Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001890.1

Orthogroup ID

OG0001225

Physical Location & Seq

Genomic Coordinates Reverse (-)

94404 .. 99425

Gene Structure 5022 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001890.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

atgcaagccagctccttccaagtcattcccaaaccaatatttccctcaccgataaacatacctccggtgcaccgacgtcctccctcgcaacgagttcgtgccatcactacttccacagccaatgaaacccatagttctactccaattaccatgtcaactctagaagtggtcgatgcctccgtggccgcattctgggactaccagttcctcttcgtctcgcaacgctcggaaacaaacgagcccgtgactctacaagtcgtcgaaggtgcggtcccgacagagtttccttccggaacatactacttggtgggaccggggatcttcagggatgaccacggttcgacaatgcaccatttcgacggtcacggctacctcagggcttttactttcgatgggctaaatggggataagttcagtgtcaagttcatggcgaggtacgtgaatactgaggcaaaggtggaagagcacgacccggtgaccaacacatggcggttccgacatagggggttgttctcgatgctgaagagaggagataaagtttggaacaccaaggtgatgaaaaacgtggcgaatactagtgtgttgagctggggtgggaggctgttgtgcttgtgggaaggcggggaaccatacgaaattgaaccggagaggttggatacgatcgggaaggtcaagctgatggatggttgggattcagtggtggagaggagaagcgatggtggtgatgtatgggatgttgcagcaaggttgctgacgccaattttgtacgaatttgattcaaattttaaggtggttggaaagaaagaattcagcatccctgatcacttgatgattcaagattgggctttcacagccactagttatatactatttgctaatcgtgtcaagcttgacgttaccggtgcaatgacttcattttgtggaatgactccaacaattgcagcattatcagtgaaccatagcaaggaaacttctcccatatatgtgcttcctcggtttcctgatgaagtgaattataatcgagattggagagtgcctgttgaagctccttcacaattttggctgctacatgtaggcaatgcctggctcaatctttcaactaaatctgtgcgcacatggtctgctgatagtcgaagatttatcggcgaacccactttcatagccaaaggttccgaagaagatgagggttacattcttgtagttgagtatgcagttgcagttcaaaggtgctatctggttatcttggattcaaagaggattggagcggctgatgcacttgtggcaagacttgaagtccccaaacacctaaattttcctcttggttttcatggtttctgggccaaagcttcgagcttccttgacccaaaagaggcgtcgtcgacctggaaggaagatcggaccggaacttcatcctccggccacttccaactggcacaccggcaccatcttcttcttttcaatgtcaccatcacacctgaggttgtagttggtccgatcgtcgatcgtggaagaagaatcgaatgcggaaagcttttgcagctccagcaattcttcgtctttttctcgcgactccagccactgtttagggtgtttgtagtatcgaaactcatcctcttatcccgctacacgtctgtgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001763 GO:0003674 GO:0003824 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008300 GO:0008610 GO:0009056 GO:0009058 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009987 GO:0010016 GO:0010033 GO:0010223 GO:0010346 GO:0010436 GO:0010817 GO:0016042 GO:0016106 GO:0016114 GO:0016119 GO:0016121 GO:0016491 GO:0016701 GO:0016702 GO:0018130 GO:0032501 GO:0032502 GO:0042214 GO:0042221 GO:0042445 GO:0042446 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0045549 GO:0046247 GO:0046483 GO:0048367 GO:0048646 GO:0048731 GO:0048856 GO:0050896 GO:0051213 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:1901334 GO:1901336 GO:1901360 GO:1901362 GO:1901575 GO:1901576 GO:1901600 GO:1901601 GO:1905393

KEGG Pathways

Metabolic & Signaling

ko00906 map00906

Pfam Domains

Protein Families

RPE65

Protein Analysis

545

Amino Acids

61.69

Weight (kDa)

7.76

Isoelectric Point (pI)

