NAD(P)H-binding
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 984 |
| AccI | GTMKAC | 1 cut(s) | 1638 |
| AciI | CCGC | 2 cut(s) | 98, 1360 |
| AclI | AACGTT | 1 cut(s) | 212 |
| AclWI | GGATC | 4 cut(s) | 150, 490, 936, 1259 |
| AcsI | RAATTY | 4 cut(s) | 667, 1223, 1431, 1548 |
| AdeI | CACNNNGTG | 1 cut(s) | 293 |
| AfaI | GTAC | 7 cut(s) | 490, 506, 653, 802, 1071, 1287, 1737 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 563, 1663 |
| AflII | CTTAAG | 1 cut(s) | 379 |
| AflIII | ACRYGT | 1 cut(s) | 1288 |
| AjnI | CCWGG | 2 cut(s) | 1277, 1324 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 169, 201, 1358, 1390 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 384, 416 |
| AluBI | AGCT | 5 cut(s) | 715, 764, 955, 1165, 1231 |
| AluI | AGCT | 5 cut(s) | 715, 764, 955, 1165, 1231 |
| Alw26I | GTCTC | 5 cut(s) | 137, 264, 465, 1315, 1500 |
| AlwI | GGATC | 4 cut(s) | 150, 490, 936, 1259 |
| Ama87I | CYCGRG | 2 cut(s) | 500, 1141 |
| AoxI | GGCC | 4 cut(s) | 445, 1094, 1313, 1451 |
| ApeKI | GCWGC | 3 cut(s) | 955, 1162, 1559 |
| ApoI | RAATTY | 4 cut(s) | 667, 1223, 1431, 1548 |
| AseI | ATTAAT | 2 cut(s) | 531, 675 |
| AspLEI | GCGC | 2 cut(s) | 960, 1129 |
| AspS9I | GGNCC | 3 cut(s) | 446, 554, 839 |
| AsuC2I | CCSGG | 1 cut(s) | 449 |
| AsuHPI | GGTGA | 5 cut(s) | 21, 279, 627, 980, 1019 |
| AvaI | CYCGRG | 2 cut(s) | 500, 1141 |
| AvaII | GGWCC | 2 cut(s) | 554, 839 |
| AxyI | CCTNAGG | 1 cut(s) | 924 |
| BbvI | GCAGC | 3 cut(s) | 942, 1174, 1546 |
| BccI | CCATC | 5 cut(s) | 775, 938, 965, 1184, 1691 |
| BceAI | ACGGC | 1 cut(s) | 1088 |
| BciT130I | CCWGG | 2 cut(s) | 1279, 1326 |
| BciVI | GTATCC | 1 cut(s) | 1009 |
| BcnI | CCSGG | 1 cut(s) | 449 |
| BcoDI | GTCTC | 5 cut(s) | 137, 264, 465, 1315, 1500 |
| BfaI | CTAG | 3 cut(s) | 263, 291, 332 |
| BfmI | CTRYAG | 2 cut(s) | 1160, 1299 |
| BfrI | CTTAAG | 1 cut(s) | 379 |
| BfuI | GTATCC | 1 cut(s) | 1009 |
| BglII | AGATCT | 1 cut(s) | 1486 |
| BisI | GCNGC | 3 cut(s) | 956, 1163, 1560 |
| BlsI | GCNGC | 3 cut(s) | 957, 1164, 1561 |
| BmcAI | AGTACT | 2 cut(s) | 490, 506 |
| Bme1390I | CCNGG | 3 cut(s) | 449, 1279, 1326 |
| Bme18I | GGWCC | 2 cut(s) | 554, 839 |
| BmeT110I | CYCGRG | 2 cut(s) | 500, 1141 |
| BmgT120I | GGNCC | 3 cut(s) | 446, 554, 839 |
| BmiI | GGNNCC | 1 cut(s) | 1473 |
