Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0002409

Physical Location & Seq

Genomic Coordinates Forward (+)

37650508 .. 37655762

Gene Structure 5255 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG299800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGGTTTCACAAGAAGAGCTTACATCAGGACGCATCATTCAAAAGGAAAAGAAAAAGGGTATGTTTAGTTCTGTTCTTAAAGATATTGTGGGAAGTAAAGGGAAGAATGTCCCTGAGATGGAAAATGAAGATACTAAAGAAAGTATTGAAGAACTTTCAACAATCTTTTCGACTGCTAATTTCCAATTTGATGCTGAGAACACGGACAACCAGGCCATGGGTGTAGATGATCAGTTAGATATAGATTCTATGTCAACGGGCGACGCCATTAATCTAGTGAAGAAGAACGAAATACAAGATGAAGAAGTGTGTACGTTTATGTTAACGCCAACGCAATTCATTGAAACCACTCAGGGTCTGACAATGGACCAAGCAAATGTCGTCTCCAGTATCGGCTTCGGGGAGTTACATCACCTGGGATGCAGCACAATATTTGACACGGTATGTGAGATGATGCTTAATAGCATTGATCCTCTAAATGAGATTGTGTTGATACATGGCAAGGAAATACCCTTTGGACCCGCAGATTTTGCACGTGTCATGGGCATAAAGGATGGTGGATTAGACATTCAGAACATGGGAGATACGAACGAAAGTCTTGTTAGATGGGTTGACAAAGGAATCACTCCAATCGCTGCATGGAACACTACTTTAGTGAAGAAATTGATTAGGTGGGTGGAACAAAATGGGGGAGTCACCAACACAAACCAGAATGTTTGGAGGAGACAACCTATAATCCATGAGAAGGAGTCTGATGCAAATGGGAAAATATATGATGCAAAACAAATATTGTTGAGTGTAGAAGGCCTGCATAAAAGGGTTTCTAATATGGAACAAAAAGAAAGTCGGCTGACAGAATCAATGGAGAGAATGGAGAGGATGCTAGGCTCATTCCAAGGGGCAACAATTAAACATATTGTTGGAGAGGTGTTGGCTCCTTTAGAACAGCGAGATGAAGGCAAGCATGGGGAGTGCCAAGATCAATTTAAGTTCAGAGCGGACCTTAATGTGCATGAATTCAGAGGCTCAGAGGCACAGTCTAATGATCCATCAAGGCTATTGAAGGGCAAAAATATTTGCATGAACCCCCTGCCAGACGAGGTTTGCATGGGTAGAAAGATGAATCCCCCGCTCAAAGTCCAATCAAAATGTTCATTTAGCCCAGATGGTCCTCCGAAGCCGGCTAAGCGATCAATAAAGGAAAAGAAACTAAGGGGTGTCGGGGTGCAGTCAATGCATATACGGAAGGCTCTTTTCAAAACACGAGGAAGAACATATGGCAAGCAAACAAGAGTGGAACTGAAGGATGATGAAAAACAAGAGGAACAAGGTCTTCGTTGCCTATTCAACGTCAAAGCAAATACTCCAAAGGAGGACATCGAGTTGTTGACTTTCATTGGGTTTAGTAAGAAGCCACTTACAAATCTTCAAATGAGATATTACAATGTCACAGTAGCTAAACATGGGGGAGTGATTGTATCAAGAGCCGACATGCAATGCCTACTGCTTGGTCAACTTTTGAGCGACTATGCAAGCTCTAATGTGAAAAATATTCAGATGACCAGAATGGAATGGATTGAACACACCTGTCGCGTTAGCATGTTGGATAGATTCAAGGGGAAATTCAGGATGTGCAGAAGGATATACATTCCTTTGCGCGATCCTGCATCTGAGGGGCATTGGTATTTGTTGGTGGTGCACAAAGACTCCAGATTTGGGGAAATCGTTGACAGTGCACCTGATGATGATAGGACTTCATTCCGTGAGGAAGTTGCAAGAATGGCGATGAAGATGCTAGACAGTGTTTTTGGTGATGATATTAGGGAGGAAATGGGAGTGCTACCTCATTTTACTGATCTTCCATTCATGGATAAGCACAACCACCCGGTTCAAAGAAACTCGTTCGACTGTGGTGTGTTTGTAATAAGAAACATGCAGCATTATGGCACACAATGGAATGAGGATTATGTTTCAGATGAGCACCGCGCAAATTTGGTCCTTGAGTGTGTCAATCACCCTCGCAATAAGGTGGAAAATGTAAGAGAAATGGTGGCAGATTGTTTGTCGCAACGAGGGGGGGATGTGGTAGATGGAAACAAGCATGAATTTTGTAATCTGTGTTCAAGTTGCACATCTGACCTGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000149 GO:0002791 GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0008047 GO:0008150 GO:0012505 GO:0016020 GO:0017016 GO:0017075 GO:0017137 GO:0017157 GO:0019899 GO:0019905 GO:0030141 GO:0030234 GO:0030695 GO:0031267 GO:0031410 GO:0031982 GO:0032879 GO:0032880 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043229 GO:0043547 GO:0044093 GO:0044424 GO:0044444 GO:0044464 GO:0045921 GO:0048518 GO:0048522 GO:0050708 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051046 GO:0051047 GO:0051049 GO:0051050 GO:0051223 GO:0051336 GO:0051345 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070201 GO:0071944 GO:0090087 GO:0097708 GO:0098772 GO:0099503 GO:1903530 GO:1903532

