Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0001225

Physical Location & Seq

Genomic Coordinates Forward (+)

39438819 .. 39445899

Gene Structure 7081 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G017800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1446 bp

ATGCAAGCCAACCCCTTCCAAGTCACGGCCAAATCAATATACCCGTCACTTATAAACATACCTATGGTGCCCCGACAGCACCGTCCTCCTTCTTTGCGACAACTCCTCAAACCGCCATGTGCCATCTCCACTTCCCCTCCCAATGACTCCAACCGTTCTACTCCAATTACCATGTCCGCCCTAGCAGTGGTCGATGACTCCGTGGCTGCGTTCCGGGACTACCAGTTTCTCTTTGTCTCCCAACGCTCGGAAACAAACGAGCCGGTGACTCTAGAAGTTGTTGAAGGTGCGGTCCCGCCAGAGTTTCCTTCCGGAACATACTATTTGGCAGGACCGGGGCTCTTCAGGGACGACCACGGCTCCACTGTGCACCCTTTGGATGGTCACGGCTACCTTAGGGCTTTCACTTTCCATGGGGTTAGTGGGAACGAGGTCAATGTCAAGTTCATGGCCAAGTACGTGAAAACTGAGACGCAGTTGGAAGAGCAGGACCCCGTGACCGGCAAGTGGCGGTTCACGCATAGGGGAGCGTTCTCGGTGTTGAAGGGAGGACAGAAAATCGGGAACACTAAGGTGATCAAAAACGTGGCGAATACTAGTGTGTTGAGCTGGGGTGGGAGGCTGATGTGCTTGTGGGAAGGTGGTGGGGAACCTTACGAAATTGAAAAGGAGACCTTGGAAACTGTCGGGAAGGTCAAGCTCATGGAAGGTTGCGATCTGGTGGTGGAGAGTGCGAGTGATGGCCGTGGTGTTTGGGATGTTGCTGCAAGATTGTTGAAGCCGATTTTGTATGGAGTGTTTAAGATGCCAATAAAGCGACTGTTAGCTCATTACAAGCTCGACACTAACAAAGATAGACTTCTTATGATGTCATGTAATGCAGAAGACATACTGTTGCCACACAATACTTTTACATTTTACGAATTTGATTCAAATTTTAAGGAGGTGGGAAAGAAAGAGTTCATCATCCCAGACCACTTGTACATTCATGATTGGGCTTTCACAACCACTTATTATATACTATTTGCTAACCGCGTTAAACTTAATGCTTCTGGTGCAATGACTTCAGTTTGTGGAATCACTCCAACGATGACAGCATTATCTGTGAATCCTACCAAGGACACATCTCCAATATATTTGCTTCCTAGGTTTCCTAATGATCTGAATTGTAGTCGAGATTGGAGAGTACCTATTGAAGCTCCTTCACGATTTTGGCTGCAACATGTAGGCAATGCCTATGATTATTTGGATGAAAATGGGAATTCGGAGATCCAGATACATGCTTCTGTCTGCTCTTACGAGTGGTTCACTTTGCAAAAGTTGTTTGGATATGATTGGCGAAGTGGTAAACTCGACCCTTCGATTATGAACTTGGGTAGAAACCACAGCAGAACATTGCCTCACCTTGTTCAGGTTTCTCTCTTAACATACGATGATGTATACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001763 GO:0003674 GO:0003824 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008300 GO:0008610 GO:0009056 GO:0009058 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009987 GO:0010016 GO:0010033 GO:0010223 GO:0010346 GO:0010436 GO:0010817 GO:0016042 GO:0016106 GO:0016114 GO:0016119 GO:0016121 GO:0016491 GO:0016701 GO:0016702 GO:0018130 GO:0032501 GO:0032502 GO:0042214 GO:0042221 GO:0042445 GO:0042446 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0045549 GO:0046247 GO:0046483 GO:0048367 GO:0048646 GO:0048731 GO:0048856 GO:0050896 GO:0051213 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:1901334 GO:1901336 GO:1901360 GO:1901362 GO:1901575 GO:1901576 GO:1901600 GO:1901601 GO:1905393