| BmrFI | CCNGG | 3 cut(s) | 449, 1279, 1326 |
| BmrI | ACTGGG | 1 cut(s) | 1229 |
| BmsI | GCATC | 2 cut(s) | 906, 1114 |
| BmuI | ACTGGG | 1 cut(s) | 1229 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1473, 1505 |
| BpmI | CTGGAG | 2 cut(s) | 360, 1500 |
| BpuMI | CCSGG | 1 cut(s) | 449 |
| BsaAI | YACGTR | 1 cut(s) | 1291 |
| BsaI | GGTCTC | 1 cut(s) | 1315 |
| BsaJI | CCNNGG | 3 cut(s) | 595, 1277, 1501 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 563, 1663 |
| Bse1I | ACTGG | 8 cut(s) | 299, 352, 398, 850, 1057, 1235, 1588, 1739 |
| Bse21I | CCTNAGG | 1 cut(s) | 924 |
| BseBI | CCWGG | 2 cut(s) | 1279, 1326 |
| BseDI | CCNNGG | 3 cut(s) | 595, 1277, 1501 |
| BseGI | GGATG | 2 cut(s) | 666, 1702 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 563, 1663 |
| BseMII | CTCAG | 4 cut(s) | 915, 1308, 1458, 1650 |
| BseNI | ACTGG | 8 cut(s) | 299, 352, 398, 850, 1057, 1235, 1588, 1739 |
| BseRI | GAGGAG | 1 cut(s) | 1484 |
| BseXI | GCAGC | 3 cut(s) | 942, 1174, 1546 |
| BshFI | GGCC | 4 cut(s) | 447, 1096, 1315, 1453 |
| BsiHKCI | CYCGRG | 2 cut(s) | 500, 1141 |
| BsiSI | CCGG | 1 cut(s) | 449 |
| BslFI | GGGAC | 2 cut(s) | 203, 581 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 563, 1663 |
| BsmAI | GTCTC | 5 cut(s) | 137, 264, 465, 1315, 1500 |
| BsmBI | CGTCTC | 1 cut(s) | 137 |
| BsmFI | GGGAC | 2 cut(s) | 203, 581 |
| BsmI | GAATGC | 1 cut(s) | 399 |
| BsnI | GGCC | 4 cut(s) | 447, 1096, 1315, 1453 |
| Bso31I | GGTCTC | 1 cut(s) | 1315 |
| BsoBI | CYCGRG | 2 cut(s) | 500, 1141 |
| Bsp1407I | TGTACA | 1 cut(s) | 1285 |
| BspACI | CCGC | 2 cut(s) | 98, 1360 |
| BspANI | GGCC | 4 cut(s) | 447, 1096, 1315, 1453 |
| BspCNI | CTCAG | 4 cut(s) | 916, 1309, 1459, 1651 |
| BspLI | GGNNCC | 1 cut(s) | 1473 |
| BspMAI | CTGCAG | 2 cut(s) | 1164, 1303 |
| BspPI | GGATC | 4 cut(s) | 150, 490, 936, 1259 |
| BspTI | CTTAAG | 1 cut(s) | 379 |
| BspTNI | GGTCTC | 1 cut(s) | 1315 |
| BsrGI | TGTACA | 1 cut(s) | 1285 |
| BsrI | ACTGG | 8 cut(s) | 299, 352, 398, 850, 1057, 1235, 1588, 1739 |
| BssECI | CCNNGG | 3 cut(s) | 595, 1277, 1501 |
| BssT1I | CCWWGG | 2 cut(s) | 595, 1501 |
| Bst2UI | CCWGG | 2 cut(s) | 1279, 1326 |
| Bst4CI | ACNGT | 7 cut(s) | 328, 884, 1021, 1048, 1069, 1117, 1636 |
| Bst6I | CTCTTC | 2 cut(s) | 417, 1530 |
| BstAFI | CTTAAG | 1 cut(s) | 379 |
