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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 4 cut(s) | 2855, 4208, 5860, 7699 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 8053 |
| Acc16I | TGCGCA | 1 cut(s) | 7600 |
| Acc65I | GGTACC | 2 cut(s) | 8650, 12232 |
| AccB1I | GGYRCC | 4 cut(s) | 6814, 8650, 12232, 13357 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 10799 |
| AccBSI | CCGCTC | 1 cut(s) | 3605 |
| AccI | GTMKAC | 8 cut(s) | 21, 60, 2786, 2947, 7377, 7764, 10571, 10650 |
| AccII | CGCG | 4 cut(s) | 452, 2873, 6374, 9846 |
| AccIII | TCCGGA | 3 cut(s) | 9721, 10877, 12289 |
| AciI | CCGC | 8 cut(s) | 2873, 3083, 3605, 8735, 10184, 11612, 11693, 13659 |
| AclWI | GGATC | 9 cut(s) | 114, 1581, 1893, 3363, 9448, 9619, 11397, 12983, 12996 |
| AcoI | YGGCCR | 2 cut(s) | 259, 6981 |
| AcvI | CACGTG | 1 cut(s) | 2217 |
| AcyI | GRCGYC | 1 cut(s) | 920 |
| AdeI | CACNNNGTG | 4 cut(s) | 10370, 10910, 12020, 13340 |
| AfeI | AGCGCT | 1 cut(s) | 7417 |
| AflII | CTTAAG | 2 cut(s) | 4150, 12994 |
| AgeI | ACCGGT | 2 cut(s) | 6676, 8512 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 5107 |
| AhlI | ACTAGT | 3 cut(s) | 9815, 10417, 11053 |
| AjiI | CACGTC | 2 cut(s) | 6895, 8731 |
| AjnI | CCWGG | 7 cut(s) | 3969, 9804, 9849, 12962, 13500, 13590, 13698 |
| AleI | CACNNNNGTG | 1 cut(s) | 3473 |
| Alw44I | GTGCAC | 4 cut(s) | 1322, 1740, 6619, 11218 |
| AlwI | GGATC | 9 cut(s) | 114, 1581, 1893, 3363, 9448, 9619, 11397, 12983, 12996 |
| AlwNI | CAGNNNCTG | 6 cut(s) | 353, 2063, 6791, 8627, 10799, 12746 |
| Ama87I | CYCGRG | 4 cut(s) | 3616, 5541, 10586, 12668 |
| Aor13HI | TCCGGA | 3 cut(s) | 9721, 10877, 12289 |
| Aor51HI | AGCGCT | 1 cut(s) | 7417 |
| ApaI | GGGCCC | 1 cut(s) | 3970 |
| ApaLI | GTGCAC | 4 cut(s) | 1322, 1740, 6619, 11218 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 122, 154 |
| AseI | ATTAAT | 3 cut(s) | 3315, 6639, 11976 |
| AsiGI | ACCGGT | 2 cut(s) | 6676, 8512 |
| Asp718I | GGTACC | 2 cut(s) | 8650, 12232 |
| AspLEI | GCGC | 7 cut(s) | 304, 7418, 7601, 9181, 9801, 10224, 12745 |
| AsuC2I | CCSGG | 1 cut(s) | 10535 |
| AsuII | TTCGAA | 5 cut(s) | 393, 6722, 8558, 10833, 11645 |
| AvaI | CYCGRG | 4 cut(s) | 3616, 5541, 10586, 12668 |
| AvaII | GGWCC | 8 cut(s) | 232, 2642, 3973, 5941, 6089, 11012, 13435, 13702 |
| AxyI | CCTNAGG | 2 cut(s) | 10470, 13362 |
| BaeGI | GKGCMC | 5 cut(s) | 1326, 1744, 3970, 6623, 11222 |
