RchiOBHm_Chr2g0172841

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0001371
Physical Location & Seq
Forward (+)
86071366 .. 86083699
12334 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54011

Sequence Viewer

Length: 8721 bp
ATGGCAACGGAAGCTGATGTTCCAGAAGCTATATGTATCGCGAAAGGAGAAGGGGTAGACAGAAGCGTGCCAATCGAACAGTTGCACAGAACTGTCGACCAATGTTCTCCAGTTGAATTGAATAAATCCAAAGGTGACTTGGATCAGCATCCTGAAACTCACACTGACAAACCTTTTGCAGATGGTGAAAATGTACAGGTAGAATATAGTATGAAAGTTGAAAGCAAGAATGACAGCTTTGGAATTTCAGAGGGTGAACATTTTTTGGACCCACTCTCGGAGATTTCCCAAGCCGGCCAATCAAATCAAGCAGGAATGGAGATACCAAAGAATGAAGCGCAGCTTCAGAAAGGCACACAAGTTGGTGAGGGAGTACAAGAAACAGGCACTGAAGAAAATGAAGTCATTGAAGAAAGACAGGAGAAGTTCGAACAAGATATTGAAAAGCATGACATTGTAAATGCTGCAGGAATCATTTCAGAGATCGCGAAAACTGGAGATGCAAACCTCGAAGTTGAAGAAGTGGAAGCATCAACAAATGAGACAACTGTTGATCAACATGTTCAAGTAATCTCAAATCAACAGGACTCCATCAAAGAAGATGTACAGTGTCTTGAAAAGGAGGCAGAGAGTTCAGAGGTAGATACAAAAGGAGCAGAAAAGGCACATGGCAATGCTGAATCATACAGTAAAGAAGCTTCCGATCTGCTAGAGGCAACCACATTTCAGGAGTACGAAGCTTCAACTTCTATTCTTGATTTGACGAACAGCCGCCTCAAGAAGGACATGGAATTGGAGACAAATGTACACAATTCCTCCGATACAAATCCCATATTACAAGAAGAATTTGAAGAAGGAACTAGCACAAAGGTAACATCAAATGACGAAGAAGATTCACAGCAGACATTGCAGAATTATGAACTGAAAGAGGAGCTTCAAAAATTGCCAGAGGTGACGCCTGAAGATGCTAAGACAGAATCAGCAATGGAGAATGCAGAAGTAATATCCTGCACAGAACAGGAAAGAACAATGCAGAGCACACCAGAATACTCGGAGAAAGAAGAGGCAAACCCTGTGCATTGTCCAAAAGAAAATGCCACTATGACTGAGGAGGTGTTTGAGGCTGCAAGCACAGAACAAGAAACTGCAGAACATGCATTACCAGAAATCCATACTGCTGAGAACCACCCTCAAGAGTTCAATGAAGAAAAATCCAGAGATTATCAGGCATCCGTTGAGGCAGCTTACTTGAGTACACATGCAGATGAAAAGAACTTGGAGGAACAAGCCATTCAAGAAAAGTCTTCTTCATTGGTAGAAGAAGAAACAACTCAGCAAATCTCAAGGGAAGAAGAAGTGCACGCAACAAATTCAAAAGAAGAGGAAAAGGAAGCAGATACAAAATGCGAAGAGCCCATTGAAGTAGCAGATGCTACAAGAGAAATAGAATTTGAAACCATAGAGCAGAGAACAGAGACAAATAAAGACCTCAATGTTCCAATTCCAGAGGAAGAAGCCTATGCAGAGGAAAGCACCAAAGCATTTGTTCAAAATAACTCCTTTCTCTCTGAGGTATCTGAAGTAAAGACCAAGGAAATTATTCAGGAGGATCAACCCACAGTAGGCGATTATGGCCTTGTGTCTGGAGAATTGAGTCAAGTATCAGCATCGAAGGAAGCTGAAGCTGAAAACGAGGGGCATGTCAACAATACTCCTGAAGAAATGGGACTACAAACCATCTTAACAGATGAGACGGTCGTGGAAACCGAAGATCATGCACAAGCAGGGGAAAATCTTACCTCAAAAGAGAAGATAGAAAAGGAGATTCAAACAGCAGAAGGTGAAGGGGAAAGAGACTTGAAAGAAATCAAAGAAGAAAACAAGGAGCCTGTAGATAATGCTGATATTGCTCCTGAAGAGGATCTAGCAACCATCTTAACTGATCAACCAGCCTTGCAAATTGAAGATATTAAGCTACAAGCAGAAGAAAGCGTTGACTCAAAAGATAAATCGGAGGAACAAATTCTGACAGCTGCAGATGAAGGTGGAAATGGTTTGATAGAAGCACAAACAGAAAACAATGAGCAGGTTACAGATGCTGATATTGCTTCTGAAGAGAAGGGTCTAGAAACCATTTTAACAGATGAAACGGCCCTAGATATTAAAGATATCGATGTACAAGCAGAGAAAGATTTCAGGTCAAAAGAGAGCTCGGAGAAGCAGGTTCCAGTAGTAGCAGATGAAGGTGACACGTTCTTGAAGGAAGCTGAAGAAGAGAAGGAGCAGGAGGCTCTACCTACCATCTTAAAAGGTGAACCACCATTGGACATTGAAGTTATTGATGTACAAGCAGAGGAAAGTTTCAGTCCTCAAGAGAAGTTGGAGGAGCTGATTCCAGCAGTAGCAGATGAAGGTGACACAGGCTTGAAGGAAGCCGAAGAAGAGAACAAGGAGCAGGTCAAAATTACTGACAGTGCTCCTGAAGTGAAGGTTACCATCGGCGAAAGAGCCTTGGACAATGAAGATATTGAGTTACAAGTAGAGGAAAATGTCAGCTCAAAAGATAACTTGGAGAAGCAGATTCCAACAACAGCACTCGAAGGTGACTCAGGCTTGAAGGAACCCGAAGAAGAAAACGAGCTGGTCAAAAGCATTGATATTTCTACTGAAGAGAAGGGTCCAGCAACCATCTTAACAGATGAAACAACCCACAATGCTGAAGATACTGATGTAAAAGCAAGCAAATATATCAAATCAAAAGATATTGAGGGTGAAAGTTGCTCCACGGAACCCCAAGAAGAAAACAAGGAGAAAGTCACATATATTGGCATTACTCCTGAAGAGACAATTTTAAACTCACAAGAGAAACTGGAGGAGCAGGTTCCAGAAGTAGCAGAGGAAGGTGACACGGGCTTGAATGAAGCTGAAGAAGAAAACAAGGAGCAGATCAAAAGTAAAGATACCTCTCCTGAAGAGAAGGGTCTACAAATCATCTCAACAGATGACACGGCATTGGACAGTGTCAAAATTGAGTTACAATCAGAGGAAAATGTCAGCTCAACAGATAACTTGGAGAAGCAAATTCCAACAGAAGAAGCTGAACGTGGCTTAACAGAAGCTGAAGCAGAAAACAAGGAGCAGGCCACCATTACTGATATTACTCCTGAAGTGAAAAGTGTACCGACCACCTTGACAGATCAAACAGCCTTGGACAGTGAAAAAATTGAGTTGCATGCAGAGGAAAAAGTCAACTCAACAGATTACTTGGAGAAGCAAATTCCAACAGCAGCAGATGAAGGTGAAGATATCTTGACAGAAGCCAAAGCAGAAAGCAAGGAGCAGGTCACCATTAATGATATTACTCCTGAAGAGAAGGGTGTAGCAACCATCTTAACAGATGAAAGATCCTTGGAAATTGAGGATATCGATGAACAAGCAGAGGAATCTTCTAACTCAAAAGAGAACTTGGAGGAGGAGATTTCAGCAGCACCAGTATTGGGTGAAACATGCGTGAAGGAAGACGAAGAGGAGAGCACGGAGCAGGTCAAAAGCAGTAATAGCTCTCATGAAGGAAAGGGTCTGGCAACCATCTTAACAGAAGAAACGACCCAAGACATTGAATATACTGATGTAAAAGCAGGAGCGGATTTCAACTCGGGAGATATTTTGGAGAAGCAGATTCCAACAGCTGTTTATGAAGGTGAAACAGACTCGAAGGAAGTGGAAGCAGAAAATAAGGAGCAGGTAGAAACTACTGAGATAGCTCCTGAAGAGAAAGGTCTGGCAACCATCTTAATTGATGAAACTGCCGAGGGCATTGAAGTTATTGATGTACAAGCAGGGGAAATCAACTTGAAAGAGGTCTTGGAGAAGCAGATTCCAACAGCTGTAGATGAAGGTGAAACAGACCTAAAGGAAGCTGAAGCAGACATCAAGGAGCAGGTAGAGACTACTGATATTGTTCCTGAACAAAAGGGTGTAGACACCATCTTAAGCGATGAAAGGGCCCTGGACCTTGAAGACGTTCATGTACAAGAACAAGAGAATTTCAACTCTAATGAGAACTTGGAAAGTCAGATTCCAACAACAGTAGGTGAAGGTGAAACAGACTTGAATGAAGGGGAAGCTGAAATCAAGGAGCAGGTAAAATGTACTGAAACTGCTGTTGAAGAGAAGGATGCAACAACCATCTTAAGAGATGAAACAGTCGTGGAGGTTCAAGATGTTGATATAAAAGCAGAGGAAAAACCAATAGAAGCAGGTGAAGGTGAAAAGAAGGTGGGAATTCTTGATGACATCCCTGTTAATGTCTATAACACAGAACTGGTGGAAGAGGTGACCGTGGAGCAAAGCTATCAAGTGCCAAGTCATGAGGAAGCAGAACCAAAAATCGCAGTTGAAGATGAGAAATCAGAAGACCATCCTGAAAGGAATCACATGATAGTTGAAGAGGTCATTGATGAACCAAAGATCACAAGTCGAGATTTCAGTGAAGAACAAATCATAGAAGGCAATGTCGTGAGTTTTACACCAGAATCAATCGAAGAAGATACAGTTAAGAGCTCTCAAGACAATGAGAAAGAGACAATAGAGTTGAAGGAAGAGGGCAGTTGTACAGAGAATGCAAAAGATGAAAATGCTAGTGACCTCACACGGGAGTATATTCCAGAAGATGCACCAAAGCAGATCATAGATGAACAGTATAATGCAGTCAAGTCCGAAAACAAGATTCTTGAAGATTCACAGACTATTGAGGTAGATGAGAGCAGCACATGTGAGACAAAAAATATCGAAAAATCTGAAGAAATTCCTAGTACATTACCAGTGCAATATGAAGAAGTTCAGCAGGGAGAGGAGAGCTGTACAGAGAGCACAAAAGAGGAAAATGCTAGTGACCACACACGAGAGTATGTTCCAGAAGATGCTACTGAGCAGATCAAAGATGAAGACTGTAACACAGTAGAGTCCAAAAACGAGGTTCTTGAAGATTCACAAATTGTTGAGGTAGATGAGAGCACCACATGTGAGACAAAGAATCTTGAAACAACTGAAGAAATTCCTAGTACATTACCAGTGAAATATGATGAAGTTCTGCAGGGAGAGGGGAGCTATACAGAAAGCCCAAAAGAGGAAAATGCTAGTGACCTCACACGGGAATATGTTCCAGAAGATGCTACTGAGCAGATCAAAGATGAAGACTGTAATGCAGTCAAGTCCAAAAACGAGATTCTTGAAGATTCACAGACTGTTGAGGTAGATGAGAGCACCACATGTGAGACAAAGAATCTCGAAAGATCTGAAGAAATTCTTAGTACATTACCAGTGAAATATGATGAAGTTCAGCAGGGGGAAGGCAGCAGCCCAGCTCCAGCAGAACCTTTGAAGGAGGAGGACACATTGTCTGTGCTAGTGGCTAAAGATGATGATGGCGATAGTGGTGCAGTCACTAATACAGAAACGGATGCAAAAGTACCACCAAATGATGAAGAAGATTCACCAGAGGTGTTGCAGAAATATGAACCAGAAGAGGAGATTACGGAATTGCCACATGTGAAACCTGAAGAAACTACACCAGAATCGTCAAGTGAAAATGCAGAAGTTATTACCTGCAGAAAAGAGGAAATACAAGAATCATTGGACAAAGAAAAGGATACAAAAGAAAGTGACACTTCATCAGGGGAGGTGTTGGAGACTACAATTACAGAAGCATTACCGGAAATTCATACCGTTGAGGACACTGCAGAGAGGGCCACAGAATATCAGGCATGTATTGAGGCAGCTGAGTTGAGTACAGAAGGAGAAAAGGAGAACTCAGAGGAACAAACAACTCGAGAAGTCTCTTCTTCACTGATAGTAGAAACAAGTGAGGAAAGCTCAAAGGAAGAAGAAGAGAAAAATGAAGGACAAGTAGAATGTAAAGATTCAATTGAGGAAGTAATATCTGAAACCTTAGAGGACACAACAGAGCCAAAACCAATTTCAGAGGAAGAAAGCAACAAATCACTTGTTCAAGATAATTCCTTTTCACTGGAGGCATCAGAGAAAGAGATTGAAAAAGAGATTCAGGGGGAGTATAGCTCCACAGTAAGAAGTTTTGACTCCAAAGTTGTGAGTGATGAAACAGGCTTGACGGAAGCCACAACCGAAGACAAAGGGCAGGTGAAAACTACTCACATTTCTTCTGAAGAGAAGGACAATGAAGGTACTGATGTCCACAACACTGAACTGGTCCGAGAAACAGTAGTAGAACCAAGCTTTCAAGTGCAAACTCTTGAAGATGAAGCAGCACCAAAATTGGAAGTTGAAGATGAAACTGATAAATCAGATGATCTTCCTGAGAAAAATAACAAGATTTGTGAAGAAGAGGTACATGATGGACCAAAGATCACAGACAGAGATTTCAATGAAGAACAAATCACAGAAGCAAACGTCGCAAATCTTACAACTGAACCAGTTCAGGAACAAGAGATGGTTAAGGACTATCAAGCCGAGGAAAGGGAGACGGAAAGGTTAAATGAGGAGGGAAGCAGTATAGAGAACATAAAAGAAGGCAATGCCAGTGACATTTCAACTGAGTGTGTTCCAGAGGATATAGACGAAAAGCTTAAAGAATGCATAGAGGAGGCAGTTGAGTCCAAAGAGCAAATCATAGAAGCCAAAGCCGTGAGTTTTACACCAGAGTCCATTGAAGATGATACGGTTAAGAACTCTCAAGACAGTGAAAAAGAGACAATAGAGCTAAAGGAAGAGGAGAGCTGTACAGAGAGCATAAAAGAAGAAAATGCTAGTGAACTCTCACCAGAGTACATTCAAGAAGATGGAAGCAAAAATTTCAAAGATGACAAGGAGGATGCATTGAAATCCGAAGAGGAGATTCTTGAAGATTCACAGACTGTGGGTGTAGTTGAGAGCACTACATGTGAGACAGTTAATGTCGAAAGATCTGAAGACATTCTTATTGCATTACCAGCGAAATATGATGAGGGGAGCAGCCCTGCTCCAACAGAAGCTTCGAAGCAGGAGAATATTGATGAGGACACATCTTCTGTCCAAGAGACTAAAGACAAGGATGTTGAAGTTACTGTTACCGAAACAAGTGCAGAGGCACCATCAAATGATGAAGATGATTCACCACAGGTCTTACAGAAATATGAACCAGAAGAGGAACTTACAATATTGCGAGATGCGCAGCCTGAAGAAATGAAGCCAGAACCATCAAGTGAAATTGAAGAAGTAATAACCTGCACAAAAGAGGAAACACAAGAATCCTTGGACAATGAAAATGATACAAAAGAAAGTGACGCTTCAACTGGAGAGGCATGTATTGAAGCAGCTGAGTTGAGTACAGAAGGAGAAAAAGAGGAACAGACCACTCAAGAAGTCTCCTCTTCTCCGATAGGAGAAGAAACAACTGAGGAAAGCTCAAAGGAAGAAGAGAAAAAGGAAGCACATGAAGAATGTAAAGAGGCCATTGAGGGAGAGAGCTCCTTTTTGTCACAAGCATCGGAGAAAGAGATTAAAAAAGAGATTCAGGGGGAGTATGGCTCCACTGTAAGAAGTTTTGACTCCGAAGTTGCGAGTGATGAAAGGGGCTTGACAGAAGCCACAGAGCAGGTAGAAACTACTCACATTGCTCCTGAAGAGAAGGACATTGGAGGTAAAGATGTCTACAACACTGGACTTGTTGGAGAAATGGTAGAACCAAGCTCTCAAGTGCAAACTCTTGAAGAAGAAGTGGAAATGAAATTGGAAGTTGAAGATGAGACTGACAAATCAGATGATCATCCTGAAAAGGGTGACAAGATTTGTGAAGAGGTTCTTGATGAACCAAAGATCACAGACACAGATTTTCATGAAGAACAAATCACAGAGGGAAATGTCGCAAGCTGTGCAAGTGAATCAGTTGAGGAAGGAACTGTTAAAGACTATCAAGCTGACGAAAAAGAGAGAGGGAGTGATGAAACGAGCTTGATGGTAGCCACAACAGAAGACAAAGAGCAGGTGGAAACTACTCAGATTGCTCCTGAAGAGAAGTACAATGAAGGTACTGATGTCTACAACACTGAACTGGTTGGAGAAACGGTAGAACCAAGCTTTCAAGGGCAAACTCTTGAAGAAGAAGCAACACCAAAATTAGAAGTTGAAGATGATACTGACAAATCAGATGATCTTCCTGAGAAGAATAACAAGATTTGTGAAGAGGTACCTGATGAACCAAAGATCACAGACAGAGATTTCAATGAAGAACAAATCACAGAAGGAATTGTCACAAATCTTACAACTGAACCAATTGAGGAACAAGAGATGGTTAAGGACTATCAAGGCAAGGAAAGGGAGACAGAAAGGTCAAATGAGGAGGGAAGCAGTATAGAGAACATAAAAGAAAGCAATGCCAATGACATTTCAACTGAGTGTGTTCCAGAGGATACAGGTGAAAAGCTTAAAGAATGCATAGAGGAGGCAGTTGAGTCCAAAGAACAAATCATAGAAGGCAATTTTGTGACTTCCACACCAGAATTGATTGAAGAAGATGCAGTTGAGAACTCTCAAGACAGTGAAAAAGACACAATAGAGCTAAAGGAAGTGGGGACATGTACAGAGAGAATAAAAGAAGAAAATGCCACCGAACTCTCACCAGAGTACATTCAAGAAGATGGAAGTAAAAAGTTCAATGGTGACAAGGAGGATGCGTTGAAGTCTGAAGAGCAGGTCAGCTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

2906

Amino Acids

323.1

Weight (kDa)

4.05

Isoelectric Point (pI)

63.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 8719
AarI CACCTGC 3 cut(s) 4250, 6148, 7990
AasI GACNNNNNNGTC 1 cut(s) 8344
Acc16I TGCGCA 1 cut(s) 7188
Acc65I GGTACC 1 cut(s) 8203
AccB1I GGYRCC 2 cut(s) 7105, 8203
AccBSI CCGCTC 1 cut(s) 3644
AccI GTMKAC 6 cut(s) 57, 96, 2983, 3981, 7668, 8055
AccII CGCG 2 cut(s) 41, 488
AciI CCGC 2 cut(s) 772, 3644
AclWI GGATC 4 cut(s) 150, 1617, 1929, 3399
AcoI YGGCCR 1 cut(s) 295
AcyI GRCGYC 1 cut(s) 956
AfiI CCNNNNNNNGG 9 cut(s) 277, 781, 1622, 3497, 4654, 5128, 5152, 6495, 7793
AflII CTTAAG 2 cut(s) 3991, 4192
AflIII ACRYGT 8 cut(s) 559, 2250, 4772, 5021, 5270, 5548, 6917, 8591
AhdI GACNNNNNGTC 1 cut(s) 5398
AjnI CCWGG 1 cut(s) 4008
AjuI GAANNNNNNNTTGG 6 cut(s) 3848, 3880, 5962, 5994, 6994, 7026
Alw44I GTGCAC 1 cut(s) 1358
AlwI GGATC 4 cut(s) 150, 1617, 1929, 3399
AlwNI CAGNNNCTG 3 cut(s) 389, 2099, 3119
Ama87I CYCGRG 2 cut(s) 3655, 5829
AoxI GGCC 7 cut(s) 295, 1633, 2151, 3141, 4005, 5748, 7467
ApaI GGGCCC 1 cut(s) 4009
