Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0001139

Physical Location & Seq

Genomic Coordinates Forward (+)

12146753 .. 12154119

Gene Structure 7367 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGCATGCCATGGCATCAAGATTGGCACCAATTCTCTTATTACTCCTCTCCATTTTCATCACCTTGTCATCACCAACCTCATGCCATCCTCTAGACCCTCTAACACCATCCGAGTTCATCCATGTCAAAACCGTAGTCCAAAAATCCTACCCTTCACAAAACCTGAGCTTCCAATACGTAGGCCTAGATGAACCCGAAAAGTCCACCGTCCTCTCATGGCAATCAAAACCCACCAAAACCCTGCCTCCTCTTCCTCGCCGTGCCTTGGTCGTTTTACGACTCAAAATGAAAACCCTAGAGCTCATAGTCGACATATCAACCCGTTCCATAGTTTCCAAAACTGAATTTGATAACAAACATGGATACCCTTTGCTTAACATTGAAGAACAATCTGTTGCGGCTGAACTCCCGTTCAAATATAAACCCTTTATCCAGTCCATTAAAAAGAGAGGGCTTAACATGTCCGAAGTTGTGTGTAGTACTTTTTCAGTTGGTTGGTTTGGGGAGGCCAAAACTAAAAGAACAATCAAGATTAATTGCTTTTACAAAAAAGATAGTGTAAACTTGTACGTGAGGCCAGTGGAGGGAATAACAGTCGCGGTTGATCTGGACGAGCTGAAGATCGTTGAATACATCGATAGGTTTGTTGCACCTGTACCAAAAGCCGAGGGAACTGAGTACCGAGCGTCCAATCAGAAGCCTCCATTTGGTCCAAAGCTAAATGGTGCTCCAGTTATGTCGGGGGACAAAGGGTTCAAGCTCGACGGCAACACTGTAAGTGTTTTACTTCATTTCTTGTACACATCTTGTTTAATCATAACCGTCCATTTGATTATTCAATTTAATACCCAGAAATTTATTCCGTTTTACAATTTACTAATATTCATATTTGTAATCATCATCAGGTGGGCCAATTGGATCTTCCATCTCGGATTTGATGTTCGAACGGGTGTGATTATATCTCAAGCATCAATATATGATCTTGAAATGCACGAGTACAGGAGGGTTTTGTACAGAGGCTTTGTATCCGAGCTCTTTGTCCCGTACATGGACCCCACAGAAGAATGGTACTACAAAACCTTCTTCGACTGTGGAGAATTTGGGTTTGGTCTATCCACAGTCTCACTCGAGCCGTTGACCGACTGCCCAGCCAATGCTCAGTTCATGGACGCCTACTATGCTGCCCAGGACGGCACGCCGGTGAAGATATCGAATGCTTATTGCATCTTTGAGAGACATGCAGGCAACATCTTGTGGCGCCACACTGAATTGACCATCCCAGATATAGTGATCACAGAAGTTAGGGCTGAGGTCACTCTGGTTGTGAGGACGGTTTCAACTGTAGGCAACTATGACTACATAATTGATTGGGAGTTCAAGCCAAGTGGCTCCATCAAAATGGAGGTGGGGCTAACAGGTGTGCTAGAAATTGAAGCAGTTAATTACACCCAGATAGACCAAATAGAGGAGGAAGTTTTTGGCACATTGGTGGCAGATAATAGCATTGCTGTGAACCATGATCATTTCTTGACATACCATCTTGACCTTGATGTGGATGGTGAAACCAATTCCTTTGTCAAGAATAATTTTGTGACGAAACAAGCAACCGGCCACAACACACCAAGGAAGAGTTATTGGAATATTGTAAGCGAGACGGCTAAAACTGAGTTAGATGCAAGAATTCGCCTTGGTTTGAAGCCAGCTGACCTGGTTGTGGTAAACCCTATTAAGAAGACCAAAGCCGGGAACCCATTTGGCTATCGTTTGATCCCAGGGGCAGTTGCAGGACCCCTATTGTTAGAGGATGATTACCCGCAAATACGCGGCGCTTTCACTAAGTACAATGTGTGGGTTACACCATACAACAAGTCCGAAAAATGGGCAGGAGGAAGACATGTTGATCAAAGTAGAGGAGAGGACACATTAGATGTGTGGAGCAGCAGGAATAGGAAAATCGAGAACAAGGATATAGTGTTGTGGTACACAATTGGGTTTCACCACAATCCTTGCCAAGAGGATTTTCCAATGATGCCAACATTGAGTGGTGGATTTGAGCTCAGGCCAACCAATTTCTTTGAGAGAAGTCCTGTTCTTAAAGTTAGAACCATACCTTCTAAGCACCACTCGCCTAATTGCACCGCCAAAAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009987 