Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0000729

Physical Location & Seq

Genomic Coordinates Forward (+)

49940345 .. 49943056

Gene Structure 2712 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G033830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1185 bp

ATGGACACCGTCACCGAGTCCCACATGGCCGTCTCCATGGCCGCCCTCGGCGGCATCGGCATCCTCCACTCCAACGCCGCCTCCTCCGACCAGGCCGCCATGGTCAGATCCGTCAAGGGCCGCCGCGTCCCCCTCCTTTCTGCCCCCGTCTTCATGTCCCGAGGAGACCGCATCCACAACGACGACGTTTTCAACCACGGCGCCAATCCCTACGTCCTCGTCACAGAGTCCGGCGCCCCCAACTCCAAGCTTTTGGGCTACATGGCGAGCCGCGATTGGGTGAAGCTGGCGGACAAGGAGGTCAAGATTTACGATTACATGGTCAGCTGTAAGGACATGGTTTTGCCTTGGAGCTCCGATTTGGGGAAGATTGAGGAGTTCATGGCGGAGAAAGGCCGTGACGTGGCGGCGATGGTGAGGGACGACGAAGTTGTCGACGTTGTGGGGAAGGAGGACATGGAGCGGAACAAGGGGTACCCAAAGTTGGGGGTCGGGTCGTGGAAGGTCGGGGCGGTGATAGGGACGAGGGAGTCGGATAAGGAGAGATTGGAGGAGTTGGTGAAGGCTGGGATTGATGTGGTGATTGAGATGATCAAGTACATCAAGAAAATGTACTCAGATTTGGATGTGGTTGGTGGGAATGTGGTGACTGTGAGTCAGGCACAGAATTTGATTCAGGCTGGTGTTGATGGGTTGAGGGTTGGGATGGGGTCTGGCTCCATTTGTACTACTCAAGAGGTTTGCGCCGTCGGCGGGGACAGTGGTGCTATTGGTGCAAGGTTGTCTTCTGATGCTTCAATTGTGAAGGCTCTTGTTGGTGACGCATTAGGCTTGATTGCTCAGAACATAGCAACAATCATAGCAGGACTGATTATAGTGGCAAATGATGCAATTGGTAGCATTCGAACTGTTGCATCATTTTGTTCTGAAAAGAAGGTGATGGATACGTATGAGAAGAAGTGTGAAGGTCCAATGAAACAAGGAGTACGATTGGGAGTAGTAAGTGGTACAGGTTTTGGCGCTTCATTTGTAGTAATGTTCTTCACAAATGCATTAATTTTCTATGTTGGAGCTCATCTTGTGAAAAATGGGCAAGCCACATTTGAACAAGTATTCAGGGTAAGCTTTCAGCAGCTTCCTCTCTTCCATACTCTTATCTCCATCCAAGTGTGTGCCTTGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003938 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006163 GO:0006164 GO:0006183 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009163 GO:0009165 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0010033 GO:0016491 GO:0016614 GO:0016616 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0034404 GO:0034641 GO:0034654 GO:0042221 GO:0042278 GO:0042451 GO:0042455 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046039 GO:0046128 GO:0046129 GO:0046390 GO:0046483 GO:0050896 GO:0055086 GO:0055114 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:1901068 GO:1901070 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00230 ko00983 ko01100 ko01110 map00230 map00983 map01100 map01110

Pfam Domains

Protein Families

IMPDH

Protein Analysis

394

Amino Acids

42.14

Weight (kDa)

5.93

Isoelectric Point (pI)

