Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0000729

Physical Location & Seq

Genomic Coordinates Reverse (-)

17536263 .. 17541062

Gene Structure 4800 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG166700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGTCAATCATCGAAGACGGCTTCTCCTCCGACCGCCTCTTCAACCAGGGCTACTCCTACACCTACGATGACGTCATCTTCCTCCCTCACTACATCGACTTCCCCACCGACGCCGTCCTCCTCCCCACCAAGCTCTCCCGCCGCCTCCCCCTCTCCATCCCCTGCGTCTCCTCCCCCATGGACACCGTCACCGAGTCCCGCATGGCCGTCTCCATGGCCGCCCTCGGCGGCATCGGCATCCTCCACTCCAATGCCGCCCCCTCCGACCAGGCCGCCATGGTCAGATCCGTCAAGGCCCGCCGCGTCCCCCTCCTCTCCGCCCCCGTCTTCATGTCCCCCGGAGACCGCATCCACAACGACGACGTTTTCGACCACGGCGCCAATCCCTACGTCCTCGTCACCGAGTCCGGCGCCCCCAGCTCCAAGCTTTTGGGCTACGTGGCGAGCCGCGATTGGGTGAAGCTGGCGGACAAGGAGGTCAAGATTTACGATTACATGGTCAGCTGCAAGGACATGGTTTTGCCGTGGAGCTCCGATTTGGGGAAGATTGAGGAGTTCATGGCGGAGAAGGGCCGTGACGTGGCGGCGACGGTGAGGGACGACGAGGTTGTGGACGTTGTGGGGAAGAAGGACGTGGAGCGGATCAGGGGGTACCCGAAGTTGGGGGTCGGGTCGGTTGGGCCCGACGGGTTGTGGAGGGTCGGGGCGGCGATAGGGACGAGGGAGTCGGATAAGGAGAGATTGGAGAAGTTGGTGAAGGCTGGGATTGATGTGGTGGTGTTGGATAGCTCACAGGGGAACTCCATTTATCAGATTGAGATGATCAAGTACATTAAGAAAATGTACTCAGATTTGGATGTGGTTGGTGGGAATGTGGTGACTGTGAGTCAGGCGCAGAATTTGATTCAGGCTGGTGTTGATGGGTTGAGGGTTGGGATGGGGTCTGGCTCCATTTGTACTACTCAAGAGGTTTGCGCCGTAGGGAGGGGACAGGCAACTGCGGTTTACAAGGTTGCATCTGTTGCTTCACAAAGTGGCGTGCCTGTCATTGCTGATGGTGGAATTTCCAATTCTGGACACATTGTCAAGGCTTTAACCCTTGGGGCTTCTACTGTCATGATGGGGAGCTTCTTAGCTGGAAGTACTGAGGCCCCTGGGGCTTATGAGAATCAGAATGGTCGCCGGATCAAAAAATACCGAGGCATGGGCTCTCTTGAAGCGATGACAAAAGGGAGTGATCAAAGGTATCTGGGAGATACAGCGAAGCTGAAGATTGCACAGGGGGTGGTTGGTGCAGTTGCAGACAAAGGTTCTGTTTTGAAGTTTGTACCGTACACAATGCAAGCGGTGAAACAAGGTTTCCAAGATCTCGGCGCTTCTTCTCTGCAGTCTGCTCATGACCTCTTAAGATCAGGGGTTTTAAGGCTAGAGGTATTGCTACCCATAATGCGTATGTTGTTGTTTTGTTATTATCAAGGAATCATTTCTATCATATGCTTGAATCACAAATTATGTTATAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003938 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006163 GO:0006164 GO:0006183 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009163 GO:0009165 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0010033 GO:0016491 GO:0016614 GO:0016616 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0034404 GO:0034641 GO:0034654 GO:0042221 GO:0042278 GO:0042451 GO:0042455 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046039 GO:0046128 GO:0046129 GO:0046390 GO:0046483 GO:0050896 GO:0055086 GO:0055114 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:1901068 GO:1901070 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00230 ko00983 ko01100 ko01110 map00230 map00983 map01100 map01110

Pfam Domains

Protein Families

IMPDH

Protein Analysis

507

Amino Acids

54.49

Weight (kDa)

7.56

Isoelectric Point (pI)

