pycom16g17380

magnesium transporter

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
13538514 .. 13542763
4250 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1179 bp
ATGGCTCGAGAGGGGGAAATGGTGCCGGTGGACCAACAGTCGGCGGTGGCGGTGAAGAAGAAGTCCTCTCGGAGTTGGGTTTTATTGGACTGTACTGGAAAGGCTACAGTCTTGGACGTGGATAAGTATGCCATCATGCACAGAGTTCACATTCACGCTCGCGATCTTCGCATTGTCGACCCTTTGCTCTCTTACCCTTCCACCATTCTCGGCCGTGACAGGGCCATAGTTCTCAATTTGGAGCATATTAAAGCAATAATCACCGCTGAAGAGGTGCTACTTCGGGATCCATTGGATGAAAACGTTATTCCGGTTGTTGAAGAGCTTCAAAGACGGTTGCCTCCTGTTAATGCCAATTGTGAAAGTCAAACAGATGGGAAAGAGTTCCCTGCTGGGCAAAATGATATTGAGGCGGGTGATGAAGATGAGTCTCCATTTGAGTTCCGGGCCTTGGAGGTAGCTTTGGAAGCAATTTGTAGTTTTCTTGCTGTACGTACGACAGAACTTGAGACTGCTGCTTATCCTGCCTTAGATGAACTTACTTCTAAGATTAGCAGCCGCAATTTGGATAGGGTTCGTAAATTGAAGAGTGGAATGACGAGGATGACTGCTCGGGTACAAAAGGTGAGGGATGAGCTTGAGCAGCTGCTGGACGATGACGATGATATGGCTGACCTTTACTTATCAAGAAAGCTGGCTGGTGCATCTTCACCAGTTAGTGACTCTGGTCCTGCGAATTGGTATCCTACCTCCCCTACCATAGGCTCAAAAATATCGCGTGCAAGTAGAGCAAGTATGATCACTGTTCATGGAGATGAGAATGACGTTGAGGAACTTGAAATGTTACTTGAGGCTTATTTTATGCAGATTGATGGCACCTTGAACAAATTAGCCACGCTGCGTGAATATATTGATGATACAGAGGATTACATTAATATACAGCTCGATAACCACAGGAATCAGCTGATTCAGCTTGAGCTTTTTCTTAGTTCCGGGACTGTATGCGTCTCCATGTTTTCATTGGTGGCTGGAATTTTTGGCATGAATATTCCATATACGTGGAATGACGGTTATGGATACATGTTCAAATGGGTTTGCATTGTCACGGGAATTTTCTGTGCTGTTGTCTTCGTATTAGTCATATCATATGCTCGCTACAAGGGTCTGGTAGGATCTTGA

Protein Analysis

393

Amino Acids

43.84

Weight (kDa)

4.77

Isoelectric Point (pI)

