RchiOBHm_Chr1g0362621

DUF1785

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0001300
Physical Location & Seq
Reverse (-)
54247777 .. 54259942
12166 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2163 bp
ATGTTTTCTCATAGGGCCTCCAAAAAGTTTGAGACGGCCCTGTTCTGGAGAGGCTACTACCAAAGCCTAAGGCCAACTCAGTTTGGTCTATCCCTCAATATTGTTGTCTCGGCAAAGGCTTTTTACCAGTCGACTCTGGTGACAGAGTTTATTCAGCAACATTTTAACTATAGAGATATCTCCAAGGGTTTGTCCAATCGTGATTGTCTTGAGATGAATCAAACTCAAGGGATCTTCATGAAAAAATATCCCAAGAAATTTAATAAATTTGAATGTTGGGAGAAAGTTAAGTACCACCCGTATTTTGTTGATCCACAATCTAATCCTCAACCATCGGCATCATATTCGACAGCTACTGCCTCTGAAAATGAGTCTCCAATTGAGTTGGATGATGATATCATTTCGGAGACACCATCAAGCTCCATGCCAAGACCAATGGGACAAAAGAGAGCCAAAGAAGCAAAGAAGAAAGGAAAGAAGGCGCAAGATGCAGCAGAAAGTATGACTCTTACTATTCAAGCCATGGCCGAATCAACCCAAGCTTCTGTTGAGCTAGTGAAGAAAAGAAACGAAGAAGTGGCCTCTCACACAAAGAAGGTATTTGAATTTGAAGAGGCGAAAGAAGATGCAAGAATTATGGCTATGGATATCGATACTAATTCCATGACACCACAATCAAAGGCTTGGTGGAAAAAGAAGAAGGGTGATATTGTAGCAAAAACAATCAATTGCCCTTGGTTGATGGGTGCATTTGCTCTAAGCGAGTTGACGTTTATTCTTGAGGAGGACAAACAAACTAAAGTATCTGTGATTCGATATTATCATGATAAGTATTGTATTAGCCTAAAACATGTGGCTTTGACTGCCCTTCAATGTGGAAATGATTCAAGGCCTATTTATTTGCCCATGGAGCTGTCTGTTATTATTTGTGGGCAAAGATACACAGGGAAACTTGATAAAAAGCAAGTAACAAAGCTGCTGAGAGCAACTTGCTCAAGGCCCACGGCTAGGGGAAAAGAGATAAAGATGGTGGCCAATGATATTCATTACCACCAAAACTTAATGAACAGTCAATTTGGAATAAAAGTGAGCAAAGACATGGAACTTGTGGATGCTAGGGCATTACCACCTCCAATGGTAATTACTGCTCGTTTATGTTTCAGCAATTCAAACAACATTGATCTTTCTATTTTAACGAGTGATTATGCTAATTGTCACAGCTTAAATACCATGACAGTGGTCTTGAAACAAAGGATATATACTCCCCGGATGGGTGCGTGGAACATGGACAATAAGAAAATGGTTAATGGTGGCATAGTGGATTTTTGGGCGTTTGTAAATTTCTCTGGAATACCCGAAGAATCTAGCGATCGCTTTATTAAGGCACTCATCGCCATGTGCAATAGTAAAGGGATGATTAATGTCAAGGTTGGTGGCAGAAACACCGTCTTAAATGATGCCATTCAAAGGAGCATTCCTCTTGTCAATGATGATCCTACAATCATCATCGGTGCTGATGTCGCACATCCACAACCTGGGGAAGACAGTAGCCCATCCATAGCAGCAGTGGTTGCCTCAATGGACTGGCCGGAGGTCTATAAGTATAGAGGAGTCCTGGATGGTGTCAGTGAAGGGCAGTTTAGCCAAGTTCTGCTCTATGAGATGGATGTCATACGAAAGGCCTGTGCTTCTTTGGAGGAGGGGTATATGCCTCCAGTTACTTTTGCTGTGGTACAGAAAAGGCATCACACTCGCCTTTTTCTTGCTGGCAACAAGAGCCATAGGAAATGCAATGTTCTACCAGGTACCACGGTGGATACCAAGATATGCCATCCAACAGAATTTGATTTCTACCTTACTAGCCATGCTGCAATTCAGGGAACCAGTTGCCCTACTCACTATCATGTCCTGTTTGATGAGAACAAGTTCAGTGTTGATGCCTTGCAGATTCTCACCAACAATCTGTGCTACACATATGCAAGGTGCACCCGTGCAGTTTCCGTAGTGCCTCCTGTCTATTACGCTCATCTGGCTGCATCTAGAGGACGCTATTACATTAAGGGTGATGCCTCGAATGATGCTTCTTCAGGTGGCACTGCCGCACAGTTCCAGATACTTCCTGATGTGCATCATCATGTCAAGGATGTGATGTTTTTCTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArgoL1 ArgoL2 ArgoN PAZ Piwi