KEGG Pathways

Metabolic & Signaling

ko00906 map00906

Pfam Domains

Protein Families

RPE65

Protein Analysis

481

Amino Acids

54.21

Weight (kDa)

6.54

Isoelectric Point (pI)

37.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPE65	PF03055	79 - 442	6.4e-50	Retinal pigment epithelial membrane protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001225)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44990 AT2G44990 AT2G44990
fragaria_vesca	FvH4_7g10450
malus_domestica	MD07G1110600.v1.1
prunus_persica	Prupe.2G133900_v2.0.a1
pyrus_communis	pycom07g09530
rosa_chinensis	RchiOBHm_Chr1g0342921 RchiOBHm_Chr1g0342931 RchiOBHm_Chr1g0348141 RchiOBHm_Chr1g0348171 RchiOBHm_Chr1g0348201 RchiOBHm_Chr2g0136091 RchiOBHm_Chr7g0229961
rosa_laevigata	RLG00000028678 RLG00000028682 RLG00000028684 RLG00000028685 RLG00000028686
rosa_multiflora	Rmu_co8414565.1_g000001 Rmu_co8499605.1_g000001 Rmu_sc0001563.1_g000031 Rmu_sc0001890.1_g000013 Rmu_sc0001890.1_g000015 Rmu_sc0002209.1_g000017 Rmu_sc0003991.1_g000009 Rmu_sc0004502.1_g000011 Rmu_sc0004502.1_g000018 Rmu_sc0005046.1_g000018
rosa_roxburghii	Rroxscaffold_4G00307110 Rroxscaffold_4G00307160 Rroxscaffold_4G00307170 Rroxscaffold_4G00307180
rosa_rugosa	Rorug01G0145700.1 Rorug01G0192700 Rorug01G0192900 Rorug01G0193500
rosa_samantha	Rh1AG095900 Rh1AG210700 Rh1AG210800 Rh1BG176200 Rh1BG176800 Rh1BG177100 Rh1BG177200 Rh1CG195000 Rh1CG195100 Rh1DG205900 Rh1DG206300 Rh1DG206600 Rh1DG206700 Rh3DG305500
rosa_wichuraiana	Rw0G011410 Rw1G017570 Rw1G017580 Rw1G017590 Rw1G017800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	53
AasI	GACNNNNNNGTC	1 cut(s)	81
AccB1I	GGYRCC	1 cut(s)	67
AccI	GTMKAC	1 cut(s)	1440
AccII	CGCG	1 cut(s)	1035
AccIII	TCCGGA	1 cut(s)	311
AciI	CCGC	6 cut(s)	113, 177, 290, 296, 511, 1033
AclWI	GGATC	1 cut(s)	1264
AcoI	YGGCCR	3 cut(s)	27, 450, 742
AcsI	RAATTY	3 cut(s)	923, 934, 1261
AcuI	CTGAAG	2 cut(s)	328, 1050
AfaI	GTAC	3 cut(s)	458, 983, 1188
AfiI	CCNNNNNNNGG	7 cut(s)	25, 187, 247, 380, 500, 507, 1411
AflIII	ACRYGT	1 cut(s)	1222
AgsI	TTSAA	6 cut(s)	284, 544, 665, 778, 933, 1196
AhlI	ACTAGT	1 cut(s)	596
