Rmu_sc0000361.1_g000004

protein desumoylation

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000361.1
Physical Location & Seq
Reverse (-)
24494 .. 27606
3113 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000361.1_g000004.1.cds

Sequence Viewer

Length: 1662 bp
atgtgcgaagtggacttcggacctcaacttcagaattcagatgataatgttggtgcgaagatgggcgaagatgttggtttgaatgaaggttgttatggatggggacatgacaacagaacgacgaaaaggcaaaatttctcggttgggcacggtaaacatccctcatggaagtcgcgtctcatatcaccaggggactttgttgacagtattaaaaggctccgcaggtcacacttgatggctgctgccggtattggtctaggcaatctagatctaattggatgcacaagtgtgtatgatgacgtttgcagtatgatggtccgtagtctagaccccttgaatgagagagtcaccatacatggcaagcatttcgatgtaagaccaagtgatttctcccggataatggggatatgtgatggagttgaagatgtggagttaagtggatcaatcaatgatgtaagggtgctaagtttacggaagtatttggcaattggtcacggggaagtcgacattcaccatgtgaagaatttaatgctggaacgacacaccccggatgacactttcaaggtggcatacgccctgtatgctttgtccactttgttgtgcccgaatggctccaatgtcatagaccaatcattggtcttcccccttgtagatacggacaaaataaatcaaaagaattgggcgactttttgttactccaagctcatggagtcagtaatgacaatgcagtccacatcgtataggcaagagtgtggttgtatgctatttctccaagtattttattttgagtccgttgcatggggatcaaagtgggtagacaagcgacttactcctttgcatgcatggacgaaaaaggacgttatgaagttgttgctttttgtagaaaagcatggtttttcatggcagcacaatgaaaccaaaattaatcaacctaagcagacaaggcataaggcagttggacaaaatagtggggcggagaatctatttatgaagaacatggaagctgttgcggttgacgtaaatgccctgtatgcgcaattagttggaatggaggaaagggtcggaggtttggaaccagcttttgtgaagatggcggaagcgatggaggacatgaaaacaatgttgcactcatttaagaaggacgctgtcaagaacattgtggagcaggttatttcaatattagggacccgaaatacagcgaagggagctacaaaggaaggatatgatttcaagtcagatgctaattatgctgaagcgtatagggaatcagagggccactctaatgaagtgccaaaccatttggtaccattgaaaaaaagacgccgaaaccatcttcctgatgaggtcggttcggagcttcaaacaagaaacaaagaggcatcgtgttcaatcaaagtgttcgacgagcccaaacggcccaccgaaaccggcaaaaaggggaatgaaggaaaagaatcgaaggggtttgacaatgaggtggtggctagttgtgatggttggagtgcgacacgatcagacctggagtgtctatggccagaaacctgcttggatgacattgtaataaacttgtttgcaagctatttgaatgggcgtgactccgtcgactggtattttccaacctactttgcggtaaggacgttctttggttgtggtgatgtttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

553

Amino Acids

62.22

Weight (kDa)

6.08

Isoelectric Point (pI)