37.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001225)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44990 AT2G44990 AT2G44990
fragaria_vesca	FvH4_7g10450
malus_domestica	MD07G1110600.v1.1
prunus_persica	Prupe.2G133900_v2.0.a1
pyrus_communis	pycom07g09530
rosa_chinensis	RchiOBHm_Chr1g0342921 RchiOBHm_Chr1g0342931 RchiOBHm_Chr1g0348141 RchiOBHm_Chr1g0348171 RchiOBHm_Chr1g0348201 RchiOBHm_Chr2g0136091 RchiOBHm_Chr7g0229961
rosa_laevigata	RLG00000028678 RLG00000028682 RLG00000028684 RLG00000028685 RLG00000028686
rosa_multiflora	Rmu_co8414565.1_g000001 Rmu_co8499605.1_g000001 Rmu_sc0001563.1_g000031 Rmu_sc0001890.1_g000013 Rmu_sc0001890.1_g000015 Rmu_sc0002209.1_g000017 Rmu_sc0003991.1_g000009 Rmu_sc0004502.1_g000011 Rmu_sc0004502.1_g000018 Rmu_sc0005046.1_g000018
rosa_roxburghii	Rroxscaffold_4G00307110 Rroxscaffold_4G00307160 Rroxscaffold_4G00307170 Rroxscaffold_4G00307180
rosa_rugosa	Rorug01G0145700.1 Rorug01G0192700 Rorug01G0192900 Rorug01G0193500
rosa_samantha	Rh1AG095900 Rh1AG210700 Rh1AG210800 Rh1BG176200 Rh1BG176800 Rh1BG177100 Rh1BG177200 Rh1CG195000 Rh1CG195100 Rh1DG205900 Rh1DG206300 Rh1DG206600 Rh1DG206700 Rh3DG305500
rosa_wichuraiana	Rw0G011410 Rw1G017570 Rw1G017580 Rw1G017590 Rw1G017800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1017
AatII	GACGTC	1 cut(s)	79
Acc16I	TGCGCA	1 cut(s)	1112
AccB1I	GGYRCC	1 cut(s)	1440
AccB7I	CCANNNNNTGG	1 cut(s)	486
AccBSI	CCGCTC	1 cut(s)	1265
AccI	GTMKAC	1 cut(s)	1379
AccII	CGCG	1 cut(s)	1567
AccIII	TCCGGA	1 cut(s)	290
AciI	CCGC	7 cut(s)	186, 269, 490, 621, 1265, 1524, 1621
AclWI	GGATC	1 cut(s)	326
AcoI	YGGCCR	2 cut(s)	183, 1417
AcsI	RAATTY	4 cut(s)	770, 781, 806, 1309
AcuI	CTGAAG	2 cut(s)	307, 542
AcyI	GRCGYC	3 cut(s)	76, 755, 1373
AfaI	GTAC	2 cut(s)	437, 767
AfiI	CCNNNNNNNGG	5 cut(s)	192, 486, 502, 964, 1369
AflIII	ACRYGT	2 cut(s)	1069, 1626
AgeI	ACCGGT	1 cut(s)	899
AgsI	TTSAA	9 cut(s)	641, 780, 836, 1043, 1098, 1223, 1251, 1292, 1459
AhdI	GACNNNNNGTC	1 cut(s)	1292
AhlI	ACTAGT	2 cut(s)	575, 857
AjiI	CACGTC	1 cut(s)	1629
