Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0001225

Physical Location & Seq

Genomic Coordinates Reverse (-)

28077107 .. 28085947

Gene Structure 8841 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG176200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1434 bp

ATGCAAGCCAATCCCTTCCGAGTCACTGCCAAATCAATATTCCCGTCACTGATAAACATACCTACGGTGCACCGACAGCACCGTTCTCCTTCTTTGCCACCCCTCCTCAAACCGCCATGTGCCATCTCCGCTTCTACTCCCAATGACGCCGAGAGTTCTACTCCAATTACCATGTCAACCCTAGAAGTTGTCGATGACTCCGTGGCTGCGTTCCGGGACTACCAGTTTCTCTTTGTCTCGCAACGCTCGGAAACAAACGAGCCAGTGACTCTACAAGTTGTTGAAGGTGCAGTCCCGCCAGAGTTTCCTTCCGGAACATATTACTTGACGGGACCGGGGCTCTTCAGAGACGACTACGGCTCAACGGTGCACCCTTTCGATGGTCACGGCTACCTTAGGGCTTTCACTTTCCATGGGGTCAATGGGAAAGAGGTCACTGTCATGTTCATGGCCAAGTATGTGAAAACTGAGGCGCAGTTGGAAGAGCACGACCCCGTGACCGGTACGTGGCGGTTCACGCATAGGGGAGCGTTCTCGGTGTTGAAGGGAGGACAGAAAGTCGGGAACACTATGGTGATCAAAAACGTGGCGAATACTTGTGTGTTGAGCTGGGGTGGGAGGCTGATGTGCTTGTGGGAAGGTGGTGGGGAACCTTACGAAATTGAAAAGGAGACCTTGGAAACTGTGGGGAAGGTCAAGCTCATGGAAGAAGATATGCTGTTGCCACACAATAATTTTACTTTTTATGAATTTGATTCAAATTTTAAGGAGGTGGGAAAGAAAGAGTTCATCATCCCAGATCACTTATTCATTCATGATTGGGCTTTCACAACCACTTATTATATACTATTTGCTAACCGCGTTAAACTTAATGTTTCTGGTGCAATGACTTCAGTTTGTGGAATCACTCCAGCGGTGACAGCATTATCTGTGAATCCTACCAAAGACACATCTCCAATATATTTGCTTCCTAGGTTTCCTAATGATGTGAATTGTAGTCGAGATTGGAGAGTACCAATTGAAGCTCCTTCACGATTTTGGCTGCAACATGTAGGCAATGCCTATGATTATTTGAATGAAAATGGGAATTCAGAGATCCAGATACATGCTTCTGTTTGCTCTTACGAGTGGTTCACTTTGCAAAAGTTGTTCGCCATATTGGAGGTATCAGTGGTTGCAAGGCCAGATGAGAAGTGGGGAGAATCTCCTCGTGCTTTTGTGACATTGAAGCGAAGCGTTAATAAGTCCGATGAAAAGCGTGTGGCAGAAGATATAATGAAGTTCTGCAGGGAAAAGATGTCGGCTTATTGGGTTCCCAAATCTGTGGTGTTCGGACCATTACCAAAGACAGCTACTGGGAAGATACAGAAGCATAATTTGCTGAGGGCAAAAGCCAAAGAGGTGGGACGTGTCAGGATGGTGAGCAAGTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001763 GO:0003674 GO:0003824 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008300 GO:0008610 GO:0009056 GO:0009058 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009987 GO:0010016 GO:0010033 GO:0010223 GO:0010346 GO:0010436 GO:0010817 GO:0016042 GO:0016106 GO:0016114 GO:0016119 GO:0016121 GO:0016491 GO:0016701 GO:0016702 GO:0018130 GO:0032501 GO:0032502 GO:0042214 GO:0042221 GO:0042445 GO:0042446 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0045549 GO:0046247 GO:0046483 GO:0048367 GO:0048646 GO:0048731 GO:0048856 GO:0050896 GO:0051213 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:1901334 GO:1901336 GO:1901360 GO:1901362 GO:1901575 GO:1901576 GO:1901600 GO:1901601 GO:1905393

KEGG Pathways

Metabolic & Signaling

ko00906 map00906

Pfam Domains

Protein Families

RPE65

Protein Analysis

477

Amino Acids

53.72

Weight (kDa)

8.05

Isoelectric Point (pI)

