Proteasome
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PI31_Prot_N | PF11566 | 8 - 103 | 4.9e-11 | PI31 proteasome regulator N-terminal |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 5, 34, 81 |
| AclI | AACGTT | 1 cut(s) | 260 |
| AcoI | YGGCCR | 1 cut(s) | 494 |
| AcsI | RAATTY | 2 cut(s) | 271, 455 |
| AfaI | GTAC | 1 cut(s) | 161 |
| AgsI | TTSAA | 2 cut(s) | 178, 276 |
| AjiI | CACGTC | 1 cut(s) | 500 |
| AluBI | AGCT | 1 cut(s) | 148 |
| AluI | AGCT | 1 cut(s) | 148 |
| AoxI | GGCC | 1 cut(s) | 494 |
| ApoI | RAATTY | 2 cut(s) | 271, 455 |
| AspS9I | GGNCC | 1 cut(s) | 473 |
| AsuHPI | GGTGA | 4 cut(s) | 70, 94, 208, 406 |
| AvaII | GGWCC | 1 cut(s) | 473 |
| BalI | TGGCCA | 1 cut(s) | 496 |
| BbsI | GAAGAC | 1 cut(s) | 404 |
| BbvCI | CCTCAGC | 1 cut(s) | 243 |
| BccI | CCATC | 1 cut(s) | 209 |
| BceAI | ACGGC | 1 cut(s) | 47 |
| Bme18I | GGWCC | 1 cut(s) | 473 |
| BmgBI | CACGTC | 1 cut(s) | 500 |
| BmgT120I | GGNCC | 1 cut(s) | 473 |
| BmiI | GGNNCC | 1 cut(s) | 475 |
| BmsI | GCATC | 1 cut(s) | 223 |
| BpiI | GAAGAC | 1 cut(s) | 404 |
| Bpu10I | CCTNAGC | 1 cut(s) | 243 |
| BsaBI | GATNNNNATC | 1 cut(s) | 348 |
| Bse8I | GATNNNNATC | 1 cut(s) | 348 |
| BseJI | GATNNNNATC | 1 cut(s) | 348 |
| BseMII | CTCAG | 3 cut(s) | 108, 234, 268 |
| BshFI | GGCC | 1 cut(s) | 496 |
| BslFI | GGGAC | 1 cut(s) | 459 |
| BsmFI | GGGAC | 1 cut(s) | 459 |
| BsmI | GAATGC | 1 cut(s) | 164 |
| BsnI | GGCC | 1 cut(s) | 496 |
| BspACI | CCGC | 3 cut(s) | 5, 34, 81 |
| BspANI | GGCC | 1 cut(s) | 496 |
| BspCNI | CTCAG | 3 cut(s) | 109, 235, 267 |
| BspHI | TCATGA | 1 cut(s) | 408 |
| BspLI | GGNNCC | 1 cut(s) | 475 |
| Bst4CI | ACNGT | 1 cut(s) | 330 |
| Bst6I | CTCTTC | 1 cut(s) | 112 |
| BstDEI | CTNAG | 3 cut(s) | 117, 243, 254 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 68, 493, 502 |
| BstV2I | GAAGAC | 1 cut(s) | 404 |
| BsuRI | GGCC | 1 cut(s) | 496 |
| BtrI | CACGTC | 1 cut(s) | 500 |
| CciI | TCATGA | 1 cut(s) | 408 |
| Cfr13I | GGNCC | 1 cut(s) | 473 |
| Csp6I | GTAC | 1 cut(s) | 160 |
| CviAII | CATG | 1 cut(s) | 409 |
| CviJI | RGCY | 6 cut(s) | 17, 148, 242, 250, 389, 496 |
| CviKI_1 | RGCY | 6 cut(s) | 17, 148, 242, 250, 389, 496 |
| CviQI | GTAC | 1 cut(s) | 160 |
| DdeI | CTNAG | 3 cut(s) | 117, 243, 254 |
| EaeI | YGGCCR | 1 cut(s) | 494 |
| Eam1104I | CTCTTC | 1 cut(s) | 112 |
| EarI | CTCTTC | 1 cut(s) | 112 |
| Eco47I | GGWCC | 1 cut(s) | 473 |
| EcoRI | GAATTC | 1 cut(s) | 271 |