AjnI	CCWGG	2 cut(s)	1082, 1382
AleI	CACNNNNGTG	2 cut(s)	551, 1631
AloI	GAACNNNNNNTCC	2 cut(s)	188, 220
AluBI	AGCT	9 cut(s)	12, 588, 676, 889, 1046, 1346, 1353, 1531, 1540
AluI	AGCT	9 cut(s)	12, 588, 676, 889, 1046, 1346, 1353, 1531, 1540
Alw21I	GWGCWC	2 cut(s)	72, 468
Alw26I	GTCTC	1 cut(s)	220
Alw44I	GTGCAC	1 cut(s)	68
AlwI	GGATC	1 cut(s)	326
AlwNI	CAGNNNCTG	1 cut(s)	1579
Aor13HI	TCCGGA	1 cut(s)	290
AoxI	GGCC	3 cut(s)	183, 1338, 1417
ApaLI	GTGCAC	1 cut(s)	68
ApeKI	GCWGC	4 cut(s)	740, 941, 1063, 1537
ApoI	RAATTY	4 cut(s)	770, 781, 806, 1309
ArsI	GACNNNNNNTTYG	6 cut(s)	255, 287, 745, 777, 1358, 1390
AsiGI	ACCGGT	1 cut(s)	899
Asp700I	GAANNNNTTC	1 cut(s)	806
AspLEI	GCGC	1 cut(s)	1113
AspS9I	GGNCC	5 cut(s)	271, 311, 1338, 1398, 1490
AsuC2I	CCSGG	2 cut(s)	315, 473
AsuHPI	GGTGA	5 cut(s)	39, 487, 565, 734, 1456
AvaII	GGWCC	4 cut(s)	271, 311, 1398, 1490
AxyI	CCTNAGG	2 cut(s)	374, 1476
BaeGI	GKGCMC	1 cut(s)	72
BanI	GGYRCC	1 cut(s)	1440
BanII	GRGCYC	1 cut(s)	243
Bbv12I	GWGCWC	2 cut(s)	72, 468
BbvI	GCAGC	4 cut(s)	752, 953, 1050, 1549
BccI	CCATC	7 cut(s)	110, 386, 673, 677, 710, 1452, 1475
BceAI	ACGGC	1 cut(s)	382
BcgI	CGANNNNNNTGC	2 cut(s)	77, 111
BciT130I	CCWGG	2 cut(s)	1084, 1384
BciVI	GTATCC	1 cut(s)	649
BclI	TGATCA	1 cut(s)	820
BcnI	CCSGG	2 cut(s)	315, 473
BcoDI	GTCTC	1 cut(s)	220
BcuI	ACTAGT	2 cut(s)	575, 857
BfaI	CTAG	3 cut(s)	161, 576, 858
BfuI	GTATCC	1 cut(s)	649
BglI	GCCNNNNNGGC	1 cut(s)	182
BisI	GCNGC	6 cut(s)	186, 741, 942, 1064, 1266, 1538
BlsI	GCNGC	6 cut(s)	187, 742, 943, 1065, 1267, 1539
Bme1390I	CCNGG	4 cut(s)	315, 473, 1084, 1384
Bme18I	GGWCC	4 cut(s)	271, 311, 1398, 1490
BmeRI	GACNNNNNGTC	1 cut(s)	1292
BmgBI	CACGTC	1 cut(s)	1629
BmgT120I	GGNCC	5 cut(s)	271, 311, 1338, 1398, 1490
BmiI	GGNNCC	6 cut(s)	273, 312, 494, 627, 1171, 1442
BmrFI	CCNGG	4 cut(s)	315, 473, 1084, 1384
BmsI	GCATC	4 cut(s)	163, 507, 822, 1261
BpmI	CTGGAG	2 cut(s)	1526, 1556
BpuMI	CCSGG	2 cut(s)	315, 473
BsaAI	YACGTR	1 cut(s)	439
BsaHI	GRCGYC	3 cut(s)	76, 755, 1373
BsaJI	CCNNGG	5 cut(s)	180, 314, 334, 549, 992
