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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2707 |
| Acc36I | ACCTGC | 2 cut(s) | 71, 538 |
| Acc65I | GGTACC | 1 cut(s) | 1417 |
| AccB1I | GGYRCC | 1 cut(s) | 1417 |
| AccII | CGCG | 1 cut(s) | 783 |
| AccIII | TCCGGA | 1 cut(s) | 1552 |
| AciI | CCGC | 6 cut(s) | 698, 873, 1442, 1532, 1937, 2396 |
| AclI | AACGTT | 1 cut(s) | 2204 |
| AcsI | RAATTY | 8 cut(s) | 84, 234, 292, 933, 1203, 1586, 2250, 2631 |
| AcuI | CTGAAG | 7 cut(s) | 39, 72, 477, 1320, 1599, 2246, 2370 |
| AfaI | GTAC | 5 cut(s) | 199, 337, 922, 1419, 2620 |
| AfeI | AGCGCT | 1 cut(s) | 2347 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1250, 1626 |
| AflII | CTTAAG | 1 cut(s) | 1970 |
| AgeI | ACCGGT | 1 cut(s) | 1420 |
| AhlI | ACTAGT | 1 cut(s) | 1664 |
| AjnI | CCWGG | 4 cut(s) | 849, 1059, 2237, 2547 |
| Alw21I | GWGCWC | 6 cut(s) | 869, 1163, 1902, 2088, 2247, 2567 |
| Alw26I | GTCTC | 8 cut(s) | 125, 971, 1127, 1499, 1862, 2210, 2363, 2669 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 850, 1334, 2548 |
| Ama87I | CYCGRG | 2 cut(s) | 258, 800 |
| Aor13HI | TCCGGA | 1 cut(s) | 1552 |
| Aor51HI | AGCGCT | 1 cut(s) | 2347 |
| AoxI | GGCC | 3 cut(s) | 369, 708, 2406 |
| ApeKI | GCWGC | 5 cut(s) | 323, 611, 911, 2198, 2609 |
| ApoI | RAATTY | 8 cut(s) | 84, 234, 292, 933, 1203, 1586, 2250, 2631 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 534, 566 |
| AsiGI | ACCGGT | 1 cut(s) | 1420 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 723, 933, 1608, 2421, 2631 |
| Asp718I | GGTACC | 1 cut(s) | 1417 |
| AspLEI | GCGC | 1 cut(s) | 2348 |
| AspS9I | GGNCC | 2 cut(s) | 847, 2545 |
| AsuC2I | CCSGG | 2 cut(s) | 1245, 1820 |
| AsuHPI | GGTGA | 3 cut(s) | 1166, 1209, 1952 |
| AsuII | TTCGAA | 2 cut(s) | 1646, 2015 |
| AvaI | CYCGRG | 2 cut(s) | 258, 800 |
| AvaII | GGWCC | 2 cut(s) | 847, 2545 |
| BanI | GGYRCC | 1 cut(s) | 1417 |
| BanII | GRGCYC | 4 cut(s) | 1902, 2088, 2238, 2247 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1107, 1139, 1401, 1433 |
| BbsI | GAAGAC | 4 cut(s) | 411, 798, 1308, 2496 |
| Bbv12I | GWGCWC | 6 cut(s) | 869, 1163, 1902, 2088, 2247, 2567 |
| BbvI | GCAGC | 5 cut(s) | 335, 598, 898, 2185, 2596 |
| BccI | CCATC | 7 cut(s) | 599, 602, 804, 1061, 1720, 2502, 2564 |