| BaeI | ACNNNNGTAYC | 8 cut(s) | 2679, 2712, 5907, 5940, 7746, 7779, 14043, 14076 |
| BalI | TGGCCA | 1 cut(s) | 6983 |
| BamHI | GGATCC | 1 cut(s) | 12988 |
| BanI | GGYRCC | 4 cut(s) | 6814, 8650, 12232, 13357 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 646, 678, 5262, 5294, 6063, 6095 |
| BbrPI | CACGTG | 1 cut(s) | 2217 |
| BbvCI | CCTCAGC | 1 cut(s) | 6810 |
| BceAI | ACGGC | 2 cut(s) | 2988, 13491 |
| BciT130I | CCWGG | 7 cut(s) | 3971, 9806, 9851, 12964, 13502, 13592, 13700 |
| BciVI | GTATCC | 5 cut(s) | 979, 5353, 6988, 8824, 9571 |
| BcnI | CCSGG | 1 cut(s) | 10535 |
| BcuI | ACTAGT | 3 cut(s) | 9815, 10417, 11053 |
| BfmI | CTRYAG | 9 cut(s) | 429, 1110, 1854, 1998, 3849, 5317, 5448, 8940, 11187 |
| BfoI | RGCGCY | 2 cut(s) | 7419, 12746 |
| BfrI | CTTAAG | 2 cut(s) | 4150, 12994 |
| BfuI | GTATCC | 5 cut(s) | 979, 5353, 6988, 8824, 9571 |
| BglII | AGATCT | 4 cut(s) | 5003, 6650, 8486, 11548 |
| BlpI | GCTNAGC | 1 cut(s) | 5071 |
| Bme1390I | CCNGG | 8 cut(s) | 3971, 9806, 9851, 10535, 12964, 13502, 13592, 13700 |
| Bme18I | GGWCC | 8 cut(s) | 232, 2642, 3973, 5941, 6089, 11012, 13435, 13702 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 5107 |
| BmeT110I | CYCGRG | 4 cut(s) | 3616, 5541, 10586, 12668 |
| BmgBI | CACGTC | 2 cut(s) | 6895, 8731 |
| BmrFI | CCNGG | 8 cut(s) | 3971, 9806, 9851, 10535, 12964, 13502, 13592, 13700 |
| BmrI | ACTGGG | 2 cut(s) | 9797, 10269 |
| BmuI | ACTGGG | 2 cut(s) | 9797, 10269 |
| BoxI | GACNNNNGTC | 1 cut(s) | 13440 |
| Bpu10I | CCTNAGC | 3 cut(s) | 4638, 6810, 11175 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 5071 |
| Bpu14I | TTCGAA | 5 cut(s) | 393, 6722, 8558, 10833, 11645 |
| BpuMI | CCSGG | 1 cut(s) | 10535 |
| Bsa29I | ATCGAT | 2 cut(s) | 2136, 3390 |
| BsaAI | YACGTR | 2 cut(s) | 2217, 2784 |
| BsaBI | GATNNNNATC | 5 cut(s) | 111, 789, 7491, 9324, 12987 |
| BsaHI | GRCGYC | 1 cut(s) | 920 |
| BsaWI | WCCGGW | 5 cut(s) | 6676, 8512, 9721, 10877, 12289 |
| Bse118I | RCCGGY | 3 cut(s) | 257, 6676, 8512 |
| Bse21I | CCTNAGG | 2 cut(s) | 10470, 13362 |
| Bse8I | GATNNNNATC | 5 cut(s) | 111, 789, 7491, 9324, 12987 |
| BseAI | TCCGGA | 3 cut(s) | 9721, 10877, 12289 |
| BseBI | CCWGG | 7 cut(s) | 3971, 9806, 9851, 12964, 13502, 13592, 13700 |
| BseCI | ATCGAT | 2 cut(s) | 2136, 3390 |
| BseJI | GATNNNNATC | 5 cut(s) | 111, 789, 7491, 9324, 12987 |
| BseSI | GKGCMC | 5 cut(s) | 1326, 1744, 3970, 6623, 11222 |
| BsgI | GTGCAG | 9 cut(s) | 958, 5169, 6804, 6917, 6937, 8640, 8664, 8773, 11673 |