Protein Analysis

720

Amino Acids

81.07

Weight (kDa)

8.82

Isoelectric Point (pI)

39.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArgoL1 PF08699 15 - 43 4.4e-10 Argonaute linker 1 domain
NAM-associated PF14303 85 - 237 8.2e-10 No apical meristem-associated C-terminal domain
PAZ PF02170 255 - 326 4e-12 PAZ domain
ArgoL2 PF16488 339 - 380 1.1e-07 Argonaute linker 2 domain
ArgoMid PF16487 421 - 472 1.3e-07 Mid domain of argonaute
Piwi PF02171 473 - 537 2.4e-10 Piwi domain
Piwi PF02171 540 - 687 5e-58 Piwi domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1805
AccB1I GGYRCC 1 cut(s) 1805
AccB7I CCANNNNNTGG 1 cut(s) 1535
AccI GTMKAC 1 cut(s) 131
AciI CCGC 1 cut(s) 2100
AclWI GGATC 3 cut(s) 239, 305, 1487
AcoI YGGCCR 3 cut(s) 525, 1032, 1586
AcsI RAATTY 5 cut(s) 257, 266, 605, 1339, 1841
AcuI CTGAAG 1 cut(s) 2070
AfaI GTAC 3 cut(s) 293, 1734, 1807
AfiI CCNNNNNNNGG 5 cut(s) 45, 1008, 1271, 1467, 1535
AflIII ACRYGT 1 cut(s) 850
AgsI TTSAA 9 cut(s) 272, 518, 605, 611, 872, 888, 1170, 1246, 1466
AjnI CCWGG 3 cut(s) 1534, 1614, 1801
AluBI AGCT 7 cut(s) 353, 420, 542, 553, 913, 976, 1221
AluI AGCT 7 cut(s) 353, 420, 542, 553, 913, 976, 1221
Alw21I GWGCWC 1 cut(s) 1988
Alw26I GTCTC 4 cut(s) 26, 112, 378, 401
Alw44I GTGCAC 1 cut(s) 1984
AlwI GGATC 3 cut(s) 239, 305, 1487
AlwNI CAGNNNCTG 1 cut(s) 356
ApaLI GTGCAC 1 cut(s) 1984
ApeKI GCWGC 5 cut(s) 491, 976, 1562, 1868, 2033
ApoI RAATTY 5 cut(s) 257, 266, 605, 1339, 1841
AseI ATTAAT 1 cut(s) 1419
AsiSI GCGATCGC 1 cut(s) 1372
Asp700I GAANNNNTTC 2 cut(s) 883, 1925
Asp718I GGTACC 1 cut(s) 1805
AspLEI GCGC 1 cut(s) 484
AspS9I GGNCC 3 cut(s) 15, 37, 999
AsuC2I CCSGG 1 cut(s) 1267
AsuHPI GGTGA 4 cut(s) 151, 716, 1945, 2075
AxyI CCTNAGG 1 cut(s) 68
BaeGI GKGCMC 1 cut(s) 1988
BaeI ACNNNNGTAYC 4 cut(s) 786, 819, 1797, 1830
BalI TGGCCA 1 cut(s) 1034
BanI GGYRCC 1 cut(s) 1805
BbsI GAAGAC 1 cut(s) 1548
Bbv12I GWGCWC 1 cut(s) 1988
BbvI GCAGC 5 cut(s) 503, 963, 1574, 1855, 2020
BccI CCATC 9 cut(s) 340, 421, 736, 1021, 1264, 1561, 1613, 1657, 1839
BceAI ACGGC 2 cut(s) 51, 1020
BcgI CGANNNNNNTGC 4 cut(s) 327, 361, 1733, 1767
BciT130I CCWGG 3 cut(s) 1536, 1616, 1803
BciVI GTATCC 1 cut(s) 1810