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lgl_C

Protein Analysis

715

Amino Acids

81.22

Weight (kDa)

5.93

Isoelectric Point (pI)

40.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_C48	PF02902	541 - 655	1.7e-09	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002409)

Species	Orthologous Gene IDs
rosa_laevigata	RLG00000002091 RLG00000004454 RLG00000033140 RLG00000033141 RLG00000033142
rosa_multiflora	Rmu_sc0000077.1_g000043 Rmu_sc0000361.1_g000004 Rmu_sc0002048.1_g000017 Rmu_sc0007180.1_g000005 Rmu_sc0007223.1_g000007 Rmu_sc0008769.1_g000009
rosa_roxburghii	Rroxscaffold_2G00118160 Rroxscaffold_2G00118170 Rroxscaffold_2G00125280 Rroxscaffold_3G00237010 Rroxscaffold_5G00349960 Rroxscaffold_5G00349970 Rroxscaffold_5G00362900 Rroxscaffold_7G00197790 Rroxscaffold_7G00197870
rosa_rugosa	Rorug07G0208000
rosa_samantha	Rh1BG098800 Rh1CG156600 Rh2DG571500 Rh4AG336300 Rh4BG133300 Rh4BG219500 Rh4DG120500 Rh4DG338800 Rh5DG299800 Rh6AG195900 Rh6BG101300 Rh6BG101400 Rh6BG101500 Rh6CG173400 Rh6CG200800 Rh7AG275000 Rh7DG346800
rosa_wichuraiana	Rw4G010230 Rw5G035120 Rw6G007570 Rw6G041520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	217
AccBSI	CCGCTC	2 cut(s)	998, 1132
AccII	CGCG	3 cut(s)	1593, 1659, 1986
AciI	CCGC	4 cut(s)	522, 998, 1130, 1984
AclWI	GGATC	3 cut(s)	464, 1040, 1655
AcsI	RAATTY	4 cut(s)	1016, 1622, 1990, 2105
AcuI	CTGAAG	1 cut(s)	1322
AcvI	CACGTG	1 cut(s)	536
AcyI	GRCGYC	1 cut(s)	264
AfaI	GTAC	1 cut(s)	313
AfiI	CCNNNNNNNGG	4 cut(s)	118, 217, 745, 1716
AflIII	ACRYGT	1 cut(s)	535
AjnI	CCWGG	2 cut(s)	210, 414
AjuI	GAANNNNNNNTTGG	2 cut(s)	498, 530
AluBI	AGCT	3 cut(s)	19, 1457, 1536
AluI	AGCT	3 cut(s)	19, 1457, 1536
Alw21I	GWGCWC	3 cut(s)	1701, 1738, 1983
Alw26I	GTCTC	2 cut(s)	388, 718
Alw44I	GTGCAC	2 cut(s)	1697, 1734
AlwI	GGATC	3 cut(s)	464, 1040, 1655
AlwNI	CAGNNNCTG	1 cut(s)	358
AoxI	GGCC	2 cut(s)	213, 805
ApaLI	GTGCAC	2 cut(s)	1697, 1734
ApeKI	GCWGC	3 cut(s)	423, 635, 1936
ApoI	RAATTY	4 cut(s)	1016, 1622, 1990, 2105