40.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MRS2-like PF22099 34 - 233 7.1e-27 Magnesium transporter MRS2-like
MRS2-like PF22099 272 - 319 7e-08 Magnesium transporter MRS2-like
CorA PF01544 279 - 380 3.7e-09 CorA-like Mg2+ transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 22, 875
AccI GTMKAC 1 cut(s) 177
AccII CGCG 2 cut(s) 162, 778
AciI CCGC 5 cut(s) 44, 50, 264, 413, 559
AclI AACGTT 1 cut(s) 303
AclWI GGATC 2 cut(s) 281, 294
AcoI YGGCCR 1 cut(s) 211
AcsI RAATTY 2 cut(s) 1032, 1110
AcuI CTGAAG 1 cut(s) 288
AfaI GTAC 4 cut(s) 94, 492, 496, 618
AfiI CCNNNNNNNGG 5 cut(s) 40, 220, 451, 565, 761
AflIII ACRYGT 1 cut(s) 1080
AgsI TTSAA 6 cut(s) 320, 329, 586, 839, 883, 1087
AhdI GACNNNNNGTC 1 cut(s) 37
AjiI CACGTC 1 cut(s) 118
AluBI AGCT 9 cut(s) 325, 461, 637, 646, 694, 943, 964, 973, 979
AluI AGCT 9 cut(s) 325, 461, 637, 646, 694, 943, 964, 973, 979
Alw26I GTCTC 3 cut(s) 435, 503, 1012
AlwI GGATC 2 cut(s) 281, 294
AlwNI CAGNNNCTG 1 cut(s) 649
Ama87I CYCGRG 2 cut(s) 6, 612
AoxI GGCC 3 cut(s) 211, 222, 447
ApeKI GCWGC 5 cut(s) 515, 555, 643, 646, 898
ApoI RAATTY 2 cut(s) 1032, 1110
AseI ATTAAT 1 cut(s) 933
Asp700I GAANNNNTTC 2 cut(s) 324, 383
AspS9I GGNCC 4 cut(s) 31, 222, 447, 728
AsuC2I CCSGG 2 cut(s) 446, 994
AsuHPI GGTGA 5 cut(s) 64, 253, 428, 637, 702
AvaI CYCGRG 2 cut(s) 6, 612
AvaII GGWCC 2 cut(s) 31, 728
BamHI GGATCC 1 cut(s) 286
BanI GGYRCC 2 cut(s) 22, 875
BarI GAAGNNNNNNTAC 2 cut(s) 261, 293
BbsI GAAGAC 1 cut(s) 1120
BbvI GCAGC 5 cut(s) 502, 567, 633, 655, 885
BccI CCATC 3 cut(s) 140, 368, 866
BceAI ACGGC 1 cut(s) 198
BciVI GTATCC 2 cut(s) 753, 1070
BclI TGATCA 1 cut(s) 798
BcnI CCSGG 2 cut(s) 446, 994
BcoDI GTCTC 3 cut(s) 435, 503, 1012
BfmI CTRYAG 1 cut(s) 105
BfuI GTATCC 2 cut(s) 753, 1070
BisI GCNGC 6 cut(s) 516, 556, 559, 644, 647, 899
BlsI GCNGC 6 cut(s) 517, 557, 560, 645, 648, 900
Bme1390I CCNGG 2 cut(s) 446, 994
Bme18I GGWCC 2 cut(s) 31, 728
BmeRI GACNNNNNGTC 1 cut(s) 37
BmeT110I CYCGRG 2 cut(s) 6, 612
BmgBI CACGTC 1 cut(s) 118
BmgT120I GGNCC 4 cut(s) 31, 222, 447, 728
BmiI GGNNCC 3 cut(s) 24, 288, 877
BmrFI CCNGG 2 cut(s) 446, 994
BmsI GCATC 1 cut(s) 713
BoxI GACNNNNGTC 1 cut(s) 726
BpiI GAAGAC 1 cut(s) 1120
BpuEI CTTGAG 4 cut(s) 527, 659, 869, 995
BpuMI CCSGG 2 cut(s) 446, 994
BsaAI YACGTR 2 cut(s) 494, 1059
BsaJI CCNNGG 1 cut(s) 450
BsaWI WCCGGW 1 cut(s) 310
Bsc4I CCNNNNNNNGG 5 cut(s) 40, 220, 451, 565, 761
Bse118I RCCGGY 1 cut(s) 25
Bse1I ACTGG 2 cut(s) 100, 713
BseDI CCNNGG 1 cut(s) 450
BseGI GGATG 3 cut(s) 301, 609, 637
BseLI CCNNNNNNNGG 5 cut(s) 40, 220, 451, 565, 761
BseNI ACTGG 2 cut(s) 100, 713
BseX3I CGGCCG 1 cut(s) 211