35.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IMPDH	PF00478	20 - 465	3.7e-121	IMP dehydrogenase / GMP reductase domain
FMN_dh	PF01070	267 - 377	1.5e-07	FMN-dependent dehydrogenase
NMO	PF03060	288 - 384	1.5e-07	Nitronate monooxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000729)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16350 AT1G79470
fragaria_vesca	FvH4_3g14430 FvH4_3g14430
malus_domestica	MD05G1237000.v1.1 MD05G1237500.v1.1 MD10G1213800.v1.1
prunus_persica	Prupe.4G129200_v2.0.a1 Prupe.4G129200_v2.0.a1
pyrus_communis	pycom05g21380 pycom10g18050 pycom10g18080 pycom10g18140 pycom10g18190
rosa_chinensis	RchiOBHm_Chr1g0350061 RchiOBHm_Chr2g0101951 RchiOBHm_Chr2g0155871 RchiOBHm_Chr3g0468611 RchiOBHm_Chr3g0493461 RchiOBHm_Chr4g0401281 RchiOBHm_Chr4g0402021 RchiOBHm_Chr5g0023561 RchiOBHm_Chr5g0023571 RchiOBHm_Chr5g0023741 RchiOBHm_Chr7g0231801 RchiOBHm_Chr7g0234111 RchiOBHm_Chr7g0238791 RchiOBHm_Chr7g0239601
rosa_laevigata	RLG00000032733
rosa_multiflora	Rmu_co8005014.1_g000001 Rmu_co8223904.1_g000001 Rmu_sc0000087.1_g000007 Rmu_sc0000110.1_g000028 Rmu_sc0000172.1_g000003 Rmu_sc0000689.1_g000019 Rmu_sc0000870.1_g000014 Rmu_sc0001372.1_g000011 Rmu_sc0001516.1_g000086 Rmu_sc0001653.1_g000008 Rmu_sc0002862.1_g000001 Rmu_sc0002862.1_g000002 Rmu_sc0008652.1_g000002 Rmu_sc0011789.1_g000002 Rmu_sc0013252.1_g000001 Rmu_sc0017256.1_g000001 Rmu_sc0017907.1_g000002 Rmu_sc0017907.1_g000003 Rmu_sc0018737.1_g000003 Rmu_sc0020536.1_g000001 Rmu_sc0025127.1_g000001 Rmu_sc0028608.1_g000001 Rmu_sc0029703.1_g000001 Rmu_ssc0000027.1_g000015
rosa_roxburghii	Rroxscaffold_1G00055450
rosa_rugosa	Rorug03G0326300 Rorug05G0079400 Rorug05G0352300
rosa_samantha	Rh5AG167200 Rh5AG169300 Rh5BG166700 Rh5CG181100 Rh5CG182300 Rh5DG168600 Rh6BG409700
rosa_wichuraiana	Rw0G001580 Rw0G004990 Rw1G017410 Rw2G027840 Rw4G002740 Rw5G015190 Rw5G015310 Rw7G033830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	476, 724
AatII	GACGTC	1 cut(s)	75
Acc65I	GGTACC	1 cut(s)	651
AccB1I	GGYRCC	3 cut(s)	377, 410, 651
AccBSI	CCGCTC	1 cut(s)	640
AccII	CGCG	2 cut(s)	303, 450
AclWI	GGATC	3 cut(s)	279, 650, 1193
AcoI	YGGCCR	2 cut(s)	204, 216
AcsI	RAATTY	2 cut(s)	898, 1062
AcuI	CTGAAG	1 cut(s)	1289
AcyI	GRCGYC	4 cut(s)	72, 111, 378, 411
AdeI	CACNNNGTG	1 cut(s)	1034
AfaI	GTAC	7 cut(s)	653, 830, 845, 958, 1144, 1329, 1334
