH4III	ACNGT	7 cut(s)	99, 458, 477, 749, 987, 1084, 1134
HpyCH4IV	ACGT	3 cut(s)	620, 914, 1975
HpyF10VI	GCNNNNNNNGC	6 cut(s)	351, 1106, 1277, 1415, 1664, 1805
HpySE526I	ACGT	3 cut(s)	620, 914, 1975
Ksp22I	TGATCA	1 cut(s)	901
LguI	GCTCTTC	1 cut(s)	352
LmnI	GCTCC	3 cut(s)	1276, 1791, 1873
Lsp1109I	GCAGC	5 cut(s)	796, 913, 935, 1093, 1820
LweI	GCATC	3 cut(s)	179, 1645, 2088
MaeI	CTAG	6 cut(s)	576, 717, 998, 1698, 2093, 2102
MaeII	ACGT	3 cut(s)	620, 914, 1975
MaeIII	GTNAC	6 cut(s)	52, 452, 562, 578, 588, 2095
MfeI	CAATTG	1 cut(s)	1117
MflI	RGATCY	3 cut(s)	1369, 1423, 1851
MhlI	GDGCHC	1 cut(s)	1870
MluCI	AATT	9 cut(s)	63, 546, 691, 1117, 1124, 1292, 1323, 1514, 1888
MlyI	GAGTC	1 cut(s)	220
MmeI	TCCRAC	2 cut(s)	575, 1802
Mph1103I	ATGCAT	1 cut(s)	194
MroXI	GAANNNNTTC	1 cut(s)	1677
MseI	TTAA	7 cut(s)	333, 684, 1241, 1262, 1554, 1878, 2125
MslI	CAYNNNNRTG	2 cut(s)	879, 1545
MspA1I	CMGCKG	1 cut(s)	926
MspCI	CTTAAG	1 cut(s)	332
MspR9I	CCNGG	5 cut(s)	586, 1200, 1282, 1430, 1735
MunI	CAATTG	1 cut(s)	1117
Mva1269I	GAATGC	2 cut(s)	1153, 1646
MvaI	CCWGG	5 cut(s)	586, 1200, 1282, 1430, 1735
MwoI	GCNNNNNNNGC	6 cut(s)	351, 1106, 1277, 1415, 1664, 1805
NheI	GCTAGC	1 cut(s)	997
NlaIV	GGNNCC	2 cut(s)	1582, 1869
NmuCI	GTSAC	2 cut(s)	562, 588
NsiI	ATGCAT	1 cut(s)	194
NspI	RCATGY	3 cut(s)	283, 494, 1723
OliI	CACNNNNGTG	1 cut(s)	1545
PagI	TCATGA	5 cut(s)	9, 379, 499, 709, 1327
PaqCI	CACCTGC	2 cut(s)	601, 656
PceI	AGGCCT	1 cut(s)	370
PciI	ACATGT	2 cut(s)	279, 490
PciSI	GCTCTTC	1 cut(s)	352
PctI	GAATGC	2 cut(s)	1153, 1646
PdmI	GAANNNNTTC	1 cut(s)	1677
PfeI	GAWTC	3 cut(s)	722, 803, 1211
PkrI	GCNGC	5 cut(s)	811, 925, 928, 1108, 1810
PleI	GAGTC	1 cut(s)	219
PmaCI	CACGTG	1 cut(s)	621
PmlI	CACGTG	1 cut(s)	621
PpsI	GAGTC	1 cut(s)	219
Ppu21I	YACGTR	1 cut(s)	621
PscI	ACATGT	2 cut(s)	279, 490
PshBI	ATTAAT	1 cut(s)	684
Psp6I	CCWGG	5 cut(s)	584, 1198, 1280, 1428, 1733
PspCI	CACGTG	1 cut(s)	621
PspEI	GGTNACC	1 cut(s)	588
PspGI	CCWGG	5 cut(s)	584, 1198, 1280, 1428, 1733
PspN4I	GGNNCC	2 cut(s)	1582, 1869
PspPI	GGNCC	2 cut(s)	1278, 1376
PstI	CTGCAG	3 cut(s)	835, 1810, 2032
