NAD(P)H-binding
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| CIA30 | PF08547 | 56 - 165 | 4e-30 | Complex I intermediate-associated protein 30 (CIA30) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 399 |
| AclWI | GGATC | 1 cut(s) | 351 |
| AcsI | RAATTY | 1 cut(s) | 82 |
| AcuI | CTGAAG | 1 cut(s) | 395 |
| AfaI | GTAC | 2 cut(s) | 68, 217 |
| AgsI | TTSAA | 2 cut(s) | 56, 119 |
| AluBI | AGCT | 3 cut(s) | 130, 179, 370 |
| AluI | AGCT | 3 cut(s) | 130, 179, 370 |
| AlwI | GGATC | 1 cut(s) | 351 |
| ApeKI | GCWGC | 1 cut(s) | 370 |
| ApoI | RAATTY | 1 cut(s) | 82 |
| AseI | ATTAAT | 1 cut(s) | 90 |
| AspLEI | GCGC | 1 cut(s) | 375 |
| AspS9I | GGNCC | 1 cut(s) | 254 |
| AsuHPI | GGTGA | 2 cut(s) | 395, 434 |
| AvaII | GGWCC | 1 cut(s) | 254 |
| AxyI | CCTNAGG | 1 cut(s) | 339 |
| BbvI | GCAGC | 1 cut(s) | 357 |
| BccI | CCATC | 3 cut(s) | 190, 353, 380 |
| BciVI | GTATCC | 1 cut(s) | 424 |
| BfuI | GTATCC | 1 cut(s) | 424 |
| BisI | GCNGC | 1 cut(s) | 371 |
| BlsI | GCNGC | 1 cut(s) | 372 |
| Bme18I | GGWCC | 1 cut(s) | 254 |
| BmgT120I | GGNCC | 1 cut(s) | 254 |
| BmsI | GCATC | 1 cut(s) | 321 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 332, 364 |
| BsaBI | GATNNNNATC | 1 cut(s) | 35 |
| Bse1I | ACTGG | 2 cut(s) | 265, 472 |
| Bse21I | CCTNAGG | 1 cut(s) | 339 |
| Bse8I | GATNNNNATC | 1 cut(s) | 35 |
| BseGI | GGATG | 2 cut(s) | 81, 190 |
| BseJI | GATNNNNATC | 1 cut(s) | 35 |
| BseMII | CTCAG | 1 cut(s) | 330 |
| BseNI | ACTGG | 2 cut(s) | 265, 472 |
| BseXI | GCAGC | 1 cut(s) | 357 |
| Bsp143I | GATC | 3 cut(s) | 36, 225, 343 |
| BspCNI | CTCAG | 1 cut(s) | 331 |
| BspPI | GGATC | 1 cut(s) | 351 |
| BsrI | ACTGG | 2 cut(s) | 265, 472 |
| BssMI | GATC | 3 cut(s) | 36, 225, 343 |
| Bst4CI | ACNGT | 4 cut(s) | 251, 299, 436, 463 |
| BstC8I | GCNNGC | 1 cut(s) | 451 |
| BstDEI | CTNAG | 1 cut(s) | 339 |
| BstF5I | GGATG | 2 cut(s) | 81, 190 |
| BstHHI | GCGC | 1 cut(s) | 375 |
| BstKTI | GATC | 3 cut(s) | 39, 228, 346 |
| BstMBI | GATC | 3 cut(s) | 36, 225, 343 |
| BstV1I | GCAGC | 1 cut(s) | 357 |
| BstX2I | RGATCY | 1 cut(s) | 343 |
| BstYI | RGATCY | 1 cut(s) | 343 |
| Bsu36I | CCTNAGG | 1 cut(s) | 339 |
| BsuI | GTATCC | 1 cut(s) | 424 |
| BtsCI | GGATG | 2 cut(s) | 81, 190 |
| BtsIMutI | CAGTG | 2 cut(s) | 459, 479 |
| Cac8I | GCNNGC | 1 cut(s) | 451 |
| CfoI | GCGC | 1 cut(s) | 375 |
| Cfr13I | GGNCC | 1 cut(s) | 254 |
| Csp6I | GTAC | 2 cut(s) | 67, 216 |
| CviJI | RGCY | 4 cut(s) | 130, 179, 370, 453 |
| CviKI_1 | RGCY | 4 cut(s) | 130, 179, 370, 453 |
| CviQI | GTAC | 2 cut(s) | 67, 216 |
| DdeI | CTNAG | 1 cut(s) | 339 |
| DpnI | GATC | 3 cut(s) | 38, 227, 345 |
| DpnII | GATC | 3 cut(s) | 36, 225, 343 |
| DraI | TTTAAA | 1 cut(s) | 271 |
| Eco47I | GGWCC | 1 cut(s) | 254 |
| Eco57I | CTGAAG | 1 cut(s) | 395 |
| Eco81I | CCTNAGG | 1 cut(s) | 339 |
| FaiI | YATR | 6 cut(s) | 144, 159, 355, 357, 365, 399 |
