Nudix hydrolase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NUDIX | PF00293 | 18 - 141 | 4.5e-18 | NUDIX domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 43, 102 |
| AccBSI | CCGCTC | 1 cut(s) | 108 |
| AciI | CCGC | 1 cut(s) | 106 |
| AcyI | GRCGYC | 2 cut(s) | 32, 103 |
| AfaI | GTAC | 1 cut(s) | 468 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 141, 142 |
| AgsI | TTSAA | 3 cut(s) | 23, 458, 521 |
| AjnI | CCWGG | 1 cut(s) | 139 |
| AluBI | AGCT | 4 cut(s) | 26, 168, 564, 582 |
| AluI | AGCT | 4 cut(s) | 26, 168, 564, 582 |
| Alw26I | GTCTC | 1 cut(s) | 5 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 235 |
| Ama87I | CYCGRG | 1 cut(s) | 152 |
| ApeKI | GCWGC | 1 cut(s) | 26 |
| AspLEI | GCGC | 1 cut(s) | 105 |
| AsuC2I | CCSGG | 1 cut(s) | 36 |
| AsuHPI | GGTGA | 2 cut(s) | 173, 301 |
| AvaI | CYCGRG | 1 cut(s) | 152 |
| BaeGI | GKGCMC | 1 cut(s) | 48 |
| BanI | GGYRCC | 2 cut(s) | 43, 102 |
| BbvI | GCAGC | 1 cut(s) | 13 |
| BccI | CCATC | 1 cut(s) | 350 |
| BceAI | ACGGC | 1 cut(s) | 116 |
| BciT130I | CCWGG | 1 cut(s) | 141 |
| BclI | TGATCA | 1 cut(s) | 489 |
| BcnI | CCSGG | 1 cut(s) | 36 |
| BcoDI | GTCTC | 1 cut(s) | 5 |
| BfoI | RGCGCY | 1 cut(s) | 106 |
| BisI | GCNGC | 2 cut(s) | 27, 106 |
| BlsI | GCNGC | 2 cut(s) | 28, 107 |
| Bme1390I | CCNGG | 2 cut(s) | 36, 141 |
| BmeT110I | CYCGRG | 1 cut(s) | 152 |
| BmiI | GGNNCC | 3 cut(s) | 45, 104, 124 |
| BmrFI | CCNGG | 2 cut(s) | 36, 141 |
| BpuMI | CCSGG | 1 cut(s) | 36 |
| BsaBI | GATNNNNATC | 1 cut(s) | 296 |
| BsaHI | GRCGYC | 2 cut(s) | 32, 103 |
| BsaJI | CCNNGG | 2 cut(s) | 140, 407 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 141, 142 |
| Bse1I | ACTGG | 1 cut(s) | 211 |
| Bse8I | GATNNNNATC | 1 cut(s) | 296 |
| BseBI | CCWGG | 1 cut(s) | 141 |
| BseDI | CCNNGG | 2 cut(s) | 140, 407 |
| BseJI | GATNNNNATC | 1 cut(s) | 296 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 141, 142 |
| BseMII | CTCAG | 1 cut(s) | 344 |
| BseNI | ACTGG | 1 cut(s) | 211 |
| BseRI | GAGGAG | 1 cut(s) | 188 |
| BseSI | GKGCMC | 1 cut(s) | 48 |
| BseXI | GCAGC | 1 cut(s) | 13 |
| BshNI | GGYRCC | 2 cut(s) | 43, 102 |
| BsiHKCI | CYCGRG | 1 cut(s) | 152 |
| BsiSI | CCGG | 1 cut(s) | 35 |
| BslFI | GGGAC | 2 cut(s) | 111, 159 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 141, 142 |
| BsmAI | GTCTC | 1 cut(s) | 5 |
| BsmBI | CGTCTC | 1 cut(s) | 5 |
| BsmFI | GGGAC | 2 cut(s) | 111, 159 |
| BsoBI | CYCGRG | 1 cut(s) | 152 |
| Bsp1286I | GDGCHC | 1 cut(s) | 48 |
| Bsp143I | GATC | 2 cut(s) | 316, 489 |
| BspACI | CCGC | 1 cut(s) | 106 |
