Proteasome
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PI31_Prot_N | PF11566 | 15 - 154 | 3.3e-23 | PI31 proteasome regulator N-terminal |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 17 |
| AccB1I | GGYRCC | 1 cut(s) | 840 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 524, 581 |
| AccII | CGCG | 1 cut(s) | 218 |
| AccIII | TCCGGA | 1 cut(s) | 826 |
| AciI | CCGC | 8 cut(s) | 26, 39, 55, 102, 126, 133, 375, 803 |
| AclI | AACGTT | 1 cut(s) | 327 |
| AclWI | GGATC | 5 cut(s) | 731, 785, 818, 859, 872 |
| AcoI | YGGCCR | 1 cut(s) | 130 |
| AcsI | RAATTY | 1 cut(s) | 338 |
| AcyI | GRCGYC | 1 cut(s) | 841 |
| AfaI | GTAC | 1 cut(s) | 215 |
| AflIII | ACRYGT | 1 cut(s) | 216 |
| AgsI | TTSAA | 1 cut(s) | 232 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 330, 362 |
| AleI | CACNNNNGTG | 1 cut(s) | 413 |
| AluBI | AGCT | 1 cut(s) | 202 |
| AluI | AGCT | 1 cut(s) | 202 |
| Alw21I | GWGCWC | 2 cut(s) | 508, 784 |
| AlwI | GGATC | 5 cut(s) | 731, 785, 818, 859, 872 |
| Aor13HI | TCCGGA | 1 cut(s) | 826 |
| AoxI | GGCC | 5 cut(s) | 130, 497, 550, 800, 851 |
| ApoI | RAATTY | 1 cut(s) | 338 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 31 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 619 |
| AspA2I | CCTAGG | 1 cut(s) | 566 |
| AspLEI | GCGC | 1 cut(s) | 843 |
| AspS9I | GGNCC | 6 cut(s) | 497, 551, 602, 659, 800, 851 |
| AsuC2I | CCSGG | 4 cut(s) | 236, 705, 726, 888 |
| AsuHPI | GGTGA | 3 cut(s) | 274, 362, 539 |
| AsuII | TTCGAA | 1 cut(s) | 248 |
| AvaII | GGWCC | 2 cut(s) | 602, 659 |
| AvrII | CCTAGG | 1 cut(s) | 566 |
| BamHI | GGATCC | 1 cut(s) | 864 |
| BanI | GGYRCC | 1 cut(s) | 840 |
| BbsI | GAAGAC | 1 cut(s) | 450 |
| Bbv12I | GWGCWC | 2 cut(s) | 508, 784 |
| BccI | CCATC | 5 cut(s) | 55, 275, 305, 635, 758 |
| BceAI | ACGGC | 1 cut(s) | 68 |
| BciVI | GTATCC | 2 cut(s) | 525, 582 |
| BcnI | CCSGG | 4 cut(s) | 236, 705, 726, 888 |
| BfaI | CTAG | 4 cut(s) | 413, 567, 624, 910 |
| BfoI | RGCGCY | 1 cut(s) | 844 |
| BfuI | GTATCC | 2 cut(s) | 525, 582 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 808 |
| BisI | GCNGC | 5 cut(s) | 39, 102, 126, 133, 803 |
| BlnI | CCTAGG | 1 cut(s) | 566 |
| BlsI | GCNGC | 5 cut(s) | 40, 103, 127, 134, 804 |
| Bme18I | GGWCC | 2 cut(s) | 602, 659 |
| BmgT120I | GGNCC | 6 cut(s) | 497, 551, 602, 659, 800, 851 |
| BmiI | GGNNCC | 4 cut(s) | 661, 842, 852, 866 |
| BmsI | GCATC | 2 cut(s) | 289, 571 |
| BpiI | GAAGAC | 1 cut(s) | 450 |
| BpmI | CTGGAG | 3 cut(s) | 224, 735, 759 |
| Bpu14I | TTCGAA | 1 cut(s) | 248 |
| BpuEI | CTTGAG | 1 cut(s) | 417 |
