Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004502.1

Orthogroup ID

OG0001225

Physical Location & Seq

Genomic Coordinates Forward (+)

68656 .. 73395

Gene Structure 4740 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004502.1_g000018.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

atgtcaactctagatgtggtcgatgcctccgtggccgacttctgggactaccagttgctcttcgtctcacaacgcttggaaacaaacgagcccgtggctctacaagtcgtcgaaggtgcggtcccgacggagtttccttccggaacatactacttggcgggaccggggatcttcagggatgaccacggttcgacaatgcaccctttagacggtcacggctacctcagggcttttactttcgatggggttaatggggataagttcagtgtcaagttcatggcgaggtacgtgaatactgaggcaaaggtggaagagcacgacccggtgaccaacacgtggcggttccgacatagggggttgttctcgatgctgaagagaggagagaaagtttggaacaccaaggtgatgaaaaatgtggcgaatactagtgtgttgagctggggtgggagactgatgtgcttgtgggatggcggtgaaccatacgaaattgaaccagagaggttggatacgatcgggaaggtcaagctgatggatggttgggattcagtggtggagaggagaagcgatggtggtgatgtatgggatgttgcagcaaggttgctgaagccgattttgtacggagtgtttaagatgccagtgaagcgattattagctcattataagttcgatgctcgcagaaatagacttcttttaatgtcatgtaatgcagaagatatttttttaccgcgcaacaattttacattttatgaatttgattcaaattttaaggtggttggaaagaaagaattcatcatccctgatcacttgatgattcatgattgggctttcacagccaccagttatatactatttgctaatcgtgtcaagcttgaattcaccggtgcaatgacttcattttgtggaattactccaacaattgcagcattatcagtgaaccctagcaaggaaacttctcccatatatgtgcttcctcggtttcctaatgaagtgaattataatcgagattggagagtgcctgttgaagctccttcacaattttggctgctacatgtaggcaatgcctatgagagtttggatgaaaatgggaattcggagatccaaatacaagcttctgtttgctcttacgagtggttcacattacataaattacttggatatgattggcaaagtggtaaactggacccttcgattatgtacttaaatggaaacaaaagcaagaaaatgcctcatcttgtccaggtttccatcaacttggataccggtaccgatgggatctgtcaaagatgtgatattgagccattaaaccaatggatcaagtcatcagattttcccgtcataaatccagcattttcaggcagcaagaataaatacatctatgcagcagctttttcaggttctcgcagggcattgccaaactttccatatgacatggtggtgaagctcaatctttcaactaaatctgtgcgcacatggtctgctgatagtcgaagatttatcggcgaacccactttcatagccaaaggttccgaagaagatgagggttacattcttgtggttgagtatgcagttgcagttcaaaggtgctatctggttatcttggattcaaagaggattggagcggctgatgcacttgtggcaagacttgaagtccccaaacacctaaattttcctcttggttttcatggtttctgggccaaagcttcgagcttcctctacccaaaagacgggtcgtcaacccggaaggaagattcgatcggaacttcatcctccagccatgtccaactggcacatcagcaccatcttcttcatctcaatgtcgccatcacgcctaaggtcgtagttcgttcgatcgtcgatcatggaagaagaatcgaatgccaaaagattttgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001763 GO:0003674 GO:0003824 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008300 GO:0008610 GO:0009056 GO:0009058 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009987 GO:0010016 GO:0010033 GO:0010223 GO:0010346 GO:0010436 GO:0010817 GO:0016042 GO:0016106 GO:0016114 GO:0016119 GO:0016121 GO:0016491 GO:0016701 GO:0016702 GO:0018130 GO:0032501 GO:0032502 GO:0042214 GO:0042221 GO:0042445 GO:0042446 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0045549 GO:0046247 GO:0046483 GO:0048367 GO:0048646 GO:0048731 GO:0048856 GO:0050896 GO:0051213 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:1901334 GO:1901336 GO:1901360 GO:1901362 GO:1901575 GO:1901576 GO:1901600 GO:1901601 GO:1905393