ArsI	GACNNNNNNTTYG	6 cut(s)	829, 861, 1697, 1729, 1790, 1822
AseI	ATTAAT	1 cut(s)	270
AspLEI	GCGC	2 cut(s)	1659, 1988
AspS9I	GGNCC	5 cut(s)	367, 518, 1000, 1169, 1996
AsuC2I	CCSGG	1 cut(s)	1886
AsuHPI	GGTGA	4 cut(s)	404, 688, 1823, 2006
AvaII	GGWCC	5 cut(s)	367, 518, 1000, 1169, 1996
BaeGI	GKGCMC	2 cut(s)	1701, 1738
BauI	CACGAG	1 cut(s)	1263
BbrPI	CACGTG	1 cut(s)	536
BbsI	GAAGAC	1 cut(s)	1325
Bbv12I	GWGCWC	3 cut(s)	1701, 1738, 1983
BbvI	GCAGC	3 cut(s)	435, 622, 1948
BccI	CCATC	6 cut(s)	112, 548, 600, 1057, 1160, 2084
BcgI	CGANNNNNNTGC	2 cut(s)	1774, 1808
BciT130I	CCWGG	2 cut(s)	212, 416
BclI	TGATCA	1 cut(s)	229
BcnI	CCSGG	1 cut(s)	1886
BcoDI	GTCTC	2 cut(s)	388, 718
BfaI	CTAG	3 cut(s)	275, 884, 1796
BfmI	CTRYAG	1 cut(s)	2141
BisI	GCNGC	3 cut(s)	424, 636, 1937
BlpI	GCTNAGC	1 cut(s)	1185
BlsI	GCNGC	3 cut(s)	425, 637, 1938
Bme1390I	CCNGG	3 cut(s)	212, 416, 1886
Bme18I	GGWCC	5 cut(s)	367, 518, 1000, 1169, 1996
BmgT120I	GGNCC	5 cut(s)	367, 518, 1000, 1169, 1996
BmiI	GGNNCC	2 cut(s)	520, 936
BmrFI	CCNGG	3 cut(s)	212, 416, 1886
BmsI	GCATC	9 cut(s)	42, 181, 410, 444, 745, 766, 870, 1676, 1782
BpiI	GAAGAC	1 cut(s)	1325
BpmI	CTGGAG	2 cut(s)	370, 1693
Bpu1102I	GCTNAGC	1 cut(s)	1185
BpuEI	CTTGAG	1 cut(s)	2021
BpuMI	CCSGG	1 cut(s)	1886
BsaAI	YACGTR	1 cut(s)	536
BsaHI	GRCGYC	1 cut(s)	264
BsaJI	CCNNGG	3 cut(s)	216, 415, 895
BsaXI	ACNNNNNCTCC	4 cut(s)	1461, 1491, 1691, 1721
Bsc4I	CCNNNNNNNGG	4 cut(s)	118, 217, 745, 1716
Bse118I	RCCGGY	1 cut(s)	1180
Bse1I	ACTGG	1 cut(s)	387
Bse3DI	GCAATG	1 cut(s)	1502
BseBI	CCWGG	2 cut(s)	212, 416
BseDI	CCNNGG	3 cut(s)	216, 415, 895
BseGI	GGATG	6 cut(s)	425, 559, 885, 1312, 1635, 2086
BseLI	CCNNNNNNNGG	4 cut(s)	118, 217, 745, 1716
BseMI	GCAATG	1 cut(s)	1502
BseMII	CTCAG	5 cut(s)	105, 186, 365, 1041, 1662
BseNI	ACTGG	1 cut(s)	387
BseRI	GAGGAG	1 cut(s)	736
BseSI	GKGCMC	2 cut(s)	1701, 1738
BseXI	GCAGC	3 cut(s)	435, 622, 1948
BsgI	GTGCAG	2 cut(s)	1247, 1654
Bsh1236I	CGCG	3 cut(s)	1593, 1659, 1986
BshFI	GGCC	2 cut(s)	215, 807
BsiHKAI	GWGCWC	3 cut(s)	1701, 1738, 1983