37.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 727
Acc16I TGCGCA 1 cut(s) 1035
Acc36I ACCTGC 3 cut(s) 213, 1156, 1550
Acc65I GGTACC 1 cut(s) 1303
AccB1I GGYRCC 1 cut(s) 1303
AccB7I CCANNNNNTGG 1 cut(s) 634
AccI GTMKAC 3 cut(s) 504, 816, 1602
AccII CGCG 1 cut(s) 175
AciI CCGC 5 cut(s) 220, 974, 1010, 1094, 1628
AclWI GGATC 2 cut(s) 448, 811
AcoI YGGCCR 1 cut(s) 1532
AcsI RAATTY 3 cut(s) 34, 133, 523
AcuI CTGAAG 2 cut(s) 14, 1272
AcyI GRCGYC 1 cut(s) 1321
AdeI CACNNNGTG 1 cut(s) 517
AfaI GTAC 1 cut(s) 1305
AfiI CCNNNNNNNGG 4 cut(s) 400, 634, 798, 1605
AjnI CCWGG 2 cut(s) 187, 1518
AleI CACNNNNGTG 1 cut(s) 287
AluBI AGCT 6 cut(s) 703, 1004, 1079, 1208, 1357, 1578
AluI AGCT 6 cut(s) 703, 1004, 1079, 1208, 1357, 1578
Alw26I GTCTC 1 cut(s) 182
AlwI GGATC 2 cut(s) 448, 811
AoxI GGCC 3 cut(s) 1273, 1415, 1532
ApeKI GCWGC 3 cut(s) 239, 242, 904
ApoI RAATTY 3 cut(s) 34, 133, 523
AseI ATTAAT 1 cut(s) 924
Asp718I GGTACC 1 cut(s) 1303
AspLEI GCGC 1 cut(s) 1036
AspS9I GGNCC 5 cut(s) 20, 316, 1185, 1273, 1416
AsuC2I CCSGG 2 cut(s) 394, 548
AsuHPI GGTGA 3 cut(s) 177, 340, 503
AvaII GGWCC 3 cut(s) 20, 316, 1185
BaeGI GKGCMC 2 cut(s) 150, 605
BalI TGGCCA 1 cut(s) 1534
BanI GGYRCC 1 cut(s) 1303
BanII GRGCYC 1 cut(s) 1410
BbsI GAAGAC 1 cut(s) 631
BbvI GCAGC 3 cut(s) 226, 229, 916
BccI CCATC 9 cut(s) 55, 93, 229, 307, 407, 1084, 1096, 1338, 1487
BceAI ACGGC 1 cut(s) 1430
BcgI CGANNNNNNTGC 2 cut(s) 349, 383
BciT130I CCWGG 2 cut(s) 189, 1520
BcnI CCSGG 2 cut(s) 394, 548
BcoDI GTCTC 1 cut(s) 182
BfaI CTAG 4 cut(s) 257, 266, 326, 1485
BfuAI ACCTGC 3 cut(s) 213, 1156, 1550
BglI GCCNNNNNGGC 2 cut(s) 609, 1414
BglII AGATCT 1 cut(s) 268
BisI GCNGC 3 cut(s) 240, 243, 905
BlsI GCNGC 3 cut(s) 241, 244, 906
Bme1390I CCNGG 4 cut(s) 189, 394, 548, 1520
Bme18I GGWCC 3 cut(s) 20, 316, 1185
BmgT120I GGNCC 5 cut(s) 20, 316, 1185, 1273, 1416
BmiI GGNNCC 6 cut(s) 218, 613, 1074, 1186, 1187, 1305
BmrFI CCNGG 4 cut(s) 189, 394, 548, 1520
BmsI GCATC 3 cut(s) 269, 1228, 1388
BpiI GAAGAC 1 cut(s) 631
BplI GAGNNNNNCTC 2 cut(s) 1262, 1294
BpmI CTGGAG 1 cut(s) 1541
Bpu10I CCTNAGC 1 cut(s) 933
BpuMI CCSGG 2 cut(s) 394, 548
BsaHI GRCGYC 1 cut(s) 1321
BsaJI CCNNGG 2 cut(s) 188, 546
Bsc4I CCNNNNNNNGG 4 cut(s) 400, 634, 798, 1605
Bse118I RCCGGY 2 cut(s) 245, 1427
Bse1I ACTGG 1 cut(s) 1610
BseBI CCWGG 2 cut(s) 189, 1520
BseDI CCNNGG 2 cut(s) 188, 546
BseGI GGATG 5 cut(s) 104, 157, 284, 556, 1555
BseLI CCNNNNNNNGG 4 cut(s) 400, 634, 798, 1605
BseNI ACTGG 1 cut(s) 1610
BseSI GKGCMC 2 cut(s) 150, 605
BseXI GCAGC 3 cut(s) 226, 229, 916
Bsh1236I CGCG 1 cut(s) 175