GO:0010035 GO:0016491 GO:0016638 GO:0016641 GO:0042221 GO:0050896 GO:0051716 GO:0052597 GO:0055114 GO:0070887 GO:0071241 GO:0097184 GO:0097185 GO:1901698 GO:1901699

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

717

Amino Acids

81.33

Weight (kDa)

6.84

Isoelectric Point (pI)

42.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu_amine_oxidN2	PF02727	29 - 114	5.5e-14	Copper amine oxidase, N2 domain
Cu_amine_oxidN3	PF02728	124 - 219	5.8e-22	Copper amine oxidase, N3 domain
Cu_amine_oxid	PF01179	301 - 698	1.5e-133	Copper amine oxidase, enzyme domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001139)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31690 AT1G31710
fragaria_vesca	FvH4_2g30510 FvH4_4g15340 FvH4_4g15360 FvH4_4g15380
malus_domestica	MD16G1191900.v1.1 MD16G1192100.v1.1 MD16G1192300.v1.1
prunus_persica	Prupe.1G011900_v2.0.a1 Prupe.1G012000_v2.0.a1
pyrus_communis	pycom16g16160 pycom16g16180 pycom16g16190 pycom16g16200
rosa_chinensis	RchiOBHm_Chr2g0122101 RchiOBHm_Chr4g0416421 RchiOBHm_Chr4g0416431 RchiOBHm_Chr4g0416451 RchiOBHm_Chr4g0416461 RchiOBHm_Chr4g0416501
rosa_laevigata	RLG00000007978 RLG00000007979 RLG00000007982 RLG00000007983
rosa_multiflora	Rmu_co8318835.1_g000001 Rmu_sc0003722.1_g000010 Rmu_sc0003722.1_g000023
rosa_roxburghii	Rroxscaffold_2G00090210 Rroxscaffold_5G00360250 Rroxscaffold_5G00360280 Rroxscaffold_5G00360360 Rroxscaffold_5G00360370
rosa_rugosa	Rorug04G0141800 Rorug04G0141900 Rorug04G0142200
rosa_samantha	Rh4AG204100 Rh4AG204200 Rh4AG204300 Rh4AG204600 Rh4BG201800 Rh4BG202200 Rh4BG202400 Rh4CG215300 Rh4CG215500 Rh4CG215800 Rh4DG201600 Rh4DG201700 Rh4DG201800 Rh5BG514400 Rh5CG538000 Rh5DG526800 Rh7AG414700 Rh7AG415300
rosa_wichuraiana	Rw4G017280 Rw4G017290 Rw4G017310 Rw5G045710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	25, 1257
AccI	GTMKAC	1 cut(s)	309
AccII	CGCG	2 cut(s)	599, 1824
AciI	CCGC	5 cut(s)	398, 599, 1814, 1824, 2139
AclWI	GGATC	2 cut(s)	926, 1762
AcoI	YGGCCR	1 cut(s)	1609
AcsI	RAATTY	4 cut(s)	344, 854, 1097, 1680
AcuI	CTGAAG	1 cut(s)	638