KEGG Pathways

Metabolic & Signaling

ko00906 map00906

Pfam Domains

Protein Families

RPE65

Protein Analysis

630

Amino Acids

71.4

Weight (kDa)

7.3

Isoelectric Point (pI)

39.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001225)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44990 AT2G44990 AT2G44990
fragaria_vesca	FvH4_7g10450
malus_domestica	MD07G1110600.v1.1
prunus_persica	Prupe.2G133900_v2.0.a1
pyrus_communis	pycom07g09530
rosa_chinensis	RchiOBHm_Chr1g0342921 RchiOBHm_Chr1g0342931 RchiOBHm_Chr1g0348141 RchiOBHm_Chr1g0348171 RchiOBHm_Chr1g0348201 RchiOBHm_Chr2g0136091 RchiOBHm_Chr7g0229961
rosa_laevigata	RLG00000028678 RLG00000028682 RLG00000028684 RLG00000028685 RLG00000028686
rosa_multiflora	Rmu_co8414565.1_g000001 Rmu_co8499605.1_g000001 Rmu_sc0001563.1_g000031 Rmu_sc0001890.1_g000013 Rmu_sc0001890.1_g000015 Rmu_sc0002209.1_g000017 Rmu_sc0003991.1_g000009 Rmu_sc0004502.1_g000011 Rmu_sc0004502.1_g000018 Rmu_sc0005046.1_g000018
rosa_roxburghii	Rroxscaffold_4G00307110 Rroxscaffold_4G00307160 Rroxscaffold_4G00307170 Rroxscaffold_4G00307180
rosa_rugosa	Rorug01G0145700.1 Rorug01G0192700 Rorug01G0192900 Rorug01G0193500
rosa_samantha	Rh1AG095900 Rh1AG210700 Rh1AG210800 Rh1BG176200 Rh1BG176800 Rh1BG177100 Rh1BG177200 Rh1CG195000 Rh1CG195100 Rh1DG205900 Rh1DG206300 Rh1DG206600 Rh1DG206700 Rh3DG305500
rosa_wichuraiana	Rw0G011410 Rw1G017570 Rw1G017580 Rw1G017590 Rw1G017800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	660, 996
Acc16I	TGCGCA	1 cut(s)	1466
Acc65I	GGTACC	1 cut(s)	1262
AccB1I	GGYRCC	1 cut(s)	1262
AccB7I	CCANNNNNTGG	1 cut(s)	336
AccBSI	CCGCTC	1 cut(s)	1619
AccII	CGCG	1 cut(s)	727
AccIII	TCCGGA	1 cut(s)	140
AciI	CCGC	6 cut(s)	119, 158, 340, 471, 725, 1619
AclWI	GGATC	4 cut(s)	176, 1090, 1280, 1319
AcoI	YGGCCR	1 cut(s)	33
AcsI	RAATTY	6 cut(s)	749, 760, 785, 872, 1087, 1663
AcuI	CTGAAG	3 cut(s)	157, 392, 623
AcvI	CACGTG	1 cut(s)	336
AfaI	GTAC	4 cut(s)	287, 617, 1196, 1264
AfiI	CCNNNNNNNGG	6 cut(s)	42, 209, 336, 352, 943, 1724
AflIII	ACRYGT	2 cut(s)	333, 1048