AfiI	CCNNNNNNNGG	7 cut(s)	454, 540, 580, 661, 662, 984, 1204
AflII	CTTAAG	1 cut(s)	1405
AgsI	TTSAA	4 cut(s)	43, 1217, 1321, 1501
AhdI	GACNNNNNGTC	2 cut(s)	885, 1082
AjiI	CACGTC	2 cut(s)	580, 634
AjnI	CCWGG	3 cut(s)	45, 267, 1153
Alw21I	GWGCWC	1 cut(s)	533
Alw26I	GTCTC	3 cut(s)	172, 214, 336
AlwI	GGATC	3 cut(s)	279, 650, 1193
AoxI	GGCC	7 cut(s)	204, 216, 270, 294, 571, 680, 1149
ApaI	GGGCCC	1 cut(s)	684
ApeKI	GCWGC	1 cut(s)	504
ApoI	RAATTY	2 cut(s)	898, 1062
ArsI	GACNNNNNNTTYG	2 cut(s)	350, 382
Asp700I	GAANNNNTTC	1 cut(s)	1483
Asp718I	GGTACC	1 cut(s)	651
AspLEI	GCGC	5 cut(s)	380, 413, 895, 977, 1376
AspS9I	GGNCC	5 cut(s)	295, 571, 680, 681, 1150
AsuC2I	CCSGG	1 cut(s)	339
AsuHPI	GGTGA	7 cut(s)	181, 391, 469, 604, 766, 889, 1360
BaeGI	GKGCMC	1 cut(s)	684
BanI	GGYRCC	3 cut(s)	377, 410, 651
BanII	GRGCYC	3 cut(s)	533, 684, 1211
BbsI	GAAGAC	2 cut(s)	21, 319
Bbv12I	GWGCWC	1 cut(s)	533
BbvI	GCAGC	1 cut(s)	491
BccI	CCATC	5 cut(s)	164, 914, 931, 1049, 1114
BceAI	ACGGC	7 cut(s)	34, 98, 191, 391, 508, 558, 962
BciT130I	CCWGG	3 cut(s)	47, 269, 1155
BclI	TGATCA	2 cut(s)	822, 1237
BcnI	CCSGG	1 cut(s)	339
BcoDI	GTCTC	3 cut(s)	172, 214, 336
BfaI	CTAG	1 cut(s)	1427
BfmI	CTRYAG	1 cut(s)	1385
BfoI	RGCGCY	3 cut(s)	381, 414, 1377
BfrI	CTTAAG	1 cut(s)	1405
BglI	GCCNNNNNGGC	1 cut(s)	1157
BglII	AGATCT	1 cut(s)	1366
BmcAI	AGTACT	1 cut(s)	1144
Bme1390I	CCNGG	4 cut(s)	47, 269, 339, 1155
BmeRI	GACNNNNNGTC	2 cut(s)	885, 1082
BmgBI	CACGTC	2 cut(s)	580, 634
BmgT120I	GGNCC	5 cut(s)	295, 571, 680, 681, 1150
BmiI	GGNNCC	6 cut(s)	379, 412, 653, 682, 949, 1152
BmrFI	CCNGG	4 cut(s)	47, 269, 339, 1155
BmsI	GCATC	4 cut(s)	240, 246, 357, 1025
BpiI	GAAGAC	2 cut(s)	21, 319
BpuEI	CTTGAG	1 cut(s)	948
BpuMI	CCSGG	1 cut(s)	339
BsaAI	YACGTR	1 cut(s)	439
BsaHI	GRCGYC	4 cut(s)	72, 111, 378, 411
BsaI	GGTCTC	1 cut(s)	336
BsaXI	ACNNNNNCTCC	2 cut(s)	8, 38
Bsc4I	CCNNNNNNNGG	7 cut(s)	454, 540, 580, 661, 662, 984, 1204
Bse3DI	GCAATG	1 cut(s)	1047
BseBI	CCWGG	3 cut(s)	47, 269, 1155
BseGI	GGATG	5 cut(s)	156, 237, 348, 862, 942
BseLI	CCNNNNNNNGG	7 cut(s)	454, 540, 580, 661, 662, 984, 1204
BseMI	GCAATG	1 cut(s)	1047
BseMII	CTCAG	2 cut(s)	861, 1137
BseRI	GAGGAG	5 cut(s)	16, 110, 160, 302, 566
BseSI	GKGCMC	1 cut(s)	684
BseXI	GCAGC	1 cut(s)	491
BseYI	CCCAGC	2 cut(s)	416, 761
BsgI	GTGCAG	1 cut(s)	1314