AcyI	GRCGYC	2 cut(s)	1170, 1258
AfiI	CCNNNNNNNGG	9 cut(s)	265, 584, 707, 1048, 1465, 1552, 1714, 1743, 1878
AflIII	ACRYGT	2 cut(s)	459, 1894
AjnI	CCWGG	3 cut(s)	1185, 1707, 1771
AjuI	GAANNNNNNNTTGG	8 cut(s)	905, 937, 1089, 1121, 1145, 1177, 2004, 2036
AleI	CACNNNNGTG	2 cut(s)	1199, 1487
AloI	GAACNNNNNNTCC	4 cut(s)	737, 769, 924, 956
AluBI	AGCT	8 cut(s)	168, 301, 616, 718, 760, 1033, 1703, 2056
AluI	AGCT	8 cut(s)	168, 301, 616, 718, 760, 1033, 1703, 2056
Alw21I	GWGCWC	4 cut(s)	303, 730, 1035, 2058
Alw26I	GTCTC	3 cut(s)	1126, 1228, 1646
AlwI	GGATC	2 cut(s)	926, 1762
Ama87I	CYCGRG	1 cut(s)	1127
AoxI	GGCC	6 cut(s)	181, 507, 575, 909, 1609, 2060
ApeKI	GCWGC	2 cut(s)	1181, 1938
ApoI	RAATTY	4 cut(s)	344, 854, 1097, 1680
ArsI	GACNNNNNNTTYG	2 cut(s)	120, 152
AseI	ATTAAT	1 cut(s)	534
AspLEI	GCGC	2 cut(s)	1260, 1829
AspS9I	GGNCC	4 cut(s)	710, 909, 1051, 1787
AsuC2I	CCSGG	1 cut(s)	1744
AsuHPI	GGTGA	5 cut(s)	52, 63, 1213, 1571, 1988
AsuII	TTCGAA	1 cut(s)	943
AvaI	CYCGRG	1 cut(s)	1127
AvaII	GGWCC	3 cut(s)	710, 1051, 1787
BanI	GGYRCC	2 cut(s)	25, 1257
BanII	GRGCYC	3 cut(s)	303, 1035, 2058
BauI	CACGAG	1 cut(s)	992
BbsI	GAAGAC	2 cut(s)	1739, 1897
Bbv12I	GWGCWC	4 cut(s)	303, 730, 1035, 2058
BbvCI	CCTCAGC	1 cut(s)	1308
BbvI	GCAGC	2 cut(s)	1168, 1950
BccI	CCATC	7 cut(s)	93, 115, 933, 1283, 1400, 1545, 1550
BceAI	ACGGC	5 cut(s)	243, 781, 1117, 1207, 1671
BciT130I	CCWGG	3 cut(s)	1187, 1709, 1773
BciVI	GTATCC	2 cut(s)	356, 1036
BclI	TGATCA	3 cut(s)	1290, 1519, 1900
BcnI	CCSGG	1 cut(s)	1744
BcoDI	GTCTC	3 cut(s)	1126, 1228, 1646
BfaI	CTAG	5 cut(s)	92, 185, 296, 1424, 2149
BfmI	CTRYAG	1 cut(s)	1341
BfoI	RGCGCY	2 cut(s)	1261, 1830
BfuI	GTATCC	2 cut(s)	356, 1036
BisI	GCNGC	4 cut(s)	399, 1182, 1825, 1939
BlsI	GCNGC	4 cut(s)	400, 1183, 1826, 1940
BmcAI	AGTACT	1 cut(s)	481
Bme1390I	CCNGG	4 cut(s)	1187, 1709, 1744, 1773
Bme18I	GGWCC	3 cut(s)	710, 1051, 1787
BmeT110I	CYCGRG	1 cut(s)	1127
BmgT120I	GGNCC	4 cut(s)	710, 909, 1051, 1787
BmiI	GGNNCC	6 cut(s)	27, 1053, 1259, 1390, 1748, 1789
BmrFI	CCNGG	4 cut(s)	1187, 1709, 1744, 1773
BmsI	GCATC	5 cut(s)	23, 977, 1233, 1663, 2019
BpiI	GAAGAC	2 cut(s)	1739, 1897
BpmI	CTGGAG	1 cut(s)	714
Bpu10I	CCTNAGC	3 cut(s)	164, 1308, 2057
Bpu14I	TTCGAA	1 cut(s)	943
BpuEI	CTTGAG	1 cut(s)	948
