Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0001225

Physical Location & Seq

Genomic Coordinates Reverse (-)

28257419 .. 28261282

Gene Structure 3864 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00307180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1044 bp

ATGCAAGCCAATCCCTTCCAATTCACTGCCAAATCAATATTCCCGTCACTGATAAACATACCTACGGTGCACCGACAGCACCGTTCTCCTTCTCTGCCACTCCTCCTCAAACCGCCACGTGCAATCTCCGCTTCTACTCCCAATGACGCCGAGAGTTCTACTCCAATTACCATGTCAACCCTAGAAGTTGTCGATGACTCCGTGGCTGCGTTCCGGGACTACCAGTTTCTCTTTGTCTCGCAACGCTCGGAAACAAACGAGCCAGTGACTCTACAAGTTGTTGAAGGTGCAGTCCCGCCAGAGTTTCCTTCCGGAACATATTACTTGACGGGACCGGGGCTCTTCAGAGACGACCACGGCTCAACGGTGCACCCTTTGGATGGTCACGGCTACCTTAGGGCTTTCACTTTCCATGGGGTCAGTGGGAAAGAGGTCAATGTCATGTTCATGGCCAAGTATGTGAAAACTGAGGCGCAGTTGGAAGAGCACGACCCCGTGACCGGTACGTGGCGGTTCACGAATGGAGGAGCGTTCTCGGTGTTGAAGGGAGGACAGAAAGTCGGGAACACTAAAGTGATCAAAAACGTGGCGAATACTTGTGTGTTGAGCTGGGGTGGGAGGCTGATGTGCTTGTGGGAAGGTGGTGGAGAACCTTACGAAATTGAAAAGAAGACCTTGGAAACTGTGGGGAAGGTCAAGCTCATGGAAGGTTGCGATCCGGTGGTGGAGAGTGGGAGTGATGGCCGTGGTGTTTGGGATGTTGCTGCAAGATTGTTGAAGCCGATTTTGTATGAATTTGATTCAAATTTTAAGGAGGTGGGAAAGAAGGAGTTCATCATCCCAGATCACTTGTTCATTCATGATTGGGCTTTCACAACCACTTATTATATACTATTTGCTAACCGGGTTAAACTTAATGCTTCTGGTAATTACGTCAGGATAAACACTAAAATGGCTGGGAACCTTGACCACGAGGGTCACCGAATTTACGACAACCGTAGCATAGATGGCGACGAGCGCCTGAAGAGAAACCTGTGCGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001763 GO:0003674 GO:0003824 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008300 GO:0008610 GO:0009056 GO:0009058 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009987 GO:0010016 GO:0010033 GO:0010223 GO:0010346 GO:0010436 GO:0010817 GO:0016042 GO:0016106 GO:0016114 GO:0016119 GO:0016121 GO:0016491 GO:0016701 GO:0016702 GO:0018130 GO:0032501 GO:0032502 GO:0042214 GO:0042221 GO:0042445 GO:0042446 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0045549 GO:0046247 GO:0046483 GO:0048367 GO:0048646 GO:0048731 GO:0048856 GO:0050896 GO:0051213 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:1901334 GO:1901336 GO:1901360 GO:1901362 GO:1901575 GO:1901576 GO:1901600 GO:1901601 GO:1905393

KEGG Pathways

Metabolic & Signaling

ko00906 map00906

Pfam Domains

Protein Families

RPE65

Protein Analysis

347

Amino Acids

38.62

Weight (kDa)

6.42

Isoelectric Point (pI)

