Rmu_sc0001653.1_g000008

Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001653.1
Physical Location & Seq
Reverse (-)
33341 .. 37661
4321 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001653.1_g000008.1.cds

Sequence Viewer

Length: 1044 bp
atggacacagtcaccgagtcccacatggcagtctccatggccgccctcgacggcatcgtcatcctccactccaacgccgcctcctccgaccaggccgccatggtcaaatccgtcaaggcccgccgcgtccccctcctctccgcccccgtcttcatgtcccgcggagaccgcatccacaacgacgacgttttcgaccacggccccaatccctacgtcctcgtcaccgagtccggcgcccccagctccaagcttttgggctacatggcgagccgcgattgggtgaagctggcgaacaaggaggtcaagatttacgattacatggttagctgtaaggacatggttttgccttggagctccgatttggggaagattgaggagttcatggcggataaagggcgggacgtggcggcgacggtgagggacgacgaggttgtcgacgttgtggggaaggaggacgtggagtccatcaatgaggtagacctcagattctttcatttcaccgacgccgcgcattcatcttggctgctcatcatctcatttgctgttcaacgaaggtatgctagcttctttatcatcgatctttgtcatctcagtaccatcaagattgcaatactgctcatagcaaaagtttttacagtacgttctttgggtcttcttatggcttcactggcacatggaaggaagctcttgaatggggctgccaacgtgtcccgtcaatacttggatctgctacgggttggacaatcgtattggctcgtacgctcatattggaatcaaaaaatttcagaagatgaaagctacatgccacgtcgccacccgcacgcccctacactacaaaaagctggctggcatgcgcctgctgtcttgtcagtgctacaagacaagcgactgggagccacttcttcacacggcgcgtctccctctcctcttctttttgggccagcgtggagccctgggtcacgagctcagtcaccatcgtacctgagctgctgtcctgggtcttctattgtgttgttgccccaactccggtggaagatggaatag

Protein Analysis

347

Amino Acids

38.44

Weight (kDa)

8.27

Isoelectric Point (pI)

