ABC transporter transmembrane region
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATMG00240 |
| fragaria_vesca | FvH4_1g25543 FvH4_3g07841 FvH4_3g14871 FvH4_4g13042 FvH4_4g19532 FvH4_4g27904 FvH4_5g11311 FvH4_5g24711 FvH4_6g16681 |
| malus_domestica | MD01G1044800.v1.1 MD05G1032500.v1.1 MD14G1067200.v1.1 |
| pyrus_communis | pycom02g08540 pycom02g19080 pycom03g19430 pycom05g02910 pycom15g04590 pycom16g02160 pycom16g25210 |
| rosa_chinensis | RchiOBHm_Chr1g0313691 RchiOBHm_Chr1g0339121 RchiOBHm_Chr2g0119341 RchiOBHm_Chr2g0141981 RchiOBHm_Chr2g0155191 RchiOBHm_Chr2g0175291 RchiOBHm_Chr3g0475621 RchiOBHm_Chr3g0482011 RchiOBHm_Chr4g0401001 RchiOBHm_Chr5g0038401 RchiOBHm_Chr6g0253961 RchiOBHm_Chr6g0266711 RchiOBHm_Chr7g0198221 RchiOBHm_Chr7g0200081 |
| rosa_laevigata | RLG00000035859 |
| rosa_roxburghii | Rroxscaffold_4G00281750 |
| rosa_wichuraiana | Rw1G008180 Rw1G040520 Rw2G014210 Rw2G020850 Rw2G043190 Rw2G049320 Rw4G005820 Rw4G021520 Rw5G011150 Rw5G016420 Rw6G010970 Rw7G015120 Rw7G015940 Rw7G019550 Rw7G023080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 102, 452 |
| AcsI | RAATTY | 1 cut(s) | 42 |
| AcuI | CTGAAG | 1 cut(s) | 410 |
| AgsI | TTSAA | 3 cut(s) | 41, 47, 236 |
| AjiI | CACGTC | 1 cut(s) | 697 |
| AluBI | AGCT | 4 cut(s) | 163, 505, 769, 795 |
| AluI | AGCT | 4 cut(s) | 163, 505, 769, 795 |
| Alw26I | GTCTC | 2 cut(s) | 161, 606 |
| AlwI | GGATC | 2 cut(s) | 102, 452 |
| ApeKI | GCWGC | 2 cut(s) | 326, 502 |
| ApoI | RAATTY | 1 cut(s) | 42 |
| AsuHPI | GGTGA | 4 cut(s) | 401, 467, 733, 773 |
| BaeGI | GKGCMC | 1 cut(s) | 359 |
| BbsI | GAAGAC | 1 cut(s) | 224 |
| BbvCI | CCTCAGC | 1 cut(s) | 745 |
| BbvI | GCAGC | 2 cut(s) | 338, 514 |
| BccI | CCATC | 3 cut(s) | 53, 446, 796 |
| BcoDI | GTCTC | 2 cut(s) | 161, 606 |
| BfaI | CTAG | 2 cut(s) | 252, 512 |
| BglII | AGATCT | 1 cut(s) | 716 |
| BisI | GCNGC | 2 cut(s) | 327, 503 |
| BlsI | GCNGC | 2 cut(s) | 328, 504 |
| BmgBI | CACGTC | 1 cut(s) | 697 |
| BmsI | GCATC | 2 cut(s) | 381, 430 |
| BpiI | GAAGAC | 1 cut(s) | 224 |
| Bpu10I | CCTNAGC | 1 cut(s) | 745 |
| BpuEI | CTTGAG | 1 cut(s) | 143 |
| BsaBI | GATNNNNATC | 1 cut(s) | 456 |
| BsaI | GGTCTC | 1 cut(s) | 161 |
| BsaJI | CCNNGG | 3 cut(s) | 31, 90, 727 |
| Bse1I | ACTGG | 2 cut(s) | 487, 667 |
| Bse8I | GATNNNNATC | 1 cut(s) | 456 |
| BseDI | CCNNGG | 3 cut(s) | 31, 90, 727 |
| BseGI | GGATG | 1 cut(s) | 457 |
| BseJI | GATNNNNATC | 1 cut(s) | 456 |
| BseMII | CTCAG | 5 cut(s) | 355, 515, 521, 551, 759 |
| BseNI | ACTGG | 2 cut(s) | 487, 667 |
| BseSI | GKGCMC | 1 cut(s) | 359 |
| BseXI | GCAGC | 2 cut(s) | 338, 514 |
| BsmAI | GTCTC | 2 cut(s) | 161, 606 |
| Bso31I | GGTCTC | 1 cut(s) | 161 |
| Bsp1286I | GDGCHC | 1 cut(s) | 359 |
| Bsp143I | GATC | 7 cut(s) | 94, 457, 466, 514, 591, 704, 716 |
| BspCNI | CTCAG | 5 cut(s) | 354, 516, 522, 552, 758 |