PsuI	RGATCY	3 cut(s)	1369, 1423, 1851
PvuII	CAGCTG	1 cut(s)	926
RsaI	GTAC	5 cut(s)	233, 1218, 1787, 2010, 2071
RsaNI	GTAC	5 cut(s)	232, 1217, 1786, 2009, 2070
RseI	CAYNNNNRTG	2 cut(s)	879, 1545
SapI	GCTCTTC	1 cut(s)	352
SaqAI	TTAA	7 cut(s)	333, 684, 1241, 1262, 1554, 1878, 2125
SatI	GCNGC	5 cut(s)	810, 924, 927, 1107, 1809
Sau96I	GGNCC	2 cut(s)	1278, 1376
SbfI	CCTGCAGG	1 cut(s)	835
SchI	GAGTC	1 cut(s)	220
ScrFI	CCNGG	5 cut(s)	586, 1200, 1282, 1430, 1735
SdaI	CCTGCAGG	1 cut(s)	835
SduI	GDGCHC	1 cut(s)	1870
SfaNI	GCATC	3 cut(s)	179, 1645, 2088
SfcI	CTRYAG	5 cut(s)	653, 831, 1603, 1806, 2028
SinI	GGWCC	1 cut(s)	1376
SmiMI	CAYNNNNRTG	2 cut(s)	879, 1545
SmlI	CTYRAG	4 cut(s)	332, 845, 1847, 2111
SmoI	CTYRAG	4 cut(s)	332, 845, 1847, 2111
SpeI	ACTAGT	1 cut(s)	716
Sse8387I	CCTGCAGG	1 cut(s)	835
Sse9I	AATT	9 cut(s)	63, 546, 691, 1117, 1124, 1292, 1323, 1514, 1888
SseBI	AGGCCT	1 cut(s)	370
SsiI	CCGC	1 cut(s)	1667
SspI	AATATT	2 cut(s)	682, 778
SspMI	CTAG	6 cut(s)	576, 717, 998, 1698, 2093, 2102
StuI	AGGCCT	1 cut(s)	370
StyD4I	CCNGG	5 cut(s)	584, 1198, 1280, 1428, 1733
StyI	CCWWGG	3 cut(s)	30, 1274, 1862
TaaI	ACNGT	7 cut(s)	99, 458, 477, 749, 987, 1084, 1134
TaiI	ACGT	3 cut(s)	623, 917, 1978
TaqI	TCGA	3 cut(s)	798, 1765, 1969
TasI	AATT	9 cut(s)	63, 546, 691, 1117, 1124, 1292, 1323, 1514, 1888
TatI	WGTACW	2 cut(s)	1216, 1785
TfiI	GAWTC	3 cut(s)	722, 803, 1211
Tru1I	TTAA	7 cut(s)	333, 684, 1241, 1262, 1554, 1878, 2125
Tru9I	TTAA	7 cut(s)	333, 684, 1241, 1262, 1554, 1878, 2125
TscAI	CASTG	6 cut(s)	91, 154, 413, 1087, 1107, 1552
TseFI	GTSAC	2 cut(s)	562, 588
TseI	GCWGC	5 cut(s)	809, 923, 926, 1106, 1808
Tsp45I	GTSAC	2 cut(s)	562, 588
TspGWI	ACGGA	1 cut(s)	1445
TspRI	CASTG	6 cut(s)	91, 154, 413, 1087, 1107, 1552
Vha464I	CTTAAG	1 cut(s)	332
VpaK11BI	GGWCC	1 cut(s)	1376
VspI	ATTAAT	1 cut(s)	684
XagI	CCTNNNNNAGG	2 cut(s)	834, 1433
XapI	RAATTY	2 cut(s)	1292, 1323
XceI	RCATGY	3 cut(s)	283, 494, 1723
XmnI	GAANNNNTTC	1 cut(s)	1677
XspI	CTAG	6 cut(s)	576, 717, 998, 1698, 2093, 2102
Zsp2I	ATGCAT	1 cut(s)	194

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.