AgeI	ACCGGT	2 cut(s)	878, 1259
AgsI	TTSAA	8 cut(s)	491, 759, 872, 1022, 1452, 1577, 1605, 1646
AhdI	GACNNNNNGTC	2 cut(s)	1646, 1729
AhlI	ACTAGT	1 cut(s)	425
AjnI	CCWGG	1 cut(s)	1236
AleI	CACNNNNGTG	1 cut(s)	401
Alw21I	GWGCWC	1 cut(s)	318
Alw26I	GTCTC	2 cut(s)	70, 442
AlwI	GGATC	4 cut(s)	176, 1090, 1280, 1319
Aor13HI	TCCGGA	1 cut(s)	140
AoxI	GGCC	2 cut(s)	33, 1692
ApeKI	GCWGC	6 cut(s)	590, 920, 1042, 1356, 1379, 1382
ApoI	RAATTY	6 cut(s)	749, 760, 785, 872, 1087, 1663
ArsI	GACNNNNNNTTYG	4 cut(s)	105, 137, 1712, 1744
AsiGI	ACCGGT	2 cut(s)	878, 1259
Asp700I	GAANNNNTTC	1 cut(s)	785
Asp718I	GGTACC	1 cut(s)	1262
AspLEI	GCGC	2 cut(s)	729, 1467
AspS9I	GGNCC	4 cut(s)	121, 161, 1180, 1692
AsuC2I	CCSGG	3 cut(s)	165, 323, 1738
AsuHPI	GGTGA	6 cut(s)	337, 415, 485, 584, 868, 1447
AvaII	GGWCC	3 cut(s)	121, 161, 1180
AxyI	CCTNAGG	2 cut(s)	224, 1830
BanI	GGYRCC	1 cut(s)	1262
BanII	GRGCYC	1 cut(s)	93
BbrPI	CACGTG	1 cut(s)	336
Bbv12I	GWGCWC	1 cut(s)	318
BbvI	GCAGC	6 cut(s)	602, 932, 1029, 1368, 1391, 1394
BccI	CCATC	9 cut(s)	236, 461, 523, 527, 560, 1253, 1262, 1806, 1829
BceAI	ACGGC	1 cut(s)	232
BciT130I	CCWGG	1 cut(s)	1238
BciVI	GTATCC	2 cut(s)	499, 1249
BclI	TGATCA	1 cut(s)	799
BcnI	CCSGG	3 cut(s)	165, 323, 1738
BcoDI	GTCTC	2 cut(s)	70, 442
BcuI	ACTAGT	1 cut(s)	425
BfaI	CTAG	3 cut(s)	11, 426, 939
BfuI	GTATCC	2 cut(s)	499, 1249
BglI	GCCNNNNNGGC	1 cut(s)	32
BisI	GCNGC	7 cut(s)	591, 921, 1043, 1357, 1380, 1383, 1620
BlsI	GCNGC	7 cut(s)	592, 922, 1044, 1358, 1381, 1384, 1621
Bme1390I	CCNGG	4 cut(s)	165, 323, 1238, 1738
Bme18I	GGWCC	3 cut(s)	121, 161, 1180
BmeRI	GACNNNNNGTC	2 cut(s)	1646, 1729
BmgT120I	GGNCC	4 cut(s)	121, 161, 1180, 1692
BmiI	GGNNCC	6 cut(s)	123, 162, 344, 1182, 1264, 1525
BmrFI	CCNGG	4 cut(s)	165, 323, 1238, 1738
BmsI	GCATC	5 cut(s)	13, 357, 621, 658, 1615
BpmI	CTGGAG	1 cut(s)	1753
BpuMI	CCSGG	3 cut(s)	165, 323, 1738
BsaAI	YACGTR	2 cut(s)	289, 336
BsaJI	CCNNGG	6 cut(s)	30, 93, 164, 184, 399, 971
BsaWI	WCCGGW	3 cut(s)	140, 878, 1259
BsaXI	ACNNNNNCTCC	2 cut(s)	372, 402