AleI	CACNNNNGTG	1 cut(s)	572
AluBI	AGCT	5 cut(s)	609, 700, 827, 838, 1199
AluI	AGCT	5 cut(s)	609, 700, 827, 838, 1199
Alw21I	GWGCWC	1 cut(s)	372
Alw26I	GTCTC	3 cut(s)	241, 464, 665
Alw44I	GTGCAC	1 cut(s)	368
AlwI	GGATC	1 cut(s)	1264
Aor13HI	TCCGGA	1 cut(s)	311
AoxI	GGCC	3 cut(s)	27, 450, 742
ApaLI	GTGCAC	1 cut(s)	368
ApeKI	GCWGC	3 cut(s)	206, 764, 1216
ApoI	RAATTY	3 cut(s)	923, 934, 1261
Asp700I	GAANNNNTTC	1 cut(s)	959
AspA2I	CCTAGG	1 cut(s)	1145
AspS9I	GGNCC	3 cut(s)	292, 332, 490
AsuC2I	CCSGG	2 cut(s)	215, 336
AsuHPI	GGTGA	3 cut(s)	277, 586, 1394
AvaII	GGWCC	3 cut(s)	292, 332, 490
AvrII	CCTAGG	1 cut(s)	1145
AxyI	CCTNAGG	1 cut(s)	395
BaeGI	GKGCMC	2 cut(s)	72, 372
BalI	TGGCCA	1 cut(s)	452
BanI	GGYRCC	1 cut(s)	67
BanII	GRGCYC	1 cut(s)	342
BbsI	GAAGAC	1 cut(s)	891
Bbv12I	GWGCWC	1 cut(s)	372
BbvI	GCAGC	3 cut(s)	193, 751, 1203
BccI	CCATC	3 cut(s)	131, 374, 734
BceAI	ACGGC	4 cut(s)	42, 373, 403, 729
BclI	TGATCA	1 cut(s)	576
BcnI	CCSGG	2 cut(s)	215, 336
BcoDI	GTCTC	3 cut(s)	241, 464, 665
BcuI	ACTAGT	1 cut(s)	596
BfaI	CTAG	5 cut(s)	182, 272, 597, 1146, 1444
BisI	GCNGC	3 cut(s)	207, 765, 1217
BlnI	CCTAGG	1 cut(s)	1145
BlsI	GCNGC	3 cut(s)	208, 766, 1218
Bme1390I	CCNGG	2 cut(s)	215, 336
Bme18I	GGWCC	3 cut(s)	292, 332, 490
BmgT120I	GGNCC	3 cut(s)	292, 332, 490
BmiI	GGNNCC	5 cut(s)	69, 294, 361, 492, 651
BmrFI	CCNGG	2 cut(s)	215, 336
BmsI	GCATC	1 cut(s)	795
BpiI	GAAGAC	1 cut(s)	891
BpuMI	CCSGG	2 cut(s)	215, 336
BsaAI	YACGTR	1 cut(s)	460
BsaI	GGTCTC	1 cut(s)	665
BsaJI	CCNNGG	8 cut(s)	201, 335, 355, 412, 675, 745, 1116, 1145
BsaWI	WCCGGW	1 cut(s)	311
BsaXI	ACNNNNNCTCC	4 cut(s)	121, 151, 344, 374
Bsc4I	CCNNNNNNNGG	7 cut(s)	25, 187, 247, 380, 500, 507, 1411
Bse118I	RCCGGY	2 cut(s)	262, 500
Bse1I	ACTGG	1 cut(s)	223
Bse21I	CCTNAGG	1 cut(s)	395
Bse3DI	GCAATG	3 cut(s)	1065, 1237, 1394
BseAI	TCCGGA	1 cut(s)	311
BseDI	CCNNGG	8 cut(s)	201, 335, 355, 412, 675, 745, 1116, 1145
BseGI	GGATG	4 cut(s)	385, 763, 966, 1255
BseLI	CCNNNNNNNGG	7 cut(s)	25, 187, 247, 380, 500, 507, 1411
BseMI	GCAATG	3 cut(s)	1065, 1237, 1394
BseMII	CTCAG	1 cut(s)	459
BseNI	ACTGG	1 cut(s)	223
BseRI	GAGGAG	1 cut(s)	95