29.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPE65	PF03055	79 - 309	2.6e-35	Retinal pigment epithelial membrane protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001225)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44990 AT2G44990 AT2G44990
fragaria_vesca	FvH4_7g10450
malus_domestica	MD07G1110600.v1.1
prunus_persica	Prupe.2G133900_v2.0.a1
pyrus_communis	pycom07g09530
rosa_chinensis	RchiOBHm_Chr1g0342921 RchiOBHm_Chr1g0342931 RchiOBHm_Chr1g0348141 RchiOBHm_Chr1g0348171 RchiOBHm_Chr1g0348201 RchiOBHm_Chr2g0136091 RchiOBHm_Chr7g0229961
rosa_laevigata	RLG00000028678 RLG00000028682 RLG00000028684 RLG00000028685 RLG00000028686
rosa_multiflora	Rmu_co8414565.1_g000001 Rmu_co8499605.1_g000001 Rmu_sc0001563.1_g000031 Rmu_sc0001890.1_g000013 Rmu_sc0001890.1_g000015 Rmu_sc0002209.1_g000017 Rmu_sc0003991.1_g000009 Rmu_sc0004502.1_g000011 Rmu_sc0004502.1_g000018 Rmu_sc0005046.1_g000018
rosa_roxburghii	Rroxscaffold_4G00307110 Rroxscaffold_4G00307160 Rroxscaffold_4G00307170 Rroxscaffold_4G00307180
rosa_rugosa	Rorug01G0145700.1 Rorug01G0192700 Rorug01G0192900 Rorug01G0193500
rosa_samantha	Rh1AG095900 Rh1AG210700 Rh1AG210800 Rh1BG176200 Rh1BG176800 Rh1BG177100 Rh1BG177200 Rh1CG195000 Rh1CG195100 Rh1DG205900 Rh1DG206300 Rh1DG206600 Rh1DG206700 Rh3DG305500
rosa_wichuraiana	Rw0G011410 Rw1G017570 Rw1G017580 Rw1G017590 Rw1G017800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccIII	TCCGGA	1 cut(s)	311
AciI	CCGC	5 cut(s)	113, 129, 296, 511, 1038
AclWI	GGATC	1 cut(s)	710
AcoI	YGGCCR	2 cut(s)	450, 742
AcsI	RAATTY	3 cut(s)	794, 805, 984
AcuI	CTGAAG	2 cut(s)	328, 1043
AcvI	CACGTG	1 cut(s)	119
AcyI	GRCGYC	1 cut(s)	147
AfaI	GTAC	1 cut(s)	505
AfiI	CCNNNNNNNGG	3 cut(s)	380, 500, 507
AgeI	ACCGGT	1 cut(s)	500
AgsI	TTSAA	5 cut(s)	284, 544, 665, 778, 804
AhdI	GACNNNNNGTC	1 cut(s)	557
AjuI	GAANNNNNNNTTGG	2 cut(s)	23, 55
AleI	CACNNNNGTG	1 cut(s)	572
AluBI	AGCT	2 cut(s)	609, 700
AluI	AGCT	2 cut(s)	609, 700
Alw21I	GWGCWC	3 cut(s)	72, 372, 489
Alw26I	GTCTC	2 cut(s)	241, 342
Alw44I	GTGCAC	2 cut(s)	68, 368
AlwI	GGATC	1 cut(s)	710
Aor13HI	TCCGGA	1 cut(s)	311
AoxI	GGCC	2 cut(s)	450, 742
ApaLI	GTGCAC	2 cut(s)	68, 368
ApeKI	GCWGC	2 cut(s)	206, 764
ApoI	RAATTY	3 cut(s)	794, 805, 984
AsiGI	ACCGGT	1 cut(s)	500
Asp700I	GAANNNNTTC	1 cut(s)	830