27.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IMPDH	PF00478	1 - 251	8.1e-40	IMP dehydrogenase / GMP reductase domain
ABC_membrane	PF00664	293 - 379	1.2e-15	ABC transporter transmembrane region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000729)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16350 AT1G79470
fragaria_vesca	FvH4_3g14430 FvH4_3g14430
malus_domestica	MD05G1237000.v1.1 MD05G1237500.v1.1 MD10G1213800.v1.1
prunus_persica	Prupe.4G129200_v2.0.a1 Prupe.4G129200_v2.0.a1
pyrus_communis	pycom05g21380 pycom10g18050 pycom10g18080 pycom10g18140 pycom10g18190
rosa_chinensis	RchiOBHm_Chr1g0350061 RchiOBHm_Chr2g0101951 RchiOBHm_Chr2g0155871 RchiOBHm_Chr3g0468611 RchiOBHm_Chr3g0493461 RchiOBHm_Chr4g0401281 RchiOBHm_Chr4g0402021 RchiOBHm_Chr5g0023561 RchiOBHm_Chr5g0023571 RchiOBHm_Chr5g0023741 RchiOBHm_Chr7g0231801 RchiOBHm_Chr7g0234111 RchiOBHm_Chr7g0238791 RchiOBHm_Chr7g0239601
rosa_laevigata	RLG00000032733
rosa_multiflora	Rmu_co8005014.1_g000001 Rmu_co8223904.1_g000001 Rmu_sc0000087.1_g000007 Rmu_sc0000110.1_g000028 Rmu_sc0000172.1_g000003 Rmu_sc0000689.1_g000019 Rmu_sc0000870.1_g000014 Rmu_sc0001372.1_g000011 Rmu_sc0001516.1_g000086 Rmu_sc0001653.1_g000008 Rmu_sc0002862.1_g000001 Rmu_sc0002862.1_g000002 Rmu_sc0008652.1_g000002 Rmu_sc0011789.1_g000002 Rmu_sc0013252.1_g000001 Rmu_sc0017256.1_g000001 Rmu_sc0017907.1_g000002 Rmu_sc0017907.1_g000003 Rmu_sc0018737.1_g000003 Rmu_sc0020536.1_g000001 Rmu_sc0025127.1_g000001 Rmu_sc0028608.1_g000001 Rmu_sc0029703.1_g000001 Rmu_ssc0000027.1_g000015
rosa_roxburghii	Rroxscaffold_1G00055450
rosa_rugosa	Rorug03G0326300 Rorug05G0079400 Rorug05G0352300
rosa_samantha	Rh5AG167200 Rh5AG169300 Rh5BG166700 Rh5CG181100 Rh5CG182300 Rh5DG168600 Rh6BG409700
rosa_wichuraiana	Rw0G001580 Rw0G004990 Rw1G017410 Rw2G027840 Rw4G002740 Rw5G015190 Rw5G015310 Rw7G033830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	299, 431, 529
Acc65I	GGTACC	1 cut(s)	474
AccB1I	GGYRCC	3 cut(s)	200, 233, 474
AccBSI	CCGCTC	1 cut(s)	463
AccI	GTMKAC	1 cut(s)	435
AccII	CGCG	2 cut(s)	126, 273
AclWI	GGATC	1 cut(s)	102
AcoI	YGGCCR	2 cut(s)	27, 39
AcsI	RAATTY	1 cut(s)	667
AcyI	GRCGYC	2 cut(s)	201, 234
AfaI	GTAC	6 cut(s)	476, 599, 614, 727, 987, 1009
AfiI	CCNNNNNNNGG	6 cut(s)	277, 363, 403, 484, 485, 753
AgsI	TTSAA	3 cut(s)	193, 798, 1106
AhdI	GACNNNNNGTC	1 cut(s)	654
AjiI	CACGTC	1 cut(s)	403
AjnI	CCWGG	1 cut(s)	90
AluBI	AGCT	7 cut(s)	250, 286, 327, 354, 1073, 1125, 1135
AluI	AGCT	7 cut(s)	250, 286, 327, 354, 1073, 1125, 1135
Alw21I	GWGCWC	2 cut(s)	356, 1075
Alw26I	GTCTC	2 cut(s)	37, 159
AlwI	GGATC	1 cut(s)	102
Ama87I	CYCGRG	1 cut(s)	159
AoxI	GGCC	5 cut(s)	27, 39, 93, 118, 394
ApeKI	GCWGC	1 cut(s)	1132
ApoI	RAATTY	1 cut(s)	667
AseI	ATTAAT	1 cut(s)	1055
Asp718I	GGTACC	1 cut(s)	474
AspLEI	GCGC	4 cut(s)	203, 236, 746, 1022
AspS9I	GGNCC	2 cut(s)	118, 968
AsuHPI	GGTGA	9 cut(s)	4, 292, 427, 526, 571, 592, 658, 830, 949
AsuII	TTCGAA	1 cut(s)	904
AvaI	CYCGRG	1 cut(s)	159
AvaII	GGWCC	1 cut(s)	968
BanI	GGYRCC	3 cut(s)	200, 233, 474
BanII	GRGCYC	2 cut(s)	356, 1075
BbsI	GAAGAC	2 cut(s)	142, 777
Bbv12I	GWGCWC	2 cut(s)	356, 1075
BbvI	GCAGC	1 cut(s)	1144
BccI	CCATC	5 cut(s)	406, 683, 700, 934, 1169
BceAI	ACGGC	4 cut(s)	14, 214, 381, 731
BciT130I	CCWGG	1 cut(s)	92
BciVI	GTATCC	1 cut(s)	937
BclI	TGATCA	1 cut(s)	591
BcoDI	GTCTC	2 cut(s)	37, 159
BfoI	RGCGCY	3 cut(s)	204, 237, 1023
BfuI	GTATCC	1 cut(s)	937
BisI	GCNGC	9 cut(s)	42, 52, 78, 96, 121, 124, 271, 408, 1133
BlsI	GCNGC	9 cut(s)	43, 53, 79, 97, 122, 125, 272, 409, 1134
Bme1390I	CCNGG	1 cut(s)	92
Bme18I	GGWCC	1 cut(s)	968
BmeRI	GACNNNNNGTC	1 cut(s)	654
BmeT110I	CYCGRG	1 cut(s)	159
BmgBI	CACGTC	1 cut(s)	403
BmgT120I	GGNCC	2 cut(s)	118, 968
BmiI	GGNNCC	4 cut(s)	202, 235, 476, 718
BmrFI	CCNGG	1 cut(s)	92
BmsI	GCATC	6 cut(s)	63, 69, 180, 781, 877, 923
BpiI	GAAGAC	2 cut(s)	142, 777
Bpu14I	TTCGAA	1 cut(s)	904
BpuEI	CTTGAG	1 cut(s)	717
BsaAI	YACGTR	1 cut(s)	948
BsaHI	GRCGYC	2 cut(s)	201, 234
BsaI	GGTCTC	1 cut(s)	159
BsaJI	CCNNGG	6 cut(s)	36, 46, 99, 160, 196, 347
BsaXI	ACNNNNNCTCC	2 cut(s)	65, 95
Bsc4I	CCNNNNNNNGG	6 cut(s)	277, 363, 403, 484, 485, 753
BseBI	CCWGG	1 cut(s)	92
BseDI	CCNNGG	6 cut(s)	36, 46, 99, 160, 196, 347
BseGI	GGATG	5 cut(s)	60, 171, 631, 711, 1161
BseLI	CCNNNNNNNGG	6 cut(s)	277, 363, 403, 484, 485, 753
BseMII	CTCAG	2 cut(s)	630, 854
BseRI	GAGGAG	4 cut(s)	73, 177, 389, 566
BseXI	GCAGC	1 cut(s)	1144
