Rmu_sc0013252.1_g000001

Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013252.1
Physical Location & Seq
Forward (+)
1 .. 1462
1462 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013252.1_g000001.1.cds

Sequence Viewer

Length: 909 bp
aatagcctctccatcccctgcgtctcctcccccatggacaccatcaccgagtcccacatggcagtctccatggccgccctttgcggcatcgacatcctccactccaacgccgcctcctccaaccaggcctccatggtcagatccgtcaaggccggccgcgtccccctcatctctgcccccatcttcatgtcccgcggagaccgtatccacaacgacgaagttttcgaccacggcgccaatccctacgtcctcgtcaccgagtccggcgtccccaactccaagcttttgggctacataatgagccgcgattgggtgaagctggcggacaaggaggtcaagatttacgattacatggttagctgtaaggacatggttttgccttggagctccgatttggggaagattgaggagttcatggaagataaaggccaggacgtggcggcgacggtgagggacgacgaggttgtcgacgttgtggggaaggaggacgtggagcggatgaaggggtacccgaagttgggggtcgggtcggttgggccagacgggtcgtggaaggtctgggcgtcgatagagatgagggagtctgataaggagagattggaggagttggtgaaggctgggattgatgtggtggcgcataatttgattcaggctggtgttgatgggttgagggttgggatggggtctggctccatttgtactactcaagaggcaactgcggtttacaaggttgcatctgttgcttcacaaagtggtgtgcctgtcattgctgatggtggaatttccaattctggacacattgtcaaggctttaacccttggggcttctactgtcatgatgggaagcttcttagctggaagcactgaggttcatggggcttatgagtatcaggtaatgcttgagatatga

Protein Analysis

302

Amino Acids

32.25

Weight (kDa)

4.91

Isoelectric Point (pI)

