Rmu_sc0017256.1_g000001

Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0017256.1
Physical Location & Seq
Reverse (-)
2 .. 159
158 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0017256.1_g000001.1.cds

Sequence Viewer

Length: 158 bp
atggacacagtcactgagtcccacatggcagtctccatggccgccctcggcggcatcgtcatcctccactgcaacgttgcctcctccgaccaggccgccatggtcagatccgtcaaggcccgccgcgtccccctcctctccgcccccgtcttcatgtc

Protein Analysis

53

Amino Acids

5.56

Weight (kDa)

8.02

Isoelectric Point (pI)

61.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000729)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16350 AT1G79470
fragaria_vesca FvH4_3g14430 FvH4_3g14430
malus_domestica MD05G1237000.v1.1 MD05G1237500.v1.1 MD10G1213800.v1.1
prunus_persica Prupe.4G129200_v2.0.a1 Prupe.4G129200_v2.0.a1
pyrus_communis pycom05g21380 pycom10g18050 pycom10g18080 pycom10g18140 pycom10g18190
rosa_chinensis RchiOBHm_Chr1g0350061 RchiOBHm_Chr2g0101951 RchiOBHm_Chr2g0155871 RchiOBHm_Chr3g0468611 RchiOBHm_Chr3g0493461 RchiOBHm_Chr4g0401281 RchiOBHm_Chr4g0402021 RchiOBHm_Chr5g0023561 RchiOBHm_Chr5g0023571 RchiOBHm_Chr5g0023741 RchiOBHm_Chr7g0231801 RchiOBHm_Chr7g0234111 RchiOBHm_Chr7g0238791 RchiOBHm_Chr7g0239601
rosa_laevigata RLG00000032733
rosa_multiflora Rmu_co8005014.1_g000001 Rmu_co8223904.1_g000001 Rmu_sc0000087.1_g000007 Rmu_sc0000110.1_g000028 Rmu_sc0000172.1_g000003 Rmu_sc0000689.1_g000019 Rmu_sc0000870.1_g000014 Rmu_sc0001372.1_g000011 Rmu_sc0001516.1_g000086 Rmu_sc0001653.1_g000008 Rmu_sc0002862.1_g000001 Rmu_sc0002862.1_g000002 Rmu_sc0008652.1_g000002 Rmu_sc0011789.1_g000002 Rmu_sc0013252.1_g000001 Rmu_sc0017256.1_g000001 Rmu_sc0017907.1_g000002 Rmu_sc0017907.1_g000003 Rmu_sc0018737.1_g000003 Rmu_sc0020536.1_g000001 Rmu_sc0025127.1_g000001 Rmu_sc0028608.1_g000001 Rmu_sc0029703.1_g000001 Rmu_ssc0000027.1_g000015
rosa_roxburghii Rroxscaffold_1G00055450
rosa_rugosa Rorug03G0326300 Rorug05G0079400 Rorug05G0352300
rosa_samantha Rh5AG167200 Rh5AG169300 Rh5BG166700 Rh5CG181100 Rh5CG182300 Rh5DG168600 Rh6BG409700
rosa_wichuraiana Rw0G001580 Rw0G004990 Rw1G017410 Rw2G027840 Rw4G002740 Rw5G015190 Rw5G015310 Rw7G033830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 126