Bsh1236I	CGCG	2 cut(s)	303, 450
Bsh1285I	CGRYCG	1 cut(s)	34
BshFI	GGCC	7 cut(s)	206, 218, 272, 296, 573, 682, 1151
BshNI	GGYRCC	3 cut(s)	377, 410, 651
BsiEI	CGRYCG	1 cut(s)	34
BsiHKAI	GWGCWC	1 cut(s)	533
BsiSI	CCGG	3 cut(s)	339, 408, 1183
BslFI	GGGAC	6 cut(s)	181, 290, 319, 611, 730, 1002
BslI	CCNNNNNNNGG	7 cut(s)	454, 540, 580, 661, 662, 984, 1204
BsmAI	GTCTC	3 cut(s)	172, 214, 336
BsmBI	CGTCTC	2 cut(s)	172, 214
BsmFI	GGGAC	6 cut(s)	181, 290, 319, 611, 730, 1002
BsnI	GGCC	7 cut(s)	206, 218, 272, 296, 573, 682, 1151
Bso31I	GGTCTC	1 cut(s)	336
Bsp120I	GGGCCC	1 cut(s)	680
Bsp1286I	GDGCHC	3 cut(s)	533, 684, 1211
Bsp143I	GATC	7 cut(s)	284, 642, 822, 1185, 1237, 1366, 1409
Bsp19I	CCATGG	3 cut(s)	177, 213, 276
BspANI	GGCC	7 cut(s)	206, 218, 272, 296, 573, 682, 1151
BspCNI	CTCAG	2 cut(s)	860, 1138
BspFNI	CGCG	2 cut(s)	303, 450
BspHI	TCATGA	2 cut(s)	1116, 1396
BspLI	GGNNCC	6 cut(s)	379, 412, 653, 682, 949, 1152
BspMAI	CTGCAG	1 cut(s)	1389
BspPI	GGATC	3 cut(s)	279, 650, 1193
BspT107I	GGYRCC	3 cut(s)	377, 410, 651
BspTI	CTTAAG	1 cut(s)	1405
BspTNI	GGTCTC	1 cut(s)	336
BsrBI	CCGCTC	1 cut(s)	640
BsrDI	GCAATG	1 cut(s)	1047
BssMI	GATC	7 cut(s)	284, 642, 822, 1185, 1237, 1366, 1409
BssNI	GRCGYC	4 cut(s)	72, 111, 378, 411
BssT1I	CCWWGG	4 cut(s)	177, 213, 276, 1099
Bst2UI	CCWGG	3 cut(s)	47, 269, 1155
Bst4CI	ACNGT	5 cut(s)	187, 592, 883, 1114, 1332
Bst6I	CTCTTC	1 cut(s)	44
BstACI	GRCGYC	4 cut(s)	72, 111, 378, 411
BstAFI	CTTAAG	1 cut(s)	1405
BstAPI	GCANNNNNTGC	1 cut(s)	1022
BstBAI	YACGTR	1 cut(s)	439
BstC8I	GCNNGC	5 cut(s)	298, 445, 465, 1040, 1344
BstDEI	CTNAG	3 cut(s)	847, 1132, 1146
BstDSI	CCRYGG	5 cut(s)	177, 213, 276, 373, 524
BstF5I	GGATG	5 cut(s)	156, 237, 348, 862, 942
BstFNI	CGCG	2 cut(s)	303, 450
BstH2I	RGCGCY	3 cut(s)	381, 414, 1377
BstHHI	GCGC	5 cut(s)	380, 413, 895, 977, 1376
BstKTI	GATC	7 cut(s)	287, 645, 825, 1188, 1240, 1369, 1412
BstMAI	GTCTC	3 cut(s)	172, 214, 336
BstMBI	GATC	7 cut(s)	284, 642, 822, 1185, 1237, 1366, 1409
BstMCI	CGRYCG	1 cut(s)	34
BstMWI	GCNNNNNNNGC	4 cut(s)	234, 417, 1022, 1157
BstNI	CCWGG	3 cut(s)	47, 269, 1155
BstSCI	CCNGG	4 cut(s)	45, 267, 337, 1153
BstSFI	CTRYAG	1 cut(s)	1385
BstSLI	GKGCMC	1 cut(s)	684
BstUI	CGCG	2 cut(s)	303, 450
BstV1I	GCAGC	1 cut(s)	491
BstV2I	GAAGAC	2 cut(s)	21, 319
BstX2I	RGATCY	2 cut(s)	284, 1366