BpuMI	CCSGG	1 cut(s)	1744
Bsa29I	ATCGAT	1 cut(s)	636
BsaAI	YACGTR	2 cut(s)	178, 571
BsaHI	GRCGYC	2 cut(s)	1170, 1258
BsaJI	CCNNGG	8 cut(s)	9, 264, 666, 1185, 1622, 1687, 1771, 1772
BsaXI	ACNNNNNCTCC	2 cut(s)	229, 259
Bsc4I	CCNNNNNNNGG	9 cut(s)	265, 584, 707, 1048, 1465, 1552, 1714, 1743, 1878
Bse118I	RCCGGY	2 cut(s)	1198, 1607
Bse1I	ACTGG	3 cut(s)	433, 578, 731
Bse3DI	GCAATG	1 cut(s)	1503
BseBI	CCWGG	3 cut(s)	1187, 1709, 1773
BseCI	ATCGAT	1 cut(s)	636
BseDI	CCNNGG	8 cut(s)	9, 264, 666, 1185, 1622, 1687, 1771, 1772
BseGI	GGATG	6 cut(s)	85, 107, 117, 1275, 1561, 1810
BseLI	CCNNNNNNNGG	9 cut(s)	265, 584, 707, 1048, 1465, 1552, 1714, 1743, 1878
BseMI	GCAATG	1 cut(s)	1503
BseMII	CTCAG	6 cut(s)	155, 666, 1172, 1299, 1656, 2071
BseNI	ACTGG	3 cut(s)	433, 578, 731
BseRI	GAGGAG	4 cut(s)	35, 237, 1481, 1926
BseXI	GCAGC	2 cut(s)	1168, 1950
BseYI	CCCAGC	1 cut(s)	1147
Bsh1236I	CGCG	2 cut(s)	599, 1824
BshFI	GGCC	6 cut(s)	183, 509, 577, 911, 1611, 2062
BshNI	GGYRCC	2 cut(s)	25, 1257
BshVI	ATCGAT	1 cut(s)	636
BsiHKAI	GWGCWC	4 cut(s)	303, 730, 1035, 2058
BsiHKCI	CYCGRG	1 cut(s)	1127
BsiSI	CCGG	3 cut(s)	1199, 1608, 1743
BslFI	GGGAC	2 cut(s)	758, 1025
BslI	CCNNNNNNNGG	9 cut(s)	265, 584, 707, 1048, 1465, 1552, 1714, 1743, 1878
BsmAI	GTCTC	3 cut(s)	1126, 1228, 1646
BsmBI	CGTCTC	1 cut(s)	1646
BsmFI	GGGAC	2 cut(s)	758, 1025
BsmI	GAATGC	1 cut(s)	1219
BsnI	GGCC	6 cut(s)	183, 509, 577, 911, 1611, 2062
BsoBI	CYCGRG	1 cut(s)	1127
Bsp119I	TTCGAA	1 cut(s)	943
Bsp1286I	GDGCHC	4 cut(s)	303, 730, 1035, 2058
Bsp1407I	TGTACA	2 cut(s)	798, 1011
Bsp143I	GATC	8 cut(s)	604, 621, 918, 979, 1290, 1519, 1767, 1900
Bsp19I	CCATGG	1 cut(s)	9
BspACI	CCGC	5 cut(s)	398, 599, 1814, 1824, 2139
BspANI	GGCC	6 cut(s)	183, 509, 577, 911, 1611, 2062
BspCNI	CTCAG	6 cut(s)	156, 667, 1171, 1300, 1657, 2070
BspDI	ATCGAT	1 cut(s)	636
BspFNI	CGCG	2 cut(s)	599, 1824
BspLI	GGNNCC	6 cut(s)	27, 1053, 1259, 1390, 1748, 1789
BspPI	GGATC	2 cut(s)	926, 1762
BspT104I	TTCGAA	1 cut(s)	943
BspT107I	GGYRCC	2 cut(s)	25, 1257
BsrDI	GCAATG	1 cut(s)	1503
BsrFI	RCCGGY	2 cut(s)	1198, 1607
BsrGI	TGTACA	2 cut(s)	798, 1011
BsrI	ACTGG	3 cut(s)	433, 578, 731
BssAI	RCCGGY	2 cut(s)	1198, 1607
BssECI	CCNNGG	8 cut(s)	9, 264, 666, 1185, 1622, 1687, 1771, 1772
BssMI	GATC	8 cut(s)	604, 621, 918, 979, 1290, 1519, 1767, 1900