BcnI CCSGG 1 cut(s) 1267
BcoDI GTCTC 4 cut(s) 26, 112, 378, 401
BfaI CTAG 6 cut(s) 554, 1008, 1116, 1365, 1860, 2040
BfmI CTRYAG 1 cut(s) 169
BfuI GTATCC 1 cut(s) 1810
BisI GCNGC 6 cut(s) 492, 977, 1563, 1869, 2034, 2100
BlsI GCNGC 6 cut(s) 493, 978, 1564, 1870, 2035, 2101
Bme1390I CCNGG 4 cut(s) 1267, 1536, 1616, 1803
BmgT120I GGNCC 3 cut(s) 15, 37, 999
BmiI GGNNCC 2 cut(s) 1807, 1882
BmrFI CCNGG 4 cut(s) 1267, 1536, 1616, 1803
BoxI GACNNNNGTC 1 cut(s) 1238
BpiI GAAGAC 1 cut(s) 1548
BplI GAGNNNNNCTC 2 cut(s) 1462, 1494
BpmI CTGGAG 2 cut(s) 67, 1698
BpuEI CTTGAG 4 cut(s) 210, 230, 800, 979
BpuMI CCSGG 1 cut(s) 1267
Bsa29I ATCGAT 1 cut(s) 651
BsaBI GATNNNNATC 1 cut(s) 2127
BsaJI CCNNGG 8 cut(s) 183, 522, 734, 906, 1002, 1265, 1535, 1809
BsaXI ACNNNNNCTCC 2 cut(s) 1688, 1718
Bsc4I CCNNNNNNNGG 5 cut(s) 45, 1008, 1271, 1467, 1535
Bse1I ACTGG 4 cut(s) 127, 1589, 1715, 1884
Bse21I CCTNAGG 1 cut(s) 68
Bse3DI GCAATG 1 cut(s) 1798
Bse8I GATNNNNATC 1 cut(s) 2127
BseBI CCWGG 3 cut(s) 1536, 1616, 1803
BseCI ATCGAT 1 cut(s) 651
BseDI CCNNGG 8 cut(s) 183, 522, 734, 906, 1002, 1265, 1535, 1809
BseJI GATNNNNATC 1 cut(s) 2127
BseLI CCNNNNNNNGG 5 cut(s) 45, 1008, 1271, 1467, 1535
BseMI GCAATG 1 cut(s) 1798
BseMII CTCAG 2 cut(s) 92, 971
BseNI ACTGG 4 cut(s) 127, 1589, 1715, 1884
BseRI GAGGAG 3 cut(s) 797, 1623, 1712
BseSI GKGCMC 1 cut(s) 1988
BseXI GCAGC 5 cut(s) 503, 963, 1574, 1855, 2020
BsgI GTGCAG 1 cut(s) 2013
Bsh1285I CGRYCG 1 cut(s) 1372
BshNI GGYRCC 1 cut(s) 1805
BshVI ATCGAT 1 cut(s) 651
BsiEI CGRYCG 1 cut(s) 1372
BsiHKAI GWGCWC 1 cut(s) 1988
BsiSI CCGG 2 cut(s) 1267, 1589
BslFI GGGAC 1 cut(s) 453
BslI CCNNNNNNNGG 5 cut(s) 45, 1008, 1271, 1467, 1535
BsmAI GTCTC 4 cut(s) 26, 112, 378, 401
BsmBI CGTCTC 1 cut(s) 26
BsmFI GGGAC 1 cut(s) 453
BsmI GAATGC 1 cut(s) 1473
Bsp1286I GDGCHC 1 cut(s) 1988
Bsp143I GATC 5 cut(s) 231, 310, 1180, 1369, 1492
Bsp19I CCATGG 2 cut(s) 522, 906
BspACI CCGC 1 cut(s) 2100
BspCNI CTCAG 2 cut(s) 91, 972
BspDI ATCGAT 1 cut(s) 651
BspHI TCATGA 2 cut(s) 237, 823
BspLI GGNNCC 2 cut(s) 1807, 1882
BspPI GGATC 3 cut(s) 239, 305, 1487
BspT107I GGYRCC 1 cut(s) 1805
BsrDI GCAATG 1 cut(s) 1798
BsrI ACTGG 4 cut(s) 127, 1589, 1715, 1884
BssECI CCNNGG 8 cut(s) 183, 522, 734, 906, 1002, 1265, 1535, 1809
BssMI GATC 5 cut(s) 231, 310, 1180, 1369, 1492
