Rorug02G0562400

No description available

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
68775394 .. 68778291
2898 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0562400.1

Sequence Viewer

Length: 2898 bp
ATGGCTGATGCACTCATCTCCGTGCTTCTGGAGCAATTGGCTTCAGTAGTATATCAACACACAAATCAAGCGGTGAAACTGGTTTTGAATGCTGAGAAAGACGTTAAAAGTTTCAGCAGCAAGCTCAAAGCTATCCAGGCTATGCTTGAGGACGCAGAGAAGAAACAATTGACAGATGCTAGGGTGGAAGACTGGTTGGAGAAGCTGAAAGATGTCTCGTACGAGATGGACGACCTGCTAGATGAGTGGAACACTGAAATTCTCAAACGACAAGTGGAGGAGAAGCAAGAGAAGGAAGGAGAAAATGCTCCTGTTACAAAGAAGAAGGTTTGTTTCCCCATGTCCTCTGTTTGCTTTTGTTTTGGACAAGCCAATAAGGTCATTCATCGTCGTAACATAGCTAAAAGGATAGGGGAACTGAATGAGAAGTTAACTTTGATTGCTGCTGAAAGAGAAATGTATGGCTTTCATCAGTCCACAAAAGGTGGCCCTGATGATCAGCAACTTATTCAACGACATAAGACTTCATCTTTGGTCGATATATCTACGATATTTGGCCGAGAAGAAGAAAAAGAGATGTTGTTGAGCAAGTTGTTGAGAGAGAGTAGCCCGGAAGGGGGGAGGTTCCTTGTCATCCCTATTGTAGGGATGGGAGGGATGGGCAAAACAACTCTTGCCCAATTAGCTTATAATGATGAAAAGGTTACAAACTATTTTCATAAGAAAGTATGGGTTTGTGTCTCGAGCCCTTTTGACGAGATTAAGATTGCCAAAGCGATCATTGAGAGTCTAGATAGAAATGAAACCCAAAAGAGTTCAAATGAGTTGGAAACTCTCTTAATATGTATAAGGTCACACGTTAAGGATAAGAAGTTCTTTCTTGTCCTAGATGATGTATGGACAGAAAACCCAAAAAAGTGGGAAAGTTTGAAACTACCAGTAATAATGCAAAGTTGTGCTGAAGGTAGTAGAATACTAGTGACCACACGAAAACAAGGGGTTGCAAAAATGATGAGAGCAACCAGTAGCATGATCCATTTAGACAAGTTGAGCGATAGGGATTGTCTAGCATTGTTCAATAGCATCGCATTTTTGGATAGGAAAGAAGATGAGGCTGATGAGTTTGGAGCTATTGGTGAGGAAATTGCGAAAAAGTGTAAAGGTTTGCCTCTTGCTGCAAAAACTTTAGGCAGTCTAGTGTGGTATAAAAAAACAAGAGAAGAATGGCGGGATGTTCTGAATAGTAAGATATGGGAATTAGAGGAAGTTGAGGAACAAGTTTTCCGACCACTATTGCTAAGTTATTATGATTTGGTCCCAACAGTCAAAAGGTGTCTTTTGTATTGTGCTATATTTCCCAAAGATTATAATTTGAAAAAAGATAATTTGATTGAGCTTTGGATGTCACAAGATTATCTTAGTTCAAAAGAAAATAAAGAAAAGAGAAGAAAAGGTCAATATTATTTTGAGAGTCTAGCAATGCGGTCTTTCTTTCAAGATTTTGACGTAGATGAGATGGGAAATATTGTAGGGTGCAAAATGCATGATATTGTGCATGACTTTGTGCAATTTCTCACCAAAAAAGAATGCATTATTATAGAAGCAATTAAGGGTGATAATCAAATAGTGGAGCTACAGGGTGAAAAGATTCGTCATTTGACCTTTGCAAATGTACCCGAATTTCCTACTTCATGTGACAGATGCGTATATGTGCGTAGCCTCACACTCCTTCATTCAAGCATTAGAACCATAAGCCCCGGTTCAATTTTGAAAATGAAATGCCTTAGGACATTGAATTTGAGTGAAAGTGTCCTAACTGAACTTCCAAAAGAGGTGGGTGAATTGATTCATTTGAGATATATGGATTTGTCTTATAGTAGATTGAAAGAATTACCGGATGCTGTGTGTGATTTATACAATCTACAAACTCTGGTCCTTGTTTGGTGTGGGAGTCTTGAGAAACTACCCAAGGCAATGGGAAAGTTGATCAACTTAAAGCATCTATATGTTCGGGGTTGTCGTGAGCTGAGGTACTTGCCAAAAGGGATTGGGAGTTTGAAAAGTCTGCAAGCACTAGACTCCTTTTATGTATGTGATCAGGGCGGTGATAATGAAGCAGCATTGAAATTAGGAGATCTCGGAATCATGGACCAGCTTCCGGGGAGCCTTTGGATAGAAAGATTGGGGAAAGATGGTGCAAGTGAGATAGAGAAAGCACAGTTGGGGAATAAGGAGTACCTCTCTCATTTGGGAGTATATTTCGAGGAAGTATGTGAAGAGCAGAGAAAAGGTGATTCAGAAATAGTGAAAGCATTGCAACCACATCAAAATTTGGAATCTTTATTAATTGCGTATTGCCATGGCACCACCGACTCTCTCTATTGGATCAAGTCTTTACGCAATTTGAGAAAACTTGTTCTCTATGAATGGAAATATTGTGAAGTTTTGCCTCCTCTTGGAAAATTGCCATCGCTTGAAATTTTGGAAATACAGGAATTCCAGAATGTGAAAAAGGTGGGAGTTGAATTTCTGGGAATAGAAGAACAAGTCTCAGGAATTCTATTCCCCAAATTGAAACGACTTTCTTTGGGTCGCATGCACAAGTGGGAAGAGTGGGAAGGAATAACAGAGGATTCTTCTGAAATTACAATTGAGTGGGAAGGAATAACAAAGGAGGATTCTTCTTCTTCTGAAATTACAATAATGCCTCGCCTTTCTTCCTTGCAAATTACCAAGTGCCCAAAGCTCAAAGCACTGCCAAACTTCCTGAACAAGATAACAACGCTGCGTACTTTGGAGATCAAGGCTTGTCCGATTCTCGAACGAGACTACCAACAAGGCGTGGGGAAGGAGTGGCACAACATTTCTCACATCCCAAACGTCTCAATTTCCAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

965

Amino Acids

110.52

Weight (kDa)

6.2

Isoelectric Point (pI)

49.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 97 1.7e-21 Rx N-terminal domain
NB-ARC PF00931 188 - 365 2e-35 NB-ARC domain
WHD_DRP PF23559 451 - 522 1e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 571 - 864 2.7e-32 Leucine-rich repeat region
LRR_8 PF13855 571 - 628 9.2e-06 Leucine rich repeat
LRR_R13L1-DRL21 PF25019 711 - 832 2e-22 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 690, 1368
Acc36I ACCTGC 1 cut(s) 243
AccB1I GGYRCC 1 cut(s) 2363
AciI CCGC 4 cut(s) 71, 1228, 1483, 2103
AclWI GGATC 2 cut(s) 1027, 2393
AcoI YGGCCR 1 cut(s) 556
AcsI RAATTY 8 cut(s) 258, 1679, 1795, 2329, 2478, 2495, 2525, 2556
AcuI CTGAAG 2 cut(s) 27, 981
AfaI GTAC 5 cut(s) 221, 1674, 2033, 2237, 2791
AfiI CCNNNNNNNGG 5 cut(s) 616, 617, 644, 2158, 2456
AflIII ACRYGT 1 cut(s) 856
AhlI ACTAGT 1 cut(s) 976
AjnI CCWGG 1 cut(s) 135
AjuI GAANNNNNNNTTGG 2 cut(s) 2204, 2236
AloI GAACNNNNNNTCC 4 cut(s) 857, 889, 1266, 1298
Alw26I GTCTC 5 cut(s) 220, 745, 2554, 2820, 2887
AlwI GGATC 2 cut(s) 1027, 2393
Ama87I CYCGRG 1 cut(s) 742
AoxI GGCC 2 cut(s) 487, 556
ApeKI GCWGC 5 cut(s) 117, 443, 1175, 2117, 2785
ApoI RAATTY 8 cut(s) 258, 1679, 1795, 2329, 2478, 2495, 2525, 2556