| BspCNI | CTCAG | 1 cut(s) | 343 |
| BspLI | GGNNCC | 3 cut(s) | 45, 104, 124 |
| BspT107I | GGYRCC | 2 cut(s) | 43, 102 |
| BsrBI | CCGCTC | 1 cut(s) | 108 |
| BsrI | ACTGG | 1 cut(s) | 211 |
| BssECI | CCNNGG | 2 cut(s) | 140, 407 |
| BssMI | GATC | 2 cut(s) | 316, 489 |
| BssNI | GRCGYC | 2 cut(s) | 32, 103 |
| BssT1I | CCWWGG | 1 cut(s) | 407 |
| Bst2UI | CCWGG | 1 cut(s) | 141 |
| Bst4CI | ACNGT | 3 cut(s) | 16, 231, 241 |
| BstACI | GRCGYC | 2 cut(s) | 32, 103 |
| BstDEI | CTNAG | 2 cut(s) | 259, 330 |
| BstH2I | RGCGCY | 1 cut(s) | 106 |
| BstHHI | GCGC | 1 cut(s) | 105 |
| BstKTI | GATC | 2 cut(s) | 319, 492 |
| BstMAI | GTCTC | 1 cut(s) | 5 |
| BstMBI | GATC | 2 cut(s) | 316, 489 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 311, 424 |
| BstNI | CCWGG | 1 cut(s) | 141 |
| BstSCI | CCNGG | 2 cut(s) | 34, 139 |
| BstSLI | GKGCMC | 1 cut(s) | 48 |
| BstV1I | GCAGC | 1 cut(s) | 13 |
| CaiI | CAGNNNCTG | 1 cut(s) | 235 |
| CfoI | GCGC | 1 cut(s) | 105 |
| CseI | GACGC | 1 cut(s) | 40 |
| Csp6I | GTAC | 1 cut(s) | 467 |
| CviQI | GTAC | 1 cut(s) | 467 |
| DdeI | CTNAG | 2 cut(s) | 259, 330 |
| DinI | GGCGCC | 1 cut(s) | 104 |
| DpnI | GATC | 2 cut(s) | 318, 491 |
| DpnII | GATC | 2 cut(s) | 316, 489 |
| Eco130I | CCWWGG | 1 cut(s) | 407 |
| Eco88I | CYCGRG | 1 cut(s) | 152 |
| EcoRII | CCWGG | 1 cut(s) | 139 |
| EcoT14I | CCWWGG | 1 cut(s) | 407 |
| EgeI | GGCGCC | 1 cut(s) | 104 |
| EheI | GGCGCC | 1 cut(s) | 104 |
| ErhI | CCWWGG | 1 cut(s) | 407 |
| Esp3I | CGTCTC | 1 cut(s) | 5 |
| FaiI | YATR | 7 cut(s) | 277, 285, 372, 463, 465, 473, 475 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 382, 414, 553, 585 |
| FaqI | GGGAC | 2 cut(s) | 111, 159 |
| FbaI | TGATCA | 1 cut(s) | 489 |
| Fnu4HI | GCNGC | 2 cut(s) | 27, 106 |
| Fsp4HI | GCNGC | 2 cut(s) | 27, 106 |
| GlaI | GCGC | 1 cut(s) | 104 |
| GluI | GCNGC | 2 cut(s) | 27, 106 |
| HaeII | RGCGCY | 1 cut(s) | 106 |
| HapII | CCGG | 1 cut(s) | 35 |
| HgaI | GACGC | 1 cut(s) | 40 |
| HhaI | GCGC | 1 cut(s) | 105 |
| Hin1I | GRCGYC | 2 cut(s) | 32, 103 |
| Hin6I | GCGC | 1 cut(s) | 103 |
| HinP1I | GCGC | 1 cut(s) | 103 |
| HincII | GTYRAC | 1 cut(s) | 7 |
| HindII | GTYRAC | 1 cut(s) | 7 |
| HindIII | AAGCTT | 2 cut(s) | 562, 580 |
| HpaII | CCGG | 1 cut(s) | 35 |
| HphI | GGTGA | 2 cut(s) | 173, 301 |
| Hpy166II | GTNNAC | 1 cut(s) | 7 |
| Hpy188I | TCNGA | 3 cut(s) | 237, 302, 333 |
| Hpy188III | TCNNGA | 1 cut(s) | 518 |
| Hpy8I | GTNNAC | 1 cut(s) | 7 |
| Hpy99I | CGWCG | 1 cut(s) | 34 |
| HpyAV | CCTTC | 2 cut(s) | 146, 190 |
| HpyCH4III | ACNGT | 3 cut(s) | 16, 231, 241 |
