Rmu_sc0002862.1_g000001

Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002862.1
Physical Location & Seq
Reverse (-)
1 .. 507
507 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002862.1_g000001.1.cds

Sequence Viewer

Length: 297 bp
atggtggataaaggccgggacgtggcggcgacggtgagggacgacgaggttgtcgacgttgtggggaaggaggacgtggagcggatcaaggggtacccgaagttgggggtcgggtcggttgggccagacgggtcgtggaaggtctgggcggcgatagagacgagggagtctgataaggagagattggaggagttggtgaaggctgggattgatgtggtggcgcataatttgattcaggctggtgttgatgggttgagggttgggatggggtctggctccatttgtactactcaagag

Protein Analysis

99

Amino Acids

10.56

Weight (kDa)

4.76

Isoelectric Point (pI)

11.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000729)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16350 AT1G79470
fragaria_vesca FvH4_3g14430 FvH4_3g14430
malus_domestica MD05G1237000.v1.1 MD05G1237500.v1.1 MD10G1213800.v1.1
prunus_persica Prupe.4G129200_v2.0.a1 Prupe.4G129200_v2.0.a1
pyrus_communis pycom05g21380 pycom10g18050 pycom10g18080 pycom10g18140 pycom10g18190
rosa_chinensis RchiOBHm_Chr1g0350061 RchiOBHm_Chr2g0101951 RchiOBHm_Chr2g0155871 RchiOBHm_Chr3g0468611 RchiOBHm_Chr3g0493461 RchiOBHm_Chr4g0401281 RchiOBHm_Chr4g0402021 RchiOBHm_Chr5g0023561 RchiOBHm_Chr5g0023571 RchiOBHm_Chr5g0023741 RchiOBHm_Chr7g0231801 RchiOBHm_Chr7g0234111 RchiOBHm_Chr7g0238791 RchiOBHm_Chr7g0239601
rosa_laevigata RLG00000032733
rosa_multiflora Rmu_co8005014.1_g000001 Rmu_co8223904.1_g000001 Rmu_sc0000087.1_g000007 Rmu_sc0000110.1_g000028 Rmu_sc0000172.1_g000003 Rmu_sc0000689.1_g000019 Rmu_sc0000870.1_g000014 Rmu_sc0001372.1_g000011 Rmu_sc0001516.1_g000086 Rmu_sc0001653.1_g000008 Rmu_sc0002862.1_g000001 Rmu_sc0002862.1_g000002 Rmu_sc0008652.1_g000002 Rmu_sc0011789.1_g000002 Rmu_sc0013252.1_g000001 Rmu_sc0017256.1_g000001 Rmu_sc0017907.1_g000002 Rmu_sc0017907.1_g000003 Rmu_sc0018737.1_g000003 Rmu_sc0020536.1_g000001 Rmu_sc0025127.1_g000001 Rmu_sc0028608.1_g000001 Rmu_sc0029703.1_g000001 Rmu_ssc0000027.1_g000015
rosa_roxburghii Rroxscaffold_1G00055450
rosa_rugosa Rorug03G0326300 Rorug05G0079400 Rorug05G0352300
rosa_samantha Rh5AG167200 Rh5AG169300 Rh5BG166700 Rh5CG181100 Rh5CG182300 Rh5DG168600 Rh6BG409700