| BceAI | ACGGC | 2 cut(s) | 695, 2393 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 312, 346, 1063, 1097 |
| BciT130I | CCWGG | 4 cut(s) | 851, 1061, 2239, 2549 |
| BciVI | GTATCC | 1 cut(s) | 1093 |
| BclI | TGATCA | 1 cut(s) | 568 |
| BcnI | CCSGG | 2 cut(s) | 1245, 1820 |
| BcoDI | GTCTC | 8 cut(s) | 125, 971, 1127, 1499, 1862, 2210, 2363, 2669 |
| BcuI | ACTAGT | 1 cut(s) | 1664 |
| BfaI | CTAG | 6 cut(s) | 587, 1562, 1626, 1665, 2276, 2537 |
| BfoI | RGCGCY | 1 cut(s) | 2349 |
| BfrI | CTTAAG | 1 cut(s) | 1970 |
| BfuAI | ACCTGC | 2 cut(s) | 71, 538 |
| BfuI | GTATCC | 1 cut(s) | 1093 |
| BisI | GCNGC | 5 cut(s) | 324, 612, 912, 2199, 2610 |
| BlsI | GCNGC | 5 cut(s) | 325, 613, 913, 2200, 2611 |
| Bme1390I | CCNGG | 6 cut(s) | 851, 1061, 1245, 1820, 2239, 2549 |
| Bme18I | GGWCC | 2 cut(s) | 847, 2545 |
| BmeT110I | CYCGRG | 2 cut(s) | 258, 800 |
| BmgT120I | GGNCC | 2 cut(s) | 847, 2545 |
| BmiI | GGNNCC | 4 cut(s) | 526, 1419, 1551, 2265 |
| BmrFI | CCNGG | 6 cut(s) | 851, 1061, 1245, 1820, 2239, 2549 |
| BmsI | GCATC | 5 cut(s) | 3, 1924, 1996, 2063, 2269 |
| BpiI | GAAGAC | 4 cut(s) | 411, 798, 1308, 2496 |
| BpmI | CTGGAG | 3 cut(s) | 1167, 1218, 2250 |
| Bpu14I | TTCGAA | 2 cut(s) | 1646, 2015 |
| BpuEI | CTTGAG | 6 cut(s) | 153, 761, 945, 2069, 2459, 2643 |
| BpuMI | CCSGG | 2 cut(s) | 1245, 1820 |
| BsaJI | CCNNGG | 7 cut(s) | 105, 615, 711, 2073, 2237, 2238, 2409 |
| BsaWI | WCCGGW | 4 cut(s) | 1402, 1420, 1552, 1988 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 469, 499, 2178, 2208 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1250, 1626 |
| Bse118I | RCCGGY | 2 cut(s) | 1420, 2167 |
| Bse1I | ACTGG | 4 cut(s) | 372, 874, 1220, 2580 |
| Bse3DI | GCAATG | 3 cut(s) | 913, 1721, 2611 |
| BseAI | TCCGGA | 1 cut(s) | 1552 |
| BseBI | CCWGG | 4 cut(s) | 851, 1061, 2239, 2549 |
| BseDI | CCNNGG | 7 cut(s) | 105, 615, 711, 2073, 2237, 2238, 2409 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1250, 1626 |
| BseMI | GCAATG | 3 cut(s) | 913, 1721, 2611 |
| BseMII | CTCAG | 8 cut(s) | 309, 372, 645, 681, 1722, 1842, 1902, 2490 |
| BseNI | ACTGG | 4 cut(s) | 372, 874, 1220, 2580 |
| BseRI | GAGGAG | 2 cut(s) | 191, 2096 |
| BseXI | GCAGC | 5 cut(s) | 335, 598, 898, 2185, 2596 |