| BpuMI | CCSGG | 4 cut(s) | 236, 705, 726, 888 |
| BsaBI | GATNNNNATC | 3 cut(s) | 537, 594, 822 |
| BsaHI | GRCGYC | 1 cut(s) | 841 |
| BsaJI | CCNNGG | 9 cut(s) | 494, 542, 553, 566, 695, 704, 740, 806, 887 |
| BsaWI | WCCGGW | 1 cut(s) | 826 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 197, 227 |
| Bse118I | RCCGGY | 1 cut(s) | 128 |
| Bse1I | ACTGG | 2 cut(s) | 177, 575 |
| Bse8I | GATNNNNATC | 3 cut(s) | 537, 594, 822 |
| BseAI | TCCGGA | 1 cut(s) | 826 |
| BseDI | CCNNGG | 9 cut(s) | 494, 542, 553, 566, 695, 704, 740, 806, 887 |
| BseGI | GGATG | 2 cut(s) | 30, 562 |
| BseJI | GATNNNNATC | 3 cut(s) | 537, 594, 822 |
| BseMII | CTCAG | 1 cut(s) | 335 |
| BseNI | ACTGG | 2 cut(s) | 177, 575 |
| BseRI | GAGGAG | 2 cut(s) | 150, 467 |
| BseX3I | CGGCCG | 1 cut(s) | 130 |
| Bsh1236I | CGCG | 1 cut(s) | 218 |
| Bsh1285I | CGRYCG | 1 cut(s) | 133 |
| BshFI | GGCC | 5 cut(s) | 132, 499, 552, 802, 853 |
| BshNI | GGYRCC | 1 cut(s) | 840 |
| BsiEI | CGRYCG | 1 cut(s) | 133 |
| BsiHKAI | GWGCWC | 2 cut(s) | 508, 784 |
| BsiSI | CCGG | 7 cut(s) | 108, 129, 235, 704, 725, 827, 887 |
| BslFI | GGGAC | 1 cut(s) | 695 |
| BsmFI | GGGAC | 1 cut(s) | 695 |
| BsmI | GAATGC | 2 cut(s) | 564, 621 |
| BsnI | GGCC | 5 cut(s) | 132, 499, 552, 802, 853 |
| Bsp119I | TTCGAA | 1 cut(s) | 248 |
| Bsp1286I | GDGCHC | 2 cut(s) | 508, 784 |
| Bsp13I | TCCGGA | 1 cut(s) | 826 |
| Bsp143I | GATC | 7 cut(s) | 532, 589, 667, 736, 790, 823, 864 |
| BspACI | CCGC | 8 cut(s) | 26, 39, 55, 102, 126, 133, 375, 803 |
| BspANI | GGCC | 5 cut(s) | 132, 499, 552, 802, 853 |
| BspCNI | CTCAG | 1 cut(s) | 334 |
| BspEI | TCCGGA | 1 cut(s) | 826 |
| BspFNI | CGCG | 1 cut(s) | 218 |
| BspLI | GGNNCC | 4 cut(s) | 661, 842, 852, 866 |
| BspPI | GGATC | 5 cut(s) | 731, 785, 818, 859, 872 |
| BspT104I | TTCGAA | 1 cut(s) | 248 |
| BspT107I | GGYRCC | 1 cut(s) | 840 |
| BsrFI | RCCGGY | 1 cut(s) | 128 |
| BsrI | ACTGG | 2 cut(s) | 177, 575 |
| BssAI | RCCGGY | 1 cut(s) | 128 |
| BssECI | CCNNGG | 9 cut(s) | 494, 542, 553, 566, 695, 704, 740, 806, 887 |
| BssMI | GATC | 7 cut(s) | 532, 589, 667, 736, 790, 823, 864 |
| BssNI | GRCGYC | 1 cut(s) | 841 |
| BssT1I | CCWWGG | 1 cut(s) | 566 |
| Bst4CI | ACNGT | 2 cut(s) | 335, 393 |
| Bst6I | CTCTTC | 1 cut(s) | 168 |
| BstACI | GRCGYC | 1 cut(s) | 841 |
| BstBI | TTCGAA | 1 cut(s) | 248 |
| BstC8I | GCNNGC | 4 cut(s) | 43, 130, 550, 784 |
| BstDEI | CTNAG | 1 cut(s) | 321 |
| BstF5I | GGATG | 2 cut(s) | 30, 562 |
| BstFNI | CGCG | 1 cut(s) | 218 |
| BstH2I | RGCGCY | 1 cut(s) | 844 |
| BstHHI | GCGC | 1 cut(s) | 843 |
| BstKTI | GATC | 7 cut(s) | 535, 592, 670, 739, 793, 826, 867 |