32.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000729)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16350 AT1G79470
fragaria_vesca FvH4_3g14430 FvH4_3g14430
malus_domestica MD05G1237000.v1.1 MD05G1237500.v1.1 MD10G1213800.v1.1
prunus_persica Prupe.4G129200_v2.0.a1 Prupe.4G129200_v2.0.a1
pyrus_communis pycom05g21380 pycom10g18050 pycom10g18080 pycom10g18140 pycom10g18190
rosa_chinensis RchiOBHm_Chr1g0350061 RchiOBHm_Chr2g0101951 RchiOBHm_Chr2g0155871 RchiOBHm_Chr3g0468611 RchiOBHm_Chr3g0493461 RchiOBHm_Chr4g0401281 RchiOBHm_Chr4g0402021 RchiOBHm_Chr5g0023561 RchiOBHm_Chr5g0023571 RchiOBHm_Chr5g0023741 RchiOBHm_Chr7g0231801 RchiOBHm_Chr7g0234111 RchiOBHm_Chr7g0238791 RchiOBHm_Chr7g0239601
rosa_laevigata RLG00000032733
rosa_multiflora Rmu_co8005014.1_g000001 Rmu_co8223904.1_g000001 Rmu_sc0000087.1_g000007 Rmu_sc0000110.1_g000028 Rmu_sc0000172.1_g000003 Rmu_sc0000689.1_g000019 Rmu_sc0000870.1_g000014 Rmu_sc0001372.1_g000011 Rmu_sc0001516.1_g000086 Rmu_sc0001653.1_g000008 Rmu_sc0002862.1_g000001 Rmu_sc0002862.1_g000002 Rmu_sc0008652.1_g000002 Rmu_sc0011789.1_g000002 Rmu_sc0013252.1_g000001 Rmu_sc0017256.1_g000001 Rmu_sc0017907.1_g000002 Rmu_sc0017907.1_g000003 Rmu_sc0018737.1_g000003 Rmu_sc0020536.1_g000001 Rmu_sc0025127.1_g000001 Rmu_sc0028608.1_g000001 Rmu_sc0029703.1_g000001 Rmu_ssc0000027.1_g000015
rosa_roxburghii Rroxscaffold_1G00055450
rosa_rugosa Rorug03G0326300 Rorug05G0079400 Rorug05G0352300
rosa_samantha Rh5AG167200 Rh5AG169300 Rh5BG166700 Rh5CG181100 Rh5CG182300 Rh5DG168600 Rh6BG409700
rosa_wichuraiana Rw0G001580 Rw0G004990 Rw1G017410 Rw2G027840 Rw4G002740 Rw5G015190 Rw5G015310 Rw7G033830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 332, 464
Acc65I GGTACC 1 cut(s) 507
AccB1I GGYRCC 2 cut(s) 233, 507
AccB7I CCANNNNNTGG 1 cut(s) 436
AccBSI CCGCTC 1 cut(s) 496
AccI GTMKAC 1 cut(s) 468
AccII CGCG 3 cut(s) 159, 195, 306
AclWI GGATC 1 cut(s) 135
AcoI YGGCCR 2 cut(s) 72, 154
AcsI RAATTY 1 cut(s) 780
AcyI GRCGYC 3 cut(s) 234, 267, 563
AdeI CACNNNGTG 1 cut(s) 752
AfaI GTAC 2 cut(s) 509, 700
AfiI CCNNNNNNNGG 5 cut(s) 310, 396, 436, 517, 518
AhdI GACNNNNNGTC 1 cut(s) 800
AjiI CACGTC 2 cut(s) 436, 490
AjnI CCWGG 2 cut(s) 123, 429
AluBI AGCT 6 cut(s) 283, 319, 360, 387, 846, 854
AluI AGCT 6 cut(s) 283, 319, 360, 387, 846, 854
Alw21I GWGCWC 1 cut(s) 389
Alw26I GTCTC 3 cut(s) 28, 70, 192
AlwI GGATC 1 cut(s) 135
AoxI GGCC 6 cut(s) 72, 126, 150, 154, 427, 536
ApoI RAATTY 1 cut(s) 780
ArsI GACNNNNNNTTYG 2 cut(s) 206, 238
Asp718I GGTACC 1 cut(s) 507
AspLEI GCGC 2 cut(s) 236, 637
AspS9I GGNCC 1 cut(s) 536
AsuHPI GGTGA 5 cut(s) 37, 247, 325, 460, 622
BanI GGYRCC 2 cut(s) 233, 507
BanII GRGCYC 1 cut(s) 389
Bbv12I GWGCWC 1 cut(s) 389
BccI CCATC 7 cut(s) 20, 50, 188, 656, 673, 767, 832
BceAI ACGGC 1 cut(s) 247
BciT130I CCWGG 2 cut(s) 125, 431
BciVI GTATCC 1 cut(s) 215