BstXI	CCANNNNNNTGG	1 cut(s)	430
BstYI	RGATCY	2 cut(s)	284, 1366
BsuRI	GGCC	7 cut(s)	206, 218, 272, 296, 573, 682, 1151
BtgI	CCRYGG	5 cut(s)	177, 213, 276, 373, 524
BtgZI	GCGATG	1 cut(s)	1235
BtrI	CACGTC	2 cut(s)	580, 634
BtsCI	GGATG	5 cut(s)	156, 237, 348, 862, 942
Cac8I	GCNNGC	5 cut(s)	298, 445, 465, 1040, 1344
CciI	TCATGA	2 cut(s)	1116, 1396
CfoI	GCGC	5 cut(s)	380, 413, 895, 977, 1376
Cfr13I	GGNCC	5 cut(s)	295, 571, 680, 681, 1150
CseI	GACGC	3 cut(s)	119, 154, 292
Csp6I	GTAC	7 cut(s)	652, 829, 844, 957, 1143, 1328, 1333
CviQI	GTAC	7 cut(s)	652, 829, 844, 957, 1143, 1328, 1333
DdeI	CTNAG	3 cut(s)	847, 1132, 1146
DinI	GGCGCC	2 cut(s)	379, 412
DpnI	GATC	7 cut(s)	286, 644, 824, 1187, 1239, 1368, 1411
DpnII	GATC	7 cut(s)	284, 642, 822, 1185, 1237, 1366, 1409
DraIII	CACNNNGTG	1 cut(s)	1034
DrdI	GACNNNNNNGTC	2 cut(s)	476, 724
DriI	GACNNNNNGTC	2 cut(s)	885, 1082
DseDI	GACNNNNNNGTC	2 cut(s)	476, 724
EaeI	YGGCCR	2 cut(s)	204, 216
Eam1104I	CTCTTC	1 cut(s)	44
Eam1105I	GACNNNNNGTC	2 cut(s)	885, 1082
EarI	CTCTTC	1 cut(s)	44
EciI	GGCGGA	3 cut(s)	307, 482, 578
Ecl136II	GAGCTC	1 cut(s)	531
Eco130I	CCWWGG	4 cut(s)	177, 213, 276, 1099
Eco24I	GRGCYC	3 cut(s)	533, 684, 1211
Eco31I	GGTCTC	1 cut(s)	336
Eco53kI	GAGCTC	1 cut(s)	531
Eco57I	CTGAAG	1 cut(s)	1289
EcoICRI	GAGCTC	1 cut(s)	531
EcoO109I	RGGNCCY	1 cut(s)	1150
EcoRII	CCWGG	3 cut(s)	45, 267, 1153
EcoT14I	CCWWGG	4 cut(s)	177, 213, 276, 1099
EcoT38I	GRGCYC	3 cut(s)	533, 684, 1211
EgeI	GGCGCC	2 cut(s)	379, 412
EheI	GGCGCC	2 cut(s)	379, 412
ErhI	CCWWGG	4 cut(s)	177, 213, 276, 1099
Esp3I	CGTCTC	2 cut(s)	172, 214
FaqI	GGGAC	6 cut(s)	181, 290, 319, 611, 730, 1002
FauI	CCCGC	3 cut(s)	146, 206, 305
FauNDI	CATATG	1 cut(s)	1493
FbaI	TGATCA	2 cut(s)	822, 1237
FokI	GGATG	5 cut(s)	143, 224, 335, 869, 949
FriOI	GRGCYC	3 cut(s)	533, 684, 1211
FspBI	CTAG	1 cut(s)	1427
GlaI	GCGC	5 cut(s)	379, 412, 894, 976, 1375
GsaI	CCCAGC	2 cut(s)	420, 765
HaeII	RGCGCY	3 cut(s)	381, 414, 1377
HaeIII	GGCC	7 cut(s)	206, 218, 272, 296, 573, 682, 1151
HapII	CCGG	3 cut(s)	339, 408, 1183
HgaI	GACGC	3 cut(s)	119, 154, 292
HhaI	GCGC	5 cut(s)	380, 413, 895, 977, 1376
Hin1I	GRCGYC	4 cut(s)	72, 111, 378, 411
Hin6I	GCGC	5 cut(s)	378, 411, 893, 975, 1374
HinP1I	GCGC	5 cut(s)	378, 411, 893, 975, 1374
HindIII	AAGCTT	1 cut(s)	425
HinfI	GANTC	8 cut(s)	194, 404, 725, 886, 904, 1168, 1479, 1501