| BstAUI | TGTACA | 1 cut(s) | 1285 |
| BstBAI | YACGTR | 1 cut(s) | 1291 |
| BstC8I | GCNNGC | 2 cut(s) | 1036, 1476 |
| BstDEI | CTNAG | 8 cut(s) | 246, 480, 924, 1317, 1337, 1467, 1659, 1720 |
| BstF5I | GGATG | 2 cut(s) | 666, 1702 |
| BstHHI | GCGC | 2 cut(s) | 960, 1129 |
| BstMAI | GTCTC | 5 cut(s) | 137, 264, 465, 1315, 1500 |
| BstNI | CCWGG | 2 cut(s) | 1279, 1326 |
| BstSCI | CCNGG | 3 cut(s) | 447, 1277, 1324 |
| BstSFI | CTRYAG | 2 cut(s) | 1160, 1299 |
| BstV1I | GCAGC | 3 cut(s) | 942, 1174, 1546 |
| BstX2I | RGATCY | 4 cut(s) | 155, 928, 1264, 1486 |
| BstYI | RGATCY | 4 cut(s) | 155, 928, 1264, 1486 |
| Bsu36I | CCTNAGG | 1 cut(s) | 924 |
| BsuI | GTATCC | 1 cut(s) | 1009 |
| BsuRI | GGCC | 4 cut(s) | 447, 1096, 1315, 1453 |
| BtsCI | GGATG | 2 cut(s) | 666, 1702 |
| BtsI | GCAGTG | 2 cut(s) | 870, 1157 |
| BtsIMutI | CAGTG | 5 cut(s) | 324, 870, 1044, 1064, 1157 |
| Cac8I | GCNNGC | 2 cut(s) | 1036, 1476 |
| CfoI | GCGC | 2 cut(s) | 960, 1129 |
| Cfr13I | GGNCC | 3 cut(s) | 446, 554, 839 |
| Csp6I | GTAC | 7 cut(s) | 489, 505, 652, 801, 1070, 1286, 1736 |
| CviQI | GTAC | 7 cut(s) | 489, 505, 652, 801, 1070, 1286, 1736 |
| DdeI | CTNAG | 8 cut(s) | 246, 480, 924, 1317, 1337, 1467, 1659, 1720 |
| DraI | TTTAAA | 2 cut(s) | 856, 1684 |
| DraIII | CACNNNGTG | 1 cut(s) | 293 |
| Eam1104I | CTCTTC | 2 cut(s) | 417, 1530 |
| EarI | CTCTTC | 2 cut(s) | 417, 1530 |
| Eco130I | CCWWGG | 2 cut(s) | 595, 1501 |
| Eco147I | AGGCCT | 2 cut(s) | 1096, 1453 |
| Eco31I | GGTCTC | 1 cut(s) | 1315 |
| Eco32I | GATATC | 1 cut(s) | 1527 |
| Eco47I | GGWCC | 2 cut(s) | 554, 839 |
| Eco81I | CCTNAGG | 1 cut(s) | 924 |
| Eco88I | CYCGRG | 2 cut(s) | 500, 1141 |
| EcoRI | GAATTC | 1 cut(s) | 1431 |
| EcoRII | CCWGG | 2 cut(s) | 1277, 1324 |
| EcoRV | GATATC | 1 cut(s) | 1527 |
| EcoT14I | CCWWGG | 2 cut(s) | 595, 1501 |
| ErhI | CCWWGG | 2 cut(s) | 595, 1501 |
| Esp3I | CGTCTC | 1 cut(s) | 137 |
| FaqI | GGGAC | 2 cut(s) | 203, 581 |
| FauNDI | CATATG | 2 cut(s) | 940, 1594 |
| FblI | GTMKAC | 1 cut(s) | 1638 |
| Fnu4HI | GCNGC | 3 cut(s) | 956, 1163, 1560 |
| FokI | GGATG | 2 cut(s) | 673, 1709 |
| Fsp4HI | GCNGC | 3 cut(s) | 956, 1163, 1560 |
| FspBI | CTAG | 3 cut(s) | 263, 291, 332 |
| GlaI | GCGC | 2 cut(s) | 959, 1128 |
| GluI | GCNGC | 3 cut(s) | 956, 1163, 1560 |
| GsuI | CTGGAG | 2 cut(s) | 360, 1500 |