| BspHI | TCATGA | 2 cut(s) | 196, 588 |
| BspPI | GGATC | 2 cut(s) | 102, 452 |
| BspQI | GCTCTTC | 1 cut(s) | 423 |
| BspTNI | GGTCTC | 1 cut(s) | 161 |
| BsrI | ACTGG | 2 cut(s) | 487, 667 |
| BssECI | CCNNGG | 3 cut(s) | 31, 90, 727 |
| BssMI | GATC | 7 cut(s) | 94, 457, 466, 514, 591, 704, 716 |
| BssT1I | CCWWGG | 3 cut(s) | 31, 90, 727 |
| Bst4CI | ACNGT | 1 cut(s) | 178 |
| Bst6I | CTCTTC | 1 cut(s) | 423 |
| BstC8I | GCNNGC | 1 cut(s) | 767 |
| BstDEI | CTNAG | 5 cut(s) | 341, 524, 530, 560, 745 |
| BstF5I | GGATG | 1 cut(s) | 457 |
| BstKTI | GATC | 7 cut(s) | 97, 460, 469, 517, 594, 707, 719 |
| BstMAI | GTCTC | 2 cut(s) | 161, 606 |
| BstMBI | GATC | 7 cut(s) | 94, 457, 466, 514, 591, 704, 716 |
| BstSLI | GKGCMC | 1 cut(s) | 359 |
| BstV1I | GCAGC | 2 cut(s) | 338, 514 |
| BstV2I | GAAGAC | 1 cut(s) | 224 |
| BstX2I | RGATCY | 2 cut(s) | 94, 716 |
| BstYI | RGATCY | 2 cut(s) | 94, 716 |
| BtgZI | GCGATG | 1 cut(s) | 453 |
| BtrI | CACGTC | 1 cut(s) | 697 |
| BtsCI | GGATG | 1 cut(s) | 457 |
| BtsIMutI | CAGTG | 2 cut(s) | 174, 521 |
| Cac8I | GCNNGC | 1 cut(s) | 767 |
| CciI | TCATGA | 2 cut(s) | 196, 588 |
| CviAII | CATG | 5 cut(s) | 197, 368, 543, 589, 598 |
| DdeI | CTNAG | 5 cut(s) | 341, 524, 530, 560, 745 |
| DpnI | GATC | 7 cut(s) | 96, 459, 468, 516, 593, 706, 718 |
| DpnII | GATC | 7 cut(s) | 94, 457, 466, 514, 591, 704, 716 |
| DraI | TTTAAA | 1 cut(s) | 495 |
| Eam1104I | CTCTTC | 1 cut(s) | 423 |
| EarI | CTCTTC | 1 cut(s) | 423 |
| Eco130I | CCWWGG | 3 cut(s) | 31, 90, 727 |
| Eco31I | GGTCTC | 1 cut(s) | 161 |
| Eco32I | GATATC | 2 cut(s) | 202, 262 |
| Eco57I | CTGAAG | 1 cut(s) | 410 |
| EcoRV | GATATC | 2 cut(s) | 202, 262 |
| EcoT14I | CCWWGG | 3 cut(s) | 31, 90, 727 |
| ErhI | CCWWGG | 3 cut(s) | 31, 90, 727 |
| FaeI | CATG | 5 cut(s) | 200, 371, 546, 592, 601 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 694, 726 |
| FatI | CATG | 5 cut(s) | 196, 367, 542, 588, 597 |
| FauNDI | CATATG | 1 cut(s) | 268 |
| Fnu4HI | GCNGC | 2 cut(s) | 327, 503 |
| FokI | GGATG | 1 cut(s) | 464 |
| Fsp4HI | GCNGC | 2 cut(s) | 327, 503 |
| FspBI | CTAG | 2 cut(s) | 252, 512 |
| GluI | GCNGC | 2 cut(s) | 327, 503 |
| Hin1II | CATG | 5 cut(s) | 200, 371, 546, 592, 601 |
| HincII | GTYRAC | 1 cut(s) | 277 |
| HindII | GTYRAC | 1 cut(s) | 277 |
| HindIII | AAGCTT | 1 cut(s) | 161 |
| HinfI | GANTC | 1 cut(s) | 410 |
| HpaI | GTTAAC | 1 cut(s) | 277 |
| HphI | GGTGA | 4 cut(s) | 401, 467, 733, 773 |
| Hpy166II | GTNNAC | 2 cut(s) | 277, 521 |
| Hpy188I | TCNGA | 3 cut(s) | 215, 344, 561 |
| Hpy188III | TCNNGA | 5 cut(s) | 56, 197, 382, 512, 589 |
| Hpy8I | GTNNAC | 2 cut(s) | 277, 521 |
| HpyAV | CCTTC | 1 cut(s) | 379 |
| HpyCH4III | ACNGT | 1 cut(s) | 178 |
| HpyCH4IV | ACGT | 1 cut(s) | 696 |
| HpyCH4V | TGCA | 5 cut(s) | 298, 326, 443, 579, 646 |