BssNI	GRCGYC	2 cut(s)	1170, 1258
BssSI	CACGAG	1 cut(s)	992
BssT1I	CCWWGG	4 cut(s)	9, 264, 1622, 1687
Bst2BI	CACGAG	1 cut(s)	992
Bst2UI	CCWGG	3 cut(s)	1187, 1709, 1773
Bst4CI	ACNGT	9 cut(s)	133, 208, 595, 775, 823, 1091, 1120, 1333, 1342
Bst6I	CTCTTC	2 cut(s)	255, 1622
BstACI	GRCGYC	2 cut(s)	1170, 1258
BstAUI	TGTACA	2 cut(s)	798, 1011
BstBAI	YACGTR	2 cut(s)	178, 571
BstBI	TTCGAA	1 cut(s)	943
BstC8I	GCNNGC	4 cut(s)	6, 1196, 1243, 1701
BstDEI	CTNAG	8 cut(s)	164, 675, 1158, 1308, 1665, 1836, 2057, 2115
BstDSI	CCRYGG	1 cut(s)	9
BstF5I	GGATG	6 cut(s)	85, 107, 117, 1275, 1561, 1810
BstFNI	CGCG	2 cut(s)	599, 1824
BstH2I	RGCGCY	2 cut(s)	1261, 1830
BstHHI	GCGC	2 cut(s)	1260, 1829
BstKTI	GATC	8 cut(s)	607, 624, 921, 982, 1293, 1522, 1770, 1903
BstMAI	GTCTC	3 cut(s)	1126, 1228, 1646
BstMBI	GATC	8 cut(s)	604, 621, 918, 979, 1290, 1519, 1767, 1900
BstMWI	GCNNNNNNNGC	2 cut(s)	1178, 2125
BstNI	CCWGG	3 cut(s)	1187, 1709, 1773
BstNSI	RCATGY	4 cut(s)	8, 463, 1241, 1898
BstSCI	CCNGG	4 cut(s)	1185, 1707, 1742, 1771
BstSFI	CTRYAG	1 cut(s)	1341
BstSNI	TACGTA	1 cut(s)	178
BstUI	CGCG	2 cut(s)	599, 1824
BstV1I	GCAGC	2 cut(s)	1168, 1950
BstV2I	GAAGAC	2 cut(s)	1739, 1897
BstX2I	RGATCY	1 cut(s)	918
BstXI	CCANNNNNNTGG	1 cut(s)	1399
BstYI	RGATCY	1 cut(s)	918
Bsu15I	ATCGAT	1 cut(s)	636
BsuI	GTATCC	2 cut(s)	356, 1036
BsuRI	GGCC	6 cut(s)	183, 509, 577, 911, 1611, 2062
BsuTUI	ATCGAT	1 cut(s)	636
BtgI	CCRYGG	1 cut(s)	9
BtsCI	GGATG	6 cut(s)	85, 107, 117, 1275, 1561, 1810
BtsIMutI	CAGTG	3 cut(s)	585, 771, 1263
Cac8I	GCNNGC	4 cut(s)	6, 1196, 1243, 1701
CfoI	GCGC	2 cut(s)	1260, 1829
Cfr10I	RCCGGY	2 cut(s)	1198, 1607
Cfr13I	GGNCC	4 cut(s)	710, 909, 1051, 1787
ClaI	ATCGAT	1 cut(s)	636
CseI	GACGC	2 cut(s)	675, 1178
CsiI	ACCWGGT	1 cut(s)	1707
CspCI	CAANNNNNGTGG	4 cut(s)	1366, 1401, 1988, 2023
DdeI	CTNAG	8 cut(s)	164, 675, 1158, 1308, 1665, 1836, 2057, 2115
DinI	GGCGCC	1 cut(s)	1259
DpnI	GATC	8 cut(s)	606, 623, 920, 981, 1292, 1521, 1769, 1902
DpnII	GATC	8 cut(s)	604, 621, 918, 979, 1290, 1519, 1767, 1900
EaeI	YGGCCR	1 cut(s)	1609
Eam1104I	CTCTTC	2 cut(s)	255, 1622
EarI	CTCTTC	2 cut(s)	255, 1622
Ecl136II	GAGCTC	3 cut(s)	301, 1033, 2056
Eco105I	TACGTA	1 cut(s)	178
Eco130I	CCWWGG	4 cut(s)	9, 264, 1622, 1687