HpaII	CCGG	3 cut(s)	339, 408, 1183
HphI	GGTGA	7 cut(s)	181, 391, 469, 604, 766, 889, 1360
Hpy166II	GTNNAC	3 cut(s)	613, 1006, 1335
Hpy188I	TCNGA	8 cut(s)	31, 265, 284, 535, 730, 813, 850, 1173
Hpy188III	TCNNGA	6 cut(s)	481, 965, 1074, 1117, 1214, 1397
Hpy8I	GTNNAC	3 cut(s)	613, 1006, 1335
Hpy99I	CGWCG	6 cut(s)	113, 362, 365, 592, 605, 689
HpyAV	CCTTC	3 cut(s)	562, 622, 751
HpyCH4III	ACNGT	5 cut(s)	187, 592, 883, 1114, 1332
HpyCH4IV	ACGT	7 cut(s)	72, 363, 390, 438, 579, 615, 633
HpyCH4V	TGCA	7 cut(s)	507, 1016, 1277, 1295, 1301, 1342, 1387
HpyF10VI	GCNNNNNNNGC	4 cut(s)	234, 417, 1022, 1157
HpyF3I	CTNAG	3 cut(s)	847, 1132, 1146
HpySE526I	ACGT	7 cut(s)	72, 363, 390, 438, 579, 615, 633
Hsp92I	GRCGYC	4 cut(s)	72, 111, 378, 411
HspAI	GCGC	5 cut(s)	378, 411, 893, 975, 1374
KasI	GGCGCC	2 cut(s)	377, 410
KpnI	GGTACC	1 cut(s)	655
Ksp22I	TGATCA	2 cut(s)	822, 1237
Kzo9I	GATC	7 cut(s)	284, 642, 822, 1185, 1237, 1366, 1409
LmnI	GCTCC	6 cut(s)	425, 528, 536, 637, 953, 1125
Lsp1109I	GCAGC	1 cut(s)	491
LweI	GCATC	4 cut(s)	240, 246, 357, 1025
MaeI	CTAG	1 cut(s)	1427
MaeII	ACGT	7 cut(s)	72, 363, 390, 438, 579, 615, 633
MaeIII	GTNAC	4 cut(s)	187, 397, 575, 877
MalI	GATC	7 cut(s)	286, 644, 824, 1187, 1239, 1368, 1411
MbiI	CCGCTC	1 cut(s)	640
MboI	GATC	7 cut(s)	284, 642, 822, 1185, 1237, 1366, 1409
MboII	GAAGA	8 cut(s)	26, 31, 70, 319, 556, 637, 1282, 1371
MflI	RGATCY	2 cut(s)	284, 1366
MhlI	GDGCHC	3 cut(s)	533, 684, 1211
MluCI	AATT	4 cut(s)	898, 1062, 1069, 1508
Mly113I	GGCGCC	2 cut(s)	378, 411
MlyI	GAGTC	4 cut(s)	203, 413, 734, 895
MmeI	TCCRAC	4 cut(s)	54, 288, 708, 762
MroXI	GAANNNNTTC	1 cut(s)	1483
MseI	TTAA	4 cut(s)	834, 1094, 1406, 1421
MslI	CAYNNNNRTG	1 cut(s)	249
MspA1I	CMGCKG	1 cut(s)	504
MspCI	CTTAAG	1 cut(s)	1405
MspI	CCGG	3 cut(s)	339, 408, 1183
MspR9I	CCNGG	4 cut(s)	47, 269, 339, 1155
MvaI	CCWGG	3 cut(s)	47, 269, 1155
MvnI	CGCG	2 cut(s)	303, 450
MwoI	GCNNNNNNNGC	4 cut(s)	234, 417, 1022, 1157
NarI	GGCGCC	2 cut(s)	378, 411
NciI	CCSGG	1 cut(s)	339
NcoI	CCATGG	3 cut(s)	177, 213, 276
NdeI	CATATG	1 cut(s)	1493
NdeII	GATC	7 cut(s)	284, 642, 822, 1185, 1237, 1366, 1409
NlaIV	GGNNCC	6 cut(s)	379, 412, 653, 682, 949, 1152
NmeAIII	GCCGAG	2 cut(s)	204, 1350
NmuCI	GTSAC	4 cut(s)	187, 397, 575, 877
PagI	TCATGA	2 cut(s)	1116, 1396
PasI	CCCWGGG	1 cut(s)	1154
PcsI	WCGNNNNNNNCGW	1 cut(s)	366