BseYI	CCCAGC	1 cut(s)	566
Bsh1236I	CGCG	2 cut(s)	126, 273
BshFI	GGCC	5 cut(s)	29, 41, 95, 120, 396
BshNI	GGYRCC	3 cut(s)	200, 233, 474
BsiHKAI	GWGCWC	2 cut(s)	356, 1075
BsiHKCI	CYCGRG	1 cut(s)	159
BsiSI	CCGG	1 cut(s)	231
BslFI	GGGAC	6 cut(s)	4, 113, 142, 434, 535, 770
BslI	CCNNNNNNNGG	6 cut(s)	277, 363, 403, 484, 485, 753
BsmAI	GTCTC	2 cut(s)	37, 159
BsmBI	CGTCTC	1 cut(s)	37
BsmFI	GGGAC	6 cut(s)	4, 113, 142, 434, 535, 770
BsmI	GAATGC	1 cut(s)	900
BsnI	GGCC	5 cut(s)	29, 41, 95, 120, 396
Bso31I	GGTCTC	1 cut(s)	159
BsoBI	CYCGRG	1 cut(s)	159
Bsp119I	TTCGAA	1 cut(s)	904
Bsp1286I	GDGCHC	2 cut(s)	356, 1075
Bsp143I	GATC	2 cut(s)	107, 591
Bsp19I	CCATGG	2 cut(s)	36, 99
BspANI	GGCC	5 cut(s)	29, 41, 95, 120, 396
BspCNI	CTCAG	2 cut(s)	629, 853
BspFNI	CGCG	2 cut(s)	126, 273
BspLI	GGNNCC	4 cut(s)	202, 235, 476, 718
BspPI	GGATC	1 cut(s)	102
BspT104I	TTCGAA	1 cut(s)	904
BspT107I	GGYRCC	3 cut(s)	200, 233, 474
BspTNI	GGTCTC	1 cut(s)	159
BsrBI	CCGCTC	1 cut(s)	463
BssECI	CCNNGG	6 cut(s)	36, 46, 99, 160, 196, 347
BssMI	GATC	2 cut(s)	107, 591
BssNI	GRCGYC	2 cut(s)	201, 234
BssT1I	CCWWGG	3 cut(s)	36, 99, 347
Bst2UI	CCWGG	1 cut(s)	92
Bst4CI	ACNGT	4 cut(s)	10, 652, 761, 910
Bst6I	CTCTTC	1 cut(s)	1148
BstACI	GRCGYC	2 cut(s)	201, 234
BstAPI	GCANNNNNTGC	1 cut(s)	887
BstBAI	YACGTR	1 cut(s)	948
BstBI	TTCGAA	1 cut(s)	904
BstC8I	GCNNGC	3 cut(s)	268, 288, 1095
BstDEI	CTNAG	2 cut(s)	616, 840
BstDSI	CCRYGG	3 cut(s)	36, 99, 196
BstF5I	GGATG	5 cut(s)	60, 171, 631, 711, 1161
BstFNI	CGCG	2 cut(s)	126, 273
BstH2I	RGCGCY	3 cut(s)	204, 237, 1023
BstHHI	GCGC	4 cut(s)	203, 236, 746, 1022
BstKTI	GATC	2 cut(s)	110, 594
BstMAI	GTCTC	2 cut(s)	37, 159
BstMBI	GATC	2 cut(s)	107, 591
BstMWI	GCNNNNNNNGC	4 cut(s)	57, 750, 773, 887
BstNI	CCWGG	1 cut(s)	92
BstSCI	CCNGG	1 cut(s)	90
BstSNI	TACGTA	1 cut(s)	948
BstUI	CGCG	2 cut(s)	126, 273
BstV1I	GCAGC	1 cut(s)	1144
BstV2I	GAAGAC	2 cut(s)	142, 777
BstX2I	RGATCY	1 cut(s)	107
BstXI	CCANNNNNNTGG	1 cut(s)	253
BstYI	RGATCY	1 cut(s)	107
BsuI	GTATCC	1 cut(s)	937
BsuRI	GGCC	5 cut(s)	29, 41, 95, 120, 396
BtgI	CCRYGG	3 cut(s)	36, 99, 196
BtgZI	GCGATG	1 cut(s)	425
BtrI	CACGTC	1 cut(s)	403
BtsCI	GGATG	5 cut(s)	60, 171, 631, 711, 1161
BtsIMutI	CAGTG	1 cut(s)	766