ApaLI GTGCAC 1 cut(s) 1358
ArsI GACNNNNNNTTYG 2 cut(s) 158, 190
AseI ATTAAT 1 cut(s) 3351
Asp718I GGTACC 1 cut(s) 8203
AspLEI GCGC 2 cut(s) 340, 7189
AspS9I GGNCC 9 cut(s) 268, 2152, 2678, 4005, 4006, 4012, 5748, 6229, 6377
AsuII TTCGAA 2 cut(s) 429, 7013
AvaI CYCGRG 2 cut(s) 3655, 5829
AvaII GGWCC 5 cut(s) 268, 2678, 4012, 6229, 6377
BaeGI GKGCMC 2 cut(s) 1362, 4009
BaeI ACNNNNGTAYC 6 cut(s) 2715, 2748, 6195, 6228, 8037, 8070
BanI GGYRCC 2 cut(s) 7105, 8203
BanII GRGCYC 5 cut(s) 1416, 2213, 4009, 4565, 7487
BarI GAAGNNNNNNTAC 4 cut(s) 682, 714, 6351, 6383
BauI CACGAG 1 cut(s) 4902
BbsI GAAGAC 9 cut(s) 1296, 3525, 4026, 4422, 4953, 5202, 6153, 6954, 7995
BceAI ACGGC 3 cut(s) 2166, 3024, 6647
BcgI CGANNNNNNTGC 6 cut(s) 1757, 1791, 5420, 5454, 7079, 7113
BciT130I CCWGG 1 cut(s) 4010
BciVI GTATCC 2 cut(s) 5644, 8419
BclI TGATCA 3 cut(s) 553, 1942, 7780
BfmI CTRYAG 8 cut(s) 465, 1146, 1890, 2034, 3888, 5093, 5608, 5739
BfrI CTTAAG 2 cut(s) 3991, 4192
BfuI GTATCC 2 cut(s) 5644, 8419
BglII AGATCT 2 cut(s) 5294, 6941
Bme1390I CCNGG 1 cut(s) 4010
Bme18I GGWCC 5 cut(s) 268, 2678, 4012, 6229, 6377
BmeRI GACNNNNNGTC 1 cut(s) 5398
BmeT110I CYCGRG 2 cut(s) 3655, 5829
BmgT120I GGNCC 9 cut(s) 268, 2152, 2678, 4005, 4006, 4012, 5748, 6229, 6377
BmrFI CCNGG 1 cut(s) 4010
BpiI GAAGAC 9 cut(s) 1296, 3525, 4026, 4422, 4953, 5202, 6153, 6954, 7995
BplI GAGNNNNNCTC 8 cut(s) 5858, 5890, 6062, 6094, 7406, 7438, 7529, 7561
BpmI CTGGAG 7 cut(s) 93, 516, 1665, 2891, 5352, 6050, 7332
Bpu14I TTCGAA 2 cut(s) 429, 7013
Bsa29I ATCGAT 2 cut(s) 2172, 3426
BsaBI GATNNNNATC 3 cut(s) 147, 825, 7782
BsaHI GRCGYC 1 cut(s) 956
BsaWI WCCGGW 1 cut(s) 5713
Bsc4I CCNNNNNNNGG 9 cut(s) 277, 781, 1622, 3497, 4654, 5128, 5152, 6495, 7793
Bse118I RCCGGY 1 cut(s) 293
Bse3DI GCAATG 7 cut(s) 679, 905, 990, 4519, 6559, 7629, 8395
Bse8I GATNNNNATC 3 cut(s) 147, 825, 7782
BseBI CCWGG 1 cut(s) 4010
BseCI ATCGAT 2 cut(s) 2172, 3426
BseJI GATNNNNATC 3 cut(s) 147, 825, 7782
BseLI CCNNNNNNNGG 9 cut(s) 277, 781, 1622, 3497, 4654, 5128, 5152, 6495, 7793
BseMI GCAATG 7 cut(s) 679, 905, 990, 4519, 6559, 7629, 8395
BseSI GKGCMC 2 cut(s) 1362, 4009
BseYI CCCAGC 1 cut(s) 5362
BsgI GTGCAG 4 cut(s) 994, 5460, 7119, 7228
Bsh1236I CGCG 2 cut(s) 41, 488
Bsh1285I CGRYCG 1 cut(s) 1758
BshFI GGCC 7 cut(s) 297, 1635, 2153, 3143, 4007, 5750, 7469
BshNI GGYRCC 2 cut(s) 7105, 8203
BshVI ATCGAT 2 cut(s) 2172, 3426
BsiEI CGRYCG 1 cut(s) 1758
BsiHKCI CYCGRG 2 cut(s) 3655, 5829
BsiSI CCGG 2 cut(s) 294, 5714
BslFI GGGAC 2 cut(s) 1740, 8602