BsaWI	WCCGGW	5 cut(s)	64, 290, 643, 899, 1400
BsaXI	ACNNNNNCTCC	2 cut(s)	522, 552
Bsc4I	CCNNNNNNNGG	5 cut(s)	192, 486, 502, 964, 1369
Bse118I	RCCGGY	2 cut(s)	899, 1437
Bse1I	ACTGG	2 cut(s)	202, 1434
Bse21I	CCTNAGG	2 cut(s)	374, 1476
Bse3DI	GCAATG	2 cut(s)	912, 1084
BseAI	TCCGGA	1 cut(s)	290
BseBI	CCWGG	2 cut(s)	1084, 1384
BseDI	CCNNGG	5 cut(s)	180, 314, 334, 549, 992
BseGI	GGATG	6 cut(s)	334, 688, 739, 813, 1409, 1608
BseLI	CCNNNNNNNGG	5 cut(s)	192, 486, 502, 964, 1369
BseMI	GCAATG	2 cut(s)	912, 1084
BseMII	CTCAG	3 cut(s)	388, 438, 1467
BseNI	ACTGG	2 cut(s)	202, 1434
BseRI	GAGGAG	2 cut(s)	543, 721
BseSI	GKGCMC	1 cut(s)	72
BseXI	GCAGC	4 cut(s)	752, 953, 1050, 1549
BseYI	CCCAGC	1 cut(s)	588
Bsh1236I	CGCG	1 cut(s)	1567
Bsh1285I	CGRYCG	3 cut(s)	663, 1497, 1504
BshFI	GGCC	3 cut(s)	185, 1340, 1419
BshNI	GGYRCC	1 cut(s)	1440
BshTI	ACCGGT	1 cut(s)	899
BsiEI	CGRYCG	3 cut(s)	663, 1497, 1504
BsiHKAI	GWGCWC	2 cut(s)	72, 468
BsiSI	CCGG	9 cut(s)	65, 291, 314, 473, 644, 900, 1401, 1416, 1438
BslFI	GGGAC	4 cut(s)	209, 257, 324, 1280
BslI	CCNNNNNNNGG	5 cut(s)	192, 486, 502, 964, 1369
BsmAI	GTCTC	1 cut(s)	220
BsmBI	CGTCTC	1 cut(s)	220
BsmFI	GGGAC	4 cut(s)	209, 257, 324, 1280
BsmI	GAATGC	2 cut(s)	188, 1526
BsnI	GGCC	3 cut(s)	185, 1340, 1419
Bsp1286I	GDGCHC	3 cut(s)	72, 243, 468
Bsp13I	TCCGGA	1 cut(s)	290
Bsp143I	GATC	6 cut(s)	318, 660, 820, 1393, 1494, 1501
Bsp68I	TCGCGA	1 cut(s)	1567
BspACI	CCGC	7 cut(s)	186, 269, 490, 621, 1265, 1524, 1621
BspANI	GGCC	3 cut(s)	185, 1340, 1419
BspCNI	CTCAG	3 cut(s)	387, 439, 1468
BspEI	TCCGGA	1 cut(s)	290
BspFNI	CGCG	1 cut(s)	1567
BspLI	GGNNCC	6 cut(s)	273, 312, 494, 627, 1171, 1442
BspPI	GGATC	1 cut(s)	326
BspQI	GCTCTTC	1 cut(s)	456
BspT107I	GGYRCC	1 cut(s)	1440
BsrBI	CCGCTC	1 cut(s)	1265
BsrDI	GCAATG	2 cut(s)	912, 1084
BsrFI	RCCGGY	2 cut(s)	899, 1437
BsrI	ACTGG	2 cut(s)	202, 1434
BssAI	RCCGGY	2 cut(s)	899, 1437
BssECI	CCNNGG	5 cut(s)	180, 314, 334, 549, 992
BssMI	GATC	6 cut(s)	318, 660, 820, 1393, 1494, 1501
BssNI	GRCGYC	3 cut(s)	76, 755, 1373
BssT1I	CCWWGG	1 cut(s)	549