59.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000729)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16350 AT1G79470
fragaria_vesca FvH4_3g14430 FvH4_3g14430
malus_domestica MD05G1237000.v1.1 MD05G1237500.v1.1 MD10G1213800.v1.1
prunus_persica Prupe.4G129200_v2.0.a1 Prupe.4G129200_v2.0.a1
pyrus_communis pycom05g21380 pycom10g18050 pycom10g18080 pycom10g18140 pycom10g18190
rosa_chinensis RchiOBHm_Chr1g0350061 RchiOBHm_Chr2g0101951 RchiOBHm_Chr2g0155871 RchiOBHm_Chr3g0468611 RchiOBHm_Chr3g0493461 RchiOBHm_Chr4g0401281 RchiOBHm_Chr4g0402021 RchiOBHm_Chr5g0023561 RchiOBHm_Chr5g0023571 RchiOBHm_Chr5g0023741 RchiOBHm_Chr7g0231801 RchiOBHm_Chr7g0234111 RchiOBHm_Chr7g0238791 RchiOBHm_Chr7g0239601
rosa_laevigata RLG00000032733
rosa_multiflora Rmu_co8005014.1_g000001 Rmu_co8223904.1_g000001 Rmu_sc0000087.1_g000007 Rmu_sc0000110.1_g000028 Rmu_sc0000172.1_g000003 Rmu_sc0000689.1_g000019 Rmu_sc0000870.1_g000014 Rmu_sc0001372.1_g000011 Rmu_sc0001516.1_g000086 Rmu_sc0001653.1_g000008 Rmu_sc0002862.1_g000001 Rmu_sc0002862.1_g000002 Rmu_sc0008652.1_g000002 Rmu_sc0011789.1_g000002 Rmu_sc0013252.1_g000001 Rmu_sc0017256.1_g000001 Rmu_sc0017907.1_g000002 Rmu_sc0017907.1_g000003 Rmu_sc0018737.1_g000003 Rmu_sc0020536.1_g000001 Rmu_sc0025127.1_g000001 Rmu_sc0028608.1_g000001 Rmu_sc0029703.1_g000001 Rmu_ssc0000027.1_g000015
rosa_roxburghii Rroxscaffold_1G00055450
rosa_rugosa Rorug03G0326300 Rorug05G0079400 Rorug05G0352300
rosa_samantha Rh5AG167200 Rh5AG169300 Rh5BG166700 Rh5CG181100 Rh5CG182300 Rh5DG168600 Rh6BG409700
rosa_wichuraiana Rw0G001580 Rw0G004990 Rw1G017410 Rw2G027840 Rw4G002740 Rw5G015190 Rw5G015310 Rw7G033830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 56, 431
AccB1I GGYRCC 1 cut(s) 233
AccI GTMKAC 2 cut(s) 435, 477
AccII CGCG 5 cut(s) 126, 162, 273, 509, 914
AclWI GGATC 1 cut(s) 732
AcoI YGGCCR 1 cut(s) 39
AcsI RAATTY 1 cut(s) 780
AcyI GRCGYC 2 cut(s) 234, 504
AfaI GTAC 4 cut(s) 595, 639, 759, 980
AfiI CCNNNNNNNGG 3 cut(s) 277, 363, 1026
AflIII ACRYGT 1 cut(s) 705
AgsI TTSAA 2 cut(s) 548, 691
AhdI GACNNNNNGTC 1 cut(s) 460
AjiI CACGTC 3 cut(s) 403, 457, 809
AjnI CCWGG 3 cut(s) 90, 952, 994
Alw21I GWGCWC 2 cut(s) 356, 967
Alw26I GTCTC 3 cut(s) 37, 159, 921
AlwI GGATC 1 cut(s) 732
AoxI GGCC 5 cut(s) 39, 93, 117, 199, 938
ApeKI GCWGC 3 cut(s) 523, 698, 987