BssT1I CCWWGG 4 cut(s) 183, 522, 734, 906
Bst2UI CCWGG 3 cut(s) 1536, 1616, 1803
Bst4CI ACNGT 6 cut(s) 1070, 1237, 1447, 1547, 1813, 2106
Bst6I CTCTTC 1 cut(s) 606
BstAPI GCANNNNNTGC 1 cut(s) 1571
BstC8I GCNNGC 1 cut(s) 1768
BstDEI CTNAG 4 cut(s) 68, 78, 758, 980
BstDSI CCRYGG 4 cut(s) 522, 906, 1002, 1809
BstHHI GCGC 1 cut(s) 484
BstKTI GATC 5 cut(s) 234, 313, 1183, 1372, 1495
BstMAI GTCTC 4 cut(s) 26, 112, 378, 401
BstMBI GATC 5 cut(s) 231, 310, 1180, 1369, 1492
BstMCI CGRYCG 1 cut(s) 1372
BstMWI GCNNNNNNNGC 9 cut(s) 458, 488, 863, 910, 1391, 1520, 1571, 1776, 2030
BstNI CCWGG 3 cut(s) 1536, 1616, 1803
BstNSI RCATGY 1 cut(s) 854
BstPAI GACNNNNGTC 1 cut(s) 1238
BstSCI CCNGG 4 cut(s) 1265, 1534, 1614, 1801
BstSFI CTRYAG 1 cut(s) 169
BstSLI GKGCMC 1 cut(s) 1988
BstV1I GCAGC 5 cut(s) 503, 963, 1574, 1855, 2020
BstV2I GAAGAC 1 cut(s) 1548
BstX2I RGATCY 1 cut(s) 231
BstXI CCANNNNNNTGG 1 cut(s) 1237
BstYI RGATCY 1 cut(s) 231
Bsu15I ATCGAT 1 cut(s) 651
Bsu36I CCTNAGG 1 cut(s) 68
BsuI GTATCC 1 cut(s) 1810
BsuTUI ATCGAT 1 cut(s) 651
BtgI CCRYGG 4 cut(s) 522, 906, 1002, 1809
BtgZI GCGATG 1 cut(s) 1375
BtsI GCAGTG 2 cut(s) 1572, 2094
BtsIMutI CAGTG 5 cut(s) 1242, 1572, 1633, 1936, 2094
Cac8I GCNNGC 1 cut(s) 1768
CaiI CAGNNNCTG 1 cut(s) 356
CciI TCATGA 2 cut(s) 237, 823
CfoI GCGC 1 cut(s) 484
Cfr13I GGNCC 3 cut(s) 15, 37, 999
ClaI ATCGAT 1 cut(s) 651
CseI GACGC 1 cut(s) 2055
CsiI ACCWGGT 1 cut(s) 1801
Csp6I GTAC 3 cut(s) 292, 1733, 1806
CspCI CAANNNNNGTGG 2 cut(s) 1414, 1449
CviQI GTAC 3 cut(s) 292, 1733, 1806
DdeI CTNAG 4 cut(s) 68, 78, 758, 980
DpnI GATC 5 cut(s) 233, 312, 1182, 1371, 1494
DpnII GATC 5 cut(s) 231, 310, 1180, 1369, 1492
EaeI YGGCCR 3 cut(s) 525, 1032, 1586
Eam1104I CTCTTC 1 cut(s) 606
EarI CTCTTC 1 cut(s) 606
Eco130I CCWWGG 4 cut(s) 183, 522, 734, 906
Eco147I AGGCCT 2 cut(s) 892, 1682
Eco32I GATATC 3 cut(s) 178, 397, 649
Eco57I CTGAAG 1 cut(s) 2070
Eco81I CCTNAGG 1 cut(s) 68
EcoO109I RGGNCCY 1 cut(s) 15
EcoRII CCWGG 3 cut(s) 1534, 1614, 1801
EcoRV GATATC 3 cut(s) 178, 397, 649
EcoT14I CCWWGG 4 cut(s) 183, 522, 734, 906
ErhI CCWWGG 4 cut(s) 183, 522, 734, 906
Esp3I CGTCTC 1 cut(s) 26
FaqI GGGAC 1 cut(s) 453
FauNDI CATATG 1 cut(s) 1975
FblI GTMKAC 1 cut(s) 131
Fnu4HI GCNGC 6 cut(s) 492, 977, 1563, 1869, 2034, 2100
Fsp4HI GCNGC 6 cut(s) 492, 977, 1563, 1869, 2034, 2100