Cac8I	GCNNGC	3 cut(s)	268, 288, 1095
CfoI	GCGC	4 cut(s)	203, 236, 746, 1022
Cfr13I	GGNCC	2 cut(s)	118, 968
CseI	GACGC	2 cut(s)	115, 830
Csp6I	GTAC	6 cut(s)	475, 598, 613, 726, 986, 1008
CviAII	CATG	9 cut(s)	25, 37, 100, 154, 262, 319, 337, 382, 457
CviQI	GTAC	6 cut(s)	475, 598, 613, 726, 986, 1008
DdeI	CTNAG	2 cut(s)	616, 840
DinI	GGCGCC	2 cut(s)	202, 235
DpnI	GATC	2 cut(s)	109, 593
DpnII	GATC	2 cut(s)	107, 591
DrdI	GACNNNNNNGTC	3 cut(s)	299, 431, 529
DriI	GACNNNNNGTC	1 cut(s)	654
DseDI	GACNNNNNNGTC	3 cut(s)	299, 431, 529
EaeI	YGGCCR	2 cut(s)	27, 39
Eam1104I	CTCTTC	1 cut(s)	1148
Eam1105I	GACNNNNNGTC	1 cut(s)	654
EarI	CTCTTC	1 cut(s)	1148
EciI	GGCGGA	2 cut(s)	305, 401
Ecl136II	GAGCTC	2 cut(s)	354, 1073
Eco105I	TACGTA	1 cut(s)	948
Eco130I	CCWWGG	3 cut(s)	36, 99, 347
Eco24I	GRGCYC	2 cut(s)	356, 1075
Eco31I	GGTCTC	1 cut(s)	159
Eco47I	GGWCC	1 cut(s)	968
Eco53kI	GAGCTC	2 cut(s)	354, 1073
Eco88I	CYCGRG	1 cut(s)	159
EcoICRI	GAGCTC	2 cut(s)	354, 1073
EcoRII	CCWGG	1 cut(s)	90
EcoT14I	CCWWGG	3 cut(s)	36, 99, 347
EcoT22I	ATGCAT	1 cut(s)	1054
EcoT38I	GRGCYC	2 cut(s)	356, 1075
EgeI	GGCGCC	2 cut(s)	202, 235
EheI	GGCGCC	2 cut(s)	202, 235
ErhI	CCWWGG	3 cut(s)	36, 99, 347
Esp3I	CGTCTC	1 cut(s)	37
FaeI	CATG	9 cut(s)	28, 40, 103, 157, 265, 322, 340, 385, 460
FalI	AAGNNNNNCTT	2 cut(s)	769, 801
FaqI	GGGAC	6 cut(s)	4, 113, 142, 434, 535, 770
FatI	CATG	9 cut(s)	24, 36, 99, 153, 261, 318, 336, 381, 456
FauI	CCCGC	1 cut(s)	746
FbaI	TGATCA	1 cut(s)	591
FblI	GTMKAC	1 cut(s)	435
Fnu4HI	GCNGC	9 cut(s)	42, 52, 78, 96, 121, 124, 271, 408, 1133
FokI	GGATG	5 cut(s)	47, 158, 638, 718, 1148
FriOI	GRGCYC	2 cut(s)	356, 1075
Fsp4HI	GCNGC	9 cut(s)	42, 52, 78, 96, 121, 124, 271, 408, 1133
GlaI	GCGC	4 cut(s)	202, 235, 745, 1021
GluI	GCNGC	9 cut(s)	42, 52, 78, 96, 121, 124, 271, 408, 1133
GsaI	CCCAGC	1 cut(s)	570
HaeII	RGCGCY	3 cut(s)	204, 237, 1023
HaeIII	GGCC	5 cut(s)	29, 41, 95, 120, 396
HapII	CCGG	1 cut(s)	231
HgaI	GACGC	2 cut(s)	115, 830
HhaI	GCGC	4 cut(s)	203, 236, 746, 1022
Hin1I	GRCGYC	2 cut(s)	201, 234
Hin1II	CATG	9 cut(s)	28, 40, 103, 157, 265, 322, 340, 385, 460
Hin6I	GCGC	4 cut(s)	201, 234, 744, 1020
HinP1I	GCGC	4 cut(s)	201, 234, 744, 1020
HincII	GTYRAC	1 cut(s)	436