| HaeIII | GGCC | 4 cut(s) | 447, 1096, 1315, 1453 |
| HapII | CCGG | 1 cut(s) | 449 |
| HhaI | GCGC | 2 cut(s) | 960, 1129 |
| Hin6I | GCGC | 2 cut(s) | 958, 1127 |
| HinP1I | GCGC | 2 cut(s) | 958, 1127 |
| HincII | GTYRAC | 1 cut(s) | 373 |
| HindII | GTYRAC | 1 cut(s) | 373 |
| HinfI | GANTC | 5 cut(s) | 201, 257, 516, 632, 910 |
| HpaII | CCGG | 1 cut(s) | 449 |
| HphI | GGTGA | 5 cut(s) | 21, 279, 627, 980, 1019 |
| Hpy166II | GTNNAC | 8 cut(s) | 296, 373, 839, 891, 1288, 1343, 1639, 1678 |
| Hpy188I | TCNGA | 7 cut(s) | 127, 141, 810, 902, 999, 1123, 1260 |
| Hpy188III | TCNNGA | 8 cut(s) | 174, 205, 520, 575, 923, 1387, 1421, 1530 |
| Hpy8I | GTNNAC | 8 cut(s) | 296, 373, 839, 891, 1288, 1343, 1639, 1678 |
| Hpy99I | CGWCG | 1 cut(s) | 981 |
| HpyAV | CCTTC | 9 cut(s) | 69, 115, 357, 557, 725, 1211, 1396, 1657, 1687 |
| HpyCH4III | ACNGT | 7 cut(s) | 328, 884, 1021, 1048, 1069, 1117, 1636 |
| HpyCH4IV | ACGT | 3 cut(s) | 146, 212, 1290 |
| HpyCH4V | TGCA | 8 cut(s) | 16, 875, 938, 1109, 1162, 1301, 1460, 1562 |
| HpyF3I | CTNAG | 8 cut(s) | 246, 480, 924, 1317, 1337, 1467, 1659, 1720 |
| HpySE526I | ACGT | 3 cut(s) | 146, 212, 1290 |
| HspAI | GCGC | 2 cut(s) | 958, 1127 |
| LmnI | GCTCC | 5 cut(s) | 341, 761, 1236, 1471, 1481 |
| Lsp1109I | GCAGC | 3 cut(s) | 942, 1174, 1546 |
| LweI | GCATC | 2 cut(s) | 906, 1114 |
| MaeI | CTAG | 3 cut(s) | 263, 291, 332 |
| MaeII | ACGT | 3 cut(s) | 146, 212, 1290 |
| MaeIII | GTNAC | 4 cut(s) | 285, 1025, 1155, 1306 |
| MboII | GAAGA | 7 cut(s) | 71, 211, 214, 397, 434, 1077, 1547 |
| MfeI | CAATTG | 1 cut(s) | 1443 |
| MflI | RGATCY | 4 cut(s) | 155, 928, 1264, 1486 |
| MlyI | GAGTC | 2 cut(s) | 266, 525 |
| MmeI | TCCRAC | 3 cut(s) | 303, 448, 676 |
| MslI | CAYNNNNRTG | 1 cut(s) | 659 |
| MspCI | CTTAAG | 1 cut(s) | 379 |
| MspI | CCGG | 1 cut(s) | 449 |
| MspR9I | CCNGG | 3 cut(s) | 449, 1279, 1326 |
| MunI | CAATTG | 1 cut(s) | 1443 |
| Mva1269I | GAATGC | 1 cut(s) | 399 |
| MvaI | CCWGG | 2 cut(s) | 1279, 1326 |
| NciI | CCSGG | 1 cut(s) | 449 |
| NdeI | CATATG | 2 cut(s) | 940, 1594 |
| NlaIV | GGNNCC | 1 cut(s) | 1473 |
| NmeAIII | GCCGAG | 1 cut(s) | 1291 |
| NmuCI | GTSAC | 2 cut(s) | 285, 1155 |
| PceI | AGGCCT | 2 cut(s) | 1096, 1453 |
| PctI | GAATGC | 1 cut(s) | 399 |
| PfeI | GAWTC | 3 cut(s) | 201, 632, 910 |