| BstMBI | GATC | 7 cut(s) | 532, 589, 667, 736, 790, 823, 864 |
| BstMCI | CGRYCG | 1 cut(s) | 133 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 89, 98, 314, 808 |
| BstNSI | RCATGY | 1 cut(s) | 652 |
| BstUI | CGCG | 1 cut(s) | 218 |
| BstV2I | GAAGAC | 1 cut(s) | 450 |
| BstX2I | RGATCY | 1 cut(s) | 864 |
| BstYI | RGATCY | 1 cut(s) | 864 |
| BstZI | CGGCCG | 1 cut(s) | 130 |
| BsuI | GTATCC | 2 cut(s) | 525, 582 |
| BsuRI | GGCC | 5 cut(s) | 132, 499, 552, 802, 853 |
| BtsCI | GGATG | 2 cut(s) | 30, 562 |
| BtsIMutI | CAGTG | 2 cut(s) | 331, 582 |
| Cac8I | GCNNGC | 4 cut(s) | 43, 130, 550, 784 |
| CfoI | GCGC | 1 cut(s) | 843 |
| Cfr10I | RCCGGY | 1 cut(s) | 128 |
| Cfr13I | GGNCC | 6 cut(s) | 497, 551, 602, 659, 800, 851 |
| CsiI | ACCWGGT | 1 cut(s) | 604 |
| Csp6I | GTAC | 1 cut(s) | 214 |
| CviAII | CATG | 2 cut(s) | 22, 649 |
| CviQI | GTAC | 1 cut(s) | 214 |
| DdeI | CTNAG | 1 cut(s) | 321 |
| DinI | GGCGCC | 1 cut(s) | 842 |
| DpnI | GATC | 7 cut(s) | 534, 591, 669, 738, 792, 825, 866 |
| DpnII | GATC | 7 cut(s) | 532, 589, 667, 736, 790, 823, 864 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 17 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 17 |
| EaeI | YGGCCR | 1 cut(s) | 130 |
| EagI | CGGCCG | 1 cut(s) | 130 |
| Eam1104I | CTCTTC | 1 cut(s) | 168 |
| EarI | CTCTTC | 1 cut(s) | 168 |
| EclXI | CGGCCG | 1 cut(s) | 130 |
| Eco130I | CCWWGG | 1 cut(s) | 566 |
| Eco32I | GATATC | 1 cut(s) | 488 |
| Eco47I | GGWCC | 2 cut(s) | 602, 659 |
| Eco52I | CGGCCG | 1 cut(s) | 130 |
| EcoRV | GATATC | 1 cut(s) | 488 |
| EcoT14I | CCWWGG | 1 cut(s) | 566 |
| EcoT22I | ATGCAT | 1 cut(s) | 564 |
| EgeI | GGCGCC | 1 cut(s) | 842 |
| EheI | GGCGCC | 1 cut(s) | 842 |
| ErhI | CCWWGG | 1 cut(s) | 566 |
| FaeI | CATG | 2 cut(s) | 25, 652 |
| FaiI | YATR | 6 cut(s) | 23, 357, 650, 796, 798, 906 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 62, 94 |
| FaqI | GGGAC | 1 cut(s) | 695 |
| FatI | CATG | 2 cut(s) | 21, 648 |
| FauNDI | CATATG | 1 cut(s) | 796 |
| Fnu4HI | GCNGC | 5 cut(s) | 39, 102, 126, 133, 803 |
| FokI | GGATG | 2 cut(s) | 17, 549 |
| Fsp4HI | GCNGC | 5 cut(s) | 39, 102, 126, 133, 803 |
| FspBI | CTAG | 4 cut(s) | 413, 567, 624, 910 |
| GlaI | GCGC | 1 cut(s) | 842 |
| GluI | GCNGC | 5 cut(s) | 39, 102, 126, 133, 803 |
| GsuI | CTGGAG | 3 cut(s) | 224, 735, 759 |
| HaeII | RGCGCY | 1 cut(s) | 844 |
| HaeIII | GGCC | 5 cut(s) | 132, 499, 552, 802, 853 |
| HapII | CCGG | 7 cut(s) | 108, 129, 235, 704, 725, 827, 887 |
| HhaI | GCGC | 1 cut(s) | 843 |
| Hin1I | GRCGYC | 1 cut(s) | 841 |