AspLEI	GCGC	2 cut(s)	475, 1020
AspS9I	GGNCC	1 cut(s)	332
AsuC2I	CCSGG	3 cut(s)	215, 336, 905
AsuHPI	GGTGA	1 cut(s)	971
AvaII	GGWCC	1 cut(s)	332
AxyI	CCTNAGG	1 cut(s)	395
BaeGI	GKGCMC	2 cut(s)	72, 372
BalI	TGGCCA	1 cut(s)	452
BanII	GRGCYC	1 cut(s)	342
BauI	CACGAG	1 cut(s)	971
BbrPI	CACGTG	1 cut(s)	119
BbsI	GAAGAC	1 cut(s)	677
Bbv12I	GWGCWC	3 cut(s)	72, 372, 489
BbvI	GCAGC	2 cut(s)	193, 751
BccI	CCATC	3 cut(s)	374, 734, 1001
BceAI	ACGGC	3 cut(s)	373, 403, 729
BclI	TGATCA	1 cut(s)	576
BcnI	CCSGG	3 cut(s)	215, 336, 905
BcoDI	GTCTC	2 cut(s)	241, 342
BfaI	CTAG	2 cut(s)	182, 1042
BfoI	RGCGCY	1 cut(s)	1021
BisI	GCNGC	3 cut(s)	207, 765, 1039
BlsI	GCNGC	3 cut(s)	208, 766, 1040
Bme1390I	CCNGG	3 cut(s)	215, 336, 905
Bme18I	GGWCC	1 cut(s)	332
BmeRI	GACNNNNNGTC	1 cut(s)	557
BmgT120I	GGNCC	1 cut(s)	332
BmiI	GGNNCC	2 cut(s)	333, 962
BmrFI	CCNGG	3 cut(s)	215, 336, 905
BpiI	GAAGAC	1 cut(s)	677
BplI	GAGNNNNNCTC	2 cut(s)	145, 177
BpuMI	CCSGG	3 cut(s)	215, 336, 905
BsaAI	YACGTR	2 cut(s)	119, 507
BsaHI	GRCGYC	1 cut(s)	147
BsaJI	CCNNGG	6 cut(s)	201, 335, 355, 412, 675, 745
BsaWI	WCCGGW	3 cut(s)	311, 500, 718
Bsc4I	CCNNNNNNNGG	3 cut(s)	380, 500, 507
Bse118I	RCCGGY	1 cut(s)	500
Bse1I	ACTGG	2 cut(s)	223, 263
Bse21I	CCTNAGG	1 cut(s)	395
BseAI	TCCGGA	1 cut(s)	311
BseDI	CCNNGG	6 cut(s)	201, 335, 355, 412, 675, 745
BseGI	GGATG	3 cut(s)	385, 763, 837
BseLI	CCNNNNNNNGG	3 cut(s)	380, 500, 507
BseMII	CTCAG	1 cut(s)	459
BseNI	ACTGG	2 cut(s)	223, 263
BseRI	GAGGAG	3 cut(s)	92, 95, 540
BseSI	GKGCMC	2 cut(s)	72, 372
BseXI	GCAGC	2 cut(s)	193, 751
BseYI	CCCAGC	2 cut(s)	609, 956
BsgI	GTGCAG	1 cut(s)	309
BshFI	GGCC	2 cut(s)	452, 744
BshTI	ACCGGT	1 cut(s)	500
BsiHKAI	GWGCWC	3 cut(s)	72, 372, 489
BsiSI	CCGG	6 cut(s)	214, 312, 335, 501, 719, 904
BslFI	GGGAC	3 cut(s)	230, 278, 345
BslI	CCNNNNNNNGG	3 cut(s)	380, 500, 507
BsmAI	GTCTC	2 cut(s)	241, 342
BsmBI	CGTCTC	1 cut(s)	342
BsmFI	GGGAC	3 cut(s)	230, 278, 345
BsnI	GGCC	2 cut(s)	452, 744
Bsp1286I	GDGCHC	4 cut(s)	72, 342, 372, 489
Bsp13I	TCCGGA	1 cut(s)	311
Bsp143I	GATC	3 cut(s)	576, 715, 844
Bsp19I	CCATGG	1 cut(s)	412
BspACI	CCGC	5 cut(s)	113, 129, 296, 511, 1038
BspANI	GGCC	2 cut(s)	452, 744
BspCNI	CTCAG	1 cut(s)	460
BspEI	TCCGGA	1 cut(s)	311
BspHI	TCATGA	1 cut(s)	859
BspLI	GGNNCC	2 cut(s)	333, 962
BspPI	GGATC	1 cut(s)	710
