NAD(P)H-binding
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 762, 1455 |
| AccI | GTMKAC | 2 cut(s) | 754, 1416 |
| AciI | CCGC | 2 cut(s) | 131, 1138 |
| AclI | AACGTT | 2 cut(s) | 179, 245 |
| AclWI | GGATC | 3 cut(s) | 183, 523, 1037 |
| AcsI | RAATTY | 3 cut(s) | 1001, 1209, 1326 |
| AcuI | CTGAAG | 1 cut(s) | 32 |
| AdeI | CACNNNGTG | 1 cut(s) | 326 |
| AfaI | GTAC | 6 cut(s) | 523, 539, 673, 849, 897, 1065 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 596, 1441, 1519 |
| AflII | CTTAAG | 1 cut(s) | 412 |
| AflIII | ACRYGT | 1 cut(s) | 1066 |
| AjnI | CCWGG | 2 cut(s) | 1055, 1102 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 202, 234, 1136, 1168 |
| AluBI | AGCT | 6 cut(s) | 22, 38, 733, 943, 1009, 1480 |
| AluI | AGCT | 6 cut(s) | 22, 38, 733, 943, 1009, 1480 |
| Alw26I | GTCTC | 5 cut(s) | 170, 297, 498, 1093, 1278 |
| AlwI | GGATC | 3 cut(s) | 183, 523, 1037 |
| Ama87I | CYCGRG | 2 cut(s) | 533, 919 |
| AoxI | GGCC | 4 cut(s) | 478, 872, 1091, 1229 |
| ApeKI | GCWGC | 3 cut(s) | 733, 940, 1337 |
| ApoI | RAATTY | 3 cut(s) | 1001, 1209, 1326 |
| AseI | ATTAAT | 1 cut(s) | 564 |
| AspLEI | GCGC | 1 cut(s) | 738 |
| AspS9I | GGNCC | 3 cut(s) | 479, 587, 710 |
| AsuC2I | CCSGG | 2 cut(s) | 482, 1090 |
| AsuHPI | GGTGA | 4 cut(s) | 54, 312, 758, 797 |
| AvaI | CYCGRG | 2 cut(s) | 533, 919 |
| AvaII | GGWCC | 2 cut(s) | 587, 710 |
| BbvCI | CCTCAGC | 1 cut(s) | 34 |
| BbvI | GCAGC | 3 cut(s) | 720, 952, 1324 |
| BccI | CCATC | 2 cut(s) | 646, 743 |
| BceAI | ACGGC | 1 cut(s) | 866 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1439, 1473 |
| BciT130I | CCWGG | 2 cut(s) | 1057, 1104 |
| BciVI | GTATCC | 1 cut(s) | 787 |
| BcnI | CCSGG | 2 cut(s) | 482, 1090 |
| BcoDI | GTCTC | 5 cut(s) | 170, 297, 498, 1093, 1278 |
| BfaI | CTAG | 3 cut(s) | 296, 324, 365 |
| BfmI | CTRYAG | 4 cut(s) | 938, 1077, 1514, 1539 |
| BfrI | CTTAAG | 1 cut(s) | 412 |
| BfuI | GTATCC | 1 cut(s) | 787 |
| BglII | AGATCT | 1 cut(s) | 1264 |
| BisI | GCNGC | 3 cut(s) | 734, 941, 1338 |
| BlsI | GCNGC | 3 cut(s) | 735, 942, 1339 |
| BmcAI | AGTACT | 2 cut(s) | 523, 539 |
| Bme1390I | CCNGG | 4 cut(s) | 482, 1057, 1090, 1104 |
| Bme18I | GGWCC | 2 cut(s) | 587, 710 |
| BmeT110I | CYCGRG | 2 cut(s) | 533, 919 |
| BmgT120I | GGNCC | 3 cut(s) | 479, 587, 710 |
| BmiI | GGNNCC | 1 cut(s) | 1251 |
| BmrFI | CCNGG | 4 cut(s) | 482, 1057, 1090, 1104 |
| BmsI | GCATC | 2 cut(s) | 417, 892 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1251, 1283 |