BseSI	GKGCMC	2 cut(s)	72, 372
BseXI	GCAGC	3 cut(s)	193, 751, 1203
BseYI	CCCAGC	1 cut(s)	609
Bsh1236I	CGCG	1 cut(s)	1035
BshFI	GGCC	3 cut(s)	29, 452, 744
BshNI	GGYRCC	1 cut(s)	67
BsiHKAI	GWGCWC	1 cut(s)	372
BsiSI	CCGG	5 cut(s)	214, 263, 312, 335, 501
BslFI	GGGAC	3 cut(s)	230, 278, 362
BslI	CCNNNNNNNGG	7 cut(s)	25, 187, 247, 380, 500, 507, 1411
BsmAI	GTCTC	3 cut(s)	241, 464, 665
BsmBI	CGTCTC	1 cut(s)	464
BsmFI	GGGAC	3 cut(s)	230, 278, 362
BsnI	GGCC	3 cut(s)	29, 452, 744
Bso31I	GGTCTC	1 cut(s)	665
Bsp1286I	GDGCHC	3 cut(s)	72, 342, 372
Bsp13I	TCCGGA	1 cut(s)	311
Bsp1407I	TGTACA	1 cut(s)	981
Bsp143I	GATC	4 cut(s)	576, 715, 1159, 1269
Bsp19I	CCATGG	1 cut(s)	412
BspACI	CCGC	6 cut(s)	113, 177, 290, 296, 511, 1033
BspANI	GGCC	3 cut(s)	29, 452, 744
BspCNI	CTCAG	1 cut(s)	460
BspEI	TCCGGA	1 cut(s)	311
BspFNI	CGCG	1 cut(s)	1035
BspHI	TCATGA	1 cut(s)	988
BspLI	GGNNCC	5 cut(s)	69, 294, 361, 492, 651
BspPI	GGATC	1 cut(s)	1264
BspQI	GCTCTTC	2 cut(s)	347, 477
BspT107I	GGYRCC	1 cut(s)	67
BspTNI	GGTCTC	1 cut(s)	665
BsrDI	GCAATG	3 cut(s)	1065, 1237, 1394
BsrFI	RCCGGY	2 cut(s)	262, 500
BsrGI	TGTACA	1 cut(s)	981
BsrI	ACTGG	1 cut(s)	223
BssAI	RCCGGY	2 cut(s)	262, 500
BssECI	CCNNGG	8 cut(s)	201, 335, 355, 412, 675, 745, 1116, 1145
BssMI	GATC	4 cut(s)	576, 715, 1159, 1269
BssNAI	GTATAC	1 cut(s)	1441
BssT1I	CCWWGG	4 cut(s)	412, 675, 1116, 1145
Bst1107I	GTATAC	1 cut(s)	1441
Bst4CI	ACNGT	6 cut(s)	83, 155, 367, 685, 822, 894
Bst6I	CTCTTC	2 cut(s)	347, 477
BstAUI	TGTACA	1 cut(s)	981
BstBAI	YACGTR	1 cut(s)	460
BstC8I	GCNNGC	1 cut(s)	6
BstDEI	CTNAG	3 cut(s)	395, 468, 570
BstDSI	CCRYGG	4 cut(s)	201, 355, 412, 745
BstENI	CCTNNNNNAGG	1 cut(s)	1409
BstF5I	GGATG	4 cut(s)	385, 763, 966, 1255
BstFNI	CGCG	1 cut(s)	1035
BstKTI	GATC	4 cut(s)	579, 718, 1162, 1272
BstMAI	GTCTC	3 cut(s)	241, 464, 665
BstMBI	GATC	4 cut(s)	576, 715, 1159, 1269
BstMWI	GCNNNNNNNGC	4 cut(s)	76, 517, 814, 1055
BstNSI	RCATGY	2 cut(s)	1226, 1283
BstSCI	CCNGG	2 cut(s)	213, 334
BstSLI	GKGCMC	2 cut(s)	72, 372
BstUI	CGCG	1 cut(s)	1035
BstV1I	GCAGC	3 cut(s)	193, 751, 1203
BstV2I	GAAGAC	1 cut(s)	891
BstX2I	RGATCY	1 cut(s)	1269
BstYI	RGATCY	1 cut(s)	1269