Bsc4I	CCNNNNNNNGG	6 cut(s)	42, 209, 336, 352, 943, 1724
Bse118I	RCCGGY	2 cut(s)	878, 1259
Bse1I	ACTGG	5 cut(s)	52, 635, 837, 1182, 1788
Bse21I	CCTNAGG	2 cut(s)	224, 1830
Bse3DI	GCAATG	3 cut(s)	891, 1063, 1406
BseAI	TCCGGA	1 cut(s)	140
BseBI	CCWGG	1 cut(s)	1238
BseDI	CCNNGG	6 cut(s)	30, 93, 164, 184, 399, 971
BseGI	GGATG	7 cut(s)	184, 472, 538, 589, 792, 1081, 1763
BseLI	CCNNNNNNNGG	6 cut(s)	42, 209, 336, 352, 943, 1724
BseMI	GCAATG	3 cut(s)	891, 1063, 1406
BseMII	CTCAG	2 cut(s)	238, 288
BseNI	ACTGG	5 cut(s)	52, 635, 837, 1182, 1788
BseRI	GAGGAG	2 cut(s)	393, 571
BseXI	GCAGC	6 cut(s)	602, 932, 1029, 1368, 1391, 1394
BseYI	CCCAGC	1 cut(s)	438
Bsh1236I	CGCG	1 cut(s)	727
Bsh1285I	CGRYCG	3 cut(s)	513, 1755, 1851
BshFI	GGCC	2 cut(s)	35, 1694
BshNI	GGYRCC	1 cut(s)	1262
BshTI	ACCGGT	2 cut(s)	878, 1259
BsiEI	CGRYCG	3 cut(s)	513, 1755, 1851
BsiHKAI	GWGCWC	1 cut(s)	318
BsiSI	CCGG	6 cut(s)	141, 164, 323, 879, 1260, 1738
BslFI	GGGAC	4 cut(s)	59, 107, 174, 1634
BslI	CCNNNNNNNGG	6 cut(s)	42, 209, 336, 352, 943, 1724
BsmAI	GTCTC	2 cut(s)	70, 442
BsmBI	CGTCTC	1 cut(s)	70
BsmFI	GGGAC	4 cut(s)	59, 107, 174, 1634
BsmI	GAATGC	1 cut(s)	1880
BsnI	GGCC	2 cut(s)	35, 1694
Bsp1286I	GDGCHC	2 cut(s)	93, 318
Bsp13I	TCCGGA	1 cut(s)	140
Bsp143I	GATC	9 cut(s)	168, 510, 799, 1095, 1272, 1311, 1752, 1848, 1855
BspACI	CCGC	6 cut(s)	119, 158, 340, 471, 725, 1619
BspANI	GGCC	2 cut(s)	35, 1694
BspCNI	CTCAG	2 cut(s)	237, 289
BspEI	TCCGGA	1 cut(s)	140
BspFNI	CGCG	1 cut(s)	727
BspHI	TCATGA	1 cut(s)	814
BspLI	GGNNCC	6 cut(s)	123, 162, 344, 1182, 1264, 1525
BspPI	GGATC	4 cut(s)	176, 1090, 1280, 1319
BspQI	GCTCTTC	2 cut(s)	65, 306
BspT107I	GGYRCC	1 cut(s)	1262
BsrBI	CCGCTC	1 cut(s)	1619
BsrDI	GCAATG	3 cut(s)	891, 1063, 1406
BsrFI	RCCGGY	2 cut(s)	878, 1259
BsrI	ACTGG	5 cut(s)	52, 635, 837, 1182, 1788
BssAI	RCCGGY	2 cut(s)	878, 1259
BssECI	CCNNGG	6 cut(s)	30, 93, 164, 184, 399, 971
BssMI	GATC	9 cut(s)	168, 510, 799, 1095, 1272, 1311, 1752, 1848, 1855
BssT1I	CCWWGG	1 cut(s)	399
Bst2UI	CCWGG	1 cut(s)	1238
Bst4CI	ACNGT	2 cut(s)	188, 212