| Bsh1236I | CGCG | 4 cut(s) | 452, 2873, 6374, 9846 |
| Bsh1285I | CGRYCG | 1 cut(s) | 13659 |
| BshNI | GGYRCC | 4 cut(s) | 6814, 8650, 12232, 13357 |
| BshTI | ACCGGT | 2 cut(s) | 6676, 8512 |
| BshVI | ATCGAT | 2 cut(s) | 2136, 3390 |
| BsiEI | CGRYCG | 1 cut(s) | 13659 |
| BsiHKCI | CYCGRG | 4 cut(s) | 3616, 5541, 10586, 12668 |
| BsiSI | CCGG | 7 cut(s) | 258, 6677, 8513, 9722, 10535, 10878, 12290 |
| BslFI | GGGAC | 2 cut(s) | 1704, 8311 |
| BsmBI | CGTCTC | 3 cut(s) | 6170, 6885, 8721 |
| BsmFI | GGGAC | 2 cut(s) | 1704, 8311 |
| BsmI | GAATGC | 8 cut(s) | 961, 4585, 6326, 8162, 9596, 11297, 12945, 14119 |
| BsoBI | CYCGRG | 4 cut(s) | 3616, 5541, 10586, 12668 |
| Bsp119I | TTCGAA | 5 cut(s) | 393, 6722, 8558, 10833, 11645 |
| Bsp120I | GGGCCC | 1 cut(s) | 3966 |
| Bsp13I | TCCGGA | 3 cut(s) | 9721, 10877, 12289 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 5071 |
| Bsp19I | CCATGG | 1 cut(s) | 13431 |
| Bsp68I | TCGCGA | 3 cut(s) | 452, 6374, 9846 |
| BspACI | CCGC | 8 cut(s) | 2873, 3083, 3605, 8735, 10184, 11612, 11693, 13659 |
| BspDI | ATCGAT | 2 cut(s) | 2136, 3390 |
| BspEI | TCCGGA | 3 cut(s) | 9721, 10877, 12289 |
| BspFNI | CGCG | 4 cut(s) | 452, 2873, 6374, 9846 |
| BspHI | TCATGA | 5 cut(s) | 3529, 4327, 7561, 11515, 13351 |
| BspMAI | CTGCAG | 5 cut(s) | 433, 1114, 2002, 5321, 5452 |
| BspPI | GGATC | 9 cut(s) | 114, 1581, 1893, 3363, 9448, 9619, 11397, 12983, 12996 |
| BspT104I | TTCGAA | 5 cut(s) | 393, 6722, 8558, 10833, 11645 |
| BspT107I | GGYRCC | 4 cut(s) | 6814, 8650, 12232, 13357 |
| BspTI | CTTAAG | 2 cut(s) | 4150, 12994 |
| BsrBI | CCGCTC | 1 cut(s) | 3605 |
| BsrFI | RCCGGY | 3 cut(s) | 257, 6676, 8512 |
| BssAI | RCCGGY | 3 cut(s) | 257, 6676, 8512 |
| BssNAI | GTATAC | 2 cut(s) | 2787, 10572 |
| BssNI | GRCGYC | 1 cut(s) | 920 |
| Bst1107I | GTATAC | 2 cut(s) | 2787, 10572 |
| Bst2UI | CCWGG | 7 cut(s) | 3971, 9806, 9851, 12964, 13502, 13592, 13700 |
| BstACI | GRCGYC | 1 cut(s) | 920 |
| BstAFI | CTTAAG | 2 cut(s) | 4150, 12994 |
| BstAPI | GCANNNNNTGC | 6 cut(s) | 871, 1118, 1871, 7985, 9431, 10181 |
| BstBAI | YACGTR | 2 cut(s) | 2217, 2784 |
| BstBI | TTCGAA | 5 cut(s) | 393, 6722, 8558, 10833, 11645 |
| BstDSI | CCRYGG | 3 cut(s) | 4299, 9150, 13431 |
| BstEII | GGTNACC | 3 cut(s) | 2455, 3307, 4294 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 743 |
| BstFNI | CGCG | 4 cut(s) | 452, 2873, 6374, 9846 |