| BpmI | CTGGAG | 2 cut(s) | 393, 1278 |
| Bpu10I | CCTNAGC | 1 cut(s) | 34 |
| BpuMI | CCSGG | 2 cut(s) | 482, 1090 |
| BsaAI | YACGTR | 1 cut(s) | 1069 |
| BsaI | GGTCTC | 1 cut(s) | 1093 |
| BsaJI | CCNNGG | 2 cut(s) | 1055, 1279 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 596, 1441, 1519 |
| Bse1I | ACTGG | 6 cut(s) | 332, 385, 431, 721, 835, 1366 |
| BseBI | CCWGG | 2 cut(s) | 1057, 1104 |
| BseDI | CCNNGG | 2 cut(s) | 1055, 1279 |
| BseGI | GGATG | 1 cut(s) | 432 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 596, 1441, 1519 |
| BseMII | CTCAG | 4 cut(s) | 48, 1086, 1236, 1428 |
| BseNI | ACTGG | 6 cut(s) | 332, 385, 431, 721, 835, 1366 |
| BseRI | GAGGAG | 1 cut(s) | 1262 |
| BseXI | GCAGC | 3 cut(s) | 720, 952, 1324 |
| BshFI | GGCC | 4 cut(s) | 480, 874, 1093, 1231 |
| BsiHKCI | CYCGRG | 2 cut(s) | 533, 919 |
| BsiSI | CCGG | 2 cut(s) | 482, 1090 |
| BslFI | GGGAC | 2 cut(s) | 236, 614 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 596, 1441, 1519 |
| BsmAI | GTCTC | 5 cut(s) | 170, 297, 498, 1093, 1278 |
| BsmBI | CGTCTC | 1 cut(s) | 170 |
| BsmFI | GGGAC | 2 cut(s) | 236, 614 |
| BsnI | GGCC | 4 cut(s) | 480, 874, 1093, 1231 |
| Bso31I | GGTCTC | 1 cut(s) | 1093 |
| BsoBI | CYCGRG | 2 cut(s) | 533, 919 |
| Bsp1407I | TGTACA | 1 cut(s) | 1063 |
| Bsp143I | GATC | 8 cut(s) | 160, 188, 282, 528, 681, 1042, 1111, 1264 |
| BspACI | CCGC | 2 cut(s) | 131, 1138 |
| BspANI | GGCC | 4 cut(s) | 480, 874, 1093, 1231 |
| BspCNI | CTCAG | 4 cut(s) | 47, 1087, 1237, 1429 |
| BspLI | GGNNCC | 1 cut(s) | 1251 |
| BspMAI | CTGCAG | 2 cut(s) | 942, 1081 |
| BspPI | GGATC | 3 cut(s) | 183, 523, 1037 |
| BspTI | CTTAAG | 1 cut(s) | 412 |
| BspTNI | GGTCTC | 1 cut(s) | 1093 |
| BsrGI | TGTACA | 1 cut(s) | 1063 |
| BsrI | ACTGG | 6 cut(s) | 332, 385, 431, 721, 835, 1366 |
| BssECI | CCNNGG | 2 cut(s) | 1055, 1279 |
| BssMI | GATC | 8 cut(s) | 160, 188, 282, 528, 681, 1042, 1111, 1264 |
| BssT1I | CCWWGG | 1 cut(s) | 1279 |
| Bst2UI | CCWGG | 2 cut(s) | 1057, 1104 |
| Bst4CI | ACNGT | 6 cut(s) | 361, 799, 826, 847, 895, 1414 |
| Bst6I | CTCTTC | 4 cut(s) | 450, 1308, 1524, 1552 |
| BstAFI | CTTAAG | 1 cut(s) | 412 |
| BstAUI | TGTACA | 1 cut(s) | 1063 |
| BstBAI | YACGTR | 1 cut(s) | 1069 |
| BstC8I | GCNNGC | 3 cut(s) | 814, 1254, 1403 |
| BstDEI | CTNAG | 7 cut(s) | 34, 279, 513, 1095, 1115, 1245, 1437 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1517 |
| BstF5I | GGATG | 1 cut(s) | 432 |