Eco147I	AGGCCT	1 cut(s)	183
Eco24I	GRGCYC	3 cut(s)	303, 1035, 2058
Eco32I	GATATC	1 cut(s)	1209
Eco47I	GGWCC	3 cut(s)	710, 1051, 1787
Eco53kI	GAGCTC	3 cut(s)	301, 1033, 2056
Eco57I	CTGAAG	1 cut(s)	638
Eco88I	CYCGRG	1 cut(s)	1127
EcoICRI	GAGCTC	3 cut(s)	301, 1033, 2056
EcoO109I	RGGNCCY	1 cut(s)	1787
EcoRI	GAATTC	1 cut(s)	1680
EcoRII	CCWGG	3 cut(s)	1185, 1707, 1771
EcoRV	GATATC	1 cut(s)	1209
EcoT14I	CCWWGG	4 cut(s)	9, 264, 1622, 1687
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	3 cut(s)	303, 1035, 2058
EgeI	GGCGCC	1 cut(s)	1259
EheI	GGCGCC	1 cut(s)	1259
ErhI	CCWWGG	4 cut(s)	9, 264, 1622, 1687
Esp3I	CGTCTC	1 cut(s)	1646
FaqI	GGGAC	2 cut(s)	758, 1025
FauI	CCCGC	1 cut(s)	1821
FbaI	TGATCA	3 cut(s)	1290, 1519, 1900
FblI	GTMKAC	1 cut(s)	309
Fnu4HI	GCNGC	4 cut(s)	399, 1182, 1825, 1939
FokI	GGATG	6 cut(s)	72, 94, 104, 1262, 1568, 1817
FriOI	GRGCYC	3 cut(s)	303, 1035, 2058
Fsp4HI	GCNGC	4 cut(s)	399, 1182, 1825, 1939
FspBI	CTAG	5 cut(s)	92, 185, 296, 1424, 2149
GlaI	GCGC	2 cut(s)	1259, 1828
GluI	GCNGC	4 cut(s)	399, 1182, 1825, 1939
GsaI	CCCAGC	1 cut(s)	1151
GsuI	CTGGAG	1 cut(s)	714
HaeII	RGCGCY	2 cut(s)	1261, 1830
HaeIII	GGCC	6 cut(s)	183, 509, 577, 911, 1611, 2062
HapII	CCGG	3 cut(s)	1199, 1608, 1743
HgaI	GACGC	2 cut(s)	675, 1178
HhaI	GCGC	2 cut(s)	1260, 1829
Hin1I	GRCGYC	2 cut(s)	1170, 1258
Hin6I	GCGC	2 cut(s)	1258, 1827
HinP1I	GCGC	2 cut(s)	1258, 1827
HincII	GTYRAC	2 cut(s)	310, 1137
HindII	GTYRAC	2 cut(s)	310, 1137
HinfI	GANTC	1 cut(s)	279
HpaII	CCGG	3 cut(s)	1199, 1608, 1743
HphI	GGTGA	5 cut(s)	52, 63, 1213, 1571, 1988
Hpy166II	GTNNAC	8 cut(s)	204, 310, 562, 801, 1137, 1513, 1720, 1983
Hpy188I	TCNGA	6 cut(s)	112, 466, 696, 932, 1030, 1873
Hpy188III	TCNNGA	9 cut(s)	18, 92, 529, 608, 983, 1528, 1541, 1579, 1957
Hpy8I	GTNNAC	8 cut(s)	204, 310, 562, 801, 1137, 1513, 1720, 1983
Hpy99I	CGWCG	1 cut(s)	767
HpyAV	CCTTC	3 cut(s)	162, 1090, 2121
HpyCH4III	ACNGT	9 cut(s)	133, 208, 595, 775, 823, 1091, 1120, 1333, 1342
HpyCH4IV	ACGT	2 cut(s)	177, 570
HpyCH4V	TGCA	8 cut(s)	4, 650, 991, 1224, 1241, 1676, 1784, 2136
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1178, 2125
HpyF3I	CTNAG	8 cut(s)	164, 675, 1158, 1308, 1665, 1836, 2057, 2115
HpySE526I	ACGT	2 cut(s)	177, 570
Hsp92I	GRCGYC	2 cut(s)	1170, 1258