| HpyCH4V | TGCA | 1 cut(s) | 182 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 311, 424 |
| HpyF3I | CTNAG | 2 cut(s) | 259, 330 |
| Hsp92I | GRCGYC | 2 cut(s) | 32, 103 |
| HspAI | GCGC | 1 cut(s) | 103 |
| KasI | GGCGCC | 1 cut(s) | 102 |
| Ksp22I | TGATCA | 1 cut(s) | 489 |
| Kzo9I | GATC | 2 cut(s) | 316, 489 |
| LpnPI | CCDG | 8 cut(s) | 48, 126, 153, 192, 357, 409, 413, 509 |
| Lsp1109I | GCAGC | 1 cut(s) | 13 |
| MaeIII | GTNAC | 2 cut(s) | 225, 241 |
| MalI | GATC | 2 cut(s) | 318, 491 |
| MbiI | CCGCTC | 1 cut(s) | 108 |
| MboI | GATC | 2 cut(s) | 316, 489 |
| MboII | GAAGA | 2 cut(s) | 212, 446 |
| MhlI | GDGCHC | 1 cut(s) | 48 |
| MluCI | AATT | 2 cut(s) | 419, 554 |
| Mly113I | GGCGCC | 1 cut(s) | 103 |
| MnlI | CCTC | 4 cut(s) | 71, 161, 166, 339 |
| MseI | TTAA | 4 cut(s) | 434, 450, 533, 578 |
| MspI | CCGG | 1 cut(s) | 35 |
| MspR9I | CCNGG | 2 cut(s) | 36, 141 |
| MvaI | CCWGG | 1 cut(s) | 141 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 311, 424 |
| NarI | GGCGCC | 1 cut(s) | 103 |
| NciI | CCSGG | 1 cut(s) | 36 |
| NdeII | GATC | 2 cut(s) | 316, 489 |
| NlaIV | GGNNCC | 3 cut(s) | 45, 104, 124 |
| NmuCI | GTSAC | 1 cut(s) | 241 |
| PaeR7I | CTCGAG | 1 cut(s) | 152 |
| PkrI | GCNGC | 2 cut(s) | 28, 107 |
| PluTI | GGCGCC | 1 cut(s) | 106 |
| Psp6I | CCWGG | 1 cut(s) | 139 |
| PspGI | CCWGG | 1 cut(s) | 139 |
| PspN4I | GGNNCC | 3 cut(s) | 45, 104, 124 |
| PspXI | VCTCGAGB | 1 cut(s) | 152 |
| PstNI | CAGNNNCTG | 1 cut(s) | 235 |
| RsaI | GTAC | 1 cut(s) | 468 |
| RsaNI | GTAC | 1 cut(s) | 467 |
| SaqAI | TTAA | 4 cut(s) | 434, 450, 533, 578 |
| SatI | GCNGC | 2 cut(s) | 27, 106 |
| Sau3AI | GATC | 2 cut(s) | 316, 489 |
| ScrFI | CCNGG | 2 cut(s) | 36, 141 |
| SduI | GDGCHC | 1 cut(s) | 48 |
| SfoI | GGCGCC | 1 cut(s) | 104 |
| Sfr274I | CTCGAG | 1 cut(s) | 152 |
| SlaI | CTCGAG | 1 cut(s) | 152 |
| SmlI | CTYRAG | 1 cut(s) | 152 |
| SmoI | CTYRAG | 1 cut(s) | 152 |
| Sse9I | AATT | 2 cut(s) | 419, 554 |
| SsiI | CCGC | 1 cut(s) | 106 |
| SspDI | GGCGCC | 1 cut(s) | 102 |
| SspI | AATATT | 1 cut(s) | 337 |
| StyD4I | CCNGG | 2 cut(s) | 34, 139 |
| StyI | CCWWGG | 1 cut(s) | 407 |
| TaaI | ACNGT | 3 cut(s) | 16, 231, 241 |
| TaqI | TCGA | 1 cut(s) | 153 |
| TasI | AATT | 2 cut(s) | 419, 554 |
| TatI | WGTACW | 1 cut(s) | 466 |
| TauI | GCSGC | 1 cut(s) | 108 |
| Tru1I | TTAA | 4 cut(s) | 434, 450, 533, 578 |
| Tru9I | TTAA | 4 cut(s) | 434, 450, 533, 578 |
| TseFI | GTSAC | 1 cut(s) | 241 |
| TseI | GCWGC | 1 cut(s) | 26 |
| Tsp45I | GTSAC | 1 cut(s) | 241 |
| XhoI | CTCGAG | 1 cut(s) | 152 |