rosa_wichuraiana Rw0G001580 Rw0G004990 Rw1G017410 Rw2G027840 Rw4G002740 Rw5G015190 Rw5G015310 Rw7G033830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 50, 166
Acc65I GGTACC 1 cut(s) 93
AccB1I GGYRCC 1 cut(s) 93
AccBSI CCGCTC 1 cut(s) 82
AccI GTMKAC 1 cut(s) 54
AciI CCGC 3 cut(s) 26, 82, 149
AclWI GGATC 1 cut(s) 92
AfaI GTAC 2 cut(s) 95, 286
AfiI CCNNNNNNNGG 3 cut(s) 22, 103, 104
AjiI CACGTC 2 cut(s) 22, 76
Alw26I GTCTC 1 cut(s) 152
AlwI GGATC 1 cut(s) 92
AoxI GGCC 2 cut(s) 13, 122
Asp718I GGTACC 1 cut(s) 93
AspLEI GCGC 1 cut(s) 223
AspS9I GGNCC 1 cut(s) 122
AsuC2I CCSGG 1 cut(s) 17
AsuHPI GGTGA 2 cut(s) 46, 208
BanI GGYRCC 1 cut(s) 93
BccI CCATC 2 cut(s) 242, 259
BcnI CCSGG 1 cut(s) 17
BcoDI GTCTC 1 cut(s) 152
BisI GCNGC 2 cut(s) 27, 150
BlsI GCNGC 2 cut(s) 28, 151
Bme1390I CCNGG 1 cut(s) 17
BmgBI CACGTC 2 cut(s) 22, 76
BmgT120I GGNCC 1 cut(s) 122
BmiI GGNNCC 2 cut(s) 95, 277
BmrFI CCNGG 1 cut(s) 17
BpuEI CTTGAG 1 cut(s) 276
BpuMI CCSGG 1 cut(s) 17
Bsc4I CCNNNNNNNGG 3 cut(s) 22, 103, 104
BseGI GGATG 1 cut(s) 270
BseLI CCNNNNNNNGG 3 cut(s) 22, 103, 104
BseRI GAGGAG 1 cut(s) 203
BseYI CCCAGC 1 cut(s) 203
BshFI GGCC 2 cut(s) 15, 124
BshNI GGYRCC 1 cut(s) 93
BsiSI CCGG 1 cut(s) 16
BslFI GGGAC 2 cut(s) 32, 53
BslI CCNNNNNNNGG 3 cut(s) 22, 103, 104
BsmAI GTCTC 1 cut(s) 152
BsmBI CGTCTC 1 cut(s) 152
BsmFI GGGAC 2 cut(s) 32, 53
BsnI GGCC 2 cut(s) 15, 124
Bsp143I GATC 1 cut(s) 84
BspACI CCGC 3 cut(s) 26, 82, 149
BspANI GGCC 2 cut(s) 15, 124
BspLI GGNNCC 2 cut(s) 95, 277
BspPI GGATC 1 cut(s) 92
BspT107I GGYRCC 1 cut(s) 93
BsrBI CCGCTC 1 cut(s) 82
BssMI GATC 1 cut(s) 84
Bst4CI ACNGT 1 cut(s) 34
BstF5I GGATG 1 cut(s) 270
BstHHI GCGC 1 cut(s) 223
BstKTI GATC 1 cut(s) 87
BstMAI GTCTC 1 cut(s) 152
BstMBI GATC 1 cut(s) 84
BstSCI CCNGG 1 cut(s) 15
BsuRI GGCC 2 cut(s) 15, 124
BtrI CACGTC 2 cut(s) 22, 76
BtsCI GGATG 1 cut(s) 270
CfoI GCGC 1 cut(s) 223
Cfr13I GGNCC 1 cut(s) 122
Csp6I GTAC 2 cut(s) 94, 285
CviJI RGCY 5 cut(s) 15, 124, 203, 239, 276
CviKI_1 RGCY 5 cut(s) 15, 124, 203, 239, 276
CviQI GTAC 2 cut(s) 94, 285
DpnI GATC 1 cut(s) 86
DpnII GATC 1 cut(s) 84
DrdI GACNNNNNNGTC 2 cut(s) 50, 166