ArsI GACNNNNNNTTYG 4 cut(s) 514, 546, 1780, 1812
AseI ATTAAT 1 cut(s) 2345
Asp700I GAANNNNTTC 2 cut(s) 1647, 1845
AspS9I GGNCC 4 cut(s) 488, 1315, 1933, 2149
AsuC2I CCSGG 3 cut(s) 611, 1758, 2160
AsuHPI GGTGA 8 cut(s) 85, 1148, 1567, 1625, 1652, 1850, 2117, 2303
AvaI CYCGRG 1 cut(s) 742
AvaII GGWCC 3 cut(s) 1315, 1933, 2149
AxyI CCTNAGG 1 cut(s) 1784
BaeGI GKGCMC 1 cut(s) 2741
BanI GGYRCC 1 cut(s) 2363
BanII GRGCYC 1 cut(s) 749
BbsI GAAGAC 1 cut(s) 195
BbvCI CCTCAGC 1 cut(s) 2027
BbvI GCAGC 5 cut(s) 129, 430, 1162, 2129, 2772
BccI CCATC 6 cut(s) 220, 643, 652, 1510, 2186, 2476
BciT130I CCWGG 1 cut(s) 137
BclI TGATCA 3 cut(s) 496, 1986, 2095
BcnI CCSGG 3 cut(s) 611, 1758, 2160
BcoDI GTCTC 5 cut(s) 220, 745, 2554, 2820, 2887
BcuI ACTAGT 1 cut(s) 976
BfaI CTAG 9 cut(s) 180, 239, 791, 887, 977, 1067, 1196, 1475, 2075
BfmI CTRYAG 1 cut(s) 1634
BfuAI ACCTGC 1 cut(s) 243
BglII AGATCT 1 cut(s) 2134
BisI GCNGC 5 cut(s) 118, 444, 1176, 2118, 2786
BlsI GCNGC 5 cut(s) 119, 445, 1177, 2119, 2787
Bme1390I CCNGG 4 cut(s) 137, 611, 1758, 2160
Bme18I GGWCC 3 cut(s) 1315, 1933, 2149
BmeT110I CYCGRG 1 cut(s) 742
BmgT120I GGNCC 4 cut(s) 488, 1315, 1933, 2149
BmiI GGNNCC 4 cut(s) 626, 1317, 2165, 2365
BmrFI CCNGG 4 cut(s) 137, 611, 1758, 2160
BmsI GCATC 5 cut(s) 166, 1092, 1691, 1888, 2008
BpiI GAAGAC 1 cut(s) 195
BplI GAGNNNNNCTC 2 cut(s) 2225, 2257
BpmI CTGGAG 1 cut(s) 50
Bpu10I CCTNAGC 1 cut(s) 2027
BpuEI CTTGAG 2 cut(s) 167, 1976
BpuMI CCSGG 3 cut(s) 611, 1758, 2160
BsaJI CCNNGG 4 cut(s) 1756, 1968, 2159, 2359
BsaWI WCCGGW 1 cut(s) 1894
Bsc4I CCNNNNNNNGG 5 cut(s) 616, 617, 644, 2158, 2456
Bse1I ACTGG 4 cut(s) 84, 197, 938, 1023
Bse21I CCTNAGG 1 cut(s) 1784
Bse3DI GCAATG 3 cut(s) 1485, 1980, 2312
BseBI CCWGG 1 cut(s) 137
BseDI CCNNGG 4 cut(s) 1756, 1968, 2159, 2359
BseGI GGATG 7 cut(s) 633, 654, 663, 1237, 1407, 1903, 2871
BseLI CCNNNNNNNGG 5 cut(s) 616, 617, 644, 2158, 2456
BseMI GCAATG 3 cut(s) 1485, 1980, 2312
BseMII CTCAG 3 cut(s) 84, 2018, 2565
BseNI ACTGG 4 cut(s) 84, 197, 938, 1023
BseRI GAGGAG 2 cut(s) 293, 2442
BseSI GKGCMC 1 cut(s) 2741
BseXI GCAGC 5 cut(s) 129, 430, 1162, 2129, 2772
BshFI GGCC 2 cut(s) 489, 558
BshNI GGYRCC 1 cut(s) 2363