AciI CCGC 6 cut(s) 42, 51, 96, 121, 124, 141
AclI AACGTT 1 cut(s) 75
AclWI GGATC 1 cut(s) 102
AcoI YGGCCR 1 cut(s) 39
AjnI CCWGG 1 cut(s) 90
Alw26I GTCTC 1 cut(s) 37
AlwI GGATC 1 cut(s) 102
AlwNI CAGNNNCTG 1 cut(s) 14
AoxI GGCC 3 cut(s) 39, 93, 117
AspS9I GGNCC 1 cut(s) 118
BbsI GAAGAC 1 cut(s) 142
BciT130I CCWGG 1 cut(s) 92
BcoDI GTCTC 1 cut(s) 37
BisI GCNGC 4 cut(s) 42, 52, 96, 124
BlsI GCNGC 4 cut(s) 43, 53, 97, 125
Bme1390I CCNGG 1 cut(s) 92
BmgT120I GGNCC 1 cut(s) 118
BmrFI CCNGG 1 cut(s) 92
BmsI GCATC 1 cut(s) 63
BpiI GAAGAC 1 cut(s) 142
BsaJI CCNNGG 3 cut(s) 36, 46, 99
BsaXI ACNNNNNCTCC 2 cut(s) 65, 95
BseBI CCWGG 1 cut(s) 92
BseDI CCNNGG 3 cut(s) 36, 46, 99
BseGI GGATG 1 cut(s) 60
BseMII CTCAG 1 cut(s) 6
BseRI GAGGAG 2 cut(s) 73, 125
Bsh1236I CGCG 1 cut(s) 126
BshFI GGCC 3 cut(s) 41, 95, 119
BslFI GGGAC 2 cut(s) 4, 113
BsmAI GTCTC 1 cut(s) 37
BsmFI GGGAC 2 cut(s) 4, 113
BsnI GGCC 3 cut(s) 41, 95, 119
Bsp143I GATC 1 cut(s) 107
Bsp19I CCATGG 2 cut(s) 36, 99
BspACI CCGC 6 cut(s) 42, 51, 96, 121, 124, 141
BspANI GGCC 3 cut(s) 41, 95, 119
BspCNI CTCAG 1 cut(s) 7
BspFNI CGCG 1 cut(s) 126
BspPI GGATC 1 cut(s) 102
BssECI CCNNGG 3 cut(s) 36, 46, 99
BssMI GATC 1 cut(s) 107
BssT1I CCWWGG 2 cut(s) 36, 99
Bst2UI CCWGG 1 cut(s) 92
Bst4CI ACNGT 1 cut(s) 10
BstC8I GCNNGC 1 cut(s) 121
BstDEI CTNAG 1 cut(s) 15
BstDSI CCRYGG 2 cut(s) 36, 99
BstF5I GGATG 1 cut(s) 60
BstFNI CGCG 1 cut(s) 126
BstKTI GATC 1 cut(s) 110
BstMAI GTCTC 1 cut(s) 37
BstMBI GATC 1 cut(s) 107
BstNI CCWGG 1 cut(s) 92
BstSCI CCNGG 1 cut(s) 90
BstUI CGCG 1 cut(s) 126
BstV2I GAAGAC 1 cut(s) 142
BstX2I RGATCY 1 cut(s) 107
BstYI RGATCY 1 cut(s) 107
BsuRI GGCC 3 cut(s) 41, 95, 119
BtgI CCRYGG 2 cut(s) 36, 99
BtsCI GGATG 1 cut(s) 60
BtsI GCAGTG 1 cut(s) 67
BtsIMutI CAGTG 2 cut(s) 12, 67
Cac8I GCNNGC 1 cut(s) 121
CaiI CAGNNNCTG 1 cut(s) 14
Cfr13I GGNCC 1 cut(s) 118
CseI GACGC 1 cut(s) 115
CviAII CATG 4 cut(s) 25, 37, 100, 154
CviJI RGCY 3 cut(s) 41, 95, 119
CviKI_1 RGCY 3 cut(s) 41, 95, 119
DdeI CTNAG 1 cut(s) 15
DpnI GATC 1 cut(s) 109
DpnII GATC 1 cut(s) 107
EaeI YGGCCR 1 cut(s) 39
EciI GGCGGA 1 cut(s) 130
Eco130I CCWWGG 2 cut(s) 36, 99
EcoRII CCWGG 1 cut(s) 90