| BstH2I | RGCGCY | 2 cut(s) | 7419, 12746 |
| BstHHI | GCGC | 7 cut(s) | 304, 7418, 7601, 9181, 9801, 10224, 12745 |
| BstMCI | CGRYCG | 1 cut(s) | 13659 |
| BstNI | CCWGG | 7 cut(s) | 3971, 9806, 9851, 12964, 13502, 13592, 13700 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 13440 |
| BstPI | GGTNACC | 3 cut(s) | 2455, 3307, 4294 |
| BstSCI | CCNGG | 8 cut(s) | 3969, 9804, 9849, 10533, 12962, 13500, 13590, 13698 |
| BstSFI | CTRYAG | 9 cut(s) | 429, 1110, 1854, 1998, 3849, 5317, 5448, 8940, 11187 |
| BstSLI | GKGCMC | 5 cut(s) | 1326, 1744, 3970, 6623, 11222 |
| BstUI | CGCG | 4 cut(s) | 452, 2873, 6374, 9846 |
| BstX2I | RGATCY | 9 cut(s) | 1885, 3368, 5003, 6650, 8486, 9624, 11402, 11548, 12988 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 7321, 10325 |
| BstYI | RGATCY | 9 cut(s) | 1885, 3368, 5003, 6650, 8486, 9624, 11402, 11548, 12988 |
| BstZ17I | GTATAC | 2 cut(s) | 2787, 10572 |
| Bsu15I | ATCGAT | 2 cut(s) | 2136, 3390 |
| Bsu36I | CCTNAGG | 2 cut(s) | 10470, 13362 |
| BsuI | GTATCC | 5 cut(s) | 979, 5353, 6988, 8824, 9571 |
| BsuTUI | ATCGAT | 2 cut(s) | 2136, 3390 |
| BtgI | CCRYGG | 3 cut(s) | 4299, 9150, 13431 |
| BtrI | CACGTC | 2 cut(s) | 6895, 8731 |
| BtsI | GCAGTG | 2 cut(s) | 5445, 12564 |
| BtuMI | TCGCGA | 3 cut(s) | 452, 6374, 9846 |
| CaiI | CAGNNNCTG | 6 cut(s) | 353, 2063, 6791, 8627, 10799, 12746 |
| CciI | TCATGA | 5 cut(s) | 3529, 4327, 7561, 11515, 13351 |
| CfoI | GCGC | 7 cut(s) | 304, 7418, 7601, 9181, 9801, 10224, 12745 |
| Cfr10I | RCCGGY | 3 cut(s) | 257, 6676, 8512 |
| ClaI | ATCGAT | 2 cut(s) | 2136, 3390 |
| CseI | GACGC | 6 cut(s) | 928, 2879, 5384, 7019, 12137, 12445 |
| CspAI | ACCGGT | 2 cut(s) | 6676, 8512 |
| DraI | TTTAAA | 3 cut(s) | 2817, 6115, 11389 |
| DraIII | CACNNNGTG | 4 cut(s) | 10370, 10910, 12020, 13340 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 8053 |
| DriI | GACNNNNNGTC | 1 cut(s) | 5107 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 8053 |
| EaeI | YGGCCR | 2 cut(s) | 259, 6981 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 5107 |
| Ecl136II | GAGCTC | 6 cut(s) | 2175, 4521, 7194, 10600, 12304, 12466 |
| Eco147I | AGGCCT | 1 cut(s) | 10394 |
| Eco32I | GATATC | 6 cut(s) | 2134, 3271, 3388, 9211, 10059, 13818 |
| Eco47I | GGWCC | 8 cut(s) | 232, 2642, 3973, 5941, 6089, 11012, 13435, 13702 |
| Eco47III | AGCGCT | 1 cut(s) | 7417 |
| Eco53kI | GAGCTC | 6 cut(s) | 2175, 4521, 7194, 10600, 12304, 12466 |