BshFI GGCC 3 cut(s) 1275, 1417, 1534
BshNI GGYRCC 1 cut(s) 1303
BsiSI CCGG 4 cut(s) 246, 394, 548, 1428
BslFI GGGAC 3 cut(s) 117, 206, 1198
BslI CCNNNNNNNGG 4 cut(s) 400, 634, 798, 1605
BsmAI GTCTC 1 cut(s) 182
BsmBI CGTCTC 1 cut(s) 182
BsmFI GGGAC 3 cut(s) 117, 206, 1198
BsnI GGCC 3 cut(s) 1275, 1417, 1534
Bsp1286I GDGCHC 3 cut(s) 150, 605, 1410
Bsp143I GATC 4 cut(s) 268, 440, 803, 1511
BspACI CCGC 5 cut(s) 220, 974, 1010, 1094, 1628
BspANI GGCC 3 cut(s) 1275, 1417, 1534
BspFNI CGCG 1 cut(s) 175
BspLI GGNNCC 6 cut(s) 218, 613, 1074, 1186, 1187, 1305
BspMI ACCTGC 3 cut(s) 213, 1156, 1550
BspPI GGATC 2 cut(s) 448, 811
BspT107I GGYRCC 1 cut(s) 1303
BsrFI RCCGGY 2 cut(s) 245, 1427
BsrI ACTGG 1 cut(s) 1610
BssAI RCCGGY 2 cut(s) 245, 1427
BssECI CCNNGG 2 cut(s) 188, 546
BssMI GATC 4 cut(s) 268, 440, 803, 1511
BssNI GRCGYC 1 cut(s) 1321
Bst2UI CCWGG 2 cut(s) 189, 1520
Bst4CI ACNGT 2 cut(s) 152, 206
BstACI GRCGYC 1 cut(s) 1321
BstC8I GCNNGC 3 cut(s) 362, 840, 1576
BstDEI CTNAG 2 cut(s) 464, 933
BstF5I GGATG 5 cut(s) 104, 157, 284, 556, 1555
BstFNI CGCG 1 cut(s) 175
BstHHI GCGC 1 cut(s) 1036
BstKTI GATC 4 cut(s) 271, 443, 806, 1514
BstMAI GTCTC 1 cut(s) 182
BstMBI GATC 4 cut(s) 268, 440, 803, 1511
BstMWI GCNNNNNNNGC 7 cut(s) 581, 609, 943, 1031, 1205, 1247, 1414
BstNI CCWGG 2 cut(s) 189, 1520
BstNSI RCATGY 1 cut(s) 842
BstSCI CCNGG 4 cut(s) 187, 392, 546, 1518
BstSLI GKGCMC 2 cut(s) 150, 605
BstUI CGCG 1 cut(s) 175
BstV1I GCAGC 3 cut(s) 226, 229, 916
BstV2I GAAGAC 1 cut(s) 631
BstX2I RGATCY 1 cut(s) 268
BstXI CCANNNNNNTGG 1 cut(s) 706
BstYI RGATCY 1 cut(s) 268
BsuRI GGCC 3 cut(s) 1275, 1417, 1534
BtgZI GCGATG 1 cut(s) 1115
BtsCI GGATG 5 cut(s) 104, 157, 284, 556, 1555
BveI ACCTGC 3 cut(s) 213, 1156, 1550
Cac8I GCNNGC 3 cut(s) 362, 840, 1576
CfoI GCGC 1 cut(s) 1036
Cfr10I RCCGGY 2 cut(s) 245, 1427
Cfr13I GGNCC 5 cut(s) 20, 316, 1185, 1273, 1416
CseI GACGC 3 cut(s) 164, 1151, 1329
Csp6I GTAC 1 cut(s) 1304
CviQI GTAC 1 cut(s) 1304
DdeI CTNAG 2 cut(s) 464, 933
DpnI GATC 4 cut(s) 270, 442, 805, 1513
DpnII GATC 4 cut(s) 268, 440, 803, 1511
DraIII CACNNNGTG 1 cut(s) 517
DrdI GACNNNNNNGTC 1 cut(s) 727
DseDI GACNNNNNNGTC 1 cut(s) 727
EaeI YGGCCR 1 cut(s) 1532
EciI GGCGGA 2 cut(s) 989, 1109
Eco24I GRGCYC 1 cut(s) 1410
Eco47I GGWCC 3 cut(s) 20, 316, 1185
Eco57I CTGAAG 2 cut(s) 14, 1272
EcoO109I RGGNCCY 1 cut(s) 1185
EcoRI GAATTC 1 cut(s) 34
EcoRII CCWGG 2 cut(s) 187, 1518
EcoT22I ATGCAT 1 cut(s) 844
EcoT38I GRGCYC 1 cut(s) 1410
Esp3I CGTCTC 1 cut(s) 182
FaqI GGGAC 3 cut(s) 117, 206, 1198
FblI GTMKAC 3 cut(s) 504, 816, 1602