BsiHKCI CYCGRG 1 cut(s) 742
BsiSI CCGG 4 cut(s) 611, 1758, 1895, 2159
BsiWI CGTACG 1 cut(s) 219
BslFI GGGAC 1 cut(s) 1301
BslI CCNNNNNNNGG 5 cut(s) 616, 617, 644, 2158, 2456
BsmAI GTCTC 5 cut(s) 220, 745, 2554, 2820, 2887
BsmBI CGTCTC 1 cut(s) 2887
BsmFI GGGAC 1 cut(s) 1301
BsmI GAATGC 2 cut(s) 94, 1592
BsnI GGCC 2 cut(s) 489, 558
BsoBI CYCGRG 1 cut(s) 742
Bsp1286I GDGCHC 2 cut(s) 749, 2741
Bsp143I GATC 8 cut(s) 496, 777, 1032, 1986, 2095, 2134, 2385, 2799
Bsp19I CCATGG 1 cut(s) 2359
BspACI CCGC 4 cut(s) 71, 1228, 1483, 2103
BspANI GGCC 2 cut(s) 489, 558
BspCNI CTCAG 3 cut(s) 85, 2019, 2564
BspLI GGNNCC 4 cut(s) 626, 1317, 2165, 2365
BspMI ACCTGC 1 cut(s) 243
BspPI GGATC 2 cut(s) 1027, 2393
BspQI GCTCTTC 1 cut(s) 2271
BspT107I GGYRCC 1 cut(s) 2363
BsrDI GCAATG 3 cut(s) 1485, 1980, 2312
BsrI ACTGG 4 cut(s) 84, 197, 938, 1023
BssECI CCNNGG 4 cut(s) 1756, 1968, 2159, 2359
BssMI GATC 8 cut(s) 496, 777, 1032, 1986, 2095, 2134, 2385, 2799
BssT1I CCWWGG 2 cut(s) 1968, 2359
Bst2UI CCWGG 1 cut(s) 137
Bst4CI ACNGT 2 cut(s) 1324, 2220
Bst6I CTCTTC 2 cut(s) 2271, 2604
BstC8I GCNNGC 3 cut(s) 122, 2070, 2597
BstDEI CTNAG 6 cut(s) 93, 1298, 1418, 1784, 2027, 2551
BstDSI CCRYGG 1 cut(s) 2359
BstENI CCTNNNNNAGG 1 cut(s) 642
BstF5I GGATG 7 cut(s) 633, 654, 663, 1237, 1407, 1903, 2871
BstKTI GATC 8 cut(s) 499, 780, 1035, 1989, 2098, 2137, 2388, 2802
BstMAI GTCTC 5 cut(s) 220, 745, 2554, 2820, 2887
BstMBI GATC 8 cut(s) 496, 777, 1032, 1986, 2095, 2134, 2385, 2799
BstMWI GCNNNNNNNGC 3 cut(s) 31, 137, 683
BstNI CCWGG 1 cut(s) 137
BstNSI RCATGY 1 cut(s) 2599
BstSCI CCNGG 4 cut(s) 135, 609, 1756, 2158
BstSFI CTRYAG 1 cut(s) 1634
BstSLI GKGCMC 1 cut(s) 2741
BstV1I GCAGC 5 cut(s) 129, 430, 1162, 2129, 2772
BstV2I GAAGAC 1 cut(s) 195
BstX2I RGATCY 1 cut(s) 2134
BstXI CCANNNNNNTGG 2 cut(s) 918, 1975
BstYI RGATCY 1 cut(s) 2134
Bsu36I CCTNAGG 1 cut(s) 1784
BsuRI GGCC 2 cut(s) 489, 558
BtgI CCRYGG 1 cut(s) 2359
BtgZI GCGATG 2 cut(s) 1069, 2454
BtsCI GGATG 7 cut(s) 633, 654, 663, 1237, 1407, 1903, 2871
BtsI GCAGTG 1 cut(s) 2753
BtsIMutI CAGTG 2 cut(s) 252, 2753
BveI ACCTGC 1 cut(s) 243
Cac8I GCNNGC 3 cut(s) 122, 2070, 2597
Cfr13I GGNCC 4 cut(s) 488, 1315, 1933, 2149
CseI GACGC 1 cut(s) 161