BsiSI	CCGG	2 cut(s)	1181, 1886
BslFI	GGGAC	1 cut(s)	95
BslI	CCNNNNNNNGG	4 cut(s)	118, 217, 745, 1716
BsmAI	GTCTC	2 cut(s)	388, 718
BsmBI	CGTCTC	1 cut(s)	388
BsmFI	GGGAC	1 cut(s)	95
BsnI	GGCC	2 cut(s)	215, 807
Bsp1286I	GDGCHC	3 cut(s)	1701, 1738, 1983
Bsp143I	GATC	7 cut(s)	229, 469, 979, 1045, 1190, 1660, 1855
Bsp1720I	GCTNAGC	1 cut(s)	1185
Bsp19I	CCATGG	1 cut(s)	216
BspACI	CCGC	4 cut(s)	522, 998, 1130, 1984
BspANI	GGCC	2 cut(s)	215, 807
BspCNI	CTCAG	5 cut(s)	106, 187, 364, 1040, 1663
BspFNI	CGCG	3 cut(s)	1593, 1659, 1986
BspLI	GGNNCC	2 cut(s)	520, 936
BspMAI	CTGCAG	1 cut(s)	2145
BspPI	GGATC	3 cut(s)	464, 1040, 1655
BspQI	GCTCTTC	1 cut(s)	9
BsrBI	CCGCTC	2 cut(s)	998, 1132
BsrDI	GCAATG	1 cut(s)	1502
BsrFI	RCCGGY	1 cut(s)	1180
BsrI	ACTGG	1 cut(s)	387
BssAI	RCCGGY	1 cut(s)	1180
BssECI	CCNNGG	3 cut(s)	216, 415, 895
BssMI	GATC	7 cut(s)	229, 469, 979, 1045, 1190, 1660, 1855
BssNI	GRCGYC	1 cut(s)	264
BssSI	CACGAG	1 cut(s)	1263
BssT1I	CCWWGG	2 cut(s)	216, 895
Bst2BI	CACGAG	1 cut(s)	1263
Bst2UI	CCWGG	2 cut(s)	212, 416
Bst4CI	ACNGT	6 cut(s)	442, 1038, 1453, 1733, 1802, 1910
Bst6I	CTCTTC	1 cut(s)	9
BstACI	GRCGYC	1 cut(s)	264
BstAPI	GCANNNNNTGC	2 cut(s)	530, 1234
BstBAI	YACGTR	1 cut(s)	536
BstC8I	GCNNGC	5 cut(s)	809, 962, 1182, 1283, 1534
BstDEI	CTNAG	7 cut(s)	114, 195, 351, 1027, 1185, 1211, 1671
BstDSI	CCRYGG	1 cut(s)	216
BstF5I	GGATG	6 cut(s)	425, 559, 885, 1312, 1635, 2086
BstFNI	CGCG	3 cut(s)	1593, 1659, 1986
BstHHI	GCGC	2 cut(s)	1659, 1988
BstKTI	GATC	7 cut(s)	232, 472, 982, 1048, 1193, 1663, 1858
BstMAI	GTCTC	2 cut(s)	388, 718
BstMBI	GATC	7 cut(s)	229, 469, 979, 1045, 1190, 1660, 1855
BstMWI	GCNNNNNNNGC	4 cut(s)	530, 1186, 1234, 1781
BstNI	CCWGG	2 cut(s)	212, 416
BstNSI	RCATGY	3 cut(s)	1495, 1603, 1936
BstSCI	CCNGG	3 cut(s)	210, 414, 1884
BstSFI	CTRYAG	1 cut(s)	2141
BstSLI	GKGCMC	2 cut(s)	1701, 1738
BstUI	CGCG	3 cut(s)	1593, 1659, 1986
BstV1I	GCAGC	3 cut(s)	435, 622, 1948
BstV2I	GAAGAC	1 cut(s)	1325
BsuRI	GGCC	2 cut(s)	215, 807