BcoDI GTCTC 3 cut(s) 28, 70, 192
BfoI RGCGCY 1 cut(s) 237
BfuI GTATCC 1 cut(s) 215
BisI GCNGC 6 cut(s) 75, 85, 111, 157, 304, 441
BlsI GCNGC 6 cut(s) 76, 86, 112, 158, 305, 442
Bme1390I CCNGG 2 cut(s) 125, 431
BmeRI GACNNNNNGTC 1 cut(s) 800
BmgBI CACGTC 2 cut(s) 436, 490
BmgT120I GGNCC 1 cut(s) 536
BmiI GGNNCC 3 cut(s) 235, 509, 691
BmrFI CCNGG 2 cut(s) 125, 431
BmsI GCATC 2 cut(s) 96, 743
BpuEI CTTGAG 1 cut(s) 690
BsaHI GRCGYC 3 cut(s) 234, 267, 563
BsaI GGTCTC 1 cut(s) 192
BsaJI CCNNGG 7 cut(s) 33, 69, 132, 193, 229, 380, 817
BsaXI ACNNNNNCTCC 4 cut(s) 98, 113, 128, 143
Bsc4I CCNNNNNNNGG 5 cut(s) 310, 396, 436, 517, 518
Bse118I RCCGGY 1 cut(s) 152
Bse3DI GCAATG 1 cut(s) 765
BseBI CCWGG 2 cut(s) 125, 431
BseDI CCNNGG 7 cut(s) 33, 69, 132, 193, 229, 380, 817
BseGI GGATG 4 cut(s) 12, 93, 504, 684
BseLI CCNNNNNNNGG 5 cut(s) 310, 396, 436, 517, 518
BseMI GCAATG 1 cut(s) 765
BseMII CTCAG 1 cut(s) 855
BseRI GAGGAG 4 cut(s) 16, 106, 422, 617
BseX3I CGGCCG 1 cut(s) 154
BseYI CCCAGC 1 cut(s) 617
Bsh1236I CGCG 3 cut(s) 159, 195, 306
Bsh1285I CGRYCG 1 cut(s) 157
BshFI GGCC 6 cut(s) 74, 128, 152, 156, 429, 538
BshNI GGYRCC 2 cut(s) 233, 507
BsiEI CGRYCG 1 cut(s) 157
BsiHKAI GWGCWC 1 cut(s) 389
BsiSI CCGG 2 cut(s) 153, 264
BslFI GGGAC 5 cut(s) 37, 146, 175, 254, 467
BslI CCNNNNNNNGG 5 cut(s) 310, 396, 436, 517, 518
BsmAI GTCTC 3 cut(s) 28, 70, 192
BsmBI CGTCTC 1 cut(s) 28
BsmFI GGGAC 5 cut(s) 37, 146, 175, 254, 467
BsnI GGCC 6 cut(s) 74, 128, 152, 156, 429, 538
Bso31I GGTCTC 1 cut(s) 192
Bsp1286I GDGCHC 1 cut(s) 389
Bsp143I GATC 1 cut(s) 140
Bsp19I CCATGG 3 cut(s) 33, 69, 132
BspANI GGCC 6 cut(s) 74, 128, 152, 156, 429, 538
BspCNI CTCAG 1 cut(s) 856
BspFNI CGCG 3 cut(s) 159, 195, 306
BspHI TCATGA 1 cut(s) 834
BspLI GGNNCC 3 cut(s) 235, 509, 691
BspPI GGATC 1 cut(s) 135
BspT107I GGYRCC 2 cut(s) 233, 507
BspTNI GGTCTC 1 cut(s) 192
BsrBI CCGCTC 1 cut(s) 496
BsrDI GCAATG 1 cut(s) 765
BsrFI RCCGGY 1 cut(s) 152
BssAI RCCGGY 1 cut(s) 152
BssECI CCNNGG 7 cut(s) 33, 69, 132, 193, 229, 380, 817
BssMI GATC 1 cut(s) 140
BssNI GRCGYC 3 cut(s) 234, 267, 563
BssT1I CCWWGG 5 cut(s) 33, 69, 132, 380, 817
Bst2UI CCWGG 2 cut(s) 125, 431
Bst4CI ACNGT 3 cut(s) 203, 448, 832
BstACI GRCGYC 3 cut(s) 234, 267, 563
BstAPI GCANNNNNTGC 1 cut(s) 740
BstC8I GCNNGC 2 cut(s) 154, 321
BstDEI CTNAG 2 cut(s) 850, 864
BstDSI CCRYGG 5 cut(s) 33, 69, 132, 193, 229
BstF5I GGATG 4 cut(s) 12, 93, 504, 684
BstFNI CGCG 3 cut(s) 159, 195, 306
BstH2I RGCGCY 1 cut(s) 237
BstHHI GCGC 2 cut(s) 236, 637
BstKTI GATC 1 cut(s) 143
BstMAI GTCTC 3 cut(s) 28, 70, 192
BstMBI GATC 1 cut(s) 140
BstMCI CGRYCG 1 cut(s) 157
BstMWI GCNNNNNNNGC 1 cut(s) 740
BstNI CCWGG 2 cut(s) 125, 431
BstSCI CCNGG 2 cut(s) 123, 429
BstUI CGCG 3 cut(s) 159, 195, 306
BstX2I RGATCY 1 cut(s) 140
BstXI CCANNNNNNTGG 1 cut(s) 286
BstYI RGATCY 1 cut(s) 140