EcoT14I CCWWGG 2 cut(s) 36, 99
ErhI CCWWGG 2 cut(s) 36, 99
FaeI CATG 4 cut(s) 28, 40, 103, 157
FaiI YATR 4 cut(s) 26, 38, 101, 155
FaqI GGGAC 2 cut(s) 4, 113
FatI CATG 4 cut(s) 24, 36, 99, 153
FauI CCCGC 1 cut(s) 128
Fnu4HI GCNGC 4 cut(s) 42, 52, 96, 124
FokI GGATG 1 cut(s) 47
Fsp4HI GCNGC 4 cut(s) 42, 52, 96, 124
GluI GCNGC 4 cut(s) 42, 52, 96, 124
HaeIII GGCC 3 cut(s) 41, 95, 119
HgaI GACGC 1 cut(s) 115
Hin1II CATG 4 cut(s) 28, 40, 103, 157
HinfI GANTC 1 cut(s) 17
Hpy188I TCNGA 2 cut(s) 88, 107
HpyCH4III ACNGT 1 cut(s) 10
HpyCH4IV ACGT 1 cut(s) 75
HpyCH4V TGCA 1 cut(s) 72
HpyF3I CTNAG 1 cut(s) 15
HpySE526I ACGT 1 cut(s) 75
Hsp92II CATG 4 cut(s) 28, 40, 103, 157
Kzo9I GATC 1 cut(s) 107
LpnPI CCDG 2 cut(s) 77, 104
LweI GCATC 1 cut(s) 63
MaeII ACGT 1 cut(s) 75
MaeIII GTNAC 1 cut(s) 10
MalI GATC 1 cut(s) 109
MboI GATC 1 cut(s) 107
MboII GAAGA 1 cut(s) 142
MflI RGATCY 1 cut(s) 107
MlyI GAGTC 1 cut(s) 26
MmeI TCCRAC 1 cut(s) 111
MnlI CCTC 6 cut(s) 56, 74, 91, 94, 143, 146
MspR9I CCNGG 1 cut(s) 92
MvaI CCWGG 1 cut(s) 92
MvnI CGCG 1 cut(s) 126
NcoI CCATGG 2 cut(s) 36, 99
NdeII GATC 1 cut(s) 107
NlaIII CATG 4 cut(s) 28, 40, 103, 157
NmeAIII GCCGAG 1 cut(s) 27
NmuCI GTSAC 1 cut(s) 10
PcsI WCGNNNNNNNCGW 1 cut(s) 54
PflFI GACNNNGTC 1 cut(s) 8
PkrI GCNGC 4 cut(s) 43, 53, 97, 125
PleI GAGTC 1 cut(s) 25
PpsI GAGTC 1 cut(s) 25
Psp1406I AACGTT 1 cut(s) 75
Psp6I CCWGG 1 cut(s) 90
PspGI CCWGG 1 cut(s) 90
PspPI GGNCC 1 cut(s) 118
PstNI CAGNNNCTG 1 cut(s) 14
PsuI RGATCY 1 cut(s) 107
PsyI GACNNNGTC 1 cut(s) 8
SatI GCNGC 4 cut(s) 42, 52, 96, 124
Sau3AI GATC 1 cut(s) 107
Sau96I GGNCC 1 cut(s) 118
SchI GAGTC 1 cut(s) 26
ScrFI CCNGG 1 cut(s) 92
SetI ASST 1 cut(s) 78
SfaNI GCATC 1 cut(s) 63
SgeI CNNG 9 cut(s) 37, 49, 59, 103, 104, 112, 127, 132, 137
SsiI CCGC 6 cut(s) 42, 51, 96, 121, 124, 141
StyD4I CCNGG 1 cut(s) 90
StyI CCWWGG 2 cut(s) 36, 99
TaaI ACNGT 1 cut(s) 10
TaiI ACGT 1 cut(s) 78
TauI GCSGC 4 cut(s) 44, 54, 98, 126
TscAI CASTG 2 cut(s) 19, 74
TseFI GTSAC 1 cut(s) 10
Tsp45I GTSAC 1 cut(s) 10
TspDTI ATGAA 1 cut(s) 142
TspGWI ACGGA 1 cut(s) 100
TspRI CASTG 2 cut(s) 19, 74
Tth111I GACNNNGTC 1 cut(s) 8
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.