Nudix hydrolase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NUDIX | PF00293 | 16 - 135 | 8.5e-20 | NUDIX domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AbsI | CCTCGAGG | 1 cut(s) | 257 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 283, 337 |
| AciI | CCGC | 2 cut(s) | 141, 419 |
| AcoI | YGGCCR | 1 cut(s) | 142 |
| AcuI | CTGAAG | 1 cut(s) | 212 |
| AcyI | GRCGYC | 1 cut(s) | 97 |
| AfaI | GTAC | 1 cut(s) | 281 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 283, 337 |
| AflIII | ACRYGT | 1 cut(s) | 348 |
| AgsI | TTSAA | 1 cut(s) | 73 |
| AluBI | AGCT | 2 cut(s) | 165, 229 |
| AluI | AGCT | 2 cut(s) | 165, 229 |
| Ama87I | CYCGRG | 3 cut(s) | 43, 149, 257 |
| AoxI | GGCC | 3 cut(s) | 39, 142, 404 |
| ApeKI | GCWGC | 2 cut(s) | 179, 229 |
| AspS9I | GGNCC | 1 cut(s) | 40 |
| AsuHPI | GGTGA | 1 cut(s) | 170 |
| AvaI | CYCGRG | 3 cut(s) | 43, 149, 257 |
| BanII | GRGCYC | 2 cut(s) | 330, 345 |
| BbvI | GCAGC | 2 cut(s) | 191, 216 |
| BccI | CCATC | 1 cut(s) | 350 |
| BceAI | ACGGC | 2 cut(s) | 84, 256 |
| BfaI | CTAG | 1 cut(s) | 138 |
| BisI | GCNGC | 3 cut(s) | 142, 180, 230 |
| BlsI | GCNGC | 3 cut(s) | 143, 181, 231 |
| BmeT110I | CYCGRG | 3 cut(s) | 43, 149, 257 |
| BmgT120I | GGNCC | 1 cut(s) | 40 |
| BmiI | GGNNCC | 2 cut(s) | 42, 342 |
| BsaAI | YACGTR | 1 cut(s) | 283 |
| BsaBI | GATNNNNATC | 1 cut(s) | 318 |
| BsaHI | GRCGYC | 1 cut(s) | 97 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 283, 337 |
| Bse1I | ACTGG | 1 cut(s) | 277 |
| Bse8I | GATNNNNATC | 1 cut(s) | 318 |
| BseJI | GATNNNNATC | 1 cut(s) | 318 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 283, 337 |
| BseNI | ACTGG | 1 cut(s) | 277 |
| BseRI | GAGGAG | 1 cut(s) | 185 |
| BseXI | GCAGC | 2 cut(s) | 191, 216 |
| BsgI | GTGCAG | 2 cut(s) | 198, 443 |
| BshFI | GGCC | 3 cut(s) | 41, 144, 406 |
| BsiHKCI | CYCGRG | 3 cut(s) | 43, 149, 257 |
| BslFI | GGGAC | 1 cut(s) | 392 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 283, 337 |
| BsmFI | GGGAC | 1 cut(s) | 392 |
| BsnI | GGCC | 3 cut(s) | 41, 144, 406 |
| BsoBI | CYCGRG | 3 cut(s) | 43, 149, 257 |
| Bsp1286I | GDGCHC | 2 cut(s) | 330, 345 |
| Bsp143I | GATC | 1 cut(s) | 319 |
| BspACI | CCGC | 2 cut(s) | 141, 419 |
| BspANI | GGCC | 3 cut(s) | 41, 144, 406 |
| BspLI | GGNNCC | 2 cut(s) | 42, 342 |
| BsrI | ACTGG | 1 cut(s) | 277 |
| BssMI | GATC | 1 cut(s) | 319 |
| BssNI | GRCGYC | 1 cut(s) | 97 |
| Bst4CI | ACNGT | 1 cut(s) | 238 |