Bst2UI	CCWGG	2 cut(s)	1084, 1384
Bst4CI	ACNGT	3 cut(s)	338, 362, 1581
Bst6I	CTCTTC	3 cut(s)	215, 456, 518
BstACI	GRCGYC	3 cut(s)	76, 755, 1373
BstBAI	YACGTR	1 cut(s)	439
BstC8I	GCNNGC	2 cut(s)	6, 10
BstDEI	CTNAG	3 cut(s)	374, 447, 1476
BstDSI	CCRYGG	2 cut(s)	180, 334
BstEII	GGTNACC	1 cut(s)	475
BstF5I	GGATG	6 cut(s)	334, 688, 739, 813, 1409, 1608
BstFNI	CGCG	1 cut(s)	1567
BstHHI	GCGC	1 cut(s)	1113
BstKTI	GATC	6 cut(s)	321, 663, 823, 1396, 1497, 1504
BstMAI	GTCTC	1 cut(s)	220
BstMBI	GATC	6 cut(s)	318, 660, 820, 1393, 1494, 1501
BstMCI	CGRYCG	3 cut(s)	663, 1497, 1504
BstMWI	GCNNNNNNNGC	7 cut(s)	182, 851, 1271, 1280, 1537, 1543, 1573
BstNI	CCWGG	2 cut(s)	1084, 1384
BstNSI	RCATGY	1 cut(s)	1073
BstPI	GGTNACC	1 cut(s)	475
BstSCI	CCNGG	4 cut(s)	313, 471, 1082, 1382
BstSLI	GKGCMC	1 cut(s)	72
BstUI	CGCG	1 cut(s)	1567
BstV1I	GCAGC	4 cut(s)	752, 953, 1050, 1549
BstX2I	RGATCY	1 cut(s)	318
BstYI	RGATCY	1 cut(s)	318
Bsu36I	CCTNAGG	2 cut(s)	374, 1476
BsuI	GTATCC	1 cut(s)	649
BsuRI	GGCC	3 cut(s)	185, 1340, 1419
BtgI	CCRYGG	2 cut(s)	180, 334
BtgZI	GCGATG	1 cut(s)	729
BtrI	CACGTC	1 cut(s)	1629
BtsCI	GGATG	6 cut(s)	334, 688, 739, 813, 1409, 1608
BtsIMutI	CAGTG	4 cut(s)	421, 702, 957, 1577
BtuMI	TCGCGA	1 cut(s)	1567
Cac8I	GCNNGC	2 cut(s)	6, 10
CaiI	CAGNNNCTG	1 cut(s)	1579
CfoI	GCGC	1 cut(s)	1113
Cfr10I	RCCGGY	2 cut(s)	899, 1437
Cfr13I	GGNCC	5 cut(s)	271, 311, 1338, 1398, 1490
CpoI	CGGWCCG	1 cut(s)	1398
CseI	GACGC	2 cut(s)	763, 1362
Csp6I	GTAC	2 cut(s)	436, 766
CspAI	ACCGGT	1 cut(s)	899
CspI	CGGWCCG	1 cut(s)	1398
CviAII	CATG	6 cut(s)	151, 427, 486, 1070, 1116, 1328
CviQI	GTAC	2 cut(s)	436, 766
DdeI	CTNAG	3 cut(s)	374, 447, 1476
DpnI	GATC	6 cut(s)	320, 662, 822, 1395, 1496, 1503
DpnII	GATC	6 cut(s)	318, 660, 820, 1393, 1494, 1501
DriI	GACNNNNNGTC	1 cut(s)	1292
EaeI	YGGCCR	2 cut(s)	183, 1417
Eam1104I	CTCTTC	3 cut(s)	215, 456, 518
Eam1105I	GACNNNNNGTC	1 cut(s)	1292
EarI	CTCTTC	3 cut(s)	215, 456, 518
Eco130I	CCWWGG	1 cut(s)	549
Eco24I	GRGCYC	1 cut(s)	243
Eco47I	GGWCC	4 cut(s)	271, 311, 1398, 1490
Eco57I	CTGAAG	2 cut(s)	307, 542