| FauNDI | CATATG | 1 cut(s) | 355 |
| Fnu4HI | GCNGC | 1 cut(s) | 371 |
| FokI | GGATG | 2 cut(s) | 88, 197 |
| Fsp4HI | GCNGC | 1 cut(s) | 371 |
| GlaI | GCGC | 1 cut(s) | 374 |
| GluI | GCNGC | 1 cut(s) | 371 |
| HhaI | GCGC | 1 cut(s) | 375 |
| Hin6I | GCGC | 1 cut(s) | 373 |
| HinP1I | GCGC | 1 cut(s) | 373 |
| HinfI | GANTC | 2 cut(s) | 5, 325 |
| HphI | GGTGA | 2 cut(s) | 395, 434 |
| Hpy166II | GTNNAC | 2 cut(s) | 254, 306 |
| Hpy188I | TCNGA | 3 cut(s) | 225, 317, 414 |
| Hpy188III | TCNNGA | 1 cut(s) | 338 |
| Hpy8I | GTNNAC | 2 cut(s) | 254, 306 |
| Hpy99I | CGWCG | 1 cut(s) | 396 |
| HpyAV | CCTTC | 1 cut(s) | 140 |
| HpyCH4III | ACNGT | 4 cut(s) | 251, 299, 436, 463 |
| HpyCH4IV | ACGT | 1 cut(s) | 69 |
| HpyCH4V | TGCA | 2 cut(s) | 290, 353 |
| HpyF3I | CTNAG | 1 cut(s) | 339 |
| HpySE526I | ACGT | 1 cut(s) | 69 |
| HspAI | GCGC | 1 cut(s) | 373 |
| Kzo9I | GATC | 3 cut(s) | 36, 225, 343 |
| LmnI | GCTCC | 1 cut(s) | 176 |
| LpnPI | CCDG | 4 cut(s) | 246, 351, 435, 485 |
| Lsp1109I | GCAGC | 1 cut(s) | 357 |
| LweI | GCATC | 1 cut(s) | 321 |
| MaeII | ACGT | 1 cut(s) | 69 |
| MaeIII | GTNAC | 1 cut(s) | 440 |
| MalI | GATC | 3 cut(s) | 38, 227, 345 |
| MboI | GATC | 3 cut(s) | 36, 225, 343 |
| MboII | GAAGA | 2 cut(s) | 46, 401 |
| MflI | RGATCY | 1 cut(s) | 343 |
| MluCI | AATT | 4 cut(s) | 82, 154, 164, 405 |
| MmeI | TCCRAC | 1 cut(s) | 91 |
| MnlI | CCTC | 1 cut(s) | 334 |
| MseI | TTAA | 3 cut(s) | 90, 270, 378 |
| NdeI | CATATG | 1 cut(s) | 355 |
| NdeII | GATC | 3 cut(s) | 36, 225, 343 |
| PfeI | GAWTC | 2 cut(s) | 5, 325 |
| PkrI | GCNGC | 1 cut(s) | 372 |
| PshBI | ATTAAT | 1 cut(s) | 90 |
| PsiI | TTATAA | 1 cut(s) | 399 |
| PspPI | GGNCC | 1 cut(s) | 254 |
| PsuI | RGATCY | 1 cut(s) | 343 |
| RsaI | GTAC | 2 cut(s) | 68, 217 |
| RsaNI | GTAC | 2 cut(s) | 67, 216 |
| SaqAI | TTAA | 3 cut(s) | 90, 270, 378 |
| SatI | GCNGC | 1 cut(s) | 371 |
| Sau3AI | GATC | 3 cut(s) | 36, 225, 343 |
| Sau96I | GGNCC | 1 cut(s) | 254 |
| SetI | ASST | 7 cut(s) | 63, 72, 132, 151, 181, 372, 385 |
| SfaNI | GCATC | 1 cut(s) | 321 |
| SgeI | CNNG | 9 cut(s) | 52, 65, 183, 273, 321, 350, 429, 462, 484 |
| SinI | GGWCC | 1 cut(s) | 254 |
| Sse9I | AATT | 4 cut(s) | 82, 154, 164, 405 |
| SspI | AATATT | 1 cut(s) | 22 |
| TaaI | ACNGT | 4 cut(s) | 251, 299, 436, 463 |
| TaiI | ACGT | 1 cut(s) | 72 |
| TaqI | TCGA | 1 cut(s) | 228 |
| TasI | AATT | 4 cut(s) | 82, 154, 164, 405 |
| TatI | WGTACW | 1 cut(s) | 215 |
| TfiI | GAWTC | 2 cut(s) | 5, 325 |
| Tru1I | TTAA | 3 cut(s) | 90, 270, 378 |
| Tru9I | TTAA | 3 cut(s) | 90, 270, 378 |
| TscAI | CASTG | 2 cut(s) | 466, 479 |
| TseI | GCWGC | 1 cut(s) | 370 |
| TspDTI | ATGAA | 4 cut(s) | 47, 92, 159, 258 |
| TspRI | CASTG | 2 cut(s) | 466, 479 |
| VpaK11BI | GGWCC | 1 cut(s) | 254 |
| VspI | ATTAAT | 1 cut(s) | 90 |
| XapI | RAATTY | 1 cut(s) | 82 |