| BstACI | GRCGYC | 1 cut(s) | 97 |
| BstBAI | YACGTR | 1 cut(s) | 283 |
| BstC8I | GCNNGC | 1 cut(s) | 426 |
| BstKTI | GATC | 1 cut(s) | 322 |
| BstMBI | GATC | 1 cut(s) | 319 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 308, 425 |
| BstNSI | RCATGY | 2 cut(s) | 25, 352 |
| BstV1I | GCAGC | 2 cut(s) | 191, 216 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 402 |
| BsuRI | GGCC | 3 cut(s) | 41, 144, 406 |
| BtgZI | GCGATG | 1 cut(s) | 369 |
| BtsI | GCAGTG | 1 cut(s) | 309 |
| BtsIMutI | CAGTG | 1 cut(s) | 309 |
| Cac8I | GCNNGC | 1 cut(s) | 426 |
| Cfr13I | GGNCC | 1 cut(s) | 40 |
| CseI | GACGC | 1 cut(s) | 105 |
| Csp6I | GTAC | 1 cut(s) | 280 |
| CviAII | CATG | 4 cut(s) | 22, 248, 349, 450 |
| CviJI | RGCY | 9 cut(s) | 41, 144, 165, 229, 271, 328, 343, 406, 428 |
| CviKI_1 | RGCY | 9 cut(s) | 41, 144, 165, 229, 271, 328, 343, 406, 428 |
| CviQI | GTAC | 1 cut(s) | 280 |
| DpnI | GATC | 1 cut(s) | 321 |
| DpnII | GATC | 1 cut(s) | 319 |
| EaeI | YGGCCR | 1 cut(s) | 142 |
| Eco24I | GRGCYC | 2 cut(s) | 330, 345 |
| Eco57I | CTGAAG | 1 cut(s) | 212 |
| Eco88I | CYCGRG | 3 cut(s) | 43, 149, 257 |
| EcoT38I | GRGCYC | 2 cut(s) | 330, 345 |
| FaeI | CATG | 4 cut(s) | 25, 251, 352, 453 |
| FaiI | YATR | 7 cut(s) | 23, 224, 249, 338, 350, 372, 451 |
| FaqI | GGGAC | 1 cut(s) | 392 |
| FatI | CATG | 4 cut(s) | 21, 247, 348, 449 |
| Fnu4HI | GCNGC | 3 cut(s) | 142, 180, 230 |
| FriOI | GRGCYC | 2 cut(s) | 330, 345 |
| Fsp4HI | GCNGC | 3 cut(s) | 142, 180, 230 |
| FspBI | CTAG | 1 cut(s) | 138 |
| GluI | GCNGC | 3 cut(s) | 142, 180, 230 |
| HaeIII | GGCC | 3 cut(s) | 41, 144, 406 |
| HgaI | GACGC | 1 cut(s) | 105 |
| Hin1I | GRCGYC | 1 cut(s) | 97 |
| Hin1II | CATG | 4 cut(s) | 25, 251, 352, 453 |
| HinfI | GANTC | 1 cut(s) | 119 |
| HphI | GGTGA | 1 cut(s) | 170 |
| Hpy188III | TCNNGA | 2 cut(s) | 217, 323 |
| Hpy99I | CGWCG | 1 cut(s) | 105 |
| HpyAV | CCTTC | 5 cut(s) | 76, 143, 187, 409, 451 |
| HpyCH4III | ACNGT | 1 cut(s) | 238 |
| HpyCH4IV | ACGT | 1 cut(s) | 282 |
| HpyCH4V | TGCA | 2 cut(s) | 179, 424 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 308, 425 |
| HpySE526I | ACGT | 1 cut(s) | 282 |
| Hsp92I | GRCGYC | 1 cut(s) | 97 |
| Hsp92II | CATG | 4 cut(s) | 25, 251, 352, 453 |
| Kzo9I | GATC | 1 cut(s) | 319 |
| LmnI | GCTCC | 1 cut(s) | 340 |
| LpnPI | CCDG | 6 cut(s) | 80, 290, 310, 344, 410, 414 |
| Lsp1109I | GCAGC | 2 cut(s) | 191, 216 |
| MaeI | CTAG | 1 cut(s) | 138 |