DseDI GACNNNNNNGTC 2 cut(s) 50, 166
Esp3I CGTCTC 1 cut(s) 152
FaiI YATR 1 cut(s) 225
FaqI GGGAC 2 cut(s) 32, 53
FblI GTMKAC 1 cut(s) 54
Fnu4HI GCNGC 2 cut(s) 27, 150
FokI GGATG 1 cut(s) 277
Fsp4HI GCNGC 2 cut(s) 27, 150
GlaI GCGC 1 cut(s) 222
GluI GCNGC 2 cut(s) 27, 150
GsaI CCCAGC 1 cut(s) 207
HaeIII GGCC 2 cut(s) 15, 124
HapII CCGG 1 cut(s) 16
HhaI GCGC 1 cut(s) 223
Hin6I GCGC 1 cut(s) 221
HinP1I GCGC 1 cut(s) 221
HincII GTYRAC 1 cut(s) 55
HindII GTYRAC 1 cut(s) 55
HinfI GANTC 2 cut(s) 167, 232
HpaII CCGG 1 cut(s) 16
HphI GGTGA 2 cut(s) 46, 208
Hpy166II GTNNAC 1 cut(s) 55
Hpy188I TCNGA 1 cut(s) 172
Hpy188III TCNNGA 1 cut(s) 293
Hpy8I GTNNAC 1 cut(s) 55
Hpy99I CGWCG 3 cut(s) 34, 47, 59
HpyAV CCTTC 3 cut(s) 61, 133, 193
HpyCH4III ACNGT 1 cut(s) 34
HpyCH4IV ACGT 3 cut(s) 21, 57, 75
HpySE526I ACGT 3 cut(s) 21, 57, 75
HspAI GCGC 1 cut(s) 221
KpnI GGTACC 1 cut(s) 97
Kzo9I GATC 1 cut(s) 84
LmnI GCTCC 2 cut(s) 79, 281
LpnPI CCDG 7 cut(s) 29, 130, 138, 189, 221, 225, 258
MaeII ACGT 3 cut(s) 21, 57, 75
MalI GATC 1 cut(s) 86
MbiI CCGCTC 1 cut(s) 82
MboI GATC 1 cut(s) 84
MluCI AATT 1 cut(s) 226
MlyI GAGTC 1 cut(s) 176
MnlI CCTC 6 cut(s) 30, 40, 64, 156, 181, 249
MspI CCGG 1 cut(s) 16
MspR9I CCNGG 1 cut(s) 17
NciI CCSGG 1 cut(s) 17
NdeII GATC 1 cut(s) 84
NlaIV GGNNCC 2 cut(s) 95, 277
PcsI WCGNNNNNNNCGW 1 cut(s) 51
PfeI GAWTC 1 cut(s) 232
PkrI GCNGC 2 cut(s) 28, 151
PleI GAGTC 1 cut(s) 175
PpsI GAGTC 1 cut(s) 175
PspFI CCCAGC 1 cut(s) 203
PspN4I GGNNCC 2 cut(s) 95, 277
PspPI GGNCC 1 cut(s) 122
RsaI GTAC 2 cut(s) 95, 286
RsaNI GTAC 2 cut(s) 94, 285
SalI GTCGAC 1 cut(s) 53
SatI GCNGC 2 cut(s) 27, 150
Sau3AI GATC 1 cut(s) 84
Sau96I GGNCC 1 cut(s) 122
SchI GAGTC 1 cut(s) 176
ScrFI CCNGG 1 cut(s) 17
SetI ASST 5 cut(s) 24, 51, 60, 78, 144
SmlI CTYRAG 1 cut(s) 291
SmoI CTYRAG 1 cut(s) 291
Sse9I AATT 1 cut(s) 226
SsiI CCGC 3 cut(s) 26, 82, 149
StyD4I CCNGG 1 cut(s) 15
TaaI ACNGT 1 cut(s) 34
TaiI ACGT 3 cut(s) 24, 60, 78
TaqI TCGA 1 cut(s) 54
TasI AATT 1 cut(s) 226
TatI WGTACW 1 cut(s) 284
TauI GCSGC 2 cut(s) 29, 152
TfiI GAWTC 1 cut(s) 232
XcmI CCANNNNNNNNNTGG 1 cut(s) 132
XmiI GTMKAC 1 cut(s) 54
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.