BslI CCNNNNNNNGG 9 cut(s) 277, 781, 1622, 3497, 4654, 5128, 5152, 6495, 7793
BsmBI CGTCTC 2 cut(s) 1745, 6494
BsmFI GGGAC 2 cut(s) 1740, 8602
BsmI GAATGC 4 cut(s) 997, 4627, 6617, 8453
BsnI GGCC 7 cut(s) 297, 1635, 2153, 3143, 4007, 5750, 7469
BsoBI CYCGRG 2 cut(s) 3655, 5829
Bsp119I TTCGAA 2 cut(s) 429, 7013
Bsp120I GGGCCC 1 cut(s) 4005
Bsp68I TCGCGA 2 cut(s) 41, 488
BspACI CCGC 2 cut(s) 772, 3644
BspANI GGCC 7 cut(s) 297, 1635, 2153, 3143, 4007, 5750, 7469
BspDI ATCGAT 2 cut(s) 2172, 3426
BspFNI CGCG 2 cut(s) 41, 488
BspHI TCATGA 3 cut(s) 3565, 4369, 7852
BspMAI CTGCAG 6 cut(s) 469, 1150, 2038, 5097, 5612, 5743
BspPI GGATC 4 cut(s) 150, 1617, 1929, 3399
BspQI GCTCTTC 2 cut(s) 1404, 8697
BspT104I TTCGAA 2 cut(s) 429, 7013
BspT107I GGYRCC 2 cut(s) 7105, 8203
BspTI CTTAAG 2 cut(s) 3991, 4192
BsrBI CCGCTC 1 cut(s) 3644
BsrDI GCAATG 7 cut(s) 679, 905, 990, 4519, 6559, 7629, 8395
BsrFI RCCGGY 1 cut(s) 293
BssAI RCCGGY 1 cut(s) 293
BssNI GRCGYC 1 cut(s) 956
BssSI CACGAG 1 cut(s) 4902
BssT1I CCWWGG 5 cut(s) 1590, 2511, 3207, 3408, 7269
Bst2BI CACGAG 1 cut(s) 4902
Bst2UI CCWGG 1 cut(s) 4010
BstACI GRCGYC 1 cut(s) 956
BstAFI CTTAAG 2 cut(s) 3991, 4192
BstAPI GCANNNNNTGC 3 cut(s) 907, 1154, 7889
BstBI TTCGAA 2 cut(s) 429, 7013
BstC8I GCNNGC 8 cut(s) 68, 295, 1129, 1362, 2740, 3141, 3234, 7885
BstDSI CCRYGG 2 cut(s) 2784, 4341
BstEII GGTNACC 3 cut(s) 2491, 3343, 4336
BstENI CCTNNNNNAGG 1 cut(s) 779
BstFNI CGCG 2 cut(s) 41, 488
BstHHI GCGC 2 cut(s) 340, 7189
BstMCI CGRYCG 1 cut(s) 1758
BstNI CCWGG 1 cut(s) 4010
BstPI GGTNACC 3 cut(s) 2491, 3343, 4336
BstSCI CCNGG 1 cut(s) 4008
BstSFI CTRYAG 8 cut(s) 465, 1146, 1890, 2034, 3888, 5093, 5608, 5739
BstSLI GKGCMC 2 cut(s) 1362, 4009
BstUI CGCG 2 cut(s) 41, 488
BstV2I GAAGAC 9 cut(s) 1296, 3525, 4026, 4422, 4953, 5202, 6153, 6954, 7995
BstX2I RGATCY 4 cut(s) 1921, 3404, 5294, 6941
BstYI RGATCY 4 cut(s) 1921, 3404, 5294, 6941
Bsu15I ATCGAT 2 cut(s) 2172, 3426
BsuI GTATCC 2 cut(s) 5644, 8419
BsuRI GGCC 7 cut(s) 297, 1635, 2153, 3143, 4007, 5750, 7469
BsuTUI ATCGAT 2 cut(s) 2172, 3426
BtgI CCRYGG 2 cut(s) 2784, 4341
BtgZI GCGATG 1 cut(s) 4011
BtsI GCAGTG 1 cut(s) 5736
BtuMI TCGCGA 2 cut(s) 41, 488
Cac8I GCNNGC 8 cut(s) 68, 295, 1129, 1362, 2740, 3141, 3234, 7885
CaiI CAGNNNCTG 3 cut(s) 389, 2099, 3119
CciI TCATGA 3 cut(s) 3565, 4369, 7852
CfoI GCGC 2 cut(s) 340, 7189
Cfr10I RCCGGY 1 cut(s) 293
Cfr13I GGNCC 9 cut(s) 268, 2152, 2678, 4005, 4006, 4012, 5748, 6229, 6377
ClaI ATCGAT 2 cut(s) 2172, 3426
CseI GACGC 2 cut(s) 964, 7310
DraI TTTAAA 1 cut(s) 2853