PdmI	GAANNNNTTC	1 cut(s)	1483
PfeI	GAWTC	4 cut(s)	904, 1168, 1479, 1501
PflFI	GACNNNGTC	2 cut(s)	113, 185
PleI	GAGTC	4 cut(s)	202, 412, 733, 894
PluTI	GGCGCC	2 cut(s)	381, 414
PpsI	GAGTC	4 cut(s)	202, 412, 733, 894
Ppu21I	YACGTR	1 cut(s)	439
Psp124BI	GAGCTC	1 cut(s)	533
Psp6I	CCWGG	3 cut(s)	45, 267, 1153
PspFI	CCCAGC	2 cut(s)	416, 761
PspGI	CCWGG	3 cut(s)	45, 267, 1153
PspN4I	GGNNCC	6 cut(s)	379, 412, 653, 682, 949, 1152
PspOMI	GGGCCC	1 cut(s)	680
PspPI	GGNCC	5 cut(s)	295, 571, 680, 681, 1150
PstI	CTGCAG	1 cut(s)	1389
PsuI	RGATCY	2 cut(s)	284, 1366
PsyI	GACNNNGTC	2 cut(s)	113, 185
PvuII	CAGCTG	1 cut(s)	504
RsaI	GTAC	7 cut(s)	653, 830, 845, 958, 1144, 1329, 1334
RsaNI	GTAC	7 cut(s)	652, 829, 844, 957, 1143, 1328, 1333
RseI	CAYNNNNRTG	1 cut(s)	249
SacI	GAGCTC	1 cut(s)	533
SaqAI	TTAA	4 cut(s)	834, 1094, 1406, 1421
Sau3AI	GATC	7 cut(s)	284, 642, 822, 1185, 1237, 1366, 1409
Sau96I	GGNCC	5 cut(s)	295, 571, 680, 681, 1150
ScaI	AGTACT	1 cut(s)	1144
SchI	GAGTC	4 cut(s)	203, 413, 734, 895
ScrFI	CCNGG	4 cut(s)	47, 269, 339, 1155
SduI	GDGCHC	3 cut(s)	533, 684, 1211
SfaNI	GCATC	4 cut(s)	240, 246, 357, 1025
SfcI	CTRYAG	1 cut(s)	1385
SfoI	GGCGCC	2 cut(s)	379, 412
SmiMI	CAYNNNNRTG	1 cut(s)	249
SmlI	CTYRAG	2 cut(s)	963, 1405
SmoI	CTYRAG	2 cut(s)	963, 1405
Sse9I	AATT	4 cut(s)	898, 1062, 1069, 1508
SspDI	GGCGCC	2 cut(s)	377, 410
SspMI	CTAG	1 cut(s)	1427
SstI	GAGCTC	1 cut(s)	533
StyD4I	CCNGG	4 cut(s)	45, 267, 337, 1153
StyI	CCWWGG	4 cut(s)	177, 213, 276, 1099
TaaI	ACNGT	5 cut(s)	187, 592, 883, 1114, 1332
TaiI	ACGT	7 cut(s)	75, 366, 393, 441, 582, 618, 636
TaqI	TCGA	3 cut(s)	12, 96, 369
TasI	AATT	4 cut(s)	898, 1062, 1069, 1508
TatI	WGTACW	4 cut(s)	828, 843, 956, 1142
TauI	GCSGC	9 cut(s)	144, 221, 231, 257, 275, 303, 450, 587, 710
TfiI	GAWTC	4 cut(s)	904, 1168, 1479, 1501
Tru1I	TTAA	4 cut(s)	834, 1094, 1406, 1421
Tru9I	TTAA	4 cut(s)	834, 1094, 1406, 1421
TseFI	GTSAC	4 cut(s)	187, 397, 575, 877
TseI	GCWGC	1 cut(s)	504
Tsp45I	GTSAC	4 cut(s)	187, 397, 575, 877
TspDTI	ATGAA	2 cut(s)	319, 547
TspGWI	ACGGA	1 cut(s)	277
Tth111I	GACNNNGTC	2 cut(s)	113, 185
Vha464I	CTTAAG	1 cut(s)	1405
XapI	RAATTY	2 cut(s)	898, 1062
XmnI	GAANNNNTTC	1 cut(s)	1483
XspI	CTAG	1 cut(s)	1427
ZraI	GACGTC	1 cut(s)	73
ZrmI	AGTACT	1 cut(s)	1144

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.