| BstHHI | GCGC | 1 cut(s) | 738 |
| BstKTI | GATC | 8 cut(s) | 163, 191, 285, 531, 684, 1045, 1114, 1267 |
| BstMAI | GTCTC | 5 cut(s) | 170, 297, 498, 1093, 1278 |
| BstMBI | GATC | 8 cut(s) | 160, 188, 282, 528, 681, 1042, 1111, 1264 |
| BstNI | CCWGG | 2 cut(s) | 1057, 1104 |
| BstSCI | CCNGG | 4 cut(s) | 480, 1055, 1088, 1102 |
| BstSFI | CTRYAG | 4 cut(s) | 938, 1077, 1514, 1539 |
| BstV1I | GCAGC | 3 cut(s) | 720, 952, 1324 |
| BstX2I | RGATCY | 3 cut(s) | 188, 1042, 1264 |
| BstYI | RGATCY | 3 cut(s) | 188, 1042, 1264 |
| BsuI | GTATCC | 1 cut(s) | 787 |
| BsuRI | GGCC | 4 cut(s) | 480, 874, 1093, 1231 |
| BtsCI | GGATG | 1 cut(s) | 432 |
| BtsI | GCAGTG | 2 cut(s) | 703, 935 |
| BtsIMutI | CAGTG | 5 cut(s) | 357, 703, 822, 842, 935 |
| Cac8I | GCNNGC | 3 cut(s) | 814, 1254, 1403 |
| CfoI | GCGC | 1 cut(s) | 738 |
| Cfr13I | GGNCC | 3 cut(s) | 479, 587, 710 |
| Csp6I | GTAC | 6 cut(s) | 522, 538, 672, 848, 896, 1064 |
| CviQI | GTAC | 6 cut(s) | 522, 538, 672, 848, 896, 1064 |
| DdeI | CTNAG | 7 cut(s) | 34, 279, 513, 1095, 1115, 1245, 1437 |
| DpnI | GATC | 8 cut(s) | 162, 190, 284, 530, 683, 1044, 1113, 1266 |
| DpnII | GATC | 8 cut(s) | 160, 188, 282, 528, 681, 1042, 1111, 1264 |
| DraI | TTTAAA | 1 cut(s) | 727 |
| DraIII | CACNNNGTG | 1 cut(s) | 326 |
| Eam1104I | CTCTTC | 4 cut(s) | 450, 1308, 1524, 1552 |
| EarI | CTCTTC | 4 cut(s) | 450, 1308, 1524, 1552 |
| Eco130I | CCWWGG | 1 cut(s) | 1279 |
| Eco147I | AGGCCT | 1 cut(s) | 1231 |
| Eco31I | GGTCTC | 1 cut(s) | 1093 |
| Eco32I | GATATC | 1 cut(s) | 1305 |
| Eco47I | GGWCC | 2 cut(s) | 587, 710 |
| Eco57I | CTGAAG | 1 cut(s) | 32 |
| Eco88I | CYCGRG | 2 cut(s) | 533, 919 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1517 |
| EcoRI | GAATTC | 1 cut(s) | 1209 |
| EcoRII | CCWGG | 2 cut(s) | 1055, 1102 |
| EcoRV | GATATC | 1 cut(s) | 1305 |
| EcoT14I | CCWWGG | 1 cut(s) | 1279 |
| EcoT22I | ATGCAT | 1 cut(s) | 1475 |
| ErhI | CCWWGG | 1 cut(s) | 1279 |
| Esp3I | CGTCTC | 1 cut(s) | 170 |
| FaqI | GGGAC | 2 cut(s) | 236, 614 |
| FblI | GTMKAC | 2 cut(s) | 754, 1416 |
| Fnu4HI | GCNGC | 3 cut(s) | 734, 941, 1338 |
| FokI | GGATG | 1 cut(s) | 439 |
| Fsp4HI | GCNGC | 3 cut(s) | 734, 941, 1338 |
| FspBI | CTAG | 3 cut(s) | 296, 324, 365 |
| GlaI | GCGC | 1 cut(s) | 737 |
| GluI | GCNGC | 3 cut(s) | 734, 941, 1338 |
| GsuI | CTGGAG | 2 cut(s) | 393, 1278 |
| HaeIII | GGCC | 4 cut(s) | 480, 874, 1093, 1231 |
| HapII | CCGG | 2 cut(s) | 482, 1090 |
