Rmu_sc0028608.1_g000001

Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0028608.1
Physical Location & Seq
Forward (+)
581 .. 1210
630 bp
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UTR
Exon/CDS
Intron
Rmu_sc0028608.1_g000001.1.cds

Sequence Viewer

Length: 315 bp
atgatcaagtgcatcaagaaaatctactcagatttggatgtggttggtgggaatgtggtgactgtgagtcaggcgcagaatttgattcaggcttgtgttgatgggttgagggttgggatggggtctggctccatttgtactactaaagaggtttgtgccgtcggcaagggacaggcaactgcggtttataaggttgcatctgttgcttcacagagtggtgtgcctatcattgccgatggtggaatttccaattctggacacattgtcaaggctttaacccttggggcttctactgtcatgatgggaagcttctag

Protein Analysis

104

Amino Acids

10.43

Weight (kDa)

8.78

Isoelectric Point (pI)

19.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000729)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16350 AT1G79470
fragaria_vesca FvH4_3g14430 FvH4_3g14430
malus_domestica MD05G1237000.v1.1 MD05G1237500.v1.1 MD10G1213800.v1.1
prunus_persica Prupe.4G129200_v2.0.a1 Prupe.4G129200_v2.0.a1
pyrus_communis pycom05g21380 pycom10g18050 pycom10g18080 pycom10g18140 pycom10g18190
rosa_chinensis RchiOBHm_Chr1g0350061 RchiOBHm_Chr2g0101951 RchiOBHm_Chr2g0155871 RchiOBHm_Chr3g0468611 RchiOBHm_Chr3g0493461 RchiOBHm_Chr4g0401281 RchiOBHm_Chr4g0402021 RchiOBHm_Chr5g0023561 RchiOBHm_Chr5g0023571 RchiOBHm_Chr5g0023741 RchiOBHm_Chr7g0231801 RchiOBHm_Chr7g0234111 RchiOBHm_Chr7g0238791 RchiOBHm_Chr7g0239601
rosa_laevigata RLG00000032733
rosa_multiflora Rmu_co8005014.1_g000001 Rmu_co8223904.1_g000001 Rmu_sc0000087.1_g000007 Rmu_sc0000110.1_g000028 Rmu_sc0000172.1_g000003 Rmu_sc0000689.1_g000019 Rmu_sc0000870.1_g000014 Rmu_sc0001372.1_g000011 Rmu_sc0001516.1_g000086 Rmu_sc0001653.1_g000008 Rmu_sc0002862.1_g000001 Rmu_sc0002862.1_g000002 Rmu_sc0008652.1_g000002 Rmu_sc0011789.1_g000002 Rmu_sc0013252.1_g000001 Rmu_sc0017256.1_g000001 Rmu_sc0017907.1_g000002 Rmu_sc0017907.1_g000003 Rmu_sc0018737.1_g000003 Rmu_sc0020536.1_g000001 Rmu_sc0025127.1_g000001 Rmu_sc0028608.1_g000001 Rmu_sc0029703.1_g000001 Rmu_ssc0000027.1_g000015
rosa_roxburghii Rroxscaffold_1G00055450
rosa_rugosa Rorug03G0326300 Rorug05G0079400 Rorug05G0352300
rosa_samantha Rh5AG167200 Rh5AG169300 Rh5BG166700 Rh5CG181100 Rh5CG182300 Rh5DG168600 Rh6BG409700
rosa_wichuraiana Rw0G001580 Rw0G004990 Rw1G017410 Rw2G027840 Rw4G002740 Rw5G015190 Rw5G015310 Rw7G033830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 189
AciI CCGC 1 cut(s) 182
AcsI RAATTY 2 cut(s) 79, 243
AdeI CACNNNGTG 1 cut(s) 215
AfaI GTAC 1 cut(s) 139
AhdI GACNNNNNGTC 2 cut(s) 66, 263
AluBI AGCT 1 cut(s) 309
AluI AGCT 1 cut(s) 309
ApoI RAATTY 2 cut(s) 79, 243
AspLEI GCGC 1 cut(s) 76
AsuHPI GGTGA 1 cut(s) 70
BccI CCATC 4 cut(s) 95, 112, 230, 295
BceAI ACGGC 1 cut(s) 143
BclI TGATCA 1 cut(s) 3
BfaI CTAG 1 cut(s) 313
BmeRI GACNNNNNGTC 2 cut(s) 66, 263
BmiI GGNNCC 1 cut(s) 130
BmsI GCATC 2 cut(s) 21, 206
BsaJI CCNNGG 1 cut(s) 280
Bse3DI GCAATG 1 cut(s) 228
BseDI CCNNGG 1 cut(s) 280