ApoI RAATTY 1 cut(s) 780
ArsI GACNNNNNNTTYG 2 cut(s) 173, 205
AspLEI GCGC 4 cut(s) 236, 511, 856, 914
AspS9I GGNCC 3 cut(s) 118, 200, 938
AsuHPI GGTGA 6 cut(s) 4, 214, 292, 427, 490, 963
AsuNHI GCTAGC 1 cut(s) 560
BaeI ACNNNNGTAYC 2 cut(s) 962, 995
BanI GGYRCC 1 cut(s) 233
BanII GRGCYC 3 cut(s) 356, 953, 967
BarI GAAGNNNNNNTAC 2 cut(s) 548, 580
BauI CACGAG 1 cut(s) 960
BbsI GAAGAC 3 cut(s) 142, 644, 993
Bbv12I GWGCWC 2 cut(s) 356, 967
BbvI GCAGC 3 cut(s) 510, 685, 974
BccI CCATC 4 cut(s) 473, 605, 982, 1030
BceAI ACGGC 3 cut(s) 67, 214, 925
BciT130I CCWGG 3 cut(s) 92, 954, 996
BcoDI GTCTC 3 cut(s) 37, 159, 921
BfaI CTAG 1 cut(s) 561
BfoI RGCGCY 1 cut(s) 237
Bme1390I CCNGG 3 cut(s) 92, 954, 996
BmeRI GACNNNNNGTC 1 cut(s) 460
BmgBI CACGTC 3 cut(s) 403, 457, 809
BmgT120I GGNCC 3 cut(s) 118, 200, 938
BmiI GGNNCC 4 cut(s) 202, 235, 895, 950
BmrFI CCNGG 3 cut(s) 92, 954, 996
BmrI ACTGGG 1 cut(s) 899
BmsI GCATC 2 cut(s) 63, 180
BmtI GCTAGC 1 cut(s) 564
BmuI ACTGGG 1 cut(s) 899
BpiI GAAGAC 3 cut(s) 142, 644, 993
Bpu10I CCTNAGC 1 cut(s) 983
Bsa29I ATCGAT 1 cut(s) 576
BsaHI GRCGYC 2 cut(s) 234, 504
BsaI GGTCTC 1 cut(s) 159
BsaJI CCNNGG 8 cut(s) 36, 99, 160, 196, 347, 952, 953, 995
BsaWI WCCGGW 1 cut(s) 1026
BsaXI ACNNNNNCTCC 2 cut(s) 65, 95
Bsc4I CCNNNNNNNGG 3 cut(s) 277, 363, 1026
Bse1I ACTGG 2 cut(s) 672, 894
BseBI CCWGG 3 cut(s) 92, 954, 996
BseCI ATCGAT 1 cut(s) 576
BseDI CCNNGG 8 cut(s) 36, 99, 160, 196, 347, 952, 953, 995
BseGI GGATG 2 cut(s) 60, 171
BseLI CCNNNNNNNGG 3 cut(s) 277, 363, 1026
BseMII CTCAG 4 cut(s) 496, 604, 974, 980
BseNI ACTGG 2 cut(s) 672, 894
BseRI GAGGAG 4 cut(s) 73, 125, 389, 915
BseXI GCAGC 3 cut(s) 510, 685, 974
BseYI CCCAGC 1 cut(s) 239
Bsh1236I CGCG 5 cut(s) 126, 162, 273, 509, 914
BshFI GGCC 5 cut(s) 41, 95, 119, 201, 940
BshNI GGYRCC 1 cut(s) 233
BshVI ATCGAT 1 cut(s) 576
BsiHKAI GWGCWC 2 cut(s) 356, 967
BsiSI CCGG 2 cut(s) 231, 1027
BsiWI CGTACG 1 cut(s) 757
BslFI GGGAC 6 cut(s) 4, 113, 142, 413, 434, 694
BslI CCNNNNNNNGG 3 cut(s) 277, 363, 1026
BsmAI GTCTC 3 cut(s) 37, 159, 921
BsmBI CGTCTC 1 cut(s) 921
BsmFI GGGAC 6 cut(s) 4, 113, 142, 413, 434, 694
BsmI GAATGC 1 cut(s) 511
BsnI GGCC 5 cut(s) 41, 95, 119, 201, 940
Bso31I GGTCTC 1 cut(s) 159
Bsp1286I GDGCHC 3 cut(s) 356, 953, 967
Bsp143I GATC 2 cut(s) 577, 724
Bsp19I CCATGG 2 cut(s) 36, 99