BstZ17I	GTATAC	1 cut(s)	1441
Bsu36I	CCTNAGG	1 cut(s)	395
BsuRI	GGCC	3 cut(s)	29, 452, 744
BtgI	CCRYGG	4 cut(s)	201, 355, 412, 745
BtsCI	GGATG	4 cut(s)	385, 763, 966, 1255
BtsI	GCAGTG	1 cut(s)	192
BtsIMutI	CAGTG	2 cut(s)	192, 363
Cac8I	GCNNGC	1 cut(s)	6
CciI	TCATGA	1 cut(s)	988
Cfr10I	RCCGGY	2 cut(s)	262, 500
Cfr13I	GGNCC	3 cut(s)	292, 332, 490
CseI	GACGC	1 cut(s)	481
Csp6I	GTAC	3 cut(s)	457, 982, 1187
CviAII	CATG	9 cut(s)	117, 172, 413, 448, 703, 873, 989, 1223, 1280
CviQI	GTAC	3 cut(s)	457, 982, 1187
DdeI	CTNAG	3 cut(s)	395, 468, 570
DpnI	GATC	4 cut(s)	578, 717, 1161, 1271
DpnII	GATC	4 cut(s)	576, 715, 1159, 1269
DrdI	GACNNNNNNGTC	1 cut(s)	81
DseDI	GACNNNNNNGTC	1 cut(s)	81
EaeI	YGGCCR	3 cut(s)	27, 450, 742
Eam1104I	CTCTTC	2 cut(s)	347, 477
EarI	CTCTTC	2 cut(s)	347, 477
EciI	GGCGGA	1 cut(s)	166
Eco130I	CCWWGG	4 cut(s)	412, 675, 1116, 1145
Eco24I	GRGCYC	1 cut(s)	342
Eco31I	GGTCTC	1 cut(s)	665
Eco47I	GGWCC	3 cut(s)	292, 332, 490
Eco57I	CTGAAG	2 cut(s)	328, 1050
Eco81I	CCTNAGG	1 cut(s)	395
EcoNI	CCTNNNNNAGG	1 cut(s)	1409
EcoO109I	RGGNCCY	1 cut(s)	490
EcoRI	GAATTC	1 cut(s)	1261
EcoT14I	CCWWGG	4 cut(s)	412, 675, 1116, 1145
EcoT38I	GRGCYC	1 cut(s)	342
ErhI	CCWWGG	4 cut(s)	412, 675, 1116, 1145
Esp3I	CGTCTC	1 cut(s)	464
FaeI	CATG	9 cut(s)	120, 175, 416, 451, 706, 876, 992, 1226, 1283
FalI	AAGNNNNNCTT	4 cut(s)	659, 691, 843, 875
FaqI	GGGAC	3 cut(s)	230, 278, 362
FatI	CATG	9 cut(s)	116, 171, 412, 447, 702, 872, 988, 1222, 1279
FauI	CCCGC	1 cut(s)	303
FbaI	TGATCA	1 cut(s)	576
FblI	GTMKAC	1 cut(s)	1440
Fnu4HI	GCNGC	3 cut(s)	207, 765, 1217
FokI	GGATG	4 cut(s)	392, 770, 953, 1262
FriOI	GRGCYC	1 cut(s)	342
Fsp4HI	GCNGC	3 cut(s)	207, 765, 1217
FspBI	CTAG	5 cut(s)	182, 272, 597, 1146, 1444
GluI	GCNGC	3 cut(s)	207, 765, 1217
GsaI	CCCAGC	1 cut(s)	613
HaeIII	GGCC	3 cut(s)	29, 452, 744
HapII	CCGG	5 cut(s)	214, 263, 312, 335, 501
HgaI	GACGC	1 cut(s)	481
Hin1II	CATG	9 cut(s)	120, 175, 416, 451, 706, 876, 992, 1226, 1283
HinfI	GANTC	6 cut(s)	146, 197, 268, 929, 1077, 1108
HpaII	CCGG	5 cut(s)	214, 263, 312, 335, 501
HphI	GGTGA	3 cut(s)	277, 586, 1394
Hpy166II	GTNNAC	5 cut(s)	370, 516, 1308, 1349, 1441