| MaeII | ACGT | 1 cut(s) | 282 |
| MaeIII | GTNAC | 2 cut(s) | 238, 292 |
| MalI | GATC | 1 cut(s) | 321 |
| MboI | GATC | 1 cut(s) | 319 |
| MboII | GAAGA | 4 cut(s) | 91, 209, 329, 377 |
| MhlI | GDGCHC | 2 cut(s) | 330, 345 |
| MlyI | GAGTC | 1 cut(s) | 113 |
| MnlI | CCTC | 5 cut(s) | 118, 158, 163, 253, 266 |
| MseI | TTAA | 1 cut(s) | 435 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 308, 425 |
| NdeII | GATC | 1 cut(s) | 319 |
| NlaIII | CATG | 4 cut(s) | 25, 251, 352, 453 |
| NlaIV | GGNNCC | 2 cut(s) | 42, 342 |
| NmuCI | GTSAC | 2 cut(s) | 238, 292 |
| NspI | RCATGY | 2 cut(s) | 25, 352 |
| PaeR7I | CTCGAG | 2 cut(s) | 149, 257 |
| PciI | ACATGT | 1 cut(s) | 348 |
| PflFI | GACNNNGTC | 1 cut(s) | 99 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 283, 337 |
| PkrI | GCNGC | 3 cut(s) | 143, 181, 231 |
| PleI | GAGTC | 1 cut(s) | 113 |
| PpsI | GAGTC | 1 cut(s) | 113 |
| Ppu21I | YACGTR | 1 cut(s) | 283 |
| PscI | ACATGT | 1 cut(s) | 348 |
| PspN4I | GGNNCC | 2 cut(s) | 42, 342 |
| PspPI | GGNCC | 1 cut(s) | 40 |
| PspXI | VCTCGAGB | 2 cut(s) | 149, 257 |
| PsyI | GACNNNGTC | 1 cut(s) | 99 |
| RsaI | GTAC | 1 cut(s) | 281 |
| RsaNI | GTAC | 1 cut(s) | 280 |
| SaqAI | TTAA | 1 cut(s) | 435 |
| SatI | GCNGC | 3 cut(s) | 142, 180, 230 |
| Sau3AI | GATC | 1 cut(s) | 319 |
| Sau96I | GGNCC | 1 cut(s) | 40 |
| SchI | GAGTC | 1 cut(s) | 113 |
| SduI | GDGCHC | 2 cut(s) | 330, 345 |
| SetI | ASST | 5 cut(s) | 87, 150, 167, 231, 285 |
| Sfr274I | CTCGAG | 2 cut(s) | 149, 257 |
| SlaI | CTCGAG | 2 cut(s) | 149, 257 |
| SmlI | CTYRAG | 2 cut(s) | 149, 257 |
| SmoI | CTYRAG | 2 cut(s) | 149, 257 |
| SsiI | CCGC | 2 cut(s) | 141, 419 |
| SspMI | CTAG | 1 cut(s) | 138 |
| TaaI | ACNGT | 1 cut(s) | 238 |
| TaiI | ACGT | 1 cut(s) | 285 |
| TaqI | TCGA | 2 cut(s) | 150, 258 |
| TauI | GCSGC | 1 cut(s) | 144 |
| Tru1I | TTAA | 1 cut(s) | 435 |
| Tru9I | TTAA | 1 cut(s) | 435 |
| TscAI | CASTG | 1 cut(s) | 309 |
| TseFI | GTSAC | 2 cut(s) | 238, 292 |
| TseI | GCWGC | 2 cut(s) | 179, 229 |
| Tsp45I | GTSAC | 2 cut(s) | 238, 292 |
| TspDTI | ATGAA | 1 cut(s) | 330 |
| TspGWI | ACGGA | 1 cut(s) | 434 |
| TspRI | CASTG | 1 cut(s) | 309 |
| Tth111I | GACNNNGTC | 1 cut(s) | 99 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 283, 337 |
| XceI | RCATGY | 2 cut(s) | 25, 352 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 152, 304 |
| XhoI | CTCGAG | 2 cut(s) | 149, 257 |
| XspI | CTAG | 1 cut(s) | 138 |