BseXI GCAGC 5 cut(s) 502, 567, 633, 655, 885
BseYI CCCAGC 1 cut(s) 392
Bsh1236I CGCG 2 cut(s) 162, 778
Bsh1285I CGRYCG 1 cut(s) 214
BshFI GGCC 3 cut(s) 213, 224, 449
BshNI GGYRCC 2 cut(s) 22, 875
BsiEI CGRYCG 1 cut(s) 214
BsiHKCI CYCGRG 2 cut(s) 6, 612
BsiSI CCGG 4 cut(s) 26, 311, 445, 993
BsiWI CGTACG 1 cut(s) 494
BslFI GGGAC 1 cut(s) 1009
BslI CCNNNNNNNGG 5 cut(s) 40, 220, 451, 565, 761
BsmAI GTCTC 3 cut(s) 435, 503, 1012
BsmBI CGTCTC 1 cut(s) 1012
BsmFI GGGAC 1 cut(s) 1009
BsnI GGCC 3 cut(s) 213, 224, 449
BsoBI CYCGRG 2 cut(s) 6, 612
Bsp143I GATC 4 cut(s) 163, 286, 798, 1172
Bsp68I TCGCGA 1 cut(s) 162
BspACI CCGC 5 cut(s) 44, 50, 264, 413, 559
BspANI GGCC 3 cut(s) 213, 224, 449
BspFNI CGCG 2 cut(s) 162, 778
BspLI GGNNCC 3 cut(s) 24, 288, 877
BspPI GGATC 2 cut(s) 281, 294
BspQI GCTCTTC 1 cut(s) 315
BspT107I GGYRCC 2 cut(s) 22, 875
BsrFI RCCGGY 1 cut(s) 25
BsrI ACTGG 2 cut(s) 100, 713
BssAI RCCGGY 1 cut(s) 25
BssECI CCNNGG 1 cut(s) 450
BssMI GATC 4 cut(s) 163, 286, 798, 1172
BssT1I CCWWGG 1 cut(s) 450
Bst4CI ACNGT 7 cut(s) 39, 92, 109, 336, 805, 1000, 1070
Bst6I CTCTTC 3 cut(s) 264, 315, 581
BstBAI YACGTR 2 cut(s) 494, 1059
BstC8I GCNNGC 4 cut(s) 160, 696, 780, 1153
BstDEI CTNAG 3 cut(s) 529, 546, 986
BstENI CCTNNNNNAGG 1 cut(s) 759
BstF5I GGATG 3 cut(s) 301, 609, 637
BstFNI CGCG 2 cut(s) 162, 778
BstKTI GATC 4 cut(s) 166, 289, 801, 1175
BstMAI GTCTC 3 cut(s) 435, 503, 1012
BstMBI GATC 4 cut(s) 163, 286, 798, 1172
BstMCI CGRYCG 1 cut(s) 214
BstMWI GCNNNNNNNGC 6 cut(s) 168, 467, 524, 643, 788, 970
BstNSI RCATGY 1 cut(s) 1084
BstPAI GACNNNNGTC 1 cut(s) 726
BstSCI CCNGG 2 cut(s) 444, 992
BstSFI CTRYAG 1 cut(s) 105
BstSNI TACGTA 1 cut(s) 494
BstUI CGCG 2 cut(s) 162, 778
BstV1I GCAGC 5 cut(s) 502, 567, 633, 655, 885
BstV2I GAAGAC 1 cut(s) 1120
BstX2I RGATCY 2 cut(s) 286, 1172
BstXI CCANNNNNNTGG 1 cut(s) 1059
BstYI RGATCY 2 cut(s) 286, 1172
BstZI CGGCCG 1 cut(s) 211
BsuI GTATCC 2 cut(s) 753, 1070
BsuRI GGCC 3 cut(s) 213, 224, 449
BtrI CACGTC 1 cut(s) 118
BtsCI GGATG 3 cut(s) 301, 609, 637
BtsIMutI CAGTG 1 cut(s) 801
BtuMI TCGCGA 1 cut(s) 162
Cac8I GCNNGC 4 cut(s) 160, 696, 780, 1153
CaiI CAGNNNCTG 1 cut(s) 649
Cfr10I RCCGGY 1 cut(s) 25
Cfr13I GGNCC 4 cut(s) 31, 222, 447, 728
CseI GACGC 1 cut(s) 994
Csp6I GTAC 4 cut(s) 93, 491, 495, 617
CviAII CATG 5 cut(s) 136, 809, 1012, 1042, 1081
CviQI GTAC 4 cut(s) 93, 491, 495, 617
DdeI CTNAG 3 cut(s) 529, 546, 986
DpnI GATC 4 cut(s) 165, 288, 800, 1174
DpnII GATC 4 cut(s) 163, 286, 798, 1172
DriI GACNNNNNGTC 1 cut(s) 37
EaeI YGGCCR 1 cut(s) 211
EagI CGGCCG 1 cut(s) 211
Eam1104I CTCTTC 3 cut(s) 264, 315, 581
Eam1105I GACNNNNNGTC 1 cut(s) 37