| Eco72I | CACGTG | 1 cut(s) | 2217 |
| Eco81I | CCTNAGG | 2 cut(s) | 10470, 13362 |
| Eco88I | CYCGRG | 4 cut(s) | 3616, 5541, 10586, 12668 |
| Eco91I | GGTNACC | 3 cut(s) | 2455, 3307, 4294 |
| EcoICRI | GAGCTC | 6 cut(s) | 2175, 4521, 7194, 10600, 12304, 12466 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 743 |
| EcoO109I | RGGNCCY | 4 cut(s) | 3966, 3967, 11012, 13702 |
| EcoO65I | GGTNACC | 3 cut(s) | 2455, 3307, 4294 |
| EcoRII | CCWGG | 7 cut(s) | 3969, 9804, 9849, 12962, 13500, 13590, 13698 |
| EcoRV | GATATC | 6 cut(s) | 2134, 3271, 3388, 9211, 10059, 13818 |
| EcoT22I | ATGCAT | 4 cut(s) | 1123, 6326, 6565, 8162 |
| Esp3I | CGTCTC | 3 cut(s) | 6170, 6885, 8721 |
| FaqI | GGGAC | 2 cut(s) | 1704, 8311 |
| FauI | CCCGC | 1 cut(s) | 2866 |
| FblI | GTMKAC | 8 cut(s) | 21, 60, 2786, 2947, 7377, 7764, 10571, 10650 |
| FspI | TGCGCA | 1 cut(s) | 7600 |
| GlaI | GCGC | 7 cut(s) | 303, 7417, 7600, 9180, 9800, 10223, 12744 |
| HaeII | RGCGCY | 2 cut(s) | 7419, 12746 |
| HapII | CCGG | 7 cut(s) | 258, 6677, 8513, 9722, 10535, 10878, 12290 |
| HgaI | GACGC | 6 cut(s) | 928, 2879, 5384, 7019, 12137, 12445 |
| HhaI | GCGC | 7 cut(s) | 304, 7418, 7601, 9181, 9801, 10224, 12745 |
| Hin1I | GRCGYC | 1 cut(s) | 920 |
| Hin6I | GCGC | 7 cut(s) | 302, 7416, 7599, 9179, 9799, 10222, 12743 |
| HinP1I | GCGC | 7 cut(s) | 302, 7416, 7599, 9179, 9799, 10222, 12743 |
| HincII | GTYRAC | 4 cut(s) | 61, 1669, 3214, 6184 |
| HindII | GTYRAC | 4 cut(s) | 61, 1669, 3214, 6184 |
| HpaI | GTTAAC | 1 cut(s) | 6184 |
| HpaII | CCGG | 7 cut(s) | 258, 6677, 8513, 9722, 10535, 10878, 12290 |
| Hpy99I | CGWCG | 1 cut(s) | 13477 |
| HpyCH4IV | ACGT | 7 cut(s) | 2216, 2783, 3067, 3984, 6894, 8730, 12016 |
| HpySE526I | ACGT | 7 cut(s) | 2216, 2783, 3067, 3984, 6894, 8730, 12016 |
| Hsp92I | GRCGYC | 1 cut(s) | 920 |
| HspAI | GCGC | 7 cut(s) | 302, 7416, 7599, 9179, 9799, 10222, 12743 |
| Kpn2I | TCCGGA | 3 cut(s) | 9721, 10877, 12289 |
| KpnI | GGTACC | 2 cut(s) | 8654, 12236 |
| KroI | GCCGGC | 1 cut(s) | 257 |
| KroNI | GCCGGC | 1 cut(s) | 259 |
| KspAI | GTTAAC | 1 cut(s) | 6184 |
| MaeII | ACGT | 7 cut(s) | 2216, 2783, 3067, 3984, 6894, 8730, 12016 |
| MbiI | CCGCTC | 1 cut(s) | 3605 |
| MfeI | CAATTG | 6 cut(s) | 4497, 5637, 7998, 9747, 12951, 13155 |
| MflI | RGATCY | 9 cut(s) | 1885, 3368, 5003, 6650, 8486, 9624, 11402, 11548, 12988 |
| MlsI | TGGCCA | 1 cut(s) | 6983 |
| MluNI | TGGCCA | 1 cut(s) | 6983 |
| Mox20I | TGGCCA | 1 cut(s) | 6983 |