Fnu4HI GCNGC 3 cut(s) 240, 243, 905
FokI GGATG 5 cut(s) 111, 144, 291, 563, 1562
FriOI GRGCYC 1 cut(s) 1410
Fsp4HI GCNGC 3 cut(s) 240, 243, 905
FspBI CTAG 4 cut(s) 257, 266, 326, 1485
FspI TGCGCA 1 cut(s) 1035
GlaI GCGC 1 cut(s) 1035
GluI GCNGC 3 cut(s) 240, 243, 905
GsuI CTGGAG 1 cut(s) 1541
HaeIII GGCC 3 cut(s) 1275, 1417, 1534
HapII CCGG 4 cut(s) 246, 394, 548, 1428
HgaI GACGC 3 cut(s) 164, 1151, 1329
HhaI GCGC 1 cut(s) 1036
Hin1I GRCGYC 1 cut(s) 1321
Hin6I GCGC 1 cut(s) 1034
HinP1I GCGC 1 cut(s) 1034
HincII GTYRAC 4 cut(s) 202, 505, 1015, 1603
HindII GTYRAC 4 cut(s) 202, 505, 1015, 1603
HinfI GANTC 7 cut(s) 345, 710, 788, 979, 1265, 1454, 1595
HpaII CCGG 4 cut(s) 246, 394, 548, 1428
HphI GGTGA 3 cut(s) 177, 340, 503
Hpy188I TCNGA 8 cut(s) 20, 33, 40, 1064, 1237, 1270, 1354, 1516
Hpy188III TCNNGA 4 cut(s) 266, 326, 1150, 1337
Hpy99I CGWCG 3 cut(s) 124, 1406, 1604
HpyAV CCTTC 6 cut(s) 80, 1132, 1195, 1211, 1439, 1453
HpyCH4III ACNGT 2 cut(s) 152, 206
HpyCH4IV ACGT 4 cut(s) 300, 858, 1017, 1637
HpyCH4V TGCA 8 cut(s) 282, 306, 727, 797, 838, 842, 1126, 1574
HpyF10VI GCNNNNNNNGC 7 cut(s) 581, 609, 943, 1031, 1205, 1247, 1414
HpyF3I CTNAG 2 cut(s) 464, 933
HpySE526I ACGT 4 cut(s) 300, 858, 1017, 1637
Hsp92I GRCGYC 1 cut(s) 1321
HspAI GCGC 1 cut(s) 1034
KflI GGGWCCC 1 cut(s) 1185
KpnI GGTACC 1 cut(s) 1307
Kzo9I GATC 4 cut(s) 268, 440, 803, 1511
LmnI GCTCC 5 cut(s) 222, 617, 1162, 1205, 1354
Lsp1109I GCAGC 3 cut(s) 226, 229, 916
LweI GCATC 3 cut(s) 269, 1228, 1388
MaeI CTAG 4 cut(s) 257, 266, 326, 1485
MaeII ACGT 4 cut(s) 300, 858, 1017, 1637
MaeIII GTNAC 5 cut(s) 225, 346, 491, 692, 1592
MalI GATC 4 cut(s) 270, 442, 805, 1513
MboI GATC 4 cut(s) 268, 440, 803, 1511
MboII GAAGA 8 cut(s) 70, 80, 434, 532, 631, 1003, 1099, 1325
MfeI CAATTG 1 cut(s) 486
MflI RGATCY 1 cut(s) 268
MhlI GDGCHC 3 cut(s) 150, 605, 1410
MlsI TGGCCA 1 cut(s) 1534
MluCI AATT 9 cut(s) 34, 133, 273, 486, 523, 676, 921, 1037, 1243
MluNI TGGCCA 1 cut(s) 1534
MlyI GAGTC 4 cut(s) 354, 719, 797, 1589
MmeI TCCRAC 5 cut(s) 937, 1024, 1042, 1478, 1640
MnlI CCTC 9 cut(s) 33, 172, 1045, 1058, 1099, 1264, 1336, 1369, 1468
Mox20I TGGCCA 1 cut(s) 1534
Mph1103I ATGCAT 1 cut(s) 844
MscI TGGCCA 1 cut(s) 1534
MseI TTAA 5 cut(s) 210, 434, 527, 924, 1134
MslI CAYNNNNRTG 3 cut(s) 287, 369, 1281
Msp20I TGGCCA 1 cut(s) 1534
MspI CCGG 4 cut(s) 246, 394, 548, 1428
MspR9I CCNGG 4 cut(s) 189, 394, 548, 1520
MunI CAATTG 1 cut(s) 486
MvaI CCWGG 2 cut(s) 189, 1520
MvnI CGCG 1 cut(s) 175
MwoI GCNNNNNNNGC 7 cut(s) 581, 609, 943, 1031, 1205, 1247, 1414
NciI CCSGG 2 cut(s) 394, 548