HspAI	GCGC	2 cut(s)	1258, 1827
KasI	GGCGCC	1 cut(s)	1257
Ksp22I	TGATCA	3 cut(s)	1290, 1519, 1900
Kzo9I	GATC	8 cut(s)	604, 621, 918, 979, 1290, 1519, 1767, 1900
LmnI	GCTCC	3 cut(s)	733, 1394, 1935
Lsp1109I	GCAGC	2 cut(s)	1168, 1950
LweI	GCATC	5 cut(s)	23, 977, 1233, 1663, 2019
MabI	ACCWGGT	1 cut(s)	1707
MaeI	CTAG	5 cut(s)	92, 185, 296, 1424, 2149
MaeII	ACGT	2 cut(s)	177, 570
MaeIII	GTNAC	3 cut(s)	1312, 1591, 1852
MalI	GATC	8 cut(s)	606, 623, 920, 981, 1292, 1521, 1769, 1902
MboI	GATC	8 cut(s)	604, 621, 918, 979, 1290, 1519, 1767, 1900
MfeI	CAATTG	2 cut(s)	913, 1986
MflI	RGATCY	1 cut(s)	918
MhlI	GDGCHC	4 cut(s)	303, 730, 1035, 2058
Mly113I	GGCGCC	1 cut(s)	1258
MlyI	GAGTC	1 cut(s)	273
Mph1103I	ATGCAT	1 cut(s)	6
MseI	TTAA	9 cut(s)	375, 441, 456, 534, 812, 843, 1440, 1728, 2094
MslI	CAYNNNNRTG	4 cut(s)	1199, 1397, 1487, 1508
MspA1I	CMGCKG	1 cut(s)	1703
MspI	CCGG	3 cut(s)	1199, 1608, 1743
MspR9I	CCNGG	4 cut(s)	1187, 1709, 1744, 1773
MunI	CAATTG	2 cut(s)	913, 1986
Mva1269I	GAATGC	1 cut(s)	1219
MvaI	CCWGG	3 cut(s)	1187, 1709, 1773
MvnI	CGCG	2 cut(s)	599, 1824
MwoI	GCNNNNNNNGC	2 cut(s)	1178, 2125
NarI	GGCGCC	1 cut(s)	1258
NciI	CCSGG	1 cut(s)	1744
NcoI	CCATGG	1 cut(s)	9
NdeII	GATC	8 cut(s)	604, 621, 918, 979, 1290, 1519, 1767, 1900
NlaIV	GGNNCC	6 cut(s)	27, 1053, 1259, 1390, 1748, 1789
NmeAIII	GCCGAG	1 cut(s)	691
NmuCI	GTSAC	2 cut(s)	1312, 1591
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	4 cut(s)	8, 463, 1241, 1898
NspV	TTCGAA	1 cut(s)	943
OliI	CACNNNNGTG	2 cut(s)	1199, 1487
PaeI	GCATGC	1 cut(s)	8
PaeR7I	CTCGAG	1 cut(s)	1127
PasI	CCCWGGG	1 cut(s)	1772
PceI	AGGCCT	1 cut(s)	183
PciI	ACATGT	2 cut(s)	459, 1894
PctI	GAATGC	1 cut(s)	1219
PkrI	GCNGC	4 cut(s)	400, 1183, 1826, 1940
PleI	GAGTC	1 cut(s)	273
PluTI	GGCGCC	1 cut(s)	1261
PpsI	GAGTC	1 cut(s)	273
Ppu21I	YACGTR	2 cut(s)	178, 571
PpuMI	RGGWCCY	1 cut(s)	1787
PscI	ACATGT	2 cut(s)	459, 1894
PshBI	ATTAAT	1 cut(s)	534
Psp124BI	GAGCTC	3 cut(s)	303, 1035, 2058
Psp5II	RGGWCCY	1 cut(s)	1787
Psp6I	CCWGG	3 cut(s)	1185, 1707, 1771
PspFI	CCCAGC	1 cut(s)	1147
PspGI	CCWGG	3 cut(s)	1185, 1707, 1771
PspN4I	GGNNCC	6 cut(s)	27, 1053, 1259, 1390, 1748, 1789
PspPI	GGNCC	4 cut(s)	710, 909, 1051, 1787
PspPPI	RGGWCCY	1 cut(s)	1787
PspXI	VCTCGAGB	1 cut(s)	1127
PsuI	RGATCY	1 cut(s)	918