| Mph1103I | ATGCAT | 4 cut(s) | 1123, 6326, 6565, 8162 |
| MroI | TCCGGA | 3 cut(s) | 9721, 10877, 12289 |
| MroNI | GCCGGC | 1 cut(s) | 257 |
| MscI | TGGCCA | 1 cut(s) | 6983 |
| MslI | CAYNNNNRTG | 5 cut(s) | 3473, 4662, 10620, 12588, 13950 |
| Msp20I | TGGCCA | 1 cut(s) | 6983 |
| MspCI | CTTAAG | 2 cut(s) | 4150, 12994 |
| MspI | CCGG | 7 cut(s) | 258, 6677, 8513, 9722, 10535, 10878, 12290 |
| MspR9I | CCNGG | 8 cut(s) | 3971, 9806, 9851, 10535, 12964, 13502, 13592, 13700 |
| MunI | CAATTG | 6 cut(s) | 4497, 5637, 7998, 9747, 12951, 13155 |
| Mva1269I | GAATGC | 8 cut(s) | 961, 4585, 6326, 8162, 9596, 11297, 12945, 14119 |
| MvaI | CCWGG | 7 cut(s) | 3971, 9806, 9851, 12964, 13502, 13592, 13700 |
| MvnI | CGCG | 4 cut(s) | 452, 2873, 6374, 9846 |
| NaeI | GCCGGC | 1 cut(s) | 259 |
| NciI | CCSGG | 1 cut(s) | 10535 |
| NcoI | CCATGG | 1 cut(s) | 13431 |
| NgoMIV | GCCGGC | 1 cut(s) | 257 |
| NmeAIII | GCCGAG | 3 cut(s) | 3796, 6223, 11337 |
| NruI | TCGCGA | 3 cut(s) | 452, 6374, 9846 |
| NsbI | TGCGCA | 1 cut(s) | 7600 |
| NsiI | ATGCAT | 4 cut(s) | 1123, 6326, 6565, 8162 |
| NspV | TTCGAA | 5 cut(s) | 393, 6722, 8558, 10833, 11645 |
| OliI | CACNNNNGTG | 1 cut(s) | 3473 |
| PaeI | GCATGC | 2 cut(s) | 3200, 10124 |
| PaeR7I | CTCGAG | 2 cut(s) | 5541, 12668 |
| PagI | TCATGA | 5 cut(s) | 3529, 4327, 7561, 11515, 13351 |
| PaqCI | CACCTGC | 4 cut(s) | 2855, 4208, 5860, 7699 |
| PasI | CCCWGGG | 1 cut(s) | 12963 |
| PceI | AGGCCT | 1 cut(s) | 10394 |
| PciI | ACATGT | 8 cut(s) | 523, 3470, 4730, 4979, 5257, 6626, 8300, 8462 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1728 |
| PctI | GAATGC | 8 cut(s) | 961, 4585, 6326, 8162, 9596, 11297, 12945, 14119 |
| PdiI | GCCGGC | 1 cut(s) | 259 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 10799 |
| PfoI | TCCNGGA | 2 cut(s) | 10533, 13698 |
| PinAI | ACCGGT | 2 cut(s) | 6676, 8512 |
| PmaCI | CACGTG | 1 cut(s) | 2217 |
| PmlI | CACGTG | 1 cut(s) | 2217 |
| Ppu21I | YACGTR | 2 cut(s) | 2217, 2784 |
| PpuMI | RGGWCCY | 2 cut(s) | 11012, 13702 |
| PscI | ACATGT | 8 cut(s) | 523, 3470, 4730, 4979, 5257, 6626, 8300, 8462 |
| PshAI | GACNNNNGTC | 1 cut(s) | 13440 |
| PshBI | ATTAAT | 3 cut(s) | 3315, 6639, 11976 |
| Psp124BI | GAGCTC | 6 cut(s) | 2177, 4523, 7196, 10602, 12306, 12468 |
| Psp5II | RGGWCCY | 2 cut(s) | 11012, 13702 |
| Psp6I | CCWGG | 7 cut(s) | 3969, 9804, 9849, 12962, 13500, 13590, 13698 |
| PspCI | CACGTG | 1 cut(s) | 2217 |