EarI CTCTTC 3 cut(s) 264, 315, 581
EclXI CGGCCG 1 cut(s) 211
Eco105I TACGTA 1 cut(s) 494
Eco130I CCWWGG 1 cut(s) 450
Eco47I GGWCC 2 cut(s) 31, 728
Eco52I CGGCCG 1 cut(s) 211
Eco57I CTGAAG 1 cut(s) 288
Eco88I CYCGRG 2 cut(s) 6, 612
EcoNI CCTNNNNNAGG 1 cut(s) 759
EcoT14I CCWWGG 1 cut(s) 450
ErhI CCWWGG 1 cut(s) 450
Esp3I CGTCTC 1 cut(s) 1012
FaeI CATG 5 cut(s) 139, 812, 1015, 1045, 1084
FaqI GGGAC 1 cut(s) 1009
FatI CATG 5 cut(s) 135, 808, 1011, 1041, 1080
FauI CCCGC 1 cut(s) 406
FauNDI CATATG 1 cut(s) 1147
FbaI TGATCA 1 cut(s) 798
FblI GTMKAC 1 cut(s) 177
Fnu4HI GCNGC 6 cut(s) 516, 556, 559, 644, 647, 899
FokI GGATG 3 cut(s) 308, 616, 644
Fsp4HI GCNGC 6 cut(s) 516, 556, 559, 644, 647, 899
GluI GCNGC 6 cut(s) 516, 556, 559, 644, 647, 899
GsaI CCCAGC 1 cut(s) 396
HaeIII GGCC 3 cut(s) 213, 224, 449
HapII CCGG 4 cut(s) 26, 311, 445, 993
HgaI GACGC 1 cut(s) 994
Hin1II CATG 5 cut(s) 139, 812, 1015, 1045, 1084
HincII GTYRAC 1 cut(s) 178
HindII GTYRAC 1 cut(s) 178
HinfI GANTC 4 cut(s) 428, 722, 958, 967
HpaII CCGG 4 cut(s) 26, 311, 445, 993
HphI GGTGA 5 cut(s) 64, 253, 428, 637, 702
Hpy166II GTNNAC 3 cut(s) 31, 148, 178
Hpy188I TCNGA 1 cut(s) 72
Hpy188III TCNNGA 5 cut(s) 8, 161, 284, 687, 1176
Hpy8I GTNNAC 3 cut(s) 31, 148, 178
HpyAV CCTTC 1 cut(s) 207
HpyCH4III ACNGT 7 cut(s) 39, 92, 109, 336, 805, 1000, 1070
HpyCH4IV ACGT 5 cut(s) 117, 303, 493, 825, 1058
HpyCH4V TGCA 5 cut(s) 139, 704, 782, 865, 1098
HpyF10VI GCNNNNNNNGC 6 cut(s) 168, 467, 524, 643, 788, 970
HpyF3I CTNAG 3 cut(s) 529, 546, 986
HpySE526I ACGT 5 cut(s) 117, 303, 493, 825, 1058
Hsp92II CATG 5 cut(s) 139, 812, 1015, 1045, 1084
Ksp22I TGATCA 1 cut(s) 798
Kzo9I GATC 4 cut(s) 163, 286, 798, 1172
LguI GCTCTTC 1 cut(s) 315
LmnI GCTCC 1 cut(s) 241
Lsp1109I GCAGC 5 cut(s) 502, 567, 633, 655, 885
LweI GCATC 1 cut(s) 713
MaeII ACGT 5 cut(s) 117, 303, 493, 825, 1058
MaeIII GTNAC 4 cut(s) 215, 719, 843, 1102
MalI GATC 4 cut(s) 165, 288, 800, 1174
MboI GATC 4 cut(s) 163, 286, 798, 1172
MboII GAAGA 9 cut(s) 67, 70, 158, 281, 332, 434, 598, 699, 1120
MfeI CAATTG 1 cut(s) 355
MflI RGATCY 2 cut(s) 286, 1172
MluCI AATT 9 cut(s) 235, 355, 471, 562, 581, 736, 887, 1032, 1110
MlyI GAGTC 2 cut(s) 437, 716
MroXI GAANNNNTTC 2 cut(s) 324, 383
MseI TTAA 3 cut(s) 249, 348, 933
MslI CAYNNNNRTG 2 cut(s) 813, 1057
MspA1I CMGCKG 3 cut(s) 266, 646, 964
MspI CCGG 4 cut(s) 26, 311, 445, 993
MspR9I CCNGG 2 cut(s) 446, 994
MunI CAATTG 1 cut(s) 355
MvnI CGCG 2 cut(s) 162, 778
MwoI GCNNNNNNNGC 6 cut(s) 168, 467, 524, 643, 788, 970
NciI CCSGG 2 cut(s) 446, 994
NdeI CATATG 1 cut(s) 1147
NdeII GATC 4 cut(s) 163, 286, 798, 1172