| BsgI | GTGCAG | 3 cut(s) | 49, 1341, 1365 |
| Bsh1236I | CGCG | 1 cut(s) | 783 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2107 |
| BshFI | GGCC | 3 cut(s) | 371, 710, 2408 |
| BshNI | GGYRCC | 1 cut(s) | 1417 |
| BshTI | ACCGGT | 1 cut(s) | 1420 |
| BsiEI | CGRYCG | 1 cut(s) | 2107 |
| BsiHKAI | GWGCWC | 6 cut(s) | 869, 1163, 1902, 2088, 2247, 2567 |
| BsiHKCI | CYCGRG | 2 cut(s) | 258, 800 |
| BsiSI | CCGG | 7 cut(s) | 1244, 1403, 1421, 1553, 1820, 1989, 2168 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1250, 1626 |
| BsmAI | GTCTC | 8 cut(s) | 125, 971, 1127, 1499, 1862, 2210, 2363, 2669 |
| BsmBI | CGTCTC | 1 cut(s) | 2363 |
| BsnI | GGCC | 3 cut(s) | 371, 710, 2408 |
| BsoBI | CYCGRG | 2 cut(s) | 258, 800 |
| Bsp119I | TTCGAA | 2 cut(s) | 1646, 2015 |
| Bsp1286I | GDGCHC | 7 cut(s) | 869, 1163, 1902, 2088, 2238, 2247, 2567 |
| Bsp13I | TCCGGA | 1 cut(s) | 1552 |
| Bsp1407I | TGTACA | 2 cut(s) | 920, 2618 |
| Bsp143I | GATC | 1 cut(s) | 568 |
| Bsp19I | CCATGG | 1 cut(s) | 2073 |
| Bsp68I | TCGCGA | 1 cut(s) | 783 |
| BspACI | CCGC | 6 cut(s) | 698, 873, 1442, 1532, 1937, 2396 |
| BspANI | GGCC | 3 cut(s) | 371, 710, 2408 |
| BspCNI | CTCAG | 8 cut(s) | 310, 371, 644, 682, 1723, 1843, 1903, 2491 |
| BspEI | TCCGGA | 1 cut(s) | 1552 |
| BspFNI | CGCG | 1 cut(s) | 783 |
| BspHI | TCATGA | 1 cut(s) | 571 |
| BspLI | GGNNCC | 4 cut(s) | 526, 1419, 1551, 2265 |
| BspMI | ACCTGC | 2 cut(s) | 71, 538 |
| BspQI | GCTCTTC | 4 cut(s) | 819, 1794, 2226, 2517 |
| BspT104I | TTCGAA | 2 cut(s) | 1646, 2015 |
| BspT107I | GGYRCC | 1 cut(s) | 1417 |
| BspTI | CTTAAG | 1 cut(s) | 1970 |
| BsrDI | GCAATG | 3 cut(s) | 913, 1721, 2611 |
| BsrFI | RCCGGY | 2 cut(s) | 1420, 2167 |
| BsrGI | TGTACA | 2 cut(s) | 920, 2618 |
| BsrI | ACTGG | 4 cut(s) | 372, 874, 1220, 2580 |
| BssAI | RCCGGY | 2 cut(s) | 1420, 2167 |
| BssECI | CCNNGG | 7 cut(s) | 105, 615, 711, 2073, 2237, 2238, 2409 |
| BssMI | GATC | 1 cut(s) | 568 |
| BssT1I | CCWWGG | 3 cut(s) | 105, 615, 2073 |
| Bst2UI | CCWGG | 4 cut(s) | 851, 1061, 2239, 2549 |
| Bst4CI | ACNGT | 7 cut(s) | 244, 664, 968, 1105, 1330, 2108, 2666 |
| BstAFI | CTTAAG | 1 cut(s) | 1970 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2060 |
| BstAUI | TGTACA | 2 cut(s) | 920, 2618 |
| BstBI | TTCGAA | 2 cut(s) | 1646, 2015 |