Csp6I GTAC 5 cut(s) 220, 1673, 2032, 2236, 2790
CspCI CAANNNNNGTGG 2 cut(s) 1815, 1850
CviAII CATG 8 cut(s) 340, 1030, 1544, 1556, 1692, 2146, 2360, 2596
CviQI GTAC 5 cut(s) 220, 1673, 2032, 2236, 2790
DdeI CTNAG 6 cut(s) 93, 1298, 1418, 1784, 2027, 2551
DpnI GATC 8 cut(s) 498, 779, 1034, 1988, 2097, 2136, 2387, 2801
DpnII GATC 8 cut(s) 496, 777, 1032, 1986, 2095, 2134, 2385, 2799
EaeI YGGCCR 1 cut(s) 556
Eam1104I CTCTTC 2 cut(s) 2271, 2604
EarI CTCTTC 2 cut(s) 2271, 2604
Eco130I CCWWGG 2 cut(s) 1968, 2359
Eco24I GRGCYC 1 cut(s) 749
Eco47I GGWCC 3 cut(s) 1315, 1933, 2149
Eco57I CTGAAG 2 cut(s) 27, 981
Eco81I CCTNAGG 1 cut(s) 1784
Eco88I CYCGRG 1 cut(s) 742
EcoNI CCTNNNNNAGG 1 cut(s) 642
EcoRI GAATTC 2 cut(s) 2495, 2556
EcoRII CCWGG 1 cut(s) 135
EcoT14I CCWWGG 2 cut(s) 1968, 2359
EcoT22I ATGCAT 2 cut(s) 1545, 1592
EcoT38I GRGCYC 1 cut(s) 749
ErhI CCWWGG 2 cut(s) 1968, 2359
Esp3I CGTCTC 1 cut(s) 2887
FaeI CATG 8 cut(s) 343, 1033, 1547, 1559, 1695, 2149, 2363, 2599
FalI AAGNNNNNCTT 4 cut(s) 860, 892, 1401, 1433
FaqI GGGAC 1 cut(s) 1301
FatI CATG 8 cut(s) 339, 1029, 1543, 1555, 1691, 2145, 2359, 2595
FauI CCCGC 1 cut(s) 1221
FbaI TGATCA 3 cut(s) 496, 1986, 2095
Fnu4HI GCNGC 5 cut(s) 118, 444, 1176, 2118, 2786
FokI GGATG 7 cut(s) 620, 661, 670, 1244, 1414, 1910, 2858
FriOI GRGCYC 1 cut(s) 749
Fsp4HI GCNGC 5 cut(s) 118, 444, 1176, 2118, 2786
FspBI CTAG 9 cut(s) 180, 239, 791, 887, 977, 1067, 1196, 1475, 2075
GluI GCNGC 5 cut(s) 118, 444, 1176, 2118, 2786
GsuI CTGGAG 1 cut(s) 50
HaeIII GGCC 2 cut(s) 489, 558
HapII CCGG 4 cut(s) 611, 1758, 1895, 2159
HgaI GACGC 1 cut(s) 161
Hin1II CATG 8 cut(s) 343, 1033, 1547, 1559, 1695, 2149, 2363, 2599
HincII GTYRAC 1 cut(s) 432
HindII GTYRAC 1 cut(s) 432
HpaI GTTAAC 1 cut(s) 432
HpaII CCGG 4 cut(s) 611, 1758, 1895, 2159
HphI GGTGA 8 cut(s) 85, 1148, 1567, 1625, 1652, 1850, 2117, 2303
Hpy166II GTNNAC 2 cut(s) 432, 477
Hpy188I TCNGA 7 cut(s) 1239, 1286, 2141, 2299, 2641, 2692, 2814
Hpy8I GTNNAC 2 cut(s) 432, 477
Hpy99I CGWCG 1 cut(s) 393
HpyAV CCTTC 9 cut(s) 286, 290, 319, 608, 956, 1739, 2612, 2654, 2842
HpyCH4III ACNGT 2 cut(s) 1324, 2220
HpyCH4IV ACGT 4 cut(s) 102, 858, 1506, 2880
HpyF10VI GCNNNNNNNGC 3 cut(s) 31, 137, 683