BseGI GGATG 2 cut(s) 43, 123
BseMI GCAATG 1 cut(s) 228
BseMII CTCAG 1 cut(s) 42
BslFI GGGAC 1 cut(s) 183
BsmFI GGGAC 1 cut(s) 183
Bsp143I GATC 1 cut(s) 3
BspACI CCGC 1 cut(s) 182
BspCNI CTCAG 1 cut(s) 41
BspHI TCATGA 1 cut(s) 297
BspLI GGNNCC 1 cut(s) 130
BsrDI GCAATG 1 cut(s) 228
BssECI CCNNGG 1 cut(s) 280
BssMI GATC 1 cut(s) 3
BssT1I CCWWGG 1 cut(s) 280
Bst4CI ACNGT 2 cut(s) 64, 295
BstAPI GCANNNNNTGC 1 cut(s) 203
BstDEI CTNAG 1 cut(s) 28
BstF5I GGATG 2 cut(s) 43, 123
BstHHI GCGC 1 cut(s) 76
BstKTI GATC 1 cut(s) 6
BstMBI GATC 1 cut(s) 3
BstMWI GCNNNNNNNGC 1 cut(s) 203
BtsCI GGATG 2 cut(s) 43, 123
CciI TCATGA 1 cut(s) 297
CfoI GCGC 1 cut(s) 76
Csp6I GTAC 1 cut(s) 138
CviAII CATG 1 cut(s) 298
CviJI RGCY 5 cut(s) 92, 129, 272, 287, 309
CviKI_1 RGCY 5 cut(s) 92, 129, 272, 287, 309
CviQI GTAC 1 cut(s) 138
DdeI CTNAG 1 cut(s) 28
DpnI GATC 1 cut(s) 5
DpnII GATC 1 cut(s) 3
DraIII CACNNNGTG 1 cut(s) 215
DriI GACNNNNNGTC 2 cut(s) 66, 263
Eam1105I GACNNNNNGTC 2 cut(s) 66, 263
Eco130I CCWWGG 1 cut(s) 280
EcoT14I CCWWGG 1 cut(s) 280
ErhI CCWWGG 1 cut(s) 280
FaeI CATG 1 cut(s) 301
FaiI YATR 2 cut(s) 189, 299
FaqI GGGAC 1 cut(s) 183
FatI CATG 1 cut(s) 297
FbaI TGATCA 1 cut(s) 3
FokI GGATG 2 cut(s) 50, 130
FspBI CTAG 1 cut(s) 313
GlaI GCGC 1 cut(s) 75
HhaI GCGC 1 cut(s) 76
Hin1II CATG 1 cut(s) 301
Hin6I GCGC 1 cut(s) 74
HinP1I GCGC 1 cut(s) 74
HindIII AAGCTT 1 cut(s) 307
HinfI GANTC 2 cut(s) 67, 85
HphI GGTGA 1 cut(s) 70
Hpy188I TCNGA 1 cut(s) 31
Hpy188III TCNNGA 3 cut(s) 16, 255, 298
Hpy99I CGWCG 1 cut(s) 164
HpyCH4III ACNGT 2 cut(s) 64, 295
HpyCH4V TGCA 2 cut(s) 12, 197
HpyF10VI GCNNNNNNNGC 1 cut(s) 203
HpyF3I CTNAG 1 cut(s) 28
Hsp92II CATG 1 cut(s) 301
HspAI GCGC 1 cut(s) 74
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 1 cut(s) 3
LmnI GCTCC 1 cut(s) 134
LpnPI CCDG 5 cut(s) 56, 74, 111, 158, 240
LweI GCATC 2 cut(s) 21, 206
MaeI CTAG 1 cut(s) 313
MaeIII GTNAC 1 cut(s) 58
MalI GATC 1 cut(s) 5
MboI GATC 1 cut(s) 3
MluCI AATT 3 cut(s) 79, 243, 250
MlyI GAGTC 1 cut(s) 76
MnlI CCTC 2 cut(s) 102, 142
MseI TTAA 1 cut(s) 275
MwoI GCNNNNNNNGC 1 cut(s) 203
NdeII GATC 1 cut(s) 3
NlaIII CATG 1 cut(s) 301
NlaIV GGNNCC 1 cut(s) 130
NmuCI GTSAC 1 cut(s) 58
PagI TCATGA 1 cut(s) 297
PfeI GAWTC 1 cut(s) 85
PleI GAGTC 1 cut(s) 75
PpsI GAGTC 1 cut(s) 75
PsiI TTATAA 1 cut(s) 189
PspN4I GGNNCC 1 cut(s) 130
RsaI GTAC 1 cut(s) 139
RsaNI GTAC 1 cut(s) 138
SaqAI TTAA 1 cut(s) 275
Sau3AI GATC 1 cut(s) 3
SchI GAGTC 1 cut(s) 76
SetI ASST 3 cut(s) 153, 195, 311
SfaNI GCATC 2 cut(s) 21, 206
Sse9I AATT 3 cut(s) 79, 243, 250
SsiI CCGC 1 cut(s) 182
SspMI CTAG 1 cut(s) 313
StyI CCWWGG 1 cut(s) 280
TaaI ACNGT 2 cut(s) 64, 295
TasI AATT 3 cut(s) 79, 243, 250
TatI WGTACW 1 cut(s) 137
TfiI GAWTC 1 cut(s) 85
Tru1I TTAA 1 cut(s) 275
Tru9I TTAA 1 cut(s) 275
TseFI GTSAC 1 cut(s) 58
Tsp45I GTSAC 1 cut(s) 58
XapI RAATTY 2 cut(s) 79, 243
XspI CTAG 1 cut(s) 313
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.