| BstC8I | GCNNGC | 6 cut(s) | 696, 1027, 1514, 1530, 2169, 2394 |
| BstDSI | CCRYGG | 3 cut(s) | 711, 2073, 2409 |
| BstFNI | CGCG | 1 cut(s) | 783 |
| BstH2I | RGCGCY | 1 cut(s) | 2349 |
| BstHHI | GCGC | 1 cut(s) | 2348 |
| BstKTI | GATC | 1 cut(s) | 571 |
| BstMAI | GTCTC | 8 cut(s) | 125, 971, 1127, 1499, 1862, 2210, 2363, 2669 |
| BstMBI | GATC | 1 cut(s) | 568 |
| BstMCI | CGRYCG | 1 cut(s) | 2107 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 482, 835, 1484, 2060, 2242, 2533 |
| BstNI | CCWGG | 4 cut(s) | 851, 1061, 2239, 2549 |
| BstNSI | RCATGY | 4 cut(s) | 224, 485, 1029, 1532 |
| BstSCI | CCNGG | 6 cut(s) | 849, 1059, 1243, 1818, 2237, 2547 |
| BstUI | CGCG | 1 cut(s) | 783 |
| BstV1I | GCAGC | 5 cut(s) | 335, 598, 898, 2185, 2596 |
| BstV2I | GAAGAC | 4 cut(s) | 411, 798, 1308, 2496 |
| BsuI | GTATCC | 1 cut(s) | 1093 |
| BsuRI | GGCC | 3 cut(s) | 371, 710, 2408 |
| BtgI | CCRYGG | 3 cut(s) | 711, 2073, 2409 |
| BtsI | GCAGTG | 1 cut(s) | 2219 |
| BtuMI | TCGCGA | 1 cut(s) | 783 |
| BveI | ACCTGC | 2 cut(s) | 71, 538 |
| Cac8I | GCNNGC | 6 cut(s) | 696, 1027, 1514, 1530, 2169, 2394 |
| CaiI | CAGNNNCTG | 3 cut(s) | 850, 1334, 2548 |
| CciI | TCATGA | 1 cut(s) | 571 |
| CfoI | GCGC | 1 cut(s) | 2348 |
| Cfr10I | RCCGGY | 2 cut(s) | 1420, 2167 |
| Cfr13I | GGNCC | 2 cut(s) | 847, 2545 |
| Csp6I | GTAC | 5 cut(s) | 198, 336, 921, 1418, 2619 |
| CspAI | ACCGGT | 1 cut(s) | 1420 |
| CviQI | GTAC | 5 cut(s) | 198, 336, 921, 1418, 2619 |
| DpnI | GATC | 1 cut(s) | 570 |
| DpnII | GATC | 1 cut(s) | 568 |
| EciI | GGCGGA | 1 cut(s) | 888 |
| Ecl136II | GAGCTC | 3 cut(s) | 1900, 2086, 2245 |
| Eco130I | CCWWGG | 3 cut(s) | 105, 615, 2073 |
| Eco24I | GRGCYC | 4 cut(s) | 1902, 2088, 2238, 2247 |
| Eco32I | GATATC | 1 cut(s) | 1689 |
| Eco47I | GGWCC | 2 cut(s) | 847, 2545 |
| Eco47III | AGCGCT | 1 cut(s) | 2347 |
| Eco53kI | GAGCTC | 3 cut(s) | 1900, 2086, 2245 |
| Eco57I | CTGAAG | 7 cut(s) | 39, 72, 477, 1320, 1599, 2246, 2370 |
| Eco88I | CYCGRG | 2 cut(s) | 258, 800 |
| EcoICRI | GAGCTC | 3 cut(s) | 1900, 2086, 2245 |
| EcoO109I | RGGNCCY | 2 cut(s) | 847, 2545 |
| EcoRI | GAATTC | 3 cut(s) | 933, 1586, 2631 |
| EcoRII | CCWGG | 4 cut(s) | 849, 1059, 2237, 2547 |
| EcoRV | GATATC | 1 cut(s) | 1689 |