| HpyF3I | CTNAG | 5 cut(s) | 341, 524, 530, 560, 745 |
| HpySE526I | ACGT | 1 cut(s) | 696 |
| Hsp92II | CATG | 5 cut(s) | 200, 371, 546, 592, 601 |
| KspAI | GTTAAC | 1 cut(s) | 277 |
| Kzo9I | GATC | 7 cut(s) | 94, 457, 466, 514, 591, 704, 716 |
| LguI | GCTCTTC | 1 cut(s) | 423 |
| LmnI | GCTCC | 1 cut(s) | 539 |
| Lsp1109I | GCAGC | 2 cut(s) | 338, 514 |
| LweI | GCATC | 2 cut(s) | 381, 430 |
| MaeI | CTAG | 2 cut(s) | 252, 512 |
| MaeII | ACGT | 1 cut(s) | 696 |
| MaeIII | GTNAC | 3 cut(s) | 125, 389, 692 |
| MalI | GATC | 7 cut(s) | 96, 459, 468, 516, 593, 706, 718 |
| MboI | GATC | 7 cut(s) | 94, 457, 466, 514, 591, 704, 716 |
| MboII | GAAGA | 5 cut(s) | 89, 224, 410, 416, 586 |
| MfeI | CAATTG | 1 cut(s) | 647 |
| MflI | RGATCY | 2 cut(s) | 94, 716 |
| MhlI | GDGCHC | 1 cut(s) | 359 |
| MluCI | AATT | 5 cut(s) | 42, 209, 290, 647, 687 |
| MnlI | CCTC | 4 cut(s) | 519, 555, 754, 794 |
| MseI | TTAA | 3 cut(s) | 276, 351, 494 |
| MslI | CAYNNNNRTG | 2 cut(s) | 321, 760 |
| MspA1I | CMGCKG | 1 cut(s) | 505 |
| MunI | CAATTG | 1 cut(s) | 647 |
| NdeI | CATATG | 1 cut(s) | 268 |
| NdeII | GATC | 7 cut(s) | 94, 457, 466, 514, 591, 704, 716 |
| NlaIII | CATG | 5 cut(s) | 200, 371, 546, 592, 601 |
| NmuCI | GTSAC | 3 cut(s) | 125, 389, 692 |
| PagI | TCATGA | 2 cut(s) | 196, 588 |
| PciSI | GCTCTTC | 1 cut(s) | 423 |
| PfeI | GAWTC | 1 cut(s) | 410 |
| PkrI | GCNGC | 2 cut(s) | 328, 504 |
| PsuI | RGATCY | 2 cut(s) | 94, 716 |
| PvuII | CAGCTG | 1 cut(s) | 505 |
| RseI | CAYNNNNRTG | 2 cut(s) | 321, 760 |
| SapI | GCTCTTC | 1 cut(s) | 423 |
| SaqAI | TTAA | 3 cut(s) | 276, 351, 494 |
| SatI | GCNGC | 2 cut(s) | 327, 503 |
| Sau3AI | GATC | 7 cut(s) | 94, 457, 466, 514, 591, 704, 716 |
| SduI | GDGCHC | 1 cut(s) | 359 |
| SetI | ASST | 9 cut(s) | 165, 259, 507, 566, 699, 746, 771, 786, 797 |
| SfaNI | GCATC | 2 cut(s) | 381, 430 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 321, 760 |
| SmlI | CTYRAG | 1 cut(s) | 158 |
| SmoI | CTYRAG | 1 cut(s) | 158 |
| Sse9I | AATT | 5 cut(s) | 42, 209, 290, 647, 687 |
| SspI | AATATT | 1 cut(s) | 50 |
| SspMI | CTAG | 2 cut(s) | 252, 512 |
| StyI | CCWWGG | 3 cut(s) | 31, 90, 727 |
| TaaI | ACNGT | 1 cut(s) | 178 |
| TaiI | ACGT | 1 cut(s) | 699 |
| TaqI | TCGA | 1 cut(s) | 469 |
| TasI | AATT | 5 cut(s) | 42, 209, 290, 647, 687 |
| TfiI | GAWTC | 1 cut(s) | 410 |
| Tru1I | TTAA | 3 cut(s) | 276, 351, 494 |
| Tru9I | TTAA | 3 cut(s) | 276, 351, 494 |
| TscAI | CASTG | 2 cut(s) | 181, 528 |
| TseFI | GTSAC | 3 cut(s) | 125, 389, 692 |
| TseI | GCWGC | 2 cut(s) | 326, 502 |
| Tsp45I | GTSAC | 3 cut(s) | 125, 389, 692 |
| TspDTI | ATGAA | 5 cut(s) | 11, 17, 410, 577, 586 |
| TspRI | CASTG | 2 cut(s) | 181, 528 |
| XapI | RAATTY | 1 cut(s) | 42 |
| XbaI | TCTAGA | 1 cut(s) | 511 |
| XspI | CTAG | 2 cut(s) | 252, 512 |