HindII	GTYRAC	1 cut(s)	436
HindIII	AAGCTT	2 cut(s)	248, 1123
HinfI	GANTC	5 cut(s)	17, 227, 530, 655, 673
HpaII	CCGG	1 cut(s)	231
HphI	GGTGA	9 cut(s)	4, 292, 427, 526, 571, 592, 658, 830, 949
Hpy166II	GTNNAC	1 cut(s)	436
Hpy188I	TCNGA	8 cut(s)	88, 107, 358, 535, 619, 790, 843, 928
Hpy188III	TCNNGA	4 cut(s)	159, 304, 604, 734
Hpy8I	GTNNAC	1 cut(s)	436
Hpy99I	CGWCG	5 cut(s)	185, 188, 428, 440, 752
HpyAV	CCTTC	6 cut(s)	442, 496, 556, 799, 928, 959
HpyCH4III	ACNGT	4 cut(s)	10, 652, 761, 910
HpyCH4IV	ACGT	5 cut(s)	186, 213, 402, 438, 947
HpyCH4V	TGCA	4 cut(s)	776, 890, 914, 1052
HpyF10VI	GCNNNNNNNGC	4 cut(s)	57, 750, 773, 887
HpyF3I	CTNAG	2 cut(s)	616, 840
HpySE526I	ACGT	5 cut(s)	186, 213, 402, 438, 947
Hsp92I	GRCGYC	2 cut(s)	201, 234
Hsp92II	CATG	9 cut(s)	28, 40, 103, 157, 265, 322, 340, 385, 460
HspAI	GCGC	4 cut(s)	201, 234, 744, 1020
KasI	GGCGCC	2 cut(s)	200, 233
KpnI	GGTACC	1 cut(s)	478
Ksp22I	TGATCA	1 cut(s)	591
Kzo9I	GATC	2 cut(s)	107, 591
LmnI	GCTCC	5 cut(s)	351, 359, 460, 722, 1070
Lsp1109I	GCAGC	1 cut(s)	1144
LweI	GCATC	6 cut(s)	63, 69, 180, 781, 877, 923
MaeII	ACGT	5 cut(s)	186, 213, 402, 438, 947
MaeIII	GTNAC	5 cut(s)	10, 220, 398, 646, 818
MalI	GATC	2 cut(s)	109, 593
MbiI	CCGCTC	1 cut(s)	463
MboI	GATC	2 cut(s)	107, 591
MboII	GAAGA	6 cut(s)	142, 379, 777, 967, 1033, 1135
MfeI	CAATTG	2 cut(s)	798, 891
MflI	RGATCY	1 cut(s)	107
MhlI	GDGCHC	2 cut(s)	356, 1075
MluCI	AATT	4 cut(s)	667, 798, 891, 1056
Mly113I	GGCGCC	2 cut(s)	201, 234
MlyI	GAGTC	4 cut(s)	26, 236, 539, 664
MmeI	TCCRAC	4 cut(s)	96, 111, 513, 1048
Mph1103I	ATGCAT	1 cut(s)	1054
MseI	TTAA	1 cut(s)	1055
MslI	CAYNNNNRTG	1 cut(s)	1166
MspA1I	CMGCKG	1 cut(s)	327
MspI	CCGG	1 cut(s)	231
MspR9I	CCNGG	1 cut(s)	92
MunI	CAATTG	2 cut(s)	798, 891
Mva1269I	GAATGC	1 cut(s)	900
MvaI	CCWGG	1 cut(s)	92
MvnI	CGCG	2 cut(s)	126, 273
MwoI	GCNNNNNNNGC	4 cut(s)	57, 750, 773, 887
NarI	GGCGCC	2 cut(s)	201, 234
NcoI	CCATGG	2 cut(s)	36, 99
NdeII	GATC	2 cut(s)	107, 591
NlaIII	CATG	9 cut(s)	28, 40, 103, 157, 265, 322, 340, 385, 460
NlaIV	GGNNCC	4 cut(s)	202, 235, 476, 718
NmeAIII	GCCGAG	1 cut(s)	27
NmuCI	GTSAC	5 cut(s)	10, 220, 398, 646, 818
NsiI	ATGCAT	1 cut(s)	1054
NspV	TTCGAA	1 cut(s)	904
PcsI	WCGNNNNNNNCGW	1 cut(s)	432