DrdI GACNNNNNNGTC 1 cut(s) 8344
DriI GACNNNNNGTC 1 cut(s) 5398
DseDI GACNNNNNNGTC 1 cut(s) 8344
EaeI YGGCCR 1 cut(s) 295
Eam1105I GACNNNNNGTC 1 cut(s) 5398
Ecl136II GAGCTC 3 cut(s) 2211, 4563, 7485
Eco130I CCWWGG 5 cut(s) 1590, 2511, 3207, 3408, 7269
Eco24I GRGCYC 5 cut(s) 1416, 2213, 4009, 4565, 7487
Eco32I GATATC 3 cut(s) 2170, 3307, 3424
Eco47I GGWCC 5 cut(s) 268, 2678, 4012, 6229, 6377
Eco53kI GAGCTC 3 cut(s) 2211, 4563, 7485
Eco88I CYCGRG 2 cut(s) 3655, 5829
Eco91I GGTNACC 3 cut(s) 2491, 3343, 4336
EcoICRI GAGCTC 3 cut(s) 2211, 4563, 7485
EcoNI CCTNNNNNAGG 1 cut(s) 779
EcoO109I RGGNCCY 2 cut(s) 4005, 4006
EcoO65I GGTNACC 3 cut(s) 2491, 3343, 4336
EcoRI GAATTC 1 cut(s) 4284
EcoRII CCWGG 1 cut(s) 4008
EcoRV GATATC 3 cut(s) 2170, 3307, 3424
EcoT14I CCWWGG 5 cut(s) 1590, 2511, 3207, 3408, 7269
EcoT22I ATGCAT 4 cut(s) 1159, 6617, 6856, 8453
EcoT38I GRGCYC 5 cut(s) 1416, 2213, 4009, 4565, 7487
ErhI CCWWGG 5 cut(s) 1590, 2511, 3207, 3408, 7269
Esp3I CGTCTC 2 cut(s) 1745, 6494
FaqI GGGAC 2 cut(s) 1740, 8602
FbaI TGATCA 3 cut(s) 553, 1942, 7780
FblI GTMKAC 6 cut(s) 57, 96, 2983, 3981, 7668, 8055
FriOI GRGCYC 5 cut(s) 1416, 2213, 4009, 4565, 7487
FspI TGCGCA 1 cut(s) 7188
GlaI GCGC 2 cut(s) 339, 7188
GsaI CCCAGC 1 cut(s) 5366
GsuI CTGGAG 7 cut(s) 93, 516, 1665, 2891, 5352, 6050, 7332
HaeIII GGCC 7 cut(s) 297, 1635, 2153, 3143, 4007, 5750, 7469
HapII CCGG 2 cut(s) 294, 5714
HgaI GACGC 2 cut(s) 964, 7310
HhaI GCGC 2 cut(s) 340, 7189
Hin1I GRCGYC 1 cut(s) 956
Hin6I GCGC 2 cut(s) 338, 7187
HinP1I GCGC 2 cut(s) 338, 7187
HincII GTYRAC 4 cut(s) 97, 1705, 1996, 3250
HindII GTYRAC 4 cut(s) 97, 1705, 1996, 3250
HindIII AAGCTT 7 cut(s) 696, 738, 6253, 6602, 7008, 8092, 8438
HpaII CCGG 2 cut(s) 294, 5714
Hpy99I CGWCG 1 cut(s) 6434
HpyCH4IV ACGT 4 cut(s) 2252, 3103, 4023, 6429
HpySE526I ACGT 4 cut(s) 2252, 3103, 4023, 6429
Hsp92I GRCGYC 1 cut(s) 956
HspAI GCGC 2 cut(s) 338, 7187
KpnI GGTACC 1 cut(s) 8207
KroI GCCGGC 1 cut(s) 293
KroNI GCCGGC 1 cut(s) 295
Ksp22I TGATCA 3 cut(s) 553, 1942, 7780
LguI GCTCTTC 2 cut(s) 1404, 8697
MaeII ACGT 4 cut(s) 2252, 3103, 4023, 6429
MbiI CCGCTC 1 cut(s) 3644
MfeI CAATTG 2 cut(s) 5925, 8289
MflI RGATCY 4 cut(s) 1921, 3404, 5294, 6941
Mph1103I ATGCAT 4 cut(s) 1159, 6617, 6856, 8453
MroNI GCCGGC 1 cut(s) 293
MslI CAYNNNNRTG 2 cut(s) 672, 1263
MspA1I CMGCKG 5 cut(s) 2033, 3689, 3887, 5780, 7334
MspCI CTTAAG 2 cut(s) 3991, 4192
MspI CCGG 2 cut(s) 294, 5714
MspR9I CCNGG 1 cut(s) 4010
MunI CAATTG 2 cut(s) 5925, 8289
Mva1269I GAATGC 4 cut(s) 997, 4627, 6617, 8453
MvaI CCWGG 1 cut(s) 4010