BspQI	GCTCTTC	2 cut(s)	347, 477
BsrFI	RCCGGY	1 cut(s)	500
BsrI	ACTGG	2 cut(s)	223, 263
BssAI	RCCGGY	1 cut(s)	500
BssECI	CCNNGG	6 cut(s)	201, 335, 355, 412, 675, 745
BssMI	GATC	3 cut(s)	576, 715, 844
BssNI	GRCGYC	1 cut(s)	147
BssSI	CACGAG	1 cut(s)	971
BssT1I	CCWWGG	2 cut(s)	412, 675
Bst2BI	CACGAG	1 cut(s)	971
Bst4CI	ACNGT	5 cut(s)	67, 83, 367, 685, 998
Bst6I	CTCTTC	3 cut(s)	347, 477, 1019
BstACI	GRCGYC	1 cut(s)	147
BstBAI	YACGTR	2 cut(s)	119, 507
BstC8I	GCNNGC	1 cut(s)	6
BstDEI	CTNAG	2 cut(s)	395, 468
BstDSI	CCRYGG	4 cut(s)	201, 355, 412, 745
BstEII	GGTNACC	1 cut(s)	977
BstF5I	GGATG	3 cut(s)	385, 763, 837
BstH2I	RGCGCY	1 cut(s)	1021
BstHHI	GCGC	2 cut(s)	475, 1020
BstKTI	GATC	3 cut(s)	579, 718, 847
BstMAI	GTCTC	2 cut(s)	241, 342
BstMBI	GATC	3 cut(s)	576, 715, 844
BstMWI	GCNNNNNNNGC	4 cut(s)	76, 128, 1008, 1017
BstPI	GGTNACC	1 cut(s)	977
BstSCI	CCNGG	3 cut(s)	213, 334, 903
BstSLI	GKGCMC	2 cut(s)	72, 372
BstV1I	GCAGC	2 cut(s)	193, 751
BstV2I	GAAGAC	1 cut(s)	677
Bsu36I	CCTNAGG	1 cut(s)	395
BsuRI	GGCC	2 cut(s)	452, 744
BtgI	CCRYGG	4 cut(s)	201, 355, 412, 745
BtsCI	GGATG	3 cut(s)	385, 763, 837
BtsI	GCAGTG	1 cut(s)	24
BtsIMutI	CAGTG	4 cut(s)	24, 47, 270, 427
Cac8I	GCNNGC	1 cut(s)	6
CciI	TCATGA	1 cut(s)	859
CfoI	GCGC	2 cut(s)	475, 1020
Cfr10I	RCCGGY	1 cut(s)	500
Cfr13I	GGNCC	1 cut(s)	332
CseI	GACGC	1 cut(s)	155
Csp6I	GTAC	1 cut(s)	504
CspAI	ACCGGT	1 cut(s)	500
CviAII	CATG	6 cut(s)	172, 413, 442, 448, 703, 860
CviQI	GTAC	1 cut(s)	504
DdeI	CTNAG	2 cut(s)	395, 468
DpnI	GATC	3 cut(s)	578, 717, 846
DpnII	GATC	3 cut(s)	576, 715, 844
DriI	GACNNNNNGTC	1 cut(s)	557
EaeI	YGGCCR	2 cut(s)	450, 742
Eam1104I	CTCTTC	3 cut(s)	347, 477, 1019
Eam1105I	GACNNNNNGTC	1 cut(s)	557
EarI	CTCTTC	3 cut(s)	347, 477, 1019
Eco130I	CCWWGG	2 cut(s)	412, 675
Eco24I	GRGCYC	1 cut(s)	342
Eco47I	GGWCC	1 cut(s)	332
Eco57I	CTGAAG	2 cut(s)	328, 1043
Eco72I	CACGTG	1 cut(s)	119
Eco81I	CCTNAGG	1 cut(s)	395
Eco91I	GGTNACC	1 cut(s)	977
EcoO65I	GGTNACC	1 cut(s)	977
EcoT14I	CCWWGG	2 cut(s)	412, 675
EcoT38I	GRGCYC	1 cut(s)	342
ErhI	CCWWGG	2 cut(s)	412, 675
Esp3I	CGTCTC	1 cut(s)	342
FaeI	CATG	6 cut(s)	175, 416, 445, 451, 706, 863
FalI	AAGNNNNNCTT	2 cut(s)	659, 691
FaqI	GGGAC	3 cut(s)	230, 278, 345
FatI	CATG	6 cut(s)	171, 412, 441, 447, 702, 859
FauI	CCCGC	1 cut(s)	303
FbaI	TGATCA	1 cut(s)	576