BspANI GGCC 5 cut(s) 41, 95, 119, 201, 940
BspCNI CTCAG 4 cut(s) 495, 603, 975, 979
BspDI ATCGAT 1 cut(s) 576
BspFNI CGCG 5 cut(s) 126, 162, 273, 509, 914
BspLI GGNNCC 4 cut(s) 202, 235, 895, 950
BspOI GCTAGC 1 cut(s) 564
BspPI GGATC 1 cut(s) 732
BspT107I GGYRCC 1 cut(s) 233
BspTNI GGTCTC 1 cut(s) 159
BsrI ACTGG 2 cut(s) 672, 894
BssECI CCNNGG 8 cut(s) 36, 99, 160, 196, 347, 952, 953, 995
BssMI GATC 2 cut(s) 577, 724
BssNI GRCGYC 2 cut(s) 234, 504
BssSI CACGAG 1 cut(s) 960
BssT1I CCWWGG 3 cut(s) 36, 99, 347
Bst2BI CACGAG 1 cut(s) 960
Bst2UI CCWGG 3 cut(s) 92, 954, 996
Bst4CI ACNGT 3 cut(s) 10, 415, 637
Bst6I CTCTTC 1 cut(s) 933
BstACI GRCGYC 2 cut(s) 234, 504
BstDEI CTNAG 4 cut(s) 482, 590, 966, 983
BstDSI CCRYGG 4 cut(s) 36, 99, 160, 196
BstF5I GGATG 2 cut(s) 60, 171
BstFNI CGCG 5 cut(s) 126, 162, 273, 509, 914
BstH2I RGCGCY 1 cut(s) 237
BstHHI GCGC 4 cut(s) 236, 511, 856, 914
BstKTI GATC 2 cut(s) 580, 727
BstMAI GTCTC 3 cut(s) 37, 159, 921
BstMBI GATC 2 cut(s) 577, 724
BstMWI GCNNNNNNNGC 3 cut(s) 168, 240, 668
BstNI CCWGG 3 cut(s) 92, 954, 996
BstNSI RCATGY 2 cut(s) 805, 854
BstSCI CCNGG 3 cut(s) 90, 952, 994
BstUI CGCG 5 cut(s) 126, 162, 273, 509, 914
BstV1I GCAGC 3 cut(s) 510, 685, 974
BstV2I GAAGAC 3 cut(s) 142, 644, 993
BstX2I RGATCY 1 cut(s) 724
BstXI CCANNNNNNTGG 1 cut(s) 253
BstYI RGATCY 1 cut(s) 724
Bsu15I ATCGAT 1 cut(s) 576
BsuRI GGCC 5 cut(s) 41, 95, 119, 201, 940
BsuTUI ATCGAT 1 cut(s) 576
BtgI CCRYGG 4 cut(s) 36, 99, 160, 196
BtrI CACGTC 3 cut(s) 403, 457, 809
BtsCI GGATG 2 cut(s) 60, 171
BtsIMutI CAGTG 2 cut(s) 665, 876
CfoI GCGC 4 cut(s) 236, 511, 856, 914
Cfr13I GGNCC 3 cut(s) 118, 200, 938
Cfr42I CCGCGG 1 cut(s) 163
ClaI ATCGAT 1 cut(s) 576
CseI GACGC 3 cut(s) 115, 512, 903
Csp6I GTAC 4 cut(s) 594, 638, 758, 979
CspCI CAANNNNNGTGG 1 cut(s) 1010
CviQI GTAC 4 cut(s) 594, 638, 758, 979
DdeI CTNAG 4 cut(s) 482, 590, 966, 983
DinI GGCGCC 1 cut(s) 235
DpnI GATC 2 cut(s) 579, 726
DpnII GATC 2 cut(s) 577, 724
DrdI GACNNNNNNGTC 2 cut(s) 56, 431
DriI GACNNNNNGTC 1 cut(s) 460
DseDI GACNNNNNNGTC 2 cut(s) 56, 431
EaeI YGGCCR 1 cut(s) 39
Eam1104I CTCTTC 1 cut(s) 933
Eam1105I GACNNNNNGTC 1 cut(s) 460
EarI CTCTTC 1 cut(s) 933
EciI GGCGGA 2 cut(s) 130, 401
Ecl136II GAGCTC 2 cut(s) 354, 965
Eco130I CCWWGG 3 cut(s) 36, 99, 347
Eco24I GRGCYC 3 cut(s) 356, 953, 967