BtgI	CCRYGG	1 cut(s)	216
BtgZI	GCGATG	1 cut(s)	1799
BtsCI	GGATG	6 cut(s)	425, 559, 885, 1312, 1635, 2086
BtsIMutI	CAGTG	2 cut(s)	1738, 1807
Cac8I	GCNNGC	5 cut(s)	809, 962, 1182, 1283, 1534
CaiI	CAGNNNCTG	1 cut(s)	358
CfoI	GCGC	2 cut(s)	1659, 1988
Cfr10I	RCCGGY	1 cut(s)	1180
Cfr13I	GGNCC	5 cut(s)	367, 518, 1000, 1169, 1996
CseI	GACGC	2 cut(s)	39, 272
Csp6I	GTAC	1 cut(s)	312
CviQI	GTAC	1 cut(s)	312
DdeI	CTNAG	7 cut(s)	114, 195, 351, 1027, 1185, 1211, 1671
DpnI	GATC	7 cut(s)	231, 471, 981, 1047, 1192, 1662, 1857
DpnII	GATC	7 cut(s)	229, 469, 979, 1045, 1190, 1660, 1855
Eam1104I	CTCTTC	1 cut(s)	9
EarI	CTCTTC	1 cut(s)	9
Eco130I	CCWWGG	2 cut(s)	216, 895
Eco147I	AGGCCT	1 cut(s)	807
Eco47I	GGWCC	5 cut(s)	367, 518, 1000, 1169, 1996
Eco57I	CTGAAG	1 cut(s)	1322
Eco72I	CACGTG	1 cut(s)	536
EcoRI	GAATTC	1 cut(s)	1016
EcoRII	CCWGG	2 cut(s)	210, 414
EcoT14I	CCWWGG	2 cut(s)	216, 895
EcoT22I	ATGCAT	1 cut(s)	1239
ErhI	CCWWGG	2 cut(s)	216, 895
Esp3I	CGTCTC	1 cut(s)	388
FalI	AAGNNNNNCTT	1 cut(s)	35
FaqI	GGGAC	1 cut(s)	95
FauI	CCCGC	2 cut(s)	529, 1137
FauNDI	CATATG	1 cut(s)	1276
FbaI	TGATCA	1 cut(s)	229
Fnu4HI	GCNGC	3 cut(s)	424, 636, 1937
FokI	GGATG	6 cut(s)	432, 566, 892, 1319, 1642, 2093
Fsp4HI	GCNGC	3 cut(s)	424, 636, 1937
FspBI	CTAG	3 cut(s)	275, 884, 1796
GlaI	GCGC	2 cut(s)	1658, 1987
GluI	GCNGC	3 cut(s)	424, 636, 1937
GsuI	CTGGAG	2 cut(s)	370, 1693
HaeIII	GGCC	2 cut(s)	215, 807
HapII	CCGG	2 cut(s)	1181, 1886
HgaI	GACGC	2 cut(s)	39, 272
HhaI	GCGC	2 cut(s)	1659, 1988
Hin1I	GRCGYC	1 cut(s)	264
Hin6I	GCGC	2 cut(s)	1657, 1986
HinP1I	GCGC	2 cut(s)	1657, 1986
HincII	GTYRAC	6 cut(s)	255, 324, 613, 1389, 1514, 1729
HindII	GTYRAC	6 cut(s)	255, 324, 613, 1389, 1514, 1729
HinfI	GANTC	8 cut(s)	245, 621, 693, 749, 857, 1123, 1611, 1706
HpaI	GTTAAC	1 cut(s)	324
HpaII	CCGG	2 cut(s)	1181, 1886
HphI	GGTGA	4 cut(s)	404, 688, 1823, 2006
Hpy166II	GTNNAC	9 cut(s)	255, 312, 324, 613, 1389, 1514, 1699, 1729, 1736
Hpy188III	TCNNGA	4 cut(s)	27, 1482, 1627, 1710
Hpy8I	GTNNAC	9 cut(s)	255, 312, 324, 613, 1389, 1514, 1699, 1729, 1736