| PspEI | GGTNACC | 3 cut(s) | 2455, 3307, 4294 |
| PspGI | CCWGG | 7 cut(s) | 3969, 9804, 9849, 12962, 13500, 13590, 13698 |
| PspOMI | GGGCCC | 1 cut(s) | 3966 |
| PspPPI | RGGWCCY | 2 cut(s) | 11012, 13702 |
| PspXI | VCTCGAGB | 1 cut(s) | 12668 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1107, 1139 |
| PstI | CTGCAG | 5 cut(s) | 433, 1114, 2002, 5321, 5452 |
| PstNI | CAGNNNCTG | 6 cut(s) | 353, 2063, 6791, 8627, 10799, 12746 |
| PsuI | RGATCY | 9 cut(s) | 1885, 3368, 5003, 6650, 8486, 9624, 11402, 11548, 12988 |
| RruI | TCGCGA | 3 cut(s) | 452, 6374, 9846 |
| RseI | CAYNNNNRTG | 5 cut(s) | 3473, 4662, 10620, 12588, 13950 |
| SacI | GAGCTC | 6 cut(s) | 2177, 4523, 7196, 10602, 12306, 12468 |
| SalI | GTCGAC | 1 cut(s) | 59 |
| ScrFI | CCNGG | 8 cut(s) | 3971, 9806, 9851, 10535, 12964, 13502, 13592, 13700 |
| SfcI | CTRYAG | 9 cut(s) | 429, 1110, 1854, 1998, 3849, 5317, 5448, 8940, 11187 |
| Sfr274I | CTCGAG | 2 cut(s) | 5541, 12668 |
| SfuI | TTCGAA | 5 cut(s) | 393, 6722, 8558, 10833, 11645 |
| SinI | GGWCC | 8 cut(s) | 232, 2642, 3973, 5941, 6089, 11012, 13435, 13702 |
| SlaI | CTCGAG | 2 cut(s) | 5541, 12668 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 3473, 4662, 10620, 12588, 13950 |
| SpeI | ACTAGT | 3 cut(s) | 9815, 10417, 11053 |
| SphI | GCATGC | 2 cut(s) | 3200, 10124 |
| SseBI | AGGCCT | 1 cut(s) | 10394 |
| SsiI | CCGC | 8 cut(s) | 2873, 3083, 3605, 8735, 10184, 11612, 11693, 13659 |
| SspI | AATATT | 4 cut(s) | 68, 5158, 6885, 8721 |
| SstI | GAGCTC | 6 cut(s) | 2177, 4523, 7196, 10602, 12306, 12468 |
| StuI | AGGCCT | 1 cut(s) | 10394 |
| StyD4I | CCNGG | 8 cut(s) | 3969, 9804, 9849, 10533, 12962, 13500, 13590, 13698 |
| TaiI | ACGT | 7 cut(s) | 2219, 2786, 3070, 3987, 6897, 8733, 12019 |
| TauI | GCSGC | 1 cut(s) | 8737 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 10799 |
| Vha464I | CTTAAG | 2 cut(s) | 4150, 12994 |
| VneI | GTGCAC | 4 cut(s) | 1322, 1740, 6619, 11218 |
| VpaK11BI | GGWCC | 8 cut(s) | 232, 2642, 3973, 5941, 6089, 11012, 13435, 13702 |
| VspI | ATTAAT | 3 cut(s) | 3315, 6639, 11976 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 743 |
| XbaI | TCTAGA | 5 cut(s) | 2089, 9922, 11399, 11551, 14045 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 100 |
| XhoI | CTCGAG | 2 cut(s) | 5541, 12668 |
| XmiI | GTMKAC | 8 cut(s) | 21, 60, 2786, 2947, 7377, 7764, 10571, 10650 |
| Zsp2I | ATGCAT | 4 cut(s) | 1123, 6326, 6565, 8162 |