Eco31I GGTCTC 1 cut(s) 159
Eco53kI GAGCTC 2 cut(s) 354, 965
EcoICRI GAGCTC 2 cut(s) 354, 965
EcoRII CCWGG 3 cut(s) 90, 952, 994
EcoT14I CCWWGG 3 cut(s) 36, 99, 347
EcoT38I GRGCYC 3 cut(s) 356, 953, 967
EgeI GGCGCC 1 cut(s) 235
EheI GGCGCC 1 cut(s) 235
ErhI CCWWGG 3 cut(s) 36, 99, 347
Esp3I CGTCTC 1 cut(s) 921
FaqI GGGAC 6 cut(s) 4, 113, 142, 413, 434, 694
FauI CCCGC 4 cut(s) 128, 167, 390, 825
FblI GTMKAC 2 cut(s) 435, 477
FokI GGATG 2 cut(s) 47, 158
FriOI GRGCYC 3 cut(s) 356, 953, 967
FspBI CTAG 1 cut(s) 561
GlaI GCGC 4 cut(s) 235, 510, 855, 913
GsaI CCCAGC 1 cut(s) 243
HaeII RGCGCY 1 cut(s) 237
HaeIII GGCC 5 cut(s) 41, 95, 119, 201, 940
HapII CCGG 2 cut(s) 231, 1027
HgaI GACGC 3 cut(s) 115, 512, 903
HhaI GCGC 4 cut(s) 236, 511, 856, 914
Hin1I GRCGYC 2 cut(s) 234, 504
Hin6I GCGC 4 cut(s) 234, 509, 854, 912
HinP1I GCGC 4 cut(s) 234, 509, 854, 912
HincII GTYRAC 1 cut(s) 436
HindII GTYRAC 1 cut(s) 436
HindIII AAGCTT 1 cut(s) 248
HinfI GANTC 5 cut(s) 17, 227, 461, 486, 772
HpaII CCGG 2 cut(s) 231, 1027
HphI GGTGA 6 cut(s) 4, 214, 292, 427, 490, 963
Hpy166II GTNNAC 2 cut(s) 436, 478
Hpy188I TCNGA 4 cut(s) 88, 358, 485, 787
Hpy188III TCNNGA 4 cut(s) 304, 601, 688, 960
Hpy8I GTNNAC 2 cut(s) 436, 478
Hpy99I CGWCG 8 cut(s) 53, 185, 188, 415, 428, 440, 506, 813
HpyAV CCTTC 3 cut(s) 442, 546, 672
HpyCH4III ACNGT 3 cut(s) 10, 415, 637
HpyCH4IV ACGT 8 cut(s) 186, 213, 402, 438, 456, 640, 705, 808
HpyCH4V TGCA 1 cut(s) 608
HpyF10VI GCNNNNNNNGC 3 cut(s) 168, 240, 668
HpyF3I CTNAG 4 cut(s) 482, 590, 966, 983
HpySE526I ACGT 8 cut(s) 186, 213, 402, 438, 456, 640, 705, 808
Hsp92I GRCGYC 2 cut(s) 234, 504
HspAI GCGC 4 cut(s) 234, 509, 854, 912
KasI GGCGCC 1 cut(s) 233
KspI CCGCGG 1 cut(s) 163
Kzo9I GATC 2 cut(s) 577, 724
LmnI GCTCC 5 cut(s) 248, 351, 359, 893, 948
Lsp1109I GCAGC 3 cut(s) 510, 685, 974
LweI GCATC 2 cut(s) 63, 180
MaeI CTAG 1 cut(s) 561
MaeII ACGT 8 cut(s) 186, 213, 402, 438, 456, 640, 705, 808
MaeIII GTNAC 4 cut(s) 10, 220, 957, 969
MalI GATC 2 cut(s) 579, 726
MboI GATC 2 cut(s) 577, 724
MboII GAAGA 7 cut(s) 142, 379, 644, 800, 894, 920, 993
MflI RGATCY 1 cut(s) 724
MhlI GDGCHC 3 cut(s) 356, 953, 967
MluCI AATT 1 cut(s) 780
Mly113I GGCGCC 1 cut(s) 234
MlyI GAGTC 3 cut(s) 26, 236, 470
MmeI TCCRAC 3 cut(s) 96, 111, 718
MspA1I CMGCKG 1 cut(s) 162