Eco81I	CCTNAGG	2 cut(s)	374, 1476
Eco91I	GGTNACC	1 cut(s)	475
EcoO65I	GGTNACC	1 cut(s)	475
EcoRI	GAATTC	1 cut(s)	806
EcoRII	CCWGG	2 cut(s)	1082, 1382
EcoT14I	CCWWGG	1 cut(s)	549
EcoT38I	GRGCYC	1 cut(s)	243
ErhI	CCWWGG	1 cut(s)	549
Esp3I	CGTCTC	1 cut(s)	220
FaeI	CATG	6 cut(s)	154, 430, 489, 1073, 1119, 1331
FaqI	GGGAC	4 cut(s)	209, 257, 324, 1280
FatI	CATG	6 cut(s)	150, 426, 485, 1069, 1115, 1327
FauI	CCCGC	2 cut(s)	614, 1628
FbaI	TGATCA	1 cut(s)	820
FblI	GTMKAC	1 cut(s)	1379
Fnu4HI	GCNGC	6 cut(s)	186, 741, 942, 1064, 1266, 1538
FokI	GGATG	6 cut(s)	341, 695, 746, 800, 1396, 1595
FriOI	GRGCYC	1 cut(s)	243
Fsp4HI	GCNGC	6 cut(s)	186, 741, 942, 1064, 1266, 1538
FspAI	RTGCGCAY	1 cut(s)	1112
FspBI	CTAG	3 cut(s)	161, 576, 858
FspI	TGCGCA	1 cut(s)	1112
GlaI	GCGC	1 cut(s)	1112
GluI	GCNGC	6 cut(s)	186, 741, 942, 1064, 1266, 1538
GsaI	CCCAGC	1 cut(s)	592
GsuI	CTGGAG	2 cut(s)	1526, 1556
HaeIII	GGCC	3 cut(s)	185, 1340, 1419
HapII	CCGG	9 cut(s)	65, 291, 314, 473, 644, 900, 1401, 1416, 1438
HgaI	GACGC	2 cut(s)	763, 1362
HhaI	GCGC	1 cut(s)	1113
Hin1I	GRCGYC	3 cut(s)	76, 755, 1373
Hin1II	CATG	6 cut(s)	154, 430, 489, 1073, 1119, 1331
Hin6I	GCGC	1 cut(s)	1111
HinP1I	GCGC	1 cut(s)	1111
HincII	GTYRAC	2 cut(s)	156, 1380
HindII	GTYRAC	2 cut(s)	156, 1380
HindIII	AAGCTT	3 cut(s)	887, 1344, 1529
HinfI	GANTC	8 cut(s)	247, 692, 776, 832, 928, 1247, 1515, 1569
HpaII	CCGG	9 cut(s)	65, 291, 314, 473, 644, 900, 1401, 1416, 1438
HphI	GGTGA	5 cut(s)	39, 487, 565, 734, 1456
Hpy166II	GTNNAC	4 cut(s)	70, 156, 955, 1380
Hpy188I	TCNGA	5 cut(s)	229, 497, 1174, 1398, 1494
Hpy188III	TCNNGA	9 cut(s)	161, 274, 291, 514, 664, 836, 1001, 1022, 1566
Hpy8I	GTNNAC	4 cut(s)	70, 156, 955, 1380
Hpy99I	CGWCG	6 cut(s)	78, 263, 362, 1378, 1381, 1502
HpyAV	CCTTC	7 cut(s)	25, 257, 297, 611, 661, 1059, 1381
HpyCH4III	ACNGT	3 cut(s)	338, 362, 1581
HpyCH4IV	ACGT	5 cut(s)	76, 438, 564, 894, 1628
HpyF10VI	GCNNNNNNNGC	7 cut(s)	182, 851, 1271, 1280, 1537, 1543, 1573
HpyF3I	CTNAG	3 cut(s)	374, 447, 1476
HpySE526I	ACGT	5 cut(s)	76, 438, 564, 894, 1628