36.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPE65	PF03055	79 - 383	1.1e-40	Retinal pigment epithelial membrane protein
AMP-binding_C	PF13193	385 - 454	3.3e-14	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001225)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44990 AT2G44990 AT2G44990
fragaria_vesca	FvH4_7g10450
malus_domestica	MD07G1110600.v1.1
prunus_persica	Prupe.2G133900_v2.0.a1
pyrus_communis	pycom07g09530
rosa_chinensis	RchiOBHm_Chr1g0342921 RchiOBHm_Chr1g0342931 RchiOBHm_Chr1g0348141 RchiOBHm_Chr1g0348171 RchiOBHm_Chr1g0348201 RchiOBHm_Chr2g0136091 RchiOBHm_Chr7g0229961
rosa_laevigata	RLG00000028678 RLG00000028682 RLG00000028684 RLG00000028685 RLG00000028686
rosa_multiflora	Rmu_co8414565.1_g000001 Rmu_co8499605.1_g000001 Rmu_sc0001563.1_g000031 Rmu_sc0001890.1_g000013 Rmu_sc0001890.1_g000015 Rmu_sc0002209.1_g000017 Rmu_sc0003991.1_g000009 Rmu_sc0004502.1_g000011 Rmu_sc0004502.1_g000018 Rmu_sc0005046.1_g000018
rosa_roxburghii	Rroxscaffold_4G00307110 Rroxscaffold_4G00307160 Rroxscaffold_4G00307170 Rroxscaffold_4G00307180
rosa_rugosa	Rorug01G0145700.1 Rorug01G0192700 Rorug01G0192900 Rorug01G0193500
rosa_samantha	Rh1AG095900 Rh1AG210700 Rh1AG210800 Rh1BG176200 Rh1BG176800 Rh1BG177100 Rh1BG177200 Rh1CG195000 Rh1CG195100 Rh1DG205900 Rh1DG206300 Rh1DG206600 Rh1DG206700 Rh3DG305500
rosa_wichuraiana	Rw0G011410 Rw1G017570 Rw1G017580 Rw1G017590 Rw1G017800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1432
AccII	CGCG	1 cut(s)	861
AccIII	TCCGGA	1 cut(s)	311
AciI	CCGC	6 cut(s)	113, 129, 296, 511, 859, 914
AclWI	GGATC	1 cut(s)	1090
AcoI	YGGCCR	1 cut(s)	450
AcsI	RAATTY	3 cut(s)	749, 760, 1087
AcuI	CTGAAG	2 cut(s)	328, 876
AcyI	GRCGYC	1 cut(s)	147
AfaI	GTAC	2 cut(s)	505, 1014
AfiI	CCNNNNNNNGG	3 cut(s)	380, 500, 507
AflIII	ACRYGT	2 cut(s)	1048, 1408
AgeI	ACCGGT	1 cut(s)	500
AgsI	TTSAA	7 cut(s)	284, 544, 665, 759, 1022, 1075, 1228
AhdI	GACNNNNNGTC	1 cut(s)	557
AjiI	CACGTC	1 cut(s)	1409
AjuI	GAANNNNNNNTTGG	2 cut(s)	23, 55
AleI	CACNNNNGTG	1 cut(s)	572
AluBI	AGCT	4 cut(s)	609, 700, 1025, 1352
AluI	AGCT	4 cut(s)	609, 700, 1025, 1352
Alw21I	GWGCWC	3 cut(s)	72, 372, 489
Alw26I	GTCTC	3 cut(s)	241, 342, 665
Alw44I	GTGCAC	2 cut(s)	68, 368
AlwI	GGATC	1 cut(s)	1090
AlwNI	CAGNNNCTG	1 cut(s)	1355
Aor13HI	TCCGGA	1 cut(s)	311
AoxI	GGCC	2 cut(s)	450, 1181
ApaLI	GTGCAC	2 cut(s)	68, 368
ApeKI	GCWGC	2 cut(s)	206, 1042
ApoI	RAATTY	3 cut(s)	749, 760, 1087
AsiGI	ACCGGT	1 cut(s)	500
Asp700I	GAANNNNTTC	1 cut(s)	785
AspA2I	CCTAGG	1 cut(s)	971
AspLEI	GCGC	1 cut(s)	475
AspS9I	GGNCC	2 cut(s)	332, 1334
AsuC2I	CCSGG	2 cut(s)	215, 336
AsuHPI	GGTGA	3 cut(s)	586, 928, 1432
AvaII	GGWCC	2 cut(s)	332, 1334
AvrII	CCTAGG	1 cut(s)	971
AxyI	CCTNAGG	1 cut(s)	395
BaeGI	GKGCMC	2 cut(s)	72, 372
BalI	TGGCCA	1 cut(s)	452
BanII	GRGCYC	1 cut(s)	342
BauI	CACGAG	1 cut(s)	1209
Bbv12I	GWGCWC	3 cut(s)	72, 372, 489
BbvCI	CCTCAGC	1 cut(s)	1382
BbvI	GCAGC	2 cut(s)	193, 1029
BccI	CCATC	3 cut(s)	131, 374, 1411
BceAI	ACGGC	2 cut(s)	373, 403
BclI	TGATCA	1 cut(s)	576
BcnI	CCSGG	2 cut(s)	215, 336
BcoDI	GTCTC	3 cut(s)	241, 342, 665
BfaI	CTAG	2 cut(s)	182, 972
BfmI	CTRYAG	1 cut(s)	1285
BisI	GCNGC	2 cut(s)	207, 1043
BlnI	CCTAGG	1 cut(s)	971
BlsI	GCNGC	2 cut(s)	208, 1044
Bme1390I	CCNGG	2 cut(s)	215, 336
Bme18I	GGWCC	2 cut(s)	332, 1334
BmeRI	GACNNNNNGTC	1 cut(s)	557
BmgBI	CACGTC	1 cut(s)	1409
BmgT120I	GGNCC	2 cut(s)	332, 1334
BmiI	GGNNCC	3 cut(s)	333, 651, 1314
BmrFI	CCNGG	2 cut(s)	215, 336
BmrI	ACTGGG	1 cut(s)	1365
BmuI	ACTGGG	1 cut(s)	1365
BplI	GAGNNNNNCTC	2 cut(s)	145, 177
BpmI	CTGGAG	1 cut(s)	894
Bpu10I	CCTNAGC	1 cut(s)	1382
BpuMI	CCSGG	2 cut(s)	215, 336
BsaAI	YACGTR	1 cut(s)	507
BsaHI	GRCGYC	1 cut(s)	147
BsaI	GGTCTC	1 cut(s)	665
BsaJI	CCNNGG	5 cut(s)	201, 335, 412, 675