Bst6I	CTCTTC	3 cut(s)	65, 306, 368
BstBAI	YACGTR	2 cut(s)	289, 336
BstC8I	GCNNGC	1 cut(s)	673
BstDEI	CTNAG	3 cut(s)	224, 297, 1830
BstDSI	CCRYGG	3 cut(s)	30, 93, 184
BstEII	GGTNACC	1 cut(s)	325
BstF5I	GGATG	7 cut(s)	184, 472, 538, 589, 792, 1081, 1763
BstFNI	CGCG	1 cut(s)	727
BstHHI	GCGC	2 cut(s)	729, 1467
BstKTI	GATC	9 cut(s)	171, 513, 802, 1098, 1275, 1314, 1755, 1851, 1858
BstMAI	GTCTC	2 cut(s)	70, 442
BstMBI	GATC	9 cut(s)	168, 510, 799, 1095, 1272, 1311, 1752, 1848, 1855
BstMCI	CGRYCG	3 cut(s)	513, 1755, 1851
BstMWI	GCNNNNNNNGC	5 cut(s)	32, 640, 830, 1625, 1634
BstNI	CCWGG	1 cut(s)	1238
BstNSI	RCATGY	1 cut(s)	1052
BstPI	GGTNACC	1 cut(s)	325
BstSCI	CCNGG	4 cut(s)	163, 321, 1236, 1736
BstUI	CGCG	1 cut(s)	727
BstV1I	GCAGC	6 cut(s)	602, 932, 1029, 1368, 1391, 1394
BstX2I	RGATCY	3 cut(s)	168, 1095, 1272
BstXI	CCANNNNNNTGG	1 cut(s)	1252
BstYI	RGATCY	3 cut(s)	168, 1095, 1272
Bsu36I	CCTNAGG	2 cut(s)	224, 1830
BsuI	GTATCC	2 cut(s)	499, 1249
BsuRI	GGCC	2 cut(s)	35, 1694
BtgI	CCRYGG	3 cut(s)	30, 93, 184
BtgZI	GCGATG	1 cut(s)	579
BtsCI	GGATG	7 cut(s)	184, 472, 538, 589, 792, 1081, 1763
BtsIMutI	CAGTG	4 cut(s)	271, 552, 642, 936
Cac8I	GCNNGC	1 cut(s)	673
CciI	TCATGA	1 cut(s)	814
CfoI	GCGC	2 cut(s)	729, 1467
Cfr10I	RCCGGY	2 cut(s)	878, 1259
Cfr13I	GGNCC	4 cut(s)	121, 161, 1180, 1692
Csp6I	GTAC	4 cut(s)	286, 616, 1195, 1263
CspAI	ACCGGT	2 cut(s)	878, 1259
CviAII	CATG	9 cut(s)	277, 699, 815, 1049, 1429, 1470, 1682, 1775, 1859
CviQI	GTAC	4 cut(s)	286, 616, 1195, 1263
DdeI	CTNAG	3 cut(s)	224, 297, 1830
DpnI	GATC	9 cut(s)	170, 512, 801, 1097, 1274, 1313, 1754, 1850, 1857
DpnII	GATC	9 cut(s)	168, 510, 799, 1095, 1272, 1311, 1752, 1848, 1855
DriI	GACNNNNNGTC	2 cut(s)	1646, 1729
EaeI	YGGCCR	1 cut(s)	33
Eam1104I	CTCTTC	3 cut(s)	65, 306, 368
Eam1105I	GACNNNNNGTC	2 cut(s)	1646, 1729
EarI	CTCTTC	3 cut(s)	65, 306, 368
Eco130I	CCWWGG	1 cut(s)	399
Eco24I	GRGCYC	1 cut(s)	93
Eco47I	GGWCC	3 cut(s)	121, 161, 1180
Eco57I	CTGAAG	3 cut(s)	157, 392, 623
Eco72I	CACGTG	1 cut(s)	336