Hpy99I	CGWCG	1 cut(s)	266
HpyAV	CCTTC	7 cut(s)	739, 797, 950, 1057, 1240, 1297, 1632
HpyCH4III	ACNGT	6 cut(s)	442, 1038, 1453, 1733, 1802, 1910
HpyCH4IV	ACGT	3 cut(s)	314, 535, 1350
HpyF10VI	GCNNNNNNNGC	4 cut(s)	530, 1186, 1234, 1781
HpyF3I	CTNAG	7 cut(s)	114, 195, 351, 1027, 1185, 1211, 1671
HpySE526I	ACGT	3 cut(s)	314, 535, 1350
Hsp92I	GRCGYC	1 cut(s)	264
HspAI	GCGC	2 cut(s)	1657, 1986
KroI	GCCGGC	1 cut(s)	1180
KroNI	GCCGGC	1 cut(s)	1182
Ksp22I	TGATCA	1 cut(s)	229
KspAI	GTTAAC	1 cut(s)	324
Kzo9I	GATC	7 cut(s)	229, 469, 979, 1045, 1190, 1660, 1855
LguI	GCTCTTC	1 cut(s)	9
LmnI	GCTCC	1 cut(s)	940
Lsp1109I	GCAGC	3 cut(s)	435, 622, 1948
LweI	GCATC	9 cut(s)	42, 181, 410, 444, 745, 766, 870, 1676, 1782
MaeI	CTAG	3 cut(s)	275, 884, 1796
MaeII	ACGT	3 cut(s)	314, 535, 1350
MaeIII	GTNAC	3 cut(s)	405, 694, 1447
MalI	GATC	7 cut(s)	231, 471, 981, 1047, 1192, 1662, 1857
MbiI	CCGCTC	2 cut(s)	998, 1132
MboI	GATC	7 cut(s)	229, 469, 979, 1045, 1190, 1660, 1855
MhlI	GDGCHC	3 cut(s)	1701, 1738, 1983
MlyI	GAGTC	3 cut(s)	702, 758, 1700
MmeI	TCCRAC	2 cut(s)	901, 1584
Mph1103I	ATGCAT	1 cut(s)	1239
MroNI	GCCGGC	1 cut(s)	1180
MseI	TTAA	7 cut(s)	78, 270, 323, 459, 909, 987, 1005
MspI	CCGG	2 cut(s)	1181, 1886
MspR9I	CCNGG	3 cut(s)	212, 416, 1886
MvaI	CCWGG	2 cut(s)	212, 416
MvnI	CGCG	3 cut(s)	1593, 1659, 1986
MwoI	GCNNNNNNNGC	4 cut(s)	530, 1186, 1234, 1781
NaeI	GCCGGC	1 cut(s)	1182
NciI	CCSGG	1 cut(s)	1886
NcoI	CCATGG	1 cut(s)	216
NdeI	CATATG	1 cut(s)	1276
NdeII	GATC	7 cut(s)	229, 469, 979, 1045, 1190, 1660, 1855
NgoMIV	GCCGGC	1 cut(s)	1180
NlaIV	GGNNCC	2 cut(s)	520, 936
NmuCI	GTSAC	2 cut(s)	694, 1447
NsiI	ATGCAT	1 cut(s)	1239
NspI	RCATGY	3 cut(s)	1495, 1603, 1936
PceI	AGGCCT	1 cut(s)	807
PciSI	GCTCTTC	1 cut(s)	9
PdiI	GCCGGC	1 cut(s)	1182
PfeI	GAWTC	5 cut(s)	245, 621, 857, 1123, 1611
PflMI	CCANNNNNTGG	1 cut(s)	217
PkrI	GCNGC	3 cut(s)	425, 637, 1938
PleI	GAGTC	3 cut(s)	701, 757, 1700
PmaCI	CACGTG	1 cut(s)	536
PmlI	CACGTG	1 cut(s)	536
PpsI	GAGTC	3 cut(s)	701, 757, 1700