Hpy188I	TCNGA	3 cut(s)	250, 1164, 1267
Hpy188III	TCNNGA	8 cut(s)	272, 312, 562, 688, 989, 1175, 1206, 1273
Hpy8I	GTNNAC	5 cut(s)	370, 516, 1308, 1349, 1441
HpyCH4III	ACNGT	6 cut(s)	83, 155, 367, 685, 822, 894
HpyCH4IV	ACGT	2 cut(s)	459, 585
HpyCH4V	TGCA	7 cut(s)	4, 370, 767, 881, 1058, 1219, 1315
HpyF10VI	GCNNNNNNNGC	4 cut(s)	76, 517, 814, 1055
HpyF3I	CTNAG	3 cut(s)	395, 468, 570
HpySE526I	ACGT	2 cut(s)	459, 585
Hsp92II	CATG	9 cut(s)	120, 175, 416, 451, 706, 876, 992, 1226, 1283
Kpn2I	TCCGGA	1 cut(s)	311
Ksp22I	TGATCA	1 cut(s)	576
Kzo9I	GATC	4 cut(s)	576, 715, 1159, 1269
LguI	GCTCTTC	2 cut(s)	347, 477
LmnI	GCTCC	3 cut(s)	365, 527, 1204
Lsp1109I	GCAGC	3 cut(s)	193, 751, 1203
LweI	GCATC	1 cut(s)	795
MaeI	CTAG	5 cut(s)	182, 272, 597, 1146, 1444
MaeII	ACGT	2 cut(s)	459, 585
MaeIII	GTNAC	5 cut(s)	22, 45, 265, 383, 496
MalI	GATC	4 cut(s)	578, 717, 1161, 1271
MboI	GATC	4 cut(s)	576, 715, 1159, 1269
MboII	GAAGA	3 cut(s)	334, 494, 896
MflI	RGATCY	1 cut(s)	1269
MhlI	GDGCHC	3 cut(s)	72, 342, 372
MlsI	TGGCCA	1 cut(s)	452
MluCI	AATT	6 cut(s)	165, 660, 923, 934, 1165, 1261
MluNI	TGGCCA	1 cut(s)	452
MlyI	GAGTC	3 cut(s)	140, 191, 262
MmeI	TCCRAC	3 cut(s)	174, 459, 1109
MnlI	CCTC	8 cut(s)	96, 116, 147, 424, 542, 612, 937, 1410
Mox20I	TGGCCA	1 cut(s)	452
MroI	TCCGGA	1 cut(s)	311
MroXI	GAANNNNTTC	1 cut(s)	959
MscI	TGGCCA	1 cut(s)	452
MseI	TTAA	5 cut(s)	801, 939, 1038, 1044, 1424
MslI	CAYNNNNRTG	2 cut(s)	62, 572
Msp20I	TGGCCA	1 cut(s)	452
MspI	CCGG	5 cut(s)	214, 263, 312, 335, 501
MspR9I	CCNGG	2 cut(s)	215, 336
MvnI	CGCG	1 cut(s)	1035
MwoI	GCNNNNNNNGC	4 cut(s)	76, 517, 814, 1055
NciI	CCSGG	2 cut(s)	215, 336
NcoI	CCATGG	1 cut(s)	412
NdeII	GATC	4 cut(s)	576, 715, 1159, 1269
NlaIII	CATG	9 cut(s)	120, 175, 416, 451, 706, 876, 992, 1226, 1283
NlaIV	GGNNCC	5 cut(s)	69, 294, 361, 492, 651
NmuCI	GTSAC	5 cut(s)	22, 45, 265, 383, 496
NspI	RCATGY	2 cut(s)	1226, 1283
OliI	CACNNNNGTG	1 cut(s)	572
PagI	TCATGA	1 cut(s)	988
PciI	ACATGT	1 cut(s)	1222
PciSI	GCTCTTC	2 cut(s)	347, 477
PcsI	WCGNNNNNNNCGW	1 cut(s)	198
PdmI	GAANNNNTTC	1 cut(s)	959
PfeI	GAWTC	3 cut(s)	929, 1077, 1108
PfoI	TCCNGGA	1 cut(s)	213