| HhaI | GCGC | 1 cut(s) | 738 |
| Hin6I | GCGC | 1 cut(s) | 736 |
| HinP1I | GCGC | 1 cut(s) | 736 |
| HincII | GTYRAC | 2 cut(s) | 406, 755 |
| HindII | GTYRAC | 2 cut(s) | 406, 755 |
| HinfI | GANTC | 3 cut(s) | 234, 290, 549 |
| HpaII | CCGG | 2 cut(s) | 482, 1090 |
| HphI | GGTGA | 4 cut(s) | 54, 312, 758, 797 |
| Hpy166II | GTNNAC | 7 cut(s) | 329, 406, 710, 755, 1066, 1121, 1417 |
| Hpy188I | TCNGA | 4 cut(s) | 160, 681, 777, 1038 |
| Hpy188III | TCNNGA | 8 cut(s) | 50, 207, 238, 553, 608, 1165, 1199, 1308 |
| Hpy8I | GTNNAC | 7 cut(s) | 329, 406, 710, 755, 1066, 1121, 1417 |
| Hpy99I | CGWCG | 1 cut(s) | 759 |
| HpyAV | CCTTC | 7 cut(s) | 102, 148, 390, 590, 989, 1174, 1435 |
| HpyCH4III | ACNGT | 6 cut(s) | 361, 799, 826, 847, 895, 1414 |
| HpyCH4IV | ACGT | 5 cut(s) | 179, 245, 757, 1068, 1370 |
| HpyCH4V | TGCA | 8 cut(s) | 887, 905, 940, 1079, 1238, 1340, 1466, 1473 |
| HpyF3I | CTNAG | 7 cut(s) | 34, 279, 513, 1095, 1115, 1245, 1437 |
| HpySE526I | ACGT | 5 cut(s) | 179, 245, 757, 1068, 1370 |
| HspAI | GCGC | 1 cut(s) | 736 |
| Kzo9I | GATC | 8 cut(s) | 160, 188, 282, 528, 681, 1042, 1111, 1264 |
| LmnI | GCTCC | 4 cut(s) | 374, 1014, 1249, 1259 |
| Lsp1109I | GCAGC | 3 cut(s) | 720, 952, 1324 |
| LweI | GCATC | 2 cut(s) | 417, 892 |
| MaeI | CTAG | 3 cut(s) | 296, 324, 365 |
| MaeII | ACGT | 5 cut(s) | 179, 245, 757, 1068, 1370 |
| MaeIII | GTNAC | 4 cut(s) | 318, 803, 933, 1084 |
| MalI | GATC | 8 cut(s) | 162, 190, 284, 530, 683, 1044, 1113, 1266 |
| MboI | GATC | 8 cut(s) | 160, 188, 282, 528, 681, 1042, 1111, 1264 |
| MfeI | CAATTG | 1 cut(s) | 1221 |
| MflI | RGATCY | 3 cut(s) | 188, 1042, 1264 |
| MluCI | AATT | 9 cut(s) | 305, 768, 1001, 1151, 1175, 1194, 1209, 1221, 1326 |
| MlyI | GAGTC | 2 cut(s) | 299, 558 |
| MmeI | TCCRAC | 2 cut(s) | 336, 481 |
| Mph1103I | ATGCAT | 1 cut(s) | 1475 |
| MspCI | CTTAAG | 1 cut(s) | 412 |
| MspI | CCGG | 2 cut(s) | 482, 1090 |
| MspR9I | CCNGG | 4 cut(s) | 482, 1057, 1090, 1104 |
| MunI | CAATTG | 1 cut(s) | 1221 |
| MvaI | CCWGG | 2 cut(s) | 1057, 1104 |
| NciI | CCSGG | 2 cut(s) | 482, 1090 |
| NdeII | GATC | 8 cut(s) | 160, 188, 282, 528, 681, 1042, 1111, 1264 |
| NlaIV | GGNNCC | 1 cut(s) | 1251 |
| NmuCI | GTSAC | 2 cut(s) | 318, 933 |
| NsiI | ATGCAT | 1 cut(s) | 1475 |
| PceI | AGGCCT | 1 cut(s) | 1231 |
| PfeI | GAWTC | 1 cut(s) | 234 |
| PkrI | GCNGC | 3 cut(s) | 735, 942, 1339 |
| PleI | GAGTC | 2 cut(s) | 298, 557 |
| PpsI | GAGTC | 2 cut(s) | 298, 557 |