Eco81I	CCTNAGG	2 cut(s)	224, 1830
Eco91I	GGTNACC	1 cut(s)	325
EcoO65I	GGTNACC	1 cut(s)	325
EcoRI	GAATTC	3 cut(s)	785, 872, 1087
EcoRII	CCWGG	1 cut(s)	1236
EcoT14I	CCWWGG	1 cut(s)	399
EcoT38I	GRGCYC	1 cut(s)	93
ErhI	CCWWGG	1 cut(s)	399
Esp3I	CGTCTC	1 cut(s)	70
FaeI	CATG	9 cut(s)	280, 702, 818, 1052, 1432, 1473, 1685, 1778, 1862
FaqI	GGGAC	4 cut(s)	59, 107, 174, 1634
FatI	CATG	9 cut(s)	276, 698, 814, 1048, 1428, 1469, 1681, 1774, 1858
FauI	CCCGC	1 cut(s)	151
FauNDI	CATATG	1 cut(s)	1423
FbaI	TGATCA	1 cut(s)	799
Fnu4HI	GCNGC	7 cut(s)	591, 921, 1043, 1357, 1380, 1383, 1620
FokI	GGATG	7 cut(s)	191, 479, 545, 596, 779, 1088, 1750
FriOI	GRGCYC	1 cut(s)	93
Fsp4HI	GCNGC	7 cut(s)	591, 921, 1043, 1357, 1380, 1383, 1620
FspAI	RTGCGCAY	1 cut(s)	1466
FspBI	CTAG	3 cut(s)	11, 426, 939
FspI	TGCGCA	1 cut(s)	1466
GlaI	GCGC	2 cut(s)	728, 1466
GluI	GCNGC	7 cut(s)	591, 921, 1043, 1357, 1380, 1383, 1620
GsaI	CCCAGC	1 cut(s)	442
GsuI	CTGGAG	1 cut(s)	1753
HaeIII	GGCC	2 cut(s)	35, 1694
HapII	CCGG	6 cut(s)	141, 164, 323, 879, 1260, 1738
HhaI	GCGC	2 cut(s)	729, 1467
Hin1II	CATG	9 cut(s)	280, 702, 818, 1052, 1432, 1473, 1685, 1778, 1862
Hin6I	GCGC	2 cut(s)	727, 1465
HinP1I	GCGC	2 cut(s)	727, 1465
HincII	GTYRAC	2 cut(s)	6, 1734
HindII	GTYRAC	2 cut(s)	6, 1734
HindIII	AAGCTT	3 cut(s)	866, 1107, 1698
HinfI	GANTC	6 cut(s)	542, 755, 811, 1601, 1748, 1869
HpaII	CCGG	6 cut(s)	141, 164, 323, 879, 1260, 1738
HphI	GGTGA	6 cut(s)	337, 415, 485, 584, 868, 1447
Hpy166II	GTNNAC	6 cut(s)	6, 476, 934, 1134, 1175, 1734
Hpy188I	TCNGA	5 cut(s)	347, 1093, 1324, 1528, 1757
Hpy188III	TCNNGA	7 cut(s)	11, 124, 141, 364, 514, 815, 1001
Hpy8I	GTNNAC	6 cut(s)	6, 476, 934, 1134, 1175, 1734
Hpy99I	CGWCG	3 cut(s)	113, 130, 1856
HpyAV	CCTTC	6 cut(s)	107, 147, 511, 1038, 1194, 1735
HpyCH4III	ACNGT	2 cut(s)	188, 212
HpyCH4IV	ACGT	2 cut(s)	288, 335
HpyCH4V	TGCA	9 cut(s)	199, 590, 707, 884, 920, 1379, 1565, 1571, 1628
HpyF10VI	GCNNNNNNNGC	5 cut(s)	32, 640, 830, 1625, 1634
HpyF3I	CTNAG	3 cut(s)	224, 297, 1830
HpySE526I	ACGT	2 cut(s)	288, 335