| EcoT14I | CCWWGG | 3 cut(s) | 105, 615, 2073 |
| EcoT38I | GRGCYC | 4 cut(s) | 1902, 2088, 2238, 2247 |
| ErhI | CCWWGG | 3 cut(s) | 105, 615, 2073 |
| Esp3I | CGTCTC | 1 cut(s) | 2363 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1953, 1985 |
| FauI | CCCGC | 3 cut(s) | 691, 1930, 2389 |
| FbaI | TGATCA | 1 cut(s) | 568 |
| Fnu4HI | GCNGC | 5 cut(s) | 324, 612, 912, 2199, 2610 |
| FriOI | GRGCYC | 4 cut(s) | 1902, 2088, 2238, 2247 |
| Fsp4HI | GCNGC | 5 cut(s) | 324, 612, 912, 2199, 2610 |
| FspBI | CTAG | 6 cut(s) | 587, 1562, 1626, 1665, 2276, 2537 |
| GlaI | GCGC | 1 cut(s) | 2347 |
| GluI | GCNGC | 5 cut(s) | 324, 612, 912, 2199, 2610 |
| GsuI | CTGGAG | 3 cut(s) | 1167, 1218, 2250 |
| HaeII | RGCGCY | 1 cut(s) | 2349 |
| HaeIII | GGCC | 3 cut(s) | 371, 710, 2408 |
| HapII | CCGG | 7 cut(s) | 1244, 1403, 1421, 1553, 1820, 1989, 2168 |
| HhaI | GCGC | 1 cut(s) | 2348 |
| Hin6I | GCGC | 1 cut(s) | 2346 |
| HinP1I | GCGC | 1 cut(s) | 2346 |
| HincII | GTYRAC | 1 cut(s) | 628 |
| HindII | GTYRAC | 1 cut(s) | 628 |
| HindIII | AAGCTT | 7 cut(s) | 721, 1275, 1476, 1510, 1749, 1905, 2419 |
| HpaII | CCGG | 7 cut(s) | 1244, 1403, 1421, 1553, 1820, 1989, 2168 |
| HphI | GGTGA | 3 cut(s) | 1166, 1209, 1952 |
| Hpy166II | GTNNAC | 3 cut(s) | 628, 923, 2621 |
| Hpy8I | GTNNAC | 3 cut(s) | 628, 923, 2621 |
| HpyCH4III | ACNGT | 7 cut(s) | 244, 664, 968, 1105, 1330, 2108, 2666 |
| HpyCH4IV | ACGT | 1 cut(s) | 2204 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 482, 835, 1484, 2060, 2242, 2533 |
| HpySE526I | ACGT | 1 cut(s) | 2204 |
| HspAI | GCGC | 1 cut(s) | 2346 |
| Kpn2I | TCCGGA | 1 cut(s) | 1552 |
| KpnI | GGTACC | 1 cut(s) | 1421 |
| KroI | GCCGGC | 1 cut(s) | 2167 |
| KroNI | GCCGGC | 1 cut(s) | 2169 |
| Ksp22I | TGATCA | 1 cut(s) | 568 |
| Kzo9I | GATC | 1 cut(s) | 568 |
| LguI | GCTCTTC | 4 cut(s) | 819, 1794, 2226, 2517 |
| LmnI | GCTCC | 8 cut(s) | 490, 524, 608, 1555, 1629, 2083, 2242, 2269 |
| Lsp1109I | GCAGC | 5 cut(s) | 335, 598, 898, 2185, 2596 |
| LweI | GCATC | 5 cut(s) | 3, 1924, 1996, 2063, 2269 |
| MaeI | CTAG | 6 cut(s) | 587, 1562, 1626, 1665, 2276, 2537 |
| MaeII | ACGT | 1 cut(s) | 2204 |
| MaeIII | GTNAC | 9 cut(s) | 58, 968, 1044, 1294, 1324, 1330, 1351, 1660, 2666 |
| MalI | GATC | 1 cut(s) | 570 |