Hsp92I	GRCGYC	3 cut(s)	76, 755, 1373
Hsp92II	CATG	6 cut(s)	154, 430, 489, 1073, 1119, 1331
HspAI	GCGC	1 cut(s)	1111
Kpn2I	TCCGGA	1 cut(s)	290
Ksp22I	TGATCA	1 cut(s)	820
Kzo9I	GATC	6 cut(s)	318, 660, 820, 1393, 1494, 1501
LguI	GCTCTTC	1 cut(s)	456
LmnI	GCTCC	4 cut(s)	17, 1051, 1262, 1545
Lsp1109I	GCAGC	4 cut(s)	752, 953, 1050, 1549
LweI	GCATC	4 cut(s)	163, 507, 822, 1261
MaeI	CTAG	3 cut(s)	161, 576, 858
MaeII	ACGT	5 cut(s)	76, 438, 564, 894, 1628
MaeIII	GTNAC	6 cut(s)	244, 362, 475, 895, 1187, 1462
MalI	GATC	6 cut(s)	320, 662, 822, 1395, 1496, 1503
MbiI	CCGCTC	1 cut(s)	1265
MboI	GATC	6 cut(s)	318, 660, 820, 1393, 1494, 1501
MfeI	CAATTG	1 cut(s)	936
MflI	RGATCY	1 cut(s)	318
MhlI	GDGCHC	3 cut(s)	72, 243, 468
MlyI	GAGTC	3 cut(s)	241, 922, 1563
MmeI	TCCRAC	5 cut(s)	520, 633, 775, 956, 1450
MroI	TCCGGA	1 cut(s)	290
MroXI	GAANNNNTTC	1 cut(s)	806
MseI	TTAA	1 cut(s)	786
MslI	CAYNNNNRTG	3 cut(s)	551, 983, 1631
MspI	CCGG	9 cut(s)	65, 291, 314, 473, 644, 900, 1401, 1416, 1438
MspR9I	CCNGG	4 cut(s)	315, 473, 1084, 1384
MunI	CAATTG	1 cut(s)	936
Mva1269I	GAATGC	2 cut(s)	188, 1526
MvaI	CCWGG	2 cut(s)	1084, 1384
MvnI	CGCG	1 cut(s)	1567
MwoI	GCNNNNNNNGC	7 cut(s)	182, 851, 1271, 1280, 1537, 1543, 1573
NciI	CCSGG	2 cut(s)	315, 473
NdeII	GATC	6 cut(s)	318, 660, 820, 1393, 1494, 1501
NlaIII	CATG	6 cut(s)	154, 430, 489, 1073, 1119, 1331
NlaIV	GGNNCC	6 cut(s)	273, 312, 494, 627, 1171, 1442
NmuCI	GTSAC	4 cut(s)	244, 362, 475, 1462
NruI	TCGCGA	1 cut(s)	1567
NsbI	TGCGCA	1 cut(s)	1112
NspI	RCATGY	1 cut(s)	1073
OliI	CACNNNNGTG	2 cut(s)	551, 1631
PciI	ACATGT	1 cut(s)	1069
PciSI	GCTCTTC	1 cut(s)	456
PcsI	WCGNNNNNNNCGW	1 cut(s)	177
PctI	GAATGC	2 cut(s)	188, 1526
PdmI	GAANNNNTTC	1 cut(s)	806
PfeI	GAWTC	5 cut(s)	692, 776, 832, 1247, 1515
PflMI	CCANNNNNTGG	1 cut(s)	486
PinAI	ACCGGT	1 cut(s)	899
PkrI	GCNGC	6 cut(s)	187, 742, 943, 1065, 1267, 1539
Ple19I	CGATCG	3 cut(s)	663, 1497, 1504
PleI	GAGTC	3 cut(s)	241, 922, 1563
PpsI	GAGTC	3 cut(s)	241, 922, 1563
Ppu21I	YACGTR	1 cut(s)	439
PscI	ACATGT	1 cut(s)	1069
PsiI	TTATAA	1 cut(s)	1017