Hsp92II	CATG	9 cut(s)	280, 702, 818, 1052, 1432, 1473, 1685, 1778, 1862
HspAI	GCGC	2 cut(s)	727, 1465
Kpn2I	TCCGGA	1 cut(s)	140
KpnI	GGTACC	1 cut(s)	1266
Ksp22I	TGATCA	1 cut(s)	799
Kzo9I	GATC	9 cut(s)	168, 510, 799, 1095, 1272, 1311, 1752, 1848, 1855
LguI	GCTCTTC	2 cut(s)	65, 306
LmnI	GCTCC	2 cut(s)	1030, 1616
Lsp1109I	GCAGC	6 cut(s)	602, 932, 1029, 1368, 1391, 1394
LweI	GCATC	5 cut(s)	13, 357, 621, 658, 1615
MaeI	CTAG	3 cut(s)	11, 426, 939
MaeII	ACGT	2 cut(s)	288, 335
MaeIII	GTNAC	3 cut(s)	212, 325, 1541
MalI	GATC	9 cut(s)	170, 512, 801, 1097, 1274, 1313, 1754, 1850, 1857
MbiI	CCGCTC	1 cut(s)	1619
MboI	GATC	9 cut(s)	168, 510, 799, 1095, 1272, 1311, 1752, 1848, 1855
MfeI	CAATTG	1 cut(s)	915
MflI	RGATCY	3 cut(s)	168, 1095, 1272
MhlI	GDGCHC	2 cut(s)	93, 318
MmeI	TCCRAC	5 cut(s)	370, 483, 754, 935, 1804
MroI	TCCGGA	1 cut(s)	140
MroXI	GAANNNNTTC	1 cut(s)	785
MseI	TTAA	6 cut(s)	249, 627, 692, 765, 1199, 1301
MslI	CAYNNNNRTG	5 cut(s)	401, 962, 1433, 1550, 1812
MspI	CCGG	6 cut(s)	141, 164, 323, 879, 1260, 1738
MspR9I	CCNGG	4 cut(s)	165, 323, 1238, 1738
MunI	CAATTG	1 cut(s)	915
Mva1269I	GAATGC	1 cut(s)	1880
MvaI	CCWGG	1 cut(s)	1238
MvnI	CGCG	1 cut(s)	727
MwoI	GCNNNNNNNGC	5 cut(s)	32, 640, 830, 1625, 1634
NciI	CCSGG	3 cut(s)	165, 323, 1738
NdeI	CATATG	1 cut(s)	1423
NdeII	GATC	9 cut(s)	168, 510, 799, 1095, 1272, 1311, 1752, 1848, 1855
NlaIII	CATG	9 cut(s)	280, 702, 818, 1052, 1432, 1473, 1685, 1778, 1862
NlaIV	GGNNCC	6 cut(s)	123, 162, 344, 1182, 1264, 1525
NmuCI	GTSAC	2 cut(s)	212, 325
NsbI	TGCGCA	1 cut(s)	1466
NspI	RCATGY	1 cut(s)	1052
OliI	CACNNNNGTG	1 cut(s)	401
PagI	TCATGA	1 cut(s)	814
PciI	ACATGT	1 cut(s)	1048
PciSI	GCTCTTC	2 cut(s)	65, 306
PcsI	WCGNNNNNNNCGW	1 cut(s)	27
PctI	GAATGC	1 cut(s)	1880
PdmI	GAANNNNTTC	1 cut(s)	785
PfeI	GAWTC	6 cut(s)	542, 755, 811, 1601, 1748, 1869
PflMI	CCANNNNNTGG	1 cut(s)	336
PinAI	ACCGGT	2 cut(s)	878, 1259
PkrI	GCNGC	7 cut(s)	592, 922, 1044, 1358, 1381, 1384, 1621
Ple19I	CGATCG	3 cut(s)	513, 1755, 1851
PmaCI	CACGTG	1 cut(s)	336
PmlI	CACGTG	1 cut(s)	336