| Hin1II | CATG | 2 cut(s) | 25, 652 |
| Hin6I | GCGC | 1 cut(s) | 841 |
| HinP1I | GCGC | 1 cut(s) | 841 |
| HinfI | GANTC | 2 cut(s) | 421, 455 |
| HpaII | CCGG | 7 cut(s) | 108, 129, 235, 704, 725, 827, 887 |
| HphI | GGTGA | 3 cut(s) | 274, 362, 539 |
| Hpy166II | GTNNAC | 2 cut(s) | 88, 331 |
| Hpy188I | TCNGA | 4 cut(s) | 35, 148, 324, 901 |
| Hpy188III | TCNNGA | 3 cut(s) | 734, 815, 827 |
| Hpy8I | GTNNAC | 2 cut(s) | 88, 331 |
| HpyAV | CCTTC | 4 cut(s) | 106, 247, 504, 630 |
| HpyCH4III | ACNGT | 2 cut(s) | 335, 393 |
| HpyCH4IV | ACGT | 2 cut(s) | 327, 684 |
| HpyCH4V | TGCA | 4 cut(s) | 169, 361, 562, 836 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 89, 98, 314, 808 |
| HpyF3I | CTNAG | 1 cut(s) | 321 |
| HpySE526I | ACGT | 2 cut(s) | 327, 684 |
| Hsp92I | GRCGYC | 1 cut(s) | 841 |
| Hsp92II | CATG | 2 cut(s) | 25, 652 |
| HspAI | GCGC | 1 cut(s) | 841 |
| KasI | GGCGCC | 1 cut(s) | 840 |
| Kpn2I | TCCGGA | 1 cut(s) | 826 |
| KroI | GCCGGC | 1 cut(s) | 128 |
| KroNI | GCCGGC | 1 cut(s) | 130 |
| Kzo9I | GATC | 7 cut(s) | 532, 589, 667, 736, 790, 823, 864 |
| LmnI | GCTCC | 1 cut(s) | 880 |
| LweI | GCATC | 2 cut(s) | 289, 571 |
| MabI | ACCWGGT | 1 cut(s) | 604 |
| MaeI | CTAG | 4 cut(s) | 413, 567, 624, 910 |
| MaeII | ACGT | 2 cut(s) | 327, 684 |
| MalI | GATC | 7 cut(s) | 534, 591, 669, 738, 792, 825, 866 |
| MboI | GATC | 7 cut(s) | 532, 589, 667, 736, 790, 823, 864 |
| MboII | GAAGA | 4 cut(s) | 155, 262, 430, 450 |
| MflI | RGATCY | 1 cut(s) | 864 |
| MhlI | GDGCHC | 2 cut(s) | 508, 784 |
| MluCI | AATT | 3 cut(s) | 338, 379, 446 |
| MluI | ACGCGT | 1 cut(s) | 216 |
| Mly113I | GGCGCC | 1 cut(s) | 841 |
| MlyI | GAGTC | 1 cut(s) | 464 |
| MmeI | TCCRAC | 3 cut(s) | 463, 637, 667 |
| MnlI | CCTC | 8 cut(s) | 115, 166, 171, 364, 445, 710, 750, 783 |
| Mph1103I | ATGCAT | 1 cut(s) | 564 |
| MroI | TCCGGA | 1 cut(s) | 826 |
| MroNI | GCCGGC | 1 cut(s) | 128 |
| MroXI | GAANNNNTTC | 1 cut(s) | 619 |
| MseI | TTAA | 2 cut(s) | 119, 396 |
| MslI | CAYNNNNRTG | 1 cut(s) | 413 |
| MspI | CCGG | 7 cut(s) | 108, 129, 235, 704, 725, 827, 887 |
| Mva1269I | GAATGC | 2 cut(s) | 564, 621 |
| MvnI | CGCG | 1 cut(s) | 218 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 89, 98, 314, 808 |
| NaeI | GCCGGC | 1 cut(s) | 130 |
| NarI | GGCGCC | 1 cut(s) | 841 |
| NciI | CCSGG | 4 cut(s) | 236, 705, 726, 888 |
| NdeI | CATATG | 1 cut(s) | 796 |
| NdeII | GATC | 7 cut(s) | 532, 589, 667, 736, 790, 823, 864 |
| NgoMIV | GCCGGC | 1 cut(s) | 128 |
| NlaIII | CATG | 2 cut(s) | 25, 652 |
| NlaIV | GGNNCC | 4 cut(s) | 661, 842, 852, 866 |
| NsiI | ATGCAT | 1 cut(s) | 564 |