Fnu4HI	GCNGC	3 cut(s)	207, 765, 1039
FokI	GGATG	3 cut(s)	392, 770, 824
FriOI	GRGCYC	1 cut(s)	342
Fsp4HI	GCNGC	3 cut(s)	207, 765, 1039
FspBI	CTAG	2 cut(s)	182, 1042
GlaI	GCGC	2 cut(s)	474, 1019
GluI	GCNGC	3 cut(s)	207, 765, 1039
GsaI	CCCAGC	2 cut(s)	613, 960
HaeII	RGCGCY	1 cut(s)	1021
HaeIII	GGCC	2 cut(s)	452, 744
HapII	CCGG	6 cut(s)	214, 312, 335, 501, 719, 904
HgaI	GACGC	1 cut(s)	155
HhaI	GCGC	2 cut(s)	475, 1020
Hin1I	GRCGYC	1 cut(s)	147
Hin1II	CATG	6 cut(s)	175, 416, 445, 451, 706, 863
Hin6I	GCGC	2 cut(s)	473, 1018
HinP1I	GCGC	2 cut(s)	473, 1018
HincII	GTYRAC	1 cut(s)	177
HindII	GTYRAC	1 cut(s)	177
HinfI	GANTC	3 cut(s)	197, 268, 800
HpaII	CCGG	6 cut(s)	214, 312, 335, 501, 719, 904
HphI	GGTGA	1 cut(s)	971
Hpy166II	GTNNAC	4 cut(s)	70, 177, 370, 516
Hpy188I	TCNGA	2 cut(s)	250, 347
Hpy188III	TCNNGA	5 cut(s)	312, 517, 562, 860, 937
Hpy8I	GTNNAC	4 cut(s)	70, 177, 370, 516
Hpy99I	CGWCG	1 cut(s)	1016
HpyAV	CCTTC	9 cut(s)	25, 99, 278, 318, 538, 632, 685, 701, 820
HpyCH4III	ACNGT	5 cut(s)	67, 83, 367, 685, 998
HpyCH4IV	ACGT	4 cut(s)	118, 506, 585, 933
HpyCH4V	TGCA	6 cut(s)	4, 70, 122, 290, 370, 767
HpyF10VI	GCNNNNNNNGC	4 cut(s)	76, 128, 1008, 1017
HpyF3I	CTNAG	2 cut(s)	395, 468
HpySE526I	ACGT	4 cut(s)	118, 506, 585, 933
Hsp92I	GRCGYC	1 cut(s)	147
Hsp92II	CATG	6 cut(s)	175, 416, 445, 451, 706, 863
HspAI	GCGC	2 cut(s)	473, 1018
Kpn2I	TCCGGA	1 cut(s)	311
Ksp22I	TGATCA	1 cut(s)	576
Kzo9I	GATC	3 cut(s)	576, 715, 844
LguI	GCTCTTC	2 cut(s)	347, 477
LmnI	GCTCC	1 cut(s)	527
Lsp1109I	GCAGC	2 cut(s)	193, 751
MaeI	CTAG	2 cut(s)	182, 1042
MaeII	ACGT	4 cut(s)	118, 506, 585, 933
MaeIII	GTNAC	5 cut(s)	45, 265, 383, 496, 977
MalI	GATC	3 cut(s)	578, 717, 846
MboI	GATC	3 cut(s)	576, 715, 844
MboII	GAAGA	4 cut(s)	334, 494, 682, 1036
MhlI	GDGCHC	4 cut(s)	72, 342, 372, 489
MlsI	TGGCCA	1 cut(s)	452
MluCI	AATT	7 cut(s)	20, 165, 660, 794, 805, 928, 984
MluNI	TGGCCA	1 cut(s)	452
MlyI	GAGTC	2 cut(s)	191, 262
MmeI	TCCRAC	1 cut(s)	459
MnlI	CCTC	9 cut(s)	113, 116, 424, 463, 518, 542, 612, 808, 967
Mox20I	TGGCCA	1 cut(s)	452
MroI	TCCGGA	1 cut(s)	311
MroXI	GAANNNNTTC	1 cut(s)	830
MscI	TGGCCA	1 cut(s)	452
MseI	TTAA	3 cut(s)	810, 909, 915
MslI	CAYNNNNRTG	3 cut(s)	446, 572, 950
Msp20I	TGGCCA	1 cut(s)	452
MspI	CCGG	6 cut(s)	214, 312, 335, 501, 719, 904