Ppu21I	YACGTR	1 cut(s)	536
PshBI	ATTAAT	1 cut(s)	270
Psp6I	CCWGG	2 cut(s)	210, 414
PspCI	CACGTG	1 cut(s)	536
PspGI	CCWGG	2 cut(s)	210, 414
PspN4I	GGNNCC	2 cut(s)	520, 936
PspPI	GGNCC	5 cut(s)	367, 518, 1000, 1169, 1996
PsrI	GAACNNNNNNTAC	4 cut(s)	52, 84, 2104, 2136
PstI	CTGCAG	1 cut(s)	2145
PstNI	CAGNNNCTG	1 cut(s)	358
RsaI	GTAC	1 cut(s)	313
RsaNI	GTAC	1 cut(s)	312
SapI	GCTCTTC	1 cut(s)	9
SaqAI	TTAA	7 cut(s)	78, 270, 323, 459, 909, 987, 1005
SatI	GCNGC	3 cut(s)	424, 636, 1937
Sau3AI	GATC	7 cut(s)	229, 469, 979, 1045, 1190, 1660, 1855
Sau96I	GGNCC	5 cut(s)	367, 518, 1000, 1169, 1996
SchI	GAGTC	3 cut(s)	702, 758, 1700
ScrFI	CCNGG	3 cut(s)	212, 416, 1886
SduI	GDGCHC	3 cut(s)	1701, 1738, 1983
SfaNI	GCATC	9 cut(s)	42, 181, 410, 444, 745, 766, 870, 1676, 1782
SfcI	CTRYAG	1 cut(s)	2141
SinI	GGWCC	5 cut(s)	367, 518, 1000, 1169, 1996
SmlI	CTYRAG	1 cut(s)	2000
SmoI	CTYRAG	1 cut(s)	2000
SseBI	AGGCCT	1 cut(s)	807
SsiI	CCGC	4 cut(s)	522, 998, 1130, 1984
SspI	AATATT	4 cut(s)	432, 789, 1075, 1552
SspMI	CTAG	3 cut(s)	275, 884, 1796
StuI	AGGCCT	1 cut(s)	807
StyD4I	CCNGG	3 cut(s)	210, 414, 1884
StyI	CCWWGG	2 cut(s)	216, 895
TaaI	ACNGT	6 cut(s)	442, 1038, 1453, 1733, 1802, 1910
TaiI	ACGT	3 cut(s)	317, 538, 1353
TaqI	TCGA	3 cut(s)	170, 1380, 1905
TfiI	GAWTC	5 cut(s)	245, 621, 857, 1123, 1611
Tru1I	TTAA	7 cut(s)	78, 270, 323, 459, 909, 987, 1005
Tru9I	TTAA	7 cut(s)	78, 270, 323, 459, 909, 987, 1005
TscAI	CASTG	2 cut(s)	1738, 1807
TseFI	GTSAC	2 cut(s)	694, 1447
TseI	GCWGC	3 cut(s)	423, 635, 1936
Tsp45I	GTSAC	2 cut(s)	694, 1447
TspGWI	ACGGA	3 cut(s)	218, 1258, 1751
TspRI	CASTG	2 cut(s)	1738, 1807
Van91I	CCANNNNNTGG	1 cut(s)	217
VneI	GTGCAC	2 cut(s)	1697, 1734
VpaK11BI	GGWCC	5 cut(s)	367, 518, 1000, 1169, 1996
VspI	ATTAAT	1 cut(s)	270
XapI	RAATTY	4 cut(s)	1016, 1622, 1990, 2105
XceI	RCATGY	3 cut(s)	1495, 1603, 1936
XcmI	CCANNNNNNNNNTGG	1 cut(s)	636
XspI	CTAG	3 cut(s)	275, 884, 1796
Zsp2I	ATGCAT	1 cut(s)	1239

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.