NdeII GATC 4 cut(s) 268, 440, 803, 1511
NlaIV GGNNCC 6 cut(s) 218, 613, 1074, 1186, 1187, 1305
NmuCI GTSAC 4 cut(s) 225, 346, 491, 1592
NsbI TGCGCA 1 cut(s) 1035
NsiI ATGCAT 1 cut(s) 844
NspI RCATGY 1 cut(s) 842
OliI CACNNNNGTG 1 cut(s) 287
PaeI GCATGC 1 cut(s) 842
PcsI WCGNNNNNNNCGW 1 cut(s) 501
PfeI GAWTC 3 cut(s) 979, 1265, 1454
PflFI GACNNNGTC 2 cut(s) 1145, 1598
PflMI CCANNNNNTGG 1 cut(s) 634
PfoI TCCNGGA 1 cut(s) 392
PkrI GCNGC 3 cut(s) 241, 244, 906
PleI GAGTC 4 cut(s) 353, 718, 796, 1589
PpsI GAGTC 4 cut(s) 353, 718, 796, 1589
PpuMI RGGWCCY 1 cut(s) 1185
PshBI ATTAAT 1 cut(s) 924
Psp5II RGGWCCY 1 cut(s) 1185
Psp6I CCWGG 2 cut(s) 187, 1518
PspGI CCWGG 2 cut(s) 187, 1518
PspN4I GGNNCC 6 cut(s) 218, 613, 1074, 1186, 1187, 1305
PspPI GGNCC 5 cut(s) 20, 316, 1185, 1273, 1416
PspPPI RGGWCCY 1 cut(s) 1185
PsuI RGATCY 1 cut(s) 268
PsyI GACNNNGTC 2 cut(s) 1145, 1598
RsaI GTAC 1 cut(s) 1305
RsaNI GTAC 1 cut(s) 1304
RseI CAYNNNNRTG 3 cut(s) 287, 369, 1281
SalI GTCGAC 2 cut(s) 503, 1601
SaqAI TTAA 5 cut(s) 210, 434, 527, 924, 1134
SatI GCNGC 3 cut(s) 240, 243, 905
Sau3AI GATC 4 cut(s) 268, 440, 803, 1511
Sau96I GGNCC 5 cut(s) 20, 316, 1185, 1273, 1416
SchI GAGTC 4 cut(s) 354, 719, 797, 1589
ScrFI CCNGG 4 cut(s) 189, 394, 548, 1520
SduI GDGCHC 3 cut(s) 150, 605, 1410
SfaNI GCATC 3 cut(s) 269, 1228, 1388
SinI GGWCC 3 cut(s) 20, 316, 1185
SmiMI CAYNNNNRTG 3 cut(s) 287, 369, 1281
SphI GCATGC 1 cut(s) 842
Sse9I AATT 9 cut(s) 34, 133, 273, 486, 523, 676, 921, 1037, 1243
SsiI CCGC 5 cut(s) 220, 974, 1010, 1094, 1628
SspI AATATT 1 cut(s) 1179
SspMI CTAG 4 cut(s) 257, 266, 326, 1485
StyD4I CCNGG 4 cut(s) 187, 392, 546, 1518
TaaI ACNGT 2 cut(s) 152, 206
TaiI ACGT 4 cut(s) 303, 861, 1020, 1640
TaqI TCGA 5 cut(s) 369, 504, 1401, 1457, 1602
TasI AATT 9 cut(s) 34, 133, 273, 486, 523, 676, 921, 1037, 1243
TfiI GAWTC 3 cut(s) 979, 1265, 1454
Tru1I TTAA 5 cut(s) 210, 434, 527, 924, 1134
Tru9I TTAA 5 cut(s) 210, 434, 527, 924, 1134
TseFI GTSAC 4 cut(s) 225, 346, 491, 1592
TseI GCWGC 3 cut(s) 239, 242, 904
Tsp45I GTSAC 4 cut(s) 225, 346, 491, 1592
TspDTI ATGAA 8 cut(s) 99, 878, 888, 927, 1004, 1127, 1299, 1458
TspGWI ACGGA 5 cut(s) 308, 487, 671, 781, 1588
Tth111I GACNNNGTC 2 cut(s) 1145, 1598
Van91I CCANNNNNTGG 1 cut(s) 634
VpaK11BI GGWCC 3 cut(s) 20, 316, 1185
VspI ATTAAT 1 cut(s) 924
XapI RAATTY 3 cut(s) 34, 133, 523
XbaI TCTAGA 2 cut(s) 265, 325
XceI RCATGY 1 cut(s) 842
XmiI GTMKAC 3 cut(s) 504, 816, 1602
XspI CTAG 4 cut(s) 257, 266, 326, 1485
Zsp2I ATGCAT 1 cut(s) 844
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.