| FaeI | CATG | 1 cut(s) | 412 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 41, 73 |
| FaqI | GGGAC | 1 cut(s) | 459 |
| FatI | CATG | 1 cut(s) | 408 |
| HaeIII | GGCC | 1 cut(s) | 496 |
| Hin1II | CATG | 1 cut(s) | 412 |
| HphI | GGTGA | 4 cut(s) | 70, 94, 208, 406 |
| Hpy166II | GTNNAC | 2 cut(s) | 67, 264 |
| Hpy188I | TCNGA | 2 cut(s) | 88, 257 |
| Hpy188III | TCNNGA | 1 cut(s) | 409 |
| Hpy8I | GTNNAC | 2 cut(s) | 67, 264 |
| HpyAV | CCTTC | 2 cut(s) | 85, 181 |
| HpyCH4III | ACNGT | 1 cut(s) | 330 |
| HpyCH4IV | ACGT | 2 cut(s) | 260, 499 |
| HpyCH4V | TGCA | 3 cut(s) | 172, 298, 487 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 68, 493, 502 |
| HpyF3I | CTNAG | 3 cut(s) | 117, 243, 254 |
| HpySE526I | ACGT | 2 cut(s) | 260, 499 |
| Hsp92II | CATG | 1 cut(s) | 412 |
| LpnPI | CCDG | 3 cut(s) | 134, 179, 224 |
| LweI | GCATC | 1 cut(s) | 223 |
| MaeII | ACGT | 2 cut(s) | 260, 499 |
| MaeIII | GTNAC | 1 cut(s) | 96 |
| MboII | GAAGA | 3 cut(s) | 99, 196, 409 |
| MlsI | TGGCCA | 1 cut(s) | 496 |
| MluCI | AATT | 4 cut(s) | 271, 316, 455, 520 |
| MluNI | TGGCCA | 1 cut(s) | 496 |
| MmeI | TCCRAC | 1 cut(s) | 111 |
| MnlI | CCTC | 6 cut(s) | 94, 112, 115, 121, 238, 301 |
| Mox20I | TGGCCA | 1 cut(s) | 496 |
| MscI | TGGCCA | 1 cut(s) | 496 |
| MseI | TTAA | 3 cut(s) | 224, 333, 510 |
| Msp20I | TGGCCA | 1 cut(s) | 496 |
| Mva1269I | GAATGC | 1 cut(s) | 164 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 68, 493, 502 |
| NlaIII | CATG | 1 cut(s) | 412 |
| NlaIV | GGNNCC | 1 cut(s) | 475 |
| PagI | TCATGA | 1 cut(s) | 408 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 60 |
| PctI | GAATGC | 1 cut(s) | 164 |
| Psp1406I | AACGTT | 1 cut(s) | 260 |
| PspN4I | GGNNCC | 1 cut(s) | 475 |
| PspPI | GGNCC | 1 cut(s) | 473 |
| RsaI | GTAC | 1 cut(s) | 161 |
| RsaNI | GTAC | 1 cut(s) | 160 |
| SaqAI | TTAA | 3 cut(s) | 224, 333, 510 |
| Sau96I | GGNCC | 1 cut(s) | 473 |
| SetI | ASST | 7 cut(s) | 54, 107, 150, 192, 263, 502, 510 |
| SfaNI | GCATC | 1 cut(s) | 223 |
| SinI | GGWCC | 1 cut(s) | 473 |
| Sse9I | AATT | 4 cut(s) | 271, 316, 455, 520 |
| SsiI | CCGC | 3 cut(s) | 5, 34, 81 |
| TaaI | ACNGT | 1 cut(s) | 330 |
| TaiI | ACGT | 2 cut(s) | 263, 502 |
| TaqI | TCGA | 1 cut(s) | 182 |
| TasI | AATT | 4 cut(s) | 271, 316, 455, 520 |
| Tru1I | TTAA | 3 cut(s) | 224, 333, 510 |
| Tru9I | TTAA | 3 cut(s) | 224, 333, 510 |
| TspDTI | ATGAA | 2 cut(s) | 284, 428 |
| VpaK11BI | GGWCC | 1 cut(s) | 473 |
| XapI | RAATTY | 2 cut(s) | 271, 455 |