Psp6I	CCWGG	2 cut(s)	1082, 1382
PspEI	GGTNACC	1 cut(s)	475
PspFI	CCCAGC	1 cut(s)	588
PspGI	CCWGG	2 cut(s)	1082, 1382
PspN4I	GGNNCC	6 cut(s)	273, 312, 494, 627, 1171, 1442
PspPI	GGNCC	5 cut(s)	271, 311, 1338, 1398, 1490
PstNI	CAGNNNCTG	1 cut(s)	1579
PsuI	RGATCY	1 cut(s)	318
PvuI	CGATCG	3 cut(s)	663, 1497, 1504
RruI	TCGCGA	1 cut(s)	1567
RsaI	GTAC	2 cut(s)	437, 767
RsaNI	GTAC	2 cut(s)	436, 766
RseI	CAYNNNNRTG	3 cut(s)	551, 983, 1631
Rsr2I	CGGWCCG	1 cut(s)	1398
RsrII	CGGWCCG	1 cut(s)	1398
SalI	GTCGAC	1 cut(s)	1378
SapI	GCTCTTC	1 cut(s)	456
SaqAI	TTAA	1 cut(s)	786
SatI	GCNGC	6 cut(s)	186, 741, 942, 1064, 1266, 1538
Sau3AI	GATC	6 cut(s)	318, 660, 820, 1393, 1494, 1501
Sau96I	GGNCC	5 cut(s)	271, 311, 1338, 1398, 1490
SchI	GAGTC	3 cut(s)	241, 922, 1563
ScrFI	CCNGG	4 cut(s)	315, 473, 1084, 1384
SduI	GDGCHC	3 cut(s)	72, 243, 468
SfaNI	GCATC	4 cut(s)	163, 507, 822, 1261
SinI	GGWCC	4 cut(s)	271, 311, 1398, 1490
SmiMI	CAYNNNNRTG	3 cut(s)	551, 983, 1631
SpeI	ACTAGT	2 cut(s)	575, 857
SsiI	CCGC	7 cut(s)	186, 269, 490, 621, 1265, 1524, 1621
SspI	AATATT	1 cut(s)	39
SspMI	CTAG	3 cut(s)	161, 576, 858
StyD4I	CCNGG	4 cut(s)	313, 471, 1082, 1382
StyI	CCWWGG	1 cut(s)	549
TaaI	ACNGT	3 cut(s)	338, 362, 1581
TaiI	ACGT	5 cut(s)	79, 441, 567, 897, 1631
TauI	GCSGC	2 cut(s)	188, 1268
TfiI	GAWTC	5 cut(s)	692, 776, 832, 1247, 1515
Tru1I	TTAA	1 cut(s)	786
Tru9I	TTAA	1 cut(s)	786
TscAI	CASTG	4 cut(s)	421, 702, 957, 1584
TseFI	GTSAC	4 cut(s)	244, 362, 475, 1462
TseI	GCWGC	4 cut(s)	740, 941, 1063, 1537
Tsp45I	GTSAC	4 cut(s)	244, 362, 475, 1462
TspDTI	ATGAA	8 cut(s)	138, 415, 572, 903, 1020, 1147, 1316, 1398
TspGWI	ACGGA	1 cut(s)	169
TspRI	CASTG	4 cut(s)	421, 702, 957, 1584
Van91I	CCANNNNNTGG	1 cut(s)	486
VneI	GTGCAC	1 cut(s)	68
VpaK11BI	GGWCC	4 cut(s)	271, 311, 1398, 1490
XapI	RAATTY	4 cut(s)	770, 781, 806, 1309
XbaI	TCTAGA	1 cut(s)	160
XceI	RCATGY	1 cut(s)	1073
XmiI	GTMKAC	1 cut(s)	1379
XmnI	GAANNNNTTC	1 cut(s)	806
XspI	CTAG	3 cut(s)	161, 576, 858
ZraI	GACGTC	1 cut(s)	77

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.