BstZI CGGCCG 1 cut(s) 154
BsuI GTATCC 1 cut(s) 215
BsuRI GGCC 6 cut(s) 74, 128, 152, 156, 429, 538
BtgI CCRYGG 5 cut(s) 33, 69, 132, 193, 229
BtrI CACGTC 2 cut(s) 436, 490
BtsCI GGATG 4 cut(s) 12, 93, 504, 684
BtsIMutI CAGTG 1 cut(s) 861
Cac8I GCNNGC 2 cut(s) 154, 321
CciI TCATGA 1 cut(s) 834
CfoI GCGC 2 cut(s) 236, 637
Cfr10I RCCGGY 1 cut(s) 152
Cfr13I GGNCC 1 cut(s) 536
Cfr42I CCGCGG 1 cut(s) 196
CseI GACGC 4 cut(s) 10, 148, 256, 552
Csp6I GTAC 2 cut(s) 508, 699
CviQI GTAC 2 cut(s) 508, 699
DdeI CTNAG 2 cut(s) 850, 864
DinI GGCGCC 1 cut(s) 235
DpnI GATC 1 cut(s) 142
DpnII GATC 1 cut(s) 140
DraIII CACNNNGTG 1 cut(s) 752
DrdI GACNNNNNNGTC 2 cut(s) 332, 464
DriI GACNNNNNGTC 1 cut(s) 800
DseDI GACNNNNNNGTC 2 cut(s) 332, 464
EaeI YGGCCR 2 cut(s) 72, 154
EagI CGGCCG 1 cut(s) 154
Eam1105I GACNNNNNGTC 1 cut(s) 800
EciI GGCGGA 1 cut(s) 338
Ecl136II GAGCTC 1 cut(s) 387
EclXI CGGCCG 1 cut(s) 154
Eco130I CCWWGG 5 cut(s) 33, 69, 132, 380, 817
Eco147I AGGCCT 1 cut(s) 128
Eco24I GRGCYC 1 cut(s) 389
Eco31I GGTCTC 1 cut(s) 192
Eco52I CGGCCG 1 cut(s) 154
Eco53kI GAGCTC 1 cut(s) 387
EcoICRI GAGCTC 1 cut(s) 387
EcoRII CCWGG 2 cut(s) 123, 429
EcoT14I CCWWGG 5 cut(s) 33, 69, 132, 380, 817
EcoT38I GRGCYC 1 cut(s) 389
EgeI GGCGCC 1 cut(s) 235
EheI GGCGCC 1 cut(s) 235
ErhI CCWWGG 5 cut(s) 33, 69, 132, 380, 817
Esp3I CGTCTC 1 cut(s) 28
FaqI GGGAC 5 cut(s) 37, 146, 175, 254, 467
FauI CCCGC 1 cut(s) 200
FblI GTMKAC 1 cut(s) 468
Fnu4HI GCNGC 6 cut(s) 75, 85, 111, 157, 304, 441
FokI GGATG 3 cut(s) 80, 511, 691
FriOI GRGCYC 1 cut(s) 389
FseI GGCCGGCC 1 cut(s) 156
Fsp4HI GCNGC 6 cut(s) 75, 85, 111, 157, 304, 441
GlaI GCGC 2 cut(s) 235, 636
GluI GCNGC 6 cut(s) 75, 85, 111, 157, 304, 441
GsaI CCCAGC 1 cut(s) 621
HaeII RGCGCY 1 cut(s) 237
HaeIII GGCC 6 cut(s) 74, 128, 152, 156, 429, 538
HapII CCGG 2 cut(s) 153, 264
HgaI GACGC 4 cut(s) 10, 148, 256, 552
HhaI GCGC 2 cut(s) 236, 637
Hin1I GRCGYC 3 cut(s) 234, 267, 563
Hin6I GCGC 2 cut(s) 234, 635
HinP1I GCGC 2 cut(s) 234, 635
HincII GTYRAC 1 cut(s) 469
HindII GTYRAC 1 cut(s) 469
HindIII AAGCTT 2 cut(s) 281, 844
HinfI GANTC 4 cut(s) 50, 260, 581, 646
HpaII CCGG 2 cut(s) 153, 264
HphI GGTGA 5 cut(s) 37, 247, 325, 460, 622
Hpy166II GTNNAC 2 cut(s) 469, 724
Hpy188I TCNGA 3 cut(s) 140, 391, 586
Hpy188III TCNNGA 4 cut(s) 337, 707, 792, 835
Hpy8I GTNNAC 2 cut(s) 469, 724
Hpy99I CGWCG 5 cut(s) 218, 448, 461, 473, 568
HpyAV CCTTC 4 cut(s) 475, 496, 547, 607
HpyCH4III ACNGT 3 cut(s) 203, 448, 832
HpyCH4IV ACGT 4 cut(s) 246, 435, 471, 489
HpyCH4V TGCA 1 cut(s) 734
HpyF10VI GCNNNNNNNGC 1 cut(s) 740
HpyF3I CTNAG 2 cut(s) 850, 864
HpySE526I ACGT 4 cut(s) 246, 435, 471, 489
Hsp92I GRCGYC 3 cut(s) 234, 267, 563
HspAI GCGC 2 cut(s) 234, 635
KasI GGCGCC 1 cut(s) 233
KpnI GGTACC 1 cut(s) 511
KroI GCCGGC 1 cut(s) 152
KroNI GCCGGC 1 cut(s) 154
KspI CCGCGG 1 cut(s) 196