MspI CCGG 2 cut(s) 231, 1027
MspR9I CCNGG 3 cut(s) 92, 954, 996
Mva1269I GAATGC 1 cut(s) 511
MvaI CCWGG 3 cut(s) 92, 954, 996
MvnI CGCG 5 cut(s) 126, 162, 273, 509, 914
MwoI GCNNNNNNNGC 3 cut(s) 168, 240, 668
NarI GGCGCC 1 cut(s) 234
NcoI CCATGG 2 cut(s) 36, 99
NdeII GATC 2 cut(s) 577, 724
NheI GCTAGC 1 cut(s) 560
NlaIV GGNNCC 4 cut(s) 202, 235, 895, 950
NmuCI GTSAC 4 cut(s) 10, 220, 957, 969
NspI RCATGY 2 cut(s) 805, 854
PaeI GCATGC 1 cut(s) 854
PasI CCCWGGG 1 cut(s) 953
PcsI WCGNNNNNNNCGW 3 cut(s) 54, 189, 432
PctI GAATGC 1 cut(s) 511
PfeI GAWTC 2 cut(s) 486, 772
Pfl23II CGTACG 1 cut(s) 757
PflFI GACNNNGTC 1 cut(s) 8
PleI GAGTC 3 cut(s) 25, 235, 469
PluTI GGCGCC 1 cut(s) 237
PpsI GAGTC 3 cut(s) 25, 235, 469
Psp124BI GAGCTC 2 cut(s) 356, 967
Psp6I CCWGG 3 cut(s) 90, 952, 994
PspFI CCCAGC 1 cut(s) 239
PspGI CCWGG 3 cut(s) 90, 952, 994
PspLI CGTACG 1 cut(s) 757
PspN4I GGNNCC 4 cut(s) 202, 235, 895, 950
PspPI GGNCC 3 cut(s) 118, 200, 938
PsuI RGATCY 1 cut(s) 724
PsyI GACNNNGTC 1 cut(s) 8
RsaI GTAC 4 cut(s) 595, 639, 759, 980
RsaNI GTAC 4 cut(s) 594, 638, 758, 979
SacI GAGCTC 2 cut(s) 356, 967
SacII CCGCGG 1 cut(s) 163
SalI GTCGAC 1 cut(s) 434
Sau3AI GATC 2 cut(s) 577, 724
Sau96I GGNCC 3 cut(s) 118, 200, 938
SchI GAGTC 3 cut(s) 26, 236, 470
ScrFI CCNGG 3 cut(s) 92, 954, 996
SduI GDGCHC 3 cut(s) 356, 953, 967
SfaNI GCATC 2 cut(s) 63, 180
SfoI GGCGCC 1 cut(s) 235
Sfr303I CCGCGG 1 cut(s) 163
SgrBI CCGCGG 1 cut(s) 163
SphI GCATGC 1 cut(s) 854
Sse9I AATT 1 cut(s) 780
SspDI GGCGCC 1 cut(s) 233
SspMI CTAG 1 cut(s) 561
SstI GAGCTC 2 cut(s) 356, 967
StyD4I CCNGG 3 cut(s) 90, 952, 994
StyI CCWWGG 3 cut(s) 36, 99, 347
TaaI ACNGT 3 cut(s) 10, 415, 637
TaiI ACGT 8 cut(s) 189, 216, 405, 441, 459, 643, 708, 811
TaqI TCGA 4 cut(s) 48, 192, 435, 576
TasI AATT 1 cut(s) 780
TauI GCSGC 7 cut(s) 44, 80, 98, 126, 273, 410, 509
TfiI GAWTC 2 cut(s) 486, 772
TscAI CASTG 2 cut(s) 672, 876
TseFI GTSAC 4 cut(s) 10, 220, 957, 969
TseI GCWGC 3 cut(s) 523, 698, 987
Tsp45I GTSAC 4 cut(s) 10, 220, 957, 969
TspDTI ATGAA 5 cut(s) 142, 370, 482, 504, 807
TspGWI ACGGA 1 cut(s) 100
TspRI CASTG 2 cut(s) 672, 876
Tth111I GACNNNGTC 1 cut(s) 8
XapI RAATTY 1 cut(s) 780
XceI RCATGY 2 cut(s) 805, 854
XmiI GTMKAC 2 cut(s) 435, 477
XspI CTAG 1 cut(s) 561
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.