Ppu21I	YACGTR	2 cut(s)	289, 336
PscI	ACATGT	1 cut(s)	1048
PsiI	TTATAA	2 cut(s)	660, 996
Psp6I	CCWGG	1 cut(s)	1236
PspCI	CACGTG	1 cut(s)	336
PspEI	GGTNACC	1 cut(s)	325
PspFI	CCCAGC	1 cut(s)	438
PspGI	CCWGG	1 cut(s)	1236
PspN4I	GGNNCC	6 cut(s)	123, 162, 344, 1182, 1264, 1525
PspPI	GGNCC	4 cut(s)	121, 161, 1180, 1692
PsuI	RGATCY	3 cut(s)	168, 1095, 1272
PvuI	CGATCG	3 cut(s)	513, 1755, 1851
RsaI	GTAC	4 cut(s)	287, 617, 1196, 1264
RsaNI	GTAC	4 cut(s)	286, 616, 1195, 1263
RseI	CAYNNNNRTG	5 cut(s)	401, 962, 1433, 1550, 1812
SapI	GCTCTTC	2 cut(s)	65, 306
SaqAI	TTAA	6 cut(s)	249, 627, 692, 765, 1199, 1301
SatI	GCNGC	7 cut(s)	591, 921, 1043, 1357, 1380, 1383, 1620
Sau3AI	GATC	9 cut(s)	168, 510, 799, 1095, 1272, 1311, 1752, 1848, 1855
Sau96I	GGNCC	4 cut(s)	121, 161, 1180, 1692
ScrFI	CCNGG	4 cut(s)	165, 323, 1238, 1738
SduI	GDGCHC	2 cut(s)	93, 318
SfaNI	GCATC	5 cut(s)	13, 357, 621, 658, 1615
SgrAI	CRCCGGYG	1 cut(s)	878
SinI	GGWCC	3 cut(s)	121, 161, 1180
SmiMI	CAYNNNNRTG	5 cut(s)	401, 962, 1433, 1550, 1812
SpeI	ACTAGT	1 cut(s)	425
SsiI	CCGC	6 cut(s)	119, 158, 340, 471, 725, 1619
SspMI	CTAG	3 cut(s)	11, 426, 939
StyD4I	CCNGG	4 cut(s)	163, 321, 1236, 1736
StyI	CCWWGG	1 cut(s)	399
TaaI	ACNGT	2 cut(s)	188, 212
TaiI	ACGT	2 cut(s)	291, 338
TatI	WGTACW	1 cut(s)	1194
TauI	GCSGC	1 cut(s)	1622
TfiI	GAWTC	6 cut(s)	542, 755, 811, 1601, 1748, 1869
Tru1I	TTAA	6 cut(s)	249, 627, 692, 765, 1199, 1301
Tru9I	TTAA	6 cut(s)	249, 627, 692, 765, 1199, 1301
TscAI	CASTG	4 cut(s)	271, 552, 642, 936
TseFI	GTSAC	2 cut(s)	212, 325
TseI	GCWGC	6 cut(s)	590, 920, 1042, 1356, 1379, 1382
Tsp45I	GTSAC	2 cut(s)	212, 325
TspGWI	ACGGA	3 cut(s)	19, 143, 633
TspRI	CASTG	4 cut(s)	271, 552, 642, 936
Van91I	CCANNNNNTGG	1 cut(s)	336
VpaK11BI	GGWCC	3 cut(s)	121, 161, 1180
XapI	RAATTY	6 cut(s)	749, 760, 785, 872, 1087, 1663
XbaI	TCTAGA	1 cut(s)	10
XceI	RCATGY	1 cut(s)	1052
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1305
XmnI	GAANNNNTTC	1 cut(s)	785
XspI	CTAG	3 cut(s)	11, 426, 939

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.