| MboI | GATC | 1 cut(s) | 568 |
| MhlI | GDGCHC | 7 cut(s) | 869, 1163, 1902, 2088, 2238, 2247, 2567 |
| MlyI | GAGTC | 4 cut(s) | 460, 623, 787, 1898 |
| MmeI | TCCRAC | 3 cut(s) | 328, 683, 1799 |
| MroI | TCCGGA | 1 cut(s) | 1552 |
| MroNI | GCCGGC | 1 cut(s) | 2167 |
| MroXI | GAANNNNTTC | 5 cut(s) | 723, 933, 1608, 2421, 2631 |
| MseI | TTAA | 4 cut(s) | 599, 989, 1128, 1971 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1764 |
| MspA1I | CMGCKG | 1 cut(s) | 326 |
| MspCI | CTTAAG | 1 cut(s) | 1970 |
| MspI | CCGG | 7 cut(s) | 1244, 1403, 1421, 1553, 1820, 1989, 2168 |
| MspR9I | CCNGG | 6 cut(s) | 851, 1061, 1245, 1820, 2239, 2549 |
| MvaI | CCWGG | 4 cut(s) | 851, 1061, 2239, 2549 |
| MvnI | CGCG | 1 cut(s) | 783 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 482, 835, 1484, 2060, 2242, 2533 |
| NaeI | GCCGGC | 1 cut(s) | 2169 |
| NciI | CCSGG | 2 cut(s) | 1245, 1820 |
| NcoI | CCATGG | 1 cut(s) | 2073 |
| NdeII | GATC | 1 cut(s) | 568 |
| NgoMIV | GCCGGC | 1 cut(s) | 2167 |
| NlaIV | GGNNCC | 4 cut(s) | 526, 1419, 1551, 2265 |
| NmuCI | GTSAC | 4 cut(s) | 968, 1044, 1324, 2666 |
| NruI | TCGCGA | 1 cut(s) | 783 |
| NspI | RCATGY | 4 cut(s) | 224, 485, 1029, 1532 |
| NspV | TTCGAA | 2 cut(s) | 1646, 2015 |
| PaeI | GCATGC | 2 cut(s) | 1029, 1532 |
| PagI | TCATGA | 1 cut(s) | 571 |
| PasI | CCCWGGG | 1 cut(s) | 2238 |
| PciSI | GCTCTTC | 4 cut(s) | 819, 1794, 2226, 2517 |
| PdiI | GCCGGC | 1 cut(s) | 2169 |
| PdmI | GAANNNNTTC | 5 cut(s) | 723, 933, 1608, 2421, 2631 |
| PfoI | TCCNGGA | 3 cut(s) | 849, 1059, 2547 |
| PinAI | ACCGGT | 1 cut(s) | 1420 |
| PkrI | GCNGC | 5 cut(s) | 325, 613, 913, 2200, 2611 |
| PleI | GAGTC | 4 cut(s) | 459, 623, 786, 1897 |
| PpsI | GAGTC | 4 cut(s) | 459, 623, 786, 1897 |
| PpuMI | RGGWCCY | 2 cut(s) | 847, 2545 |
| PsiI | TTATAA | 1 cut(s) | 2707 |
| Psp124BI | GAGCTC | 3 cut(s) | 1902, 2088, 2247 |
| Psp1406I | AACGTT | 1 cut(s) | 2204 |
| Psp5II | RGGWCCY | 2 cut(s) | 847, 2545 |
| Psp6I | CCWGG | 4 cut(s) | 849, 1059, 2237, 2547 |
| PspGI | CCWGG | 4 cut(s) | 849, 1059, 2237, 2547 |
| PspN4I | GGNNCC | 4 cut(s) | 526, 1419, 1551, 2265 |
| PspPI | GGNCC | 2 cut(s) | 847, 2545 |
| PspPPI | RGGWCCY | 2 cut(s) | 847, 2545 |
| PstNI | CAGNNNCTG | 3 cut(s) | 850, 1334, 2548 |
| PvuII | CAGCTG | 1 cut(s) | 326 |