FspBI CTAG 6 cut(s) 554, 1008, 1116, 1365, 1860, 2040
GlaI GCGC 1 cut(s) 483
GluI GCNGC 6 cut(s) 492, 977, 1563, 1869, 2034, 2100
GsuI CTGGAG 2 cut(s) 67, 1698
HapII CCGG 2 cut(s) 1267, 1589
HgaI GACGC 1 cut(s) 2055
HhaI GCGC 1 cut(s) 484
Hin6I GCGC 1 cut(s) 482
HinP1I GCGC 1 cut(s) 482
HincII GTYRAC 2 cut(s) 132, 768
HindII GTYRAC 2 cut(s) 132, 768
HindIII AAGCTT 1 cut(s) 540
HpaII CCGG 2 cut(s) 1267, 1589
HphI GGTGA 4 cut(s) 151, 716, 1945, 2075
Hpy166II GTNNAC 3 cut(s) 132, 768, 1986
Hpy188I TCNGA 2 cut(s) 364, 406
Hpy8I GTNNAC 3 cut(s) 132, 768, 1986
HpyAV CCTTC 5 cut(s) 472, 589, 694, 878, 1625
HpyCH4III ACNGT 6 cut(s) 1070, 1237, 1447, 1547, 1813, 2106
HpyCH4IV ACGT 1 cut(s) 770
HpyF10VI GCNNNNNNNGC 9 cut(s) 458, 488, 863, 910, 1391, 1520, 1571, 1776, 2030
HpyF3I CTNAG 4 cut(s) 68, 78, 758, 980
HpySE526I ACGT 1 cut(s) 770
HspAI GCGC 1 cut(s) 482
KpnI GGTACC 1 cut(s) 1809
Kzo9I GATC 5 cut(s) 231, 310, 1180, 1369, 1492
LmnI GCTCC 3 cut(s) 425, 910, 1470
Lsp1109I GCAGC 5 cut(s) 503, 963, 1574, 1855, 2020
MabI ACCWGGT 1 cut(s) 1801
MaeI CTAG 6 cut(s) 554, 1008, 1116, 1365, 1860, 2040
MaeII ACGT 1 cut(s) 770
MaeIII GTNAC 4 cut(s) 139, 967, 1214, 1717
MalI GATC 5 cut(s) 233, 312, 1182, 1371, 1494
MboI GATC 5 cut(s) 231, 310, 1180, 1369, 1492
MfeI CAATTG 2 cut(s) 378, 727
MflI RGATCY 1 cut(s) 231
MhlI GDGCHC 1 cut(s) 1988
MlsI TGGCCA 1 cut(s) 1034
MluNI TGGCCA 1 cut(s) 1034
MlyI GAGTC 4 cut(s) 127, 380, 499, 1620
MmeI TCCRAC 2 cut(s) 366, 1859
Mox20I TGGCCA 1 cut(s) 1034
MroXI GAANNNNTTC 2 cut(s) 883, 1925
MscI TGGCCA 1 cut(s) 1034
MslI CAYNNNNRTG 4 cut(s) 1235, 1394, 1902, 2133
Msp20I TGGCCA 1 cut(s) 1034
MspI CCGG 2 cut(s) 1267, 1589
MspR9I CCNGG 4 cut(s) 1267, 1536, 1616, 1803
MunI CAATTG 2 cut(s) 378, 727
Mva1269I GAATGC 1 cut(s) 1473
MvaI CCWGG 3 cut(s) 1536, 1616, 1803
MwoI GCNNNNNNNGC 9 cut(s) 458, 488, 863, 910, 1391, 1520, 1571, 1776, 2030
NciI CCSGG 1 cut(s) 1267
NcoI CCATGG 2 cut(s) 522, 906
NdeI CATATG 1 cut(s) 1975
NdeII GATC 5 cut(s) 231, 310, 1180, 1369, 1492
NlaIV GGNNCC 2 cut(s) 1807, 1882
NmeAIII GCCGAG 1 cut(s) 89
NmuCI GTSAC 2 cut(s) 139, 1214
NspI RCATGY 1 cut(s) 854
PagI TCATGA 2 cut(s) 237, 823
PceI AGGCCT 2 cut(s) 892, 1682
PciI ACATGT 1 cut(s) 850
PctI GAATGC 1 cut(s) 1473
PdmI GAANNNNTTC 2 cut(s) 883, 1925
PfeI GAWTC 6 cut(s) 217, 530, 811, 884, 1361, 1948