| Ppu21I | YACGTR | 1 cut(s) | 1069 |
| PshBI | ATTAAT | 1 cut(s) | 564 |
| PsiI | TTATAA | 2 cut(s) | 762, 1455 |
| Psp1406I | AACGTT | 2 cut(s) | 179, 245 |
| Psp6I | CCWGG | 2 cut(s) | 1055, 1102 |
| PspGI | CCWGG | 2 cut(s) | 1055, 1102 |
| PspN4I | GGNNCC | 1 cut(s) | 1251 |
| PspPI | GGNCC | 3 cut(s) | 479, 587, 710 |
| PstI | CTGCAG | 2 cut(s) | 942, 1081 |
| PsuI | RGATCY | 3 cut(s) | 188, 1042, 1264 |
| RsaI | GTAC | 6 cut(s) | 523, 539, 673, 849, 897, 1065 |
| RsaNI | GTAC | 6 cut(s) | 522, 538, 672, 848, 896, 1064 |
| SalI | GTCGAC | 1 cut(s) | 753 |
| SatI | GCNGC | 3 cut(s) | 734, 941, 1338 |
| Sau3AI | GATC | 8 cut(s) | 160, 188, 282, 528, 681, 1042, 1111, 1264 |
| Sau96I | GGNCC | 3 cut(s) | 479, 587, 710 |
| ScaI | AGTACT | 2 cut(s) | 523, 539 |
| SchI | GAGTC | 2 cut(s) | 299, 558 |
| ScrFI | CCNGG | 4 cut(s) | 482, 1057, 1090, 1104 |
| SfaNI | GCATC | 2 cut(s) | 417, 892 |
| SfcI | CTRYAG | 4 cut(s) | 938, 1077, 1514, 1539 |
| SinI | GGWCC | 2 cut(s) | 587, 710 |
| SmlI | CTYRAG | 1 cut(s) | 412 |
| SmoI | CTYRAG | 1 cut(s) | 412 |
| Sse9I | AATT | 9 cut(s) | 305, 768, 1001, 1151, 1175, 1194, 1209, 1221, 1326 |
| SseBI | AGGCCT | 1 cut(s) | 1231 |
| SsiI | CCGC | 2 cut(s) | 131, 1138 |
| SspI | AATATT | 1 cut(s) | 928 |
| SspMI | CTAG | 3 cut(s) | 296, 324, 365 |
| StuI | AGGCCT | 1 cut(s) | 1231 |
| StyD4I | CCNGG | 4 cut(s) | 480, 1055, 1088, 1102 |
| StyI | CCWWGG | 1 cut(s) | 1279 |
| TaaI | ACNGT | 6 cut(s) | 361, 799, 826, 847, 895, 1414 |
| TaiI | ACGT | 5 cut(s) | 182, 248, 760, 1071, 1373 |
| TaqI | TCGA | 4 cut(s) | 394, 436, 684, 754 |
| TasI | AATT | 9 cut(s) | 305, 768, 1001, 1151, 1175, 1194, 1209, 1221, 1326 |
| TatI | WGTACW | 4 cut(s) | 521, 537, 671, 1063 |
| TfiI | GAWTC | 1 cut(s) | 234 |
| TscAI | CASTG | 5 cut(s) | 364, 703, 829, 842, 942 |
| TseFI | GTSAC | 2 cut(s) | 318, 933 |
| TseI | GCWGC | 3 cut(s) | 733, 940, 1337 |
| Tsp45I | GTSAC | 2 cut(s) | 318, 933 |
| TspDTI | ATGAA | 3 cut(s) | 48, 276, 468 |
| TspGWI | ACGGA | 1 cut(s) | 984 |
| TspRI | CASTG | 5 cut(s) | 364, 703, 829, 842, 942 |
| Vha464I | CTTAAG | 1 cut(s) | 412 |
| VpaK11BI | GGWCC | 2 cut(s) | 587, 710 |
| VspI | ATTAAT | 1 cut(s) | 564 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1517 |
| XapI | RAATTY | 3 cut(s) | 1001, 1209, 1326 |
| XmiI | GTMKAC | 2 cut(s) | 754, 1416 |
| XspI | CTAG | 3 cut(s) | 296, 324, 365 |
| ZrmI | AGTACT | 2 cut(s) | 523, 539 |
| Zsp2I | ATGCAT | 1 cut(s) | 1475 |