NlaIII CATG 5 cut(s) 139, 812, 1015, 1045, 1084
NlaIV GGNNCC 3 cut(s) 24, 288, 877
NmeAIII GCCGAG 1 cut(s) 189
NmuCI GTSAC 3 cut(s) 215, 719, 1102
NruI TCGCGA 1 cut(s) 162
NspI RCATGY 1 cut(s) 1084
PaeR7I CTCGAG 1 cut(s) 6
PciI ACATGT 1 cut(s) 1080
PciSI GCTCTTC 1 cut(s) 315
PdmI GAANNNNTTC 2 cut(s) 324, 383
PfeI GAWTC 2 cut(s) 958, 967
Pfl23II CGTACG 1 cut(s) 494
PfoI TCCNGGA 1 cut(s) 992
PkrI GCNGC 6 cut(s) 517, 557, 560, 645, 648, 900
PleI GAGTC 2 cut(s) 436, 716
PpsI GAGTC 2 cut(s) 436, 716
Ppu21I YACGTR 2 cut(s) 494, 1059
PscI ACATGT 1 cut(s) 1080
PshAI GACNNNNGTC 1 cut(s) 726
PshBI ATTAAT 1 cut(s) 933
Psp1406I AACGTT 1 cut(s) 303
PspFI CCCAGC 1 cut(s) 392
PspLI CGTACG 1 cut(s) 494
PspN4I GGNNCC 3 cut(s) 24, 288, 877
PspPI GGNCC 4 cut(s) 31, 222, 447, 728
PstNI CAGNNNCTG 1 cut(s) 649
PsuI RGATCY 2 cut(s) 286, 1172
PvuII CAGCTG 2 cut(s) 646, 964
RruI TCGCGA 1 cut(s) 162
RsaI GTAC 4 cut(s) 94, 492, 496, 618
RsaNI GTAC 4 cut(s) 93, 491, 495, 617
RseI CAYNNNNRTG 2 cut(s) 813, 1057
SalI GTCGAC 1 cut(s) 176
SapI GCTCTTC 1 cut(s) 315
SaqAI TTAA 3 cut(s) 249, 348, 933
SatI GCNGC 6 cut(s) 516, 556, 559, 644, 647, 899
Sau3AI GATC 4 cut(s) 163, 286, 798, 1172
Sau96I GGNCC 4 cut(s) 31, 222, 447, 728
SchI GAGTC 2 cut(s) 437, 716
ScrFI CCNGG 2 cut(s) 446, 994
SfaNI GCATC 1 cut(s) 713
SfcI CTRYAG 1 cut(s) 105
Sfr274I CTCGAG 1 cut(s) 6
SinI GGWCC 2 cut(s) 31, 728
SlaI CTCGAG 1 cut(s) 6
SmiMI CAYNNNNRTG 2 cut(s) 813, 1057
SmlI CTYRAG 5 cut(s) 6, 506, 638, 848, 974
SmoI CTYRAG 5 cut(s) 6, 506, 638, 848, 974
SnaBI TACGTA 1 cut(s) 494
Sse9I AATT 9 cut(s) 235, 355, 471, 562, 581, 736, 887, 1032, 1110
SsiI CCGC 5 cut(s) 44, 50, 264, 413, 559
SspI AATATT 1 cut(s) 1048
StyD4I CCNGG 2 cut(s) 444, 992
StyI CCWWGG 1 cut(s) 450
TaaI ACNGT 7 cut(s) 39, 92, 109, 336, 805, 1000, 1070
TaiI ACGT 5 cut(s) 120, 306, 496, 828, 1061
TaqI TCGA 3 cut(s) 7, 177, 945
TasI AATT 9 cut(s) 235, 355, 471, 562, 581, 736, 887, 1032, 1110
TatI WGTACW 1 cut(s) 92
TauI GCSGC 1 cut(s) 561
TfiI GAWTC 2 cut(s) 958, 967
Tru1I TTAA 3 cut(s) 249, 348, 933
Tru9I TTAA 3 cut(s) 249, 348, 933
TscAI CASTG 1 cut(s) 808
TseFI GTSAC 3 cut(s) 215, 719, 1102
TseI GCWGC 5 cut(s) 515, 555, 643, 646, 898
Tsp45I GTSAC 3 cut(s) 215, 719, 1102
TspDTI ATGAA 6 cut(s) 312, 435, 549, 797, 1008, 1058
TspRI CASTG 1 cut(s) 808
VpaK11BI GGWCC 2 cut(s) 31, 728
VspI ATTAAT 1 cut(s) 933
XagI CCTNNNNNAGG 1 cut(s) 759
XapI RAATTY 2 cut(s) 1032, 1110
XceI RCATGY 1 cut(s) 1084
XcmI CCANNNNNNNNNTGG 1 cut(s) 1018
XhoI CTCGAG 1 cut(s) 6
XmiI GTMKAC 1 cut(s) 177
XmnI GAANNNNTTC 2 cut(s) 324, 383
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.