MvnI CGCG 2 cut(s) 41, 488
NaeI GCCGGC 1 cut(s) 295
NgoMIV GCCGGC 1 cut(s) 293
NmeAIII GCCGAG 2 cut(s) 3835, 6514
NruI TCGCGA 2 cut(s) 41, 488
NsbI TGCGCA 1 cut(s) 7188
NsiI ATGCAT 4 cut(s) 1159, 6617, 6856, 8453
NspV TTCGAA 2 cut(s) 429, 7013
PaeI GCATGC 1 cut(s) 3236
PaeR7I CTCGAG 1 cut(s) 5829
PagI TCATGA 3 cut(s) 3565, 4369, 7852
PaqCI CACCTGC 3 cut(s) 4250, 6148, 7990
PciI ACATGT 7 cut(s) 559, 4772, 5021, 5270, 5548, 6917, 8591
PciSI GCTCTTC 2 cut(s) 1404, 8697
PcsI WCGNNNNNNNCGW 1 cut(s) 1764
PctI GAATGC 4 cut(s) 997, 4627, 6617, 8453
PdiI GCCGGC 1 cut(s) 295
PflFI GACNNNGTC 1 cut(s) 3020
PscI ACATGT 7 cut(s) 559, 4772, 5021, 5270, 5548, 6917, 8591
PshBI ATTAAT 1 cut(s) 3351
PsiI TTATAA 1 cut(s) 8719
Psp124BI GAGCTC 3 cut(s) 2213, 4565, 7487
Psp6I CCWGG 1 cut(s) 4008
PspEI GGTNACC 3 cut(s) 2491, 3343, 4336
PspFI CCCAGC 1 cut(s) 5362
PspGI CCWGG 1 cut(s) 4008
PspOMI GGGCCC 1 cut(s) 4005
PspPI GGNCC 9 cut(s) 268, 2152, 2678, 4005, 4006, 4012, 5748, 6229, 6377
PsrI GAACNNNNNNTAC 2 cut(s) 1143, 1175
PstI CTGCAG 6 cut(s) 469, 1150, 2038, 5097, 5612, 5743
PstNI CAGNNNCTG 3 cut(s) 389, 2099, 3119
PsuI RGATCY 4 cut(s) 1921, 3404, 5294, 6941
PsyI GACNNNGTC 1 cut(s) 3020
PvuII CAGCTG 5 cut(s) 2033, 3689, 3887, 5780, 7334
RruI TCGCGA 2 cut(s) 41, 488
RseI CAYNNNNRTG 2 cut(s) 672, 1263
SacI GAGCTC 3 cut(s) 2213, 4565, 7487
SalI GTCGAC 1 cut(s) 95
SapI GCTCTTC 2 cut(s) 1404, 8697
Sau96I GGNCC 9 cut(s) 268, 2152, 2678, 4005, 4006, 4012, 5748, 6229, 6377
ScrFI CCNGG 1 cut(s) 4010
SfcI CTRYAG 8 cut(s) 465, 1146, 1890, 2034, 3888, 5093, 5608, 5739
Sfr274I CTCGAG 1 cut(s) 5829
SfuI TTCGAA 2 cut(s) 429, 7013
SinI GGWCC 5 cut(s) 268, 2678, 4012, 6229, 6377
SlaI CTCGAG 1 cut(s) 5829
SmiMI CAYNNNNRTG 2 cut(s) 672, 1263
SphI GCATGC 1 cut(s) 3236
SsiI CCGC 2 cut(s) 772, 3644
SspI AATATT 2 cut(s) 7027, 7176
SstI GAGCTC 3 cut(s) 2213, 4565, 7487
StyD4I CCNGG 1 cut(s) 4008
StyI CCWWGG 5 cut(s) 1590, 2511, 3207, 3408, 7269
TaiI ACGT 4 cut(s) 2255, 3106, 4026, 6432
TauI GCSGC 1 cut(s) 774
TspGWI ACGGA 8 cut(s) 23, 1222, 2801, 3551, 5474, 5552, 6146, 6518
Tth111I GACNNNGTC 1 cut(s) 3020
Vha464I CTTAAG 2 cut(s) 3991, 4192
VneI GTGCAC 1 cut(s) 1358
VpaK11BI GGWCC 5 cut(s) 268, 2678, 4012, 6229, 6377
VspI ATTAAT 1 cut(s) 3351
XagI CCTNNNNNAGG 1 cut(s) 779
XbaI TCTAGA 1 cut(s) 2125
XcmI CCANNNNNNNNNTGG 1 cut(s) 136
XhoI CTCGAG 1 cut(s) 5829
XmiI GTMKAC 6 cut(s) 57, 96, 2983, 3981, 7668, 8055
Zsp2I ATGCAT 4 cut(s) 1159, 6617, 6856, 8453
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.