PkrI	GCNGC	3 cut(s)	208, 766, 1218
PleI	GAGTC	3 cut(s)	140, 191, 262
PpsI	GAGTC	3 cut(s)	140, 191, 262
Ppu21I	YACGTR	1 cut(s)	460
PpuMI	RGGWCCY	1 cut(s)	490
PscI	ACATGT	1 cut(s)	1222
PsiI	TTATAA	1 cut(s)	53
Psp5II	RGGWCCY	1 cut(s)	490
PspFI	CCCAGC	1 cut(s)	609
PspN4I	GGNNCC	5 cut(s)	69, 294, 361, 492, 651
PspPI	GGNCC	3 cut(s)	292, 332, 490
PspPPI	RGGWCCY	1 cut(s)	490
PsuI	RGATCY	1 cut(s)	1269
RsaI	GTAC	3 cut(s)	458, 983, 1188
RsaNI	GTAC	3 cut(s)	457, 982, 1187
RseI	CAYNNNNRTG	2 cut(s)	62, 572
SapI	GCTCTTC	2 cut(s)	347, 477
SaqAI	TTAA	5 cut(s)	801, 939, 1038, 1044, 1424
SatI	GCNGC	3 cut(s)	207, 765, 1217
Sau3AI	GATC	4 cut(s)	576, 715, 1159, 1269
Sau96I	GGNCC	3 cut(s)	292, 332, 490
SchI	GAGTC	3 cut(s)	140, 191, 262
ScrFI	CCNGG	2 cut(s)	215, 336
SduI	GDGCHC	3 cut(s)	72, 342, 372
SfaNI	GCATC	1 cut(s)	795
SinI	GGWCC	3 cut(s)	292, 332, 490
SmiMI	CAYNNNNRTG	2 cut(s)	62, 572
SpeI	ACTAGT	1 cut(s)	596
Sse9I	AATT	6 cut(s)	165, 660, 923, 934, 1165, 1261
SsiI	CCGC	6 cut(s)	113, 177, 290, 296, 511, 1033
SspMI	CTAG	5 cut(s)	182, 272, 597, 1146, 1444
StyD4I	CCNGG	2 cut(s)	213, 334
StyI	CCWWGG	4 cut(s)	412, 675, 1116, 1145
TaaI	ACNGT	6 cut(s)	83, 155, 367, 685, 822, 894
TaiI	ACGT	2 cut(s)	462, 588
TaqI	TCGA	5 cut(s)	192, 840, 1174, 1353, 1361
TasI	AATT	6 cut(s)	165, 660, 923, 934, 1165, 1261
TatI	WGTACW	1 cut(s)	981
TfiI	GAWTC	3 cut(s)	929, 1077, 1108
Tru1I	TTAA	5 cut(s)	801, 939, 1038, 1044, 1424
Tru9I	TTAA	5 cut(s)	801, 939, 1038, 1044, 1424
TscAI	CASTG	2 cut(s)	192, 370
TseFI	GTSAC	5 cut(s)	22, 45, 265, 383, 496
TseI	GCWGC	3 cut(s)	206, 764, 1216
Tsp45I	GTSAC	5 cut(s)	22, 45, 265, 383, 496
TspDTI	ATGAA	5 cut(s)	436, 952, 977, 1266, 1382
TspGWI	ACGGA	1 cut(s)	190
TspRI	CASTG	2 cut(s)	192, 370
VneI	GTGCAC	1 cut(s)	368
VpaK11BI	GGWCC	3 cut(s)	292, 332, 490
XagI	CCTNNNNNAGG	1 cut(s)	1409
XapI	RAATTY	3 cut(s)	923, 934, 1261
XbaI	TCTAGA	1 cut(s)	271
XceI	RCATGY	2 cut(s)	1226, 1283
XcmI	CCANNNNNNNNNTGG	1 cut(s)	419
XmaJI	CCTAGG	1 cut(s)	1145
XmiI	GTMKAC	1 cut(s)	1440
XmnI	GAANNNNTTC	1 cut(s)	959
XspI	CTAG	5 cut(s)	182, 272, 597, 1146, 1444

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.