MspR9I	CCNGG	3 cut(s)	215, 336, 905
MwoI	GCNNNNNNNGC	4 cut(s)	76, 128, 1008, 1017
NciI	CCSGG	3 cut(s)	215, 336, 905
NcoI	CCATGG	1 cut(s)	412
NdeII	GATC	3 cut(s)	576, 715, 844
NlaIII	CATG	6 cut(s)	175, 416, 445, 451, 706, 863
NlaIV	GGNNCC	2 cut(s)	333, 962
NmeAIII	GCCGAG	1 cut(s)	175
NmuCI	GTSAC	5 cut(s)	45, 265, 383, 496, 977
OliI	CACNNNNGTG	1 cut(s)	572
PagI	TCATGA	1 cut(s)	859
PciSI	GCTCTTC	2 cut(s)	347, 477
PcsI	WCGNNNNNNNCGW	1 cut(s)	198
PdmI	GAANNNNTTC	1 cut(s)	830
PfeI	GAWTC	1 cut(s)	800
PfoI	TCCNGGA	1 cut(s)	213
PinAI	ACCGGT	1 cut(s)	500
PkrI	GCNGC	3 cut(s)	208, 766, 1040
PleI	GAGTC	2 cut(s)	191, 262
PmaCI	CACGTG	1 cut(s)	119
PmlI	CACGTG	1 cut(s)	119
PpsI	GAGTC	2 cut(s)	191, 262
Ppu21I	YACGTR	2 cut(s)	119, 507
PspCI	CACGTG	1 cut(s)	119
PspEI	GGTNACC	1 cut(s)	977
PspFI	CCCAGC	2 cut(s)	609, 956
PspN4I	GGNNCC	2 cut(s)	333, 962
PspPI	GGNCC	1 cut(s)	332
RsaI	GTAC	1 cut(s)	505
RsaNI	GTAC	1 cut(s)	504
RseI	CAYNNNNRTG	3 cut(s)	446, 572, 950
SapI	GCTCTTC	2 cut(s)	347, 477
SaqAI	TTAA	3 cut(s)	810, 909, 915
SatI	GCNGC	3 cut(s)	207, 765, 1039
Sau3AI	GATC	3 cut(s)	576, 715, 844
Sau96I	GGNCC	1 cut(s)	332
SchI	GAGTC	2 cut(s)	191, 262
ScrFI	CCNGG	3 cut(s)	215, 336, 905
SduI	GDGCHC	4 cut(s)	72, 342, 372, 489
SinI	GGWCC	1 cut(s)	332
SmiMI	CAYNNNNRTG	3 cut(s)	446, 572, 950
Sse9I	AATT	7 cut(s)	20, 165, 660, 794, 805, 928, 984
SsiI	CCGC	5 cut(s)	113, 129, 296, 511, 1038
SspI	AATATT	1 cut(s)	39
SspMI	CTAG	2 cut(s)	182, 1042
StyD4I	CCNGG	3 cut(s)	213, 334, 903
StyI	CCWWGG	2 cut(s)	412, 675
TaaI	ACNGT	5 cut(s)	67, 83, 367, 685, 998
TaiI	ACGT	4 cut(s)	121, 509, 588, 936
TaqI	TCGA	1 cut(s)	192
TasI	AATT	7 cut(s)	20, 165, 660, 794, 805, 928, 984
TauI	GCSGC	1 cut(s)	1041
TfiI	GAWTC	1 cut(s)	800
Tru1I	TTAA	3 cut(s)	810, 909, 915
Tru9I	TTAA	3 cut(s)	810, 909, 915
TscAI	CASTG	4 cut(s)	31, 54, 270, 427
TseFI	GTSAC	5 cut(s)	45, 265, 383, 496, 977
TseI	GCWGC	2 cut(s)	206, 764
Tsp45I	GTSAC	5 cut(s)	45, 265, 383, 496, 977
TspDTI	ATGAA	5 cut(s)	436, 807, 823, 844, 848
TspGWI	ACGGA	1 cut(s)	190
TspRI	CASTG	4 cut(s)	31, 54, 270, 427
VneI	GTGCAC	2 cut(s)	68, 368
VpaK11BI	GGWCC	1 cut(s)	332
XapI	RAATTY	3 cut(s)	794, 805, 984
XcmI	CCANNNNNNNNNTGG	1 cut(s)	419
XmnI	GAANNNNTTC	1 cut(s)	830
XspI	CTAG	2 cut(s)	182, 1042

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.