HpyF3I CTNAG 6 cut(s) 93, 1298, 1418, 1784, 2027, 2551
HpySE526I ACGT 4 cut(s) 102, 858, 1506, 2880
Hsp92II CATG 8 cut(s) 343, 1033, 1547, 1559, 1695, 2149, 2363, 2599
Ksp22I TGATCA 3 cut(s) 496, 1986, 2095
KspAI GTTAAC 1 cut(s) 432
Kzo9I GATC 8 cut(s) 496, 777, 1032, 1986, 2095, 2134, 2385, 2799
LguI GCTCTTC 1 cut(s) 2271
LmnI GCTCC 5 cut(s) 31, 313, 1127, 1630, 2163
Lsp1109I GCAGC 5 cut(s) 129, 430, 1162, 2129, 2772
LweI GCATC 5 cut(s) 166, 1092, 1691, 1888, 2008
MaeI CTAG 9 cut(s) 180, 239, 791, 887, 977, 1067, 1196, 1475, 2075
MaeII ACGT 4 cut(s) 102, 858, 1506, 2880
MaeIII GTNAC 7 cut(s) 313, 392, 703, 852, 979, 1404, 1694
MalI GATC 8 cut(s) 498, 779, 1034, 1988, 2097, 2136, 2387, 2801
MboI GATC 8 cut(s) 496, 777, 1032, 1986, 2095, 2134, 2385, 2799
MfeI CAATTG 3 cut(s) 35, 167, 2649
MflI RGATCY 1 cut(s) 2134
MhlI GDGCHC 2 cut(s) 749, 2741
MlyI GAGTC 5 cut(s) 796, 1480, 1960, 2072, 2366
MmeI TCCRAC 3 cut(s) 177, 807, 1309
Mph1103I ATGCAT 2 cut(s) 1545, 1592
MroXI GAANNNNTTC 2 cut(s) 1647, 1845
MseI TTAA 8 cut(s) 105, 431, 762, 839, 861, 1608, 1994, 2345
MslI CAYNNNNRTG 2 cut(s) 20, 2004
MspA1I CMGCKG 1 cut(s) 2895
MspI CCGG 4 cut(s) 611, 1758, 1895, 2159
MspR9I CCNGG 4 cut(s) 137, 611, 1758, 2160
MunI CAATTG 3 cut(s) 35, 167, 2649
Mva1269I GAATGC 2 cut(s) 94, 1592
MvaI CCWGG 1 cut(s) 137
MwoI GCNNNNNNNGC 3 cut(s) 31, 137, 683
NciI CCSGG 3 cut(s) 611, 1758, 2160
NcoI CCATGG 1 cut(s) 2359
NdeII GATC 8 cut(s) 496, 777, 1032, 1986, 2095, 2134, 2385, 2799
NlaIII CATG 8 cut(s) 343, 1033, 1547, 1559, 1695, 2149, 2363, 2599
NlaIV GGNNCC 4 cut(s) 626, 1317, 2165, 2365
NmeAIII GCCGAG 1 cut(s) 584
NmuCI GTSAC 4 cut(s) 852, 979, 1404, 1694
NsiI ATGCAT 2 cut(s) 1545, 1592
NspI RCATGY 1 cut(s) 2599
PaeI GCATGC 1 cut(s) 2599
PaeR7I CTCGAG 1 cut(s) 742
PciSI GCTCTTC 1 cut(s) 2271
PcsI WCGNNNNNNNCGW 2 cut(s) 228, 2017
PctI GAATGC 2 cut(s) 94, 1592
PdmI GAANNNNTTC 2 cut(s) 1647, 1845
PfeI GAWTC 8 cut(s) 1648, 1846, 2142, 2294, 2336, 2633, 2678, 2815
Pfl23II CGTACG 1 cut(s) 219
PkrI GCNGC 5 cut(s) 119, 445, 1177, 2119, 2787
PleI GAGTC 5 cut(s) 795, 1479, 1959, 2072, 2366
PpsI GAGTC 5 cut(s) 795, 1479, 1959, 2072, 2366
PshBI ATTAAT 1 cut(s) 2345
PsiI TTATAA 2 cut(s) 690, 1368