| PkrI | GCNGC | 3 cut(s) | 957, 1164, 1561 |
| PleI | GAGTC | 2 cut(s) | 265, 524 |
| PpsI | GAGTC | 2 cut(s) | 265, 524 |
| Ppu21I | YACGTR | 1 cut(s) | 1291 |
| PshBI | ATTAAT | 2 cut(s) | 531, 675 |
| PsiI | TTATAA | 1 cut(s) | 984 |
| Psp1406I | AACGTT | 1 cut(s) | 212 |
| Psp6I | CCWGG | 2 cut(s) | 1277, 1324 |
| PspGI | CCWGG | 2 cut(s) | 1277, 1324 |
| PspN4I | GGNNCC | 1 cut(s) | 1473 |
| PspPI | GGNCC | 3 cut(s) | 446, 554, 839 |
| PstI | CTGCAG | 2 cut(s) | 1164, 1303 |
| PsuI | RGATCY | 4 cut(s) | 155, 928, 1264, 1486 |
| RsaI | GTAC | 7 cut(s) | 490, 506, 653, 802, 1071, 1287, 1737 |
| RsaNI | GTAC | 7 cut(s) | 489, 505, 652, 801, 1070, 1286, 1736 |
| RseI | CAYNNNNRTG | 1 cut(s) | 659 |
| SatI | GCNGC | 3 cut(s) | 956, 1163, 1560 |
| Sau96I | GGNCC | 3 cut(s) | 446, 554, 839 |
| ScaI | AGTACT | 2 cut(s) | 490, 506 |
| SchI | GAGTC | 2 cut(s) | 266, 525 |
| ScrFI | CCNGG | 3 cut(s) | 449, 1279, 1326 |
| SfaNI | GCATC | 2 cut(s) | 906, 1114 |
| SfcI | CTRYAG | 2 cut(s) | 1160, 1299 |
| SinI | GGWCC | 2 cut(s) | 554, 839 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 659 |
| SmlI | CTYRAG | 1 cut(s) | 379 |
| SmoI | CTYRAG | 1 cut(s) | 379 |
| SseBI | AGGCCT | 2 cut(s) | 1096, 1453 |
| SsiI | CCGC | 2 cut(s) | 98, 1360 |
| SspI | AATATT | 1 cut(s) | 1150 |
| SspMI | CTAG | 3 cut(s) | 263, 291, 332 |
| StuI | AGGCCT | 2 cut(s) | 1096, 1453 |
| StyD4I | CCNGG | 3 cut(s) | 447, 1277, 1324 |
| StyI | CCWWGG | 2 cut(s) | 595, 1501 |
| TaaI | ACNGT | 7 cut(s) | 328, 884, 1021, 1048, 1069, 1117, 1636 |
| TaiI | ACGT | 3 cut(s) | 149, 215, 1293 |
| TaqI | TCGA | 3 cut(s) | 361, 403, 813 |
| TatI | WGTACW | 5 cut(s) | 488, 504, 651, 800, 1285 |
| TfiI | GAWTC | 3 cut(s) | 201, 632, 910 |
| TscAI | CASTG | 5 cut(s) | 331, 877, 1051, 1064, 1164 |
| TseFI | GTSAC | 2 cut(s) | 285, 1155 |
| TseI | GCWGC | 3 cut(s) | 955, 1162, 1559 |
| Tsp45I | GTSAC | 2 cut(s) | 285, 1155 |
| TspDTI | ATGAA | 5 cut(s) | 15, 243, 435, 677, 744 |
| TspRI | CASTG | 5 cut(s) | 331, 877, 1051, 1064, 1164 |
| Vha464I | CTTAAG | 1 cut(s) | 379 |
| VpaK11BI | GGWCC | 2 cut(s) | 554, 839 |
| VspI | ATTAAT | 2 cut(s) | 531, 675 |
| XapI | RAATTY | 4 cut(s) | 667, 1223, 1431, 1548 |
| XmiI | GTMKAC | 1 cut(s) | 1638 |
| XspI | CTAG | 3 cut(s) | 263, 291, 332 |
| ZrmI | AGTACT | 2 cut(s) | 490, 506 |