| RruI | TCGCGA | 1 cut(s) | 783 |
| RsaI | GTAC | 5 cut(s) | 199, 337, 922, 1419, 2620 |
| RsaNI | GTAC | 5 cut(s) | 198, 336, 921, 1418, 2619 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1764 |
| SacI | GAGCTC | 3 cut(s) | 1902, 2088, 2247 |
| SapI | GCTCTTC | 4 cut(s) | 819, 1794, 2226, 2517 |
| SaqAI | TTAA | 4 cut(s) | 599, 989, 1128, 1971 |
| SatI | GCNGC | 5 cut(s) | 324, 612, 912, 2199, 2610 |
| Sau3AI | GATC | 1 cut(s) | 568 |
| Sau96I | GGNCC | 2 cut(s) | 847, 2545 |
| SchI | GAGTC | 4 cut(s) | 460, 623, 787, 1898 |
| ScrFI | CCNGG | 6 cut(s) | 851, 1061, 1245, 1820, 2239, 2549 |
| SduI | GDGCHC | 7 cut(s) | 869, 1163, 1902, 2088, 2238, 2247, 2567 |
| SfaNI | GCATC | 5 cut(s) | 3, 1924, 1996, 2063, 2269 |
| SfuI | TTCGAA | 2 cut(s) | 1646, 2015 |
| SinI | GGWCC | 2 cut(s) | 847, 2545 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1764 |
| SmlI | CTYRAG | 7 cut(s) | 168, 740, 960, 1970, 2048, 2438, 2658 |
| SmoI | CTYRAG | 7 cut(s) | 168, 740, 960, 1970, 2048, 2438, 2658 |
| SpeI | ACTAGT | 1 cut(s) | 1664 |
| SphI | GCATGC | 2 cut(s) | 1029, 1532 |
| SsiI | CCGC | 6 cut(s) | 698, 873, 1442, 1532, 1937, 2396 |
| SspMI | CTAG | 6 cut(s) | 587, 1562, 1626, 1665, 2276, 2537 |
| SstI | GAGCTC | 3 cut(s) | 1902, 2088, 2247 |
| StyD4I | CCNGG | 6 cut(s) | 849, 1059, 1243, 1818, 2237, 2547 |
| StyI | CCWWGG | 3 cut(s) | 105, 615, 2073 |
| TaaI | ACNGT | 7 cut(s) | 244, 664, 968, 1105, 1330, 2108, 2666 |
| TaiI | ACGT | 1 cut(s) | 2207 |
| TaqI | TCGA | 9 cut(s) | 6, 38, 332, 376, 1011, 1083, 1646, 1677, 2015 |
| TatI | WGTACW | 3 cut(s) | 335, 920, 2618 |
| Tru1I | TTAA | 4 cut(s) | 599, 989, 1128, 1971 |
| Tru9I | TTAA | 4 cut(s) | 599, 989, 1128, 1971 |
| TseFI | GTSAC | 4 cut(s) | 968, 1044, 1324, 2666 |
| TseI | GCWGC | 5 cut(s) | 323, 611, 911, 2198, 2609 |
| Tsp45I | GTSAC | 4 cut(s) | 968, 1044, 1324, 2666 |
| TspGWI | ACGGA | 1 cut(s) | 215 |
| Vha464I | CTTAAG | 1 cut(s) | 1970 |
| VpaK11BI | GGWCC | 2 cut(s) | 847, 2545 |
| XapI | RAATTY | 8 cut(s) | 84, 234, 292, 933, 1203, 1586, 2250, 2631 |
| XbaI | TCTAGA | 1 cut(s) | 2275 |
| XceI | RCATGY | 4 cut(s) | 224, 485, 1029, 1532 |
| XmnI | GAANNNNTTC | 5 cut(s) | 723, 933, 1608, 2421, 2631 |
| XspI | CTAG | 6 cut(s) | 587, 1562, 1626, 1665, 2276, 2537 |