| NspI | RCATGY | 1 cut(s) | 652 |
| NspV | TTCGAA | 1 cut(s) | 248 |
| OliI | CACNNNNGTG | 1 cut(s) | 413 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 81 |
| PctI | GAATGC | 2 cut(s) | 564, 621 |
| PdiI | GCCGGC | 1 cut(s) | 130 |
| PdmI | GAANNNNTTC | 1 cut(s) | 619 |
| PfeI | GAWTC | 1 cut(s) | 421 |
| PflFI | GACNNNGTC | 1 cut(s) | 71 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 524, 581 |
| PfoI | TCCNGGA | 2 cut(s) | 598, 712 |
| PkrI | GCNGC | 5 cut(s) | 40, 103, 127, 134, 804 |
| PleI | GAGTC | 1 cut(s) | 463 |
| PluTI | GGCGCC | 1 cut(s) | 844 |
| PpsI | GAGTC | 1 cut(s) | 463 |
| Psp1406I | AACGTT | 1 cut(s) | 327 |
| PspN4I | GGNNCC | 4 cut(s) | 661, 842, 852, 866 |
| PspPI | GGNCC | 6 cut(s) | 497, 551, 602, 659, 800, 851 |
| PsuI | RGATCY | 1 cut(s) | 864 |
| PsyI | GACNNNGTC | 1 cut(s) | 71 |
| RsaI | GTAC | 1 cut(s) | 215 |
| RsaNI | GTAC | 1 cut(s) | 214 |
| RseI | CAYNNNNRTG | 1 cut(s) | 413 |
| SaqAI | TTAA | 2 cut(s) | 119, 396 |
| SatI | GCNGC | 5 cut(s) | 39, 102, 126, 133, 803 |
| Sau3AI | GATC | 7 cut(s) | 532, 589, 667, 736, 790, 823, 864 |
| Sau96I | GGNCC | 6 cut(s) | 497, 551, 602, 659, 800, 851 |
| SchI | GAGTC | 1 cut(s) | 464 |
| SduI | GDGCHC | 2 cut(s) | 508, 784 |
| SexAI | ACCWGGT | 1 cut(s) | 604 |
| SfaNI | GCATC | 2 cut(s) | 289, 571 |
| SfoI | GGCGCC | 1 cut(s) | 842 |
| SfuI | TTCGAA | 1 cut(s) | 248 |
| SinI | GGWCC | 2 cut(s) | 602, 659 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 413 |
| SmlI | CTYRAG | 1 cut(s) | 432 |
| SmoI | CTYRAG | 1 cut(s) | 432 |
| Sse9I | AATT | 3 cut(s) | 338, 379, 446 |
| SsiI | CCGC | 8 cut(s) | 26, 39, 55, 102, 126, 133, 375, 803 |
| SspDI | GGCGCC | 1 cut(s) | 840 |
| SspMI | CTAG | 4 cut(s) | 413, 567, 624, 910 |
| StyI | CCWWGG | 1 cut(s) | 566 |
| TaaI | ACNGT | 2 cut(s) | 335, 393 |
| TaiI | ACGT | 2 cut(s) | 330, 687 |
| TaqI | TCGA | 4 cut(s) | 248, 443, 490, 508 |
| TaqII | GACCGA | 1 cut(s) | 7 |
| TasI | AATT | 3 cut(s) | 338, 379, 446 |
| TauI | GCSGC | 5 cut(s) | 41, 104, 128, 135, 805 |
| TfiI | GAWTC | 1 cut(s) | 421 |
| Tru1I | TTAA | 2 cut(s) | 119, 396 |
| Tru9I | TTAA | 2 cut(s) | 119, 396 |
| TscAI | CASTG | 2 cut(s) | 338, 582 |
| TspRI | CASTG | 2 cut(s) | 338, 582 |
| Tth111I | GACNNNGTC | 1 cut(s) | 71 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 524, 581 |
| VpaK11BI | GGWCC | 2 cut(s) | 602, 659 |
| XapI | RAATTY | 1 cut(s) | 338 |
| XceI | RCATGY | 1 cut(s) | 652 |
| XmaJI | CCTAGG | 1 cut(s) | 566 |
| XmnI | GAANNNNTTC | 1 cut(s) | 619 |
| XspI | CTAG | 4 cut(s) | 413, 567, 624, 910 |
| Zsp2I | ATGCAT | 1 cut(s) | 564 |