PflMI CCANNNNNTGG 1 cut(s) 1535
PfoI TCCNGGA 1 cut(s) 1614
PkrI GCNGC 6 cut(s) 493, 978, 1564, 1870, 2035, 2101
Ple19I CGATCG 1 cut(s) 1372
PleI GAGTC 4 cut(s) 127, 379, 499, 1619
PpsI GAGTC 4 cut(s) 127, 379, 499, 1619
PscI ACATGT 1 cut(s) 850
PshAI GACNNNNGTC 1 cut(s) 1238
PshBI ATTAAT 1 cut(s) 1419
Psp6I CCWGG 3 cut(s) 1534, 1614, 1801
PspGI CCWGG 3 cut(s) 1534, 1614, 1801
PspN4I GGNNCC 2 cut(s) 1807, 1882
PspPI GGNCC 3 cut(s) 15, 37, 999
PstNI CAGNNNCTG 1 cut(s) 356
PsuI RGATCY 1 cut(s) 231
PvuI CGATCG 1 cut(s) 1372
RgaI GCGATCGC 1 cut(s) 1372
RsaI GTAC 3 cut(s) 293, 1734, 1807
RsaNI GTAC 3 cut(s) 292, 1733, 1806
RseI CAYNNNNRTG 4 cut(s) 1235, 1394, 1902, 2133
SalI GTCGAC 1 cut(s) 130
SatI GCNGC 6 cut(s) 492, 977, 1563, 1869, 2034, 2100
Sau3AI GATC 5 cut(s) 231, 310, 1180, 1369, 1492
Sau96I GGNCC 3 cut(s) 15, 37, 999
SchI GAGTC 4 cut(s) 127, 380, 499, 1620
ScrFI CCNGG 4 cut(s) 1267, 1536, 1616, 1803
SduI GDGCHC 1 cut(s) 1988
SexAI ACCWGGT 1 cut(s) 1801
SfaAI GCGATCGC 1 cut(s) 1372
SfcI CTRYAG 1 cut(s) 169
SgfI GCGATCGC 1 cut(s) 1372
SmiMI CAYNNNNRTG 4 cut(s) 1235, 1394, 1902, 2133
SmlI CTYRAG 4 cut(s) 209, 225, 779, 994
SmoI CTYRAG 4 cut(s) 209, 225, 779, 994
SseBI AGGCCT 2 cut(s) 892, 1682
SsiI CCGC 1 cut(s) 2100
SspI AATATT 1 cut(s) 100
SspMI CTAG 6 cut(s) 554, 1008, 1116, 1365, 1860, 2040
StuI AGGCCT 2 cut(s) 892, 1682
StyD4I CCNGG 4 cut(s) 1265, 1534, 1614, 1801
StyI CCWWGG 4 cut(s) 183, 522, 734, 906
TaaI ACNGT 6 cut(s) 1070, 1237, 1447, 1547, 1813, 2106
TaiI ACGT 1 cut(s) 773
TaqI TCGA 5 cut(s) 131, 347, 651, 814, 2072
TauI GCSGC 1 cut(s) 2102
TfiI GAWTC 6 cut(s) 217, 530, 811, 884, 1361, 1948
TscAI CASTG 5 cut(s) 1242, 1572, 1633, 1936, 2101
TseFI GTSAC 2 cut(s) 139, 1214
TseI GCWGC 5 cut(s) 491, 976, 1562, 1868, 2033
Tsp45I GTSAC 2 cut(s) 139, 1214
TspDTI ATGAA 5 cut(s) 226, 230, 254, 1034, 1079
TspGWI ACGGA 1 cut(s) 1990
TspRI CASTG 5 cut(s) 1242, 1572, 1633, 1936, 2101
Van91I CCANNNNNTGG 1 cut(s) 1535
VneI GTGCAC 1 cut(s) 1984
VspI ATTAAT 1 cut(s) 1419
XapI RAATTY 5 cut(s) 257, 266, 605, 1339, 1841
XbaI TCTAGA 1 cut(s) 2039
XceI RCATGY 1 cut(s) 854
XcmI CCANNNNNNNNNTGG 1 cut(s) 1564
XmiI GTMKAC 1 cut(s) 131
XmnI GAANNNNTTC 2 cut(s) 883, 1925
XspI CTAG 6 cut(s) 554, 1008, 1116, 1365, 1860, 2040
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.