PvuII	CAGCTG	1 cut(s)	1703
RseI	CAYNNNNRTG	4 cut(s)	1199, 1397, 1487, 1508
SacI	GAGCTC	3 cut(s)	303, 1035, 2058
SalI	GTCGAC	1 cut(s)	308
SaqAI	TTAA	9 cut(s)	375, 441, 456, 534, 812, 843, 1440, 1728, 2094
SatI	GCNGC	4 cut(s)	399, 1182, 1825, 1939
Sau3AI	GATC	8 cut(s)	604, 621, 918, 979, 1290, 1519, 1767, 1900
Sau96I	GGNCC	4 cut(s)	710, 909, 1051, 1787
ScaI	AGTACT	1 cut(s)	481
SchI	GAGTC	1 cut(s)	273
ScrFI	CCNGG	4 cut(s)	1187, 1709, 1744, 1773
SduI	GDGCHC	4 cut(s)	303, 730, 1035, 2058
SexAI	ACCWGGT	1 cut(s)	1707
SfaNI	GCATC	5 cut(s)	23, 977, 1233, 1663, 2019
SfcI	CTRYAG	1 cut(s)	1341
SfoI	GGCGCC	1 cut(s)	1259
Sfr274I	CTCGAG	1 cut(s)	1127
SfuI	TTCGAA	1 cut(s)	943
SgrAI	CRCCGGYG	1 cut(s)	1198
SinI	GGWCC	3 cut(s)	710, 1051, 1787
SlaI	CTCGAG	1 cut(s)	1127
SmiMI	CAYNNNNRTG	4 cut(s)	1199, 1397, 1487, 1508
SmlI	CTYRAG	2 cut(s)	963, 1127
SmoI	CTYRAG	2 cut(s)	963, 1127
SnaBI	TACGTA	1 cut(s)	178
SphI	GCATGC	1 cut(s)	8
SseBI	AGGCCT	1 cut(s)	183
SsiI	CCGC	5 cut(s)	398, 599, 1814, 1824, 2139
SspDI	GGCGCC	1 cut(s)	1257
SspI	AATATT	2 cut(s)	882, 1642
SspMI	CTAG	5 cut(s)	92, 185, 296, 1424, 2149
SstI	GAGCTC	3 cut(s)	303, 1035, 2058
StuI	AGGCCT	1 cut(s)	183
StyD4I	CCNGG	4 cut(s)	1185, 1707, 1742, 1771
StyI	CCWWGG	4 cut(s)	9, 264, 1622, 1687
TaaI	ACNGT	9 cut(s)	133, 208, 595, 775, 823, 1091, 1120, 1333, 1342
TaiI	ACGT	2 cut(s)	180, 573
TaqI	TCGA	8 cut(s)	309, 636, 762, 943, 1086, 1128, 1211, 1956
TaqII	GACCGA	1 cut(s)	1154
TatI	WGTACW	5 cut(s)	479, 798, 996, 1011, 1839
TauI	GCSGC	2 cut(s)	401, 1827
Tru1I	TTAA	9 cut(s)	375, 441, 456, 534, 812, 843, 1440, 1728, 2094
Tru9I	TTAA	9 cut(s)	375, 441, 456, 534, 812, 843, 1440, 1728, 2094
TscAI	CASTG	3 cut(s)	585, 778, 1270
TseFI	GTSAC	2 cut(s)	1312, 1591
TseI	GCWGC	2 cut(s)	1181, 1938
Tsp45I	GTSAC	2 cut(s)	1312, 1591
TspDTI	ATGAA	7 cut(s)	46, 106, 204, 302, 779, 874, 1153
TspGWI	ACGGA	1 cut(s)	852
TspRI	CASTG	3 cut(s)	585, 778, 1270
VpaK11BI	GGWCC	3 cut(s)	710, 1051, 1787
VspI	ATTAAT	1 cut(s)	534
XapI	RAATTY	4 cut(s)	344, 854, 1097, 1680
XbaI	TCTAGA	1 cut(s)	91
XceI	RCATGY	4 cut(s)	8, 463, 1241, 1898
XhoI	CTCGAG	1 cut(s)	1127
XmiI	GTMKAC	1 cut(s)	309
XspI	CTAG	5 cut(s)	92, 185, 296, 1424, 2149
ZrmI	AGTACT	1 cut(s)	481
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.