Psp6I CCWGG 1 cut(s) 135
PspGI CCWGG 1 cut(s) 135
PspLI CGTACG 1 cut(s) 219
PspN4I GGNNCC 4 cut(s) 626, 1317, 2165, 2365
PspPI GGNCC 4 cut(s) 488, 1315, 1933, 2149
PsuI RGATCY 1 cut(s) 2134
PvuII CAGCTG 1 cut(s) 2895
RsaI GTAC 5 cut(s) 221, 1674, 2033, 2237, 2791
RsaNI GTAC 5 cut(s) 220, 1673, 2032, 2236, 2790
RseI CAYNNNNRTG 2 cut(s) 20, 2004
SapI GCTCTTC 1 cut(s) 2271
SaqAI TTAA 8 cut(s) 105, 431, 762, 839, 861, 1608, 1994, 2345
SatI GCNGC 5 cut(s) 118, 444, 1176, 2118, 2786
Sau3AI GATC 8 cut(s) 496, 777, 1032, 1986, 2095, 2134, 2385, 2799
Sau96I GGNCC 4 cut(s) 488, 1315, 1933, 2149
SchI GAGTC 5 cut(s) 796, 1480, 1960, 2072, 2366
ScrFI CCNGG 4 cut(s) 137, 611, 1758, 2160
SduI GDGCHC 2 cut(s) 749, 2741
SfaNI GCATC 5 cut(s) 166, 1092, 1691, 1888, 2008
SfcI CTRYAG 1 cut(s) 1634
Sfr274I CTCGAG 1 cut(s) 742
SinI GGWCC 3 cut(s) 1315, 1933, 2149
SlaI CTCGAG 1 cut(s) 742
SmiMI CAYNNNNRTG 2 cut(s) 20, 2004
SmlI CTYRAG 3 cut(s) 146, 742, 1955
SmoI CTYRAG 3 cut(s) 146, 742, 1955
SpeI ACTAGT 1 cut(s) 976
SphI GCATGC 1 cut(s) 2599
SsiI CCGC 4 cut(s) 71, 1228, 1483, 2103
SspI AATATT 3 cut(s) 1460, 1525, 2435
SspMI CTAG 9 cut(s) 180, 239, 791, 887, 977, 1067, 1196, 1475, 2075
StyD4I CCNGG 4 cut(s) 135, 609, 1756, 2158
StyI CCWWGG 2 cut(s) 1968, 2359
TaaI ACNGT 2 cut(s) 1324, 2220
TaiI ACGT 4 cut(s) 105, 861, 1509, 2883
TaqI TCGA 4 cut(s) 537, 743, 2262, 2820
TfiI GAWTC 8 cut(s) 1648, 1846, 2142, 2294, 2336, 2633, 2678, 2815
Tru1I TTAA 8 cut(s) 105, 431, 762, 839, 861, 1608, 1994, 2345
Tru9I TTAA 8 cut(s) 105, 431, 762, 839, 861, 1608, 1994, 2345
TscAI CASTG 2 cut(s) 259, 2760
TseFI GTSAC 4 cut(s) 852, 979, 1404, 1694
TseI GCWGC 5 cut(s) 117, 443, 1175, 2117, 2785
Tsp45I GTSAC 4 cut(s) 852, 979, 1404, 1694
TspGWI ACGGA 1 cut(s) 10
TspRI CASTG 2 cut(s) 259, 2760
VpaK11BI GGWCC 3 cut(s) 1315, 1933, 2149
VspI ATTAAT 1 cut(s) 2345
XagI CCTNNNNNAGG 1 cut(s) 642
XapI RAATTY 8 cut(s) 258, 1679, 1795, 2329, 2478, 2495, 2525, 2556
XbaI TCTAGA 1 cut(s) 790
XceI RCATGY 1 cut(s) 2599
XhoI CTCGAG 1 cut(s) 742
XmnI GAANNNNTTC 2 cut(s) 1647, 1845
XspI CTAG 9 cut(s) 180, 239, 791, 887, 977, 1067, 1196, 1475, 2075
Zsp2I ATGCAT 2 cut(s) 1545, 1592
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.