PctI	GAATGC	1 cut(s)	900
PfeI	GAWTC	1 cut(s)	673
PflFI	GACNNNGTC	1 cut(s)	8
PkrI	GCNGC	9 cut(s)	43, 53, 79, 97, 122, 125, 272, 409, 1134
PleI	GAGTC	4 cut(s)	25, 235, 538, 663
PluTI	GGCGCC	2 cut(s)	204, 237
PpsI	GAGTC	4 cut(s)	25, 235, 538, 663
Ppu21I	YACGTR	1 cut(s)	948
PshBI	ATTAAT	1 cut(s)	1055
Psp124BI	GAGCTC	2 cut(s)	356, 1075
Psp6I	CCWGG	1 cut(s)	90
PspFI	CCCAGC	1 cut(s)	566
PspGI	CCWGG	1 cut(s)	90
PspN4I	GGNNCC	4 cut(s)	202, 235, 476, 718
PspPI	GGNCC	2 cut(s)	118, 968
PsrI	GAACNNNNNNTAC	2 cut(s)	458, 490
PsuI	RGATCY	1 cut(s)	107
PsyI	GACNNNGTC	1 cut(s)	8
PvuII	CAGCTG	1 cut(s)	327
RsaI	GTAC	6 cut(s)	476, 599, 614, 727, 987, 1009
RsaNI	GTAC	6 cut(s)	475, 598, 613, 726, 986, 1008
RseI	CAYNNNNRTG	1 cut(s)	1166
SacI	GAGCTC	2 cut(s)	356, 1075
SalI	GTCGAC	1 cut(s)	434
SaqAI	TTAA	1 cut(s)	1055
SatI	GCNGC	9 cut(s)	42, 52, 78, 96, 121, 124, 271, 408, 1133
Sau3AI	GATC	2 cut(s)	107, 591
Sau96I	GGNCC	2 cut(s)	118, 968
SchI	GAGTC	4 cut(s)	26, 236, 539, 664
ScrFI	CCNGG	1 cut(s)	92
SduI	GDGCHC	2 cut(s)	356, 1075
SfaNI	GCATC	6 cut(s)	63, 69, 180, 781, 877, 923
SfoI	GGCGCC	2 cut(s)	202, 235
SfuI	TTCGAA	1 cut(s)	904
SinI	GGWCC	1 cut(s)	968
SmiMI	CAYNNNNRTG	1 cut(s)	1166
SmlI	CTYRAG	1 cut(s)	732
SmoI	CTYRAG	1 cut(s)	732
SnaBI	TACGTA	1 cut(s)	948
Sse9I	AATT	4 cut(s)	667, 798, 891, 1056
SspDI	GGCGCC	2 cut(s)	200, 233
SstI	GAGCTC	2 cut(s)	356, 1075
StyD4I	CCNGG	1 cut(s)	90
StyI	CCWWGG	3 cut(s)	36, 99, 347
TaaI	ACNGT	4 cut(s)	10, 652, 761, 910
TaiI	ACGT	5 cut(s)	189, 216, 405, 441, 950
TaqI	TCGA	2 cut(s)	435, 904
TasI	AATT	4 cut(s)	667, 798, 891, 1056
TatI	WGTACW	3 cut(s)	597, 612, 725
TauI	GCSGC	8 cut(s)	44, 54, 80, 98, 123, 126, 273, 410
TfiI	GAWTC	1 cut(s)	673
Tru1I	TTAA	1 cut(s)	1055
Tru9I	TTAA	1 cut(s)	1055
TscAI	CASTG	1 cut(s)	766
TseFI	GTSAC	5 cut(s)	10, 220, 398, 646, 818
TseI	GCWGC	1 cut(s)	1132
Tsp45I	GTSAC	5 cut(s)	10, 220, 398, 646, 818
TspDTI	ATGAA	4 cut(s)	142, 370, 989, 1014
TspGWI	ACGGA	1 cut(s)	100
TspRI	CASTG	1 cut(s)	766
Tth111I	GACNNNGTC	1 cut(s)	8
VpaK11BI	GGWCC	1 cut(s)	968
VspI	ATTAAT	1 cut(s)	1055
XapI	RAATTY	1 cut(s)	667
XmiI	GTMKAC	1 cut(s)	435
Zsp2I	ATGCAT	1 cut(s)	1054

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.