Kzo9I GATC 1 cut(s) 140
LmnI GCTCC 4 cut(s) 384, 392, 493, 695
LweI GCATC 2 cut(s) 96, 743
MaeII ACGT 4 cut(s) 246, 435, 471, 489
MaeIII GTNAC 1 cut(s) 253
MalI GATC 1 cut(s) 142
MbiI CCGCTC 1 cut(s) 496
MboI GATC 1 cut(s) 140
MboII GAAGA 3 cut(s) 175, 412, 431
MflI RGATCY 1 cut(s) 140
MhlI GDGCHC 1 cut(s) 389
MluCI AATT 3 cut(s) 640, 780, 787
Mly113I GGCGCC 1 cut(s) 234
MlyI GAGTC 3 cut(s) 59, 269, 590
MmeI TCCRAC 2 cut(s) 129, 144
MroNI GCCGGC 1 cut(s) 152
MseI TTAA 1 cut(s) 812
MslI CAYNNNNRTG 1 cut(s) 185
MspA1I CMGCKG 1 cut(s) 195
MspI CCGG 2 cut(s) 153, 264
MspR9I CCNGG 2 cut(s) 125, 431
MvaI CCWGG 2 cut(s) 125, 431
MvnI CGCG 3 cut(s) 159, 195, 306
MwoI GCNNNNNNNGC 1 cut(s) 740
NaeI GCCGGC 1 cut(s) 154
NarI GGCGCC 1 cut(s) 234
NcoI CCATGG 3 cut(s) 33, 69, 132
NdeII GATC 1 cut(s) 140
NgoMIV GCCGGC 1 cut(s) 152
NlaIV GGNNCC 3 cut(s) 235, 509, 691
NmuCI GTSAC 1 cut(s) 253
PagI TCATGA 1 cut(s) 834
PceI AGGCCT 1 cut(s) 128
PcsI WCGNNNNNNNCGW 2 cut(s) 222, 465
PdiI GCCGGC 1 cut(s) 154
PfeI GAWTC 1 cut(s) 646
PflMI CCANNNNNTGG 1 cut(s) 436
PkrI GCNGC 6 cut(s) 76, 86, 112, 158, 305, 442
PleI GAGTC 3 cut(s) 58, 268, 589
PluTI GGCGCC 1 cut(s) 237
PpsI GAGTC 3 cut(s) 58, 268, 589
Psp124BI GAGCTC 1 cut(s) 389
Psp6I CCWGG 2 cut(s) 123, 429
PspFI CCCAGC 1 cut(s) 617
PspGI CCWGG 2 cut(s) 123, 429
PspN4I GGNNCC 3 cut(s) 235, 509, 691
PspPI GGNCC 1 cut(s) 536
PsuI RGATCY 1 cut(s) 140
RigI GGCCGGCC 1 cut(s) 156
RsaI GTAC 2 cut(s) 509, 700
RsaNI GTAC 2 cut(s) 508, 699
RseI CAYNNNNRTG 1 cut(s) 185
SacI GAGCTC 1 cut(s) 389
SacII CCGCGG 1 cut(s) 196
SalI GTCGAC 1 cut(s) 467
SaqAI TTAA 1 cut(s) 812
SatI GCNGC 6 cut(s) 75, 85, 111, 157, 304, 441
Sau3AI GATC 1 cut(s) 140
Sau96I GGNCC 1 cut(s) 536
SchI GAGTC 3 cut(s) 59, 269, 590
ScrFI CCNGG 2 cut(s) 125, 431
SduI GDGCHC 1 cut(s) 389
SfaNI GCATC 2 cut(s) 96, 743
SfoI GGCGCC 1 cut(s) 235
Sfr303I CCGCGG 1 cut(s) 196
SgrBI CCGCGG 1 cut(s) 196
SmiMI CAYNNNNRTG 1 cut(s) 185
SmlI CTYRAG 2 cut(s) 705, 899
SmoI CTYRAG 2 cut(s) 705, 899
Sse9I AATT 3 cut(s) 640, 780, 787
SseBI AGGCCT 1 cut(s) 128
SspDI GGCGCC 1 cut(s) 233
SstI GAGCTC 1 cut(s) 389
StuI AGGCCT 1 cut(s) 128
StyD4I CCNGG 2 cut(s) 123, 429
StyI CCWWGG 5 cut(s) 33, 69, 132, 380, 817
TaaI ACNGT 3 cut(s) 203, 448, 832
TaiI ACGT 4 cut(s) 249, 438, 474, 492
TaqI TCGA 4 cut(s) 90, 225, 468, 566
TasI AATT 3 cut(s) 640, 780, 787
TatI WGTACW 1 cut(s) 698
TauI GCSGC 6 cut(s) 77, 87, 113, 159, 306, 443
TfiI GAWTC 1 cut(s) 646
Tru1I TTAA 1 cut(s) 812
Tru9I TTAA 1 cut(s) 812
TscAI CASTG 1 cut(s) 868
TseFI GTSAC 1 cut(s) 253
Tsp45I GTSAC 1 cut(s) 253
TspDTI ATGAA 4 cut(s) 175, 403, 515, 860
TspGWI ACGGA 1 cut(s) 133
TspRI CASTG 1 cut(s) 868
Van91I CCANNNNNTGG 1 cut(s) 436
XapI RAATTY 1 cut(s) 780
XcmI CCANNNNNNNNNTGG 1 cut(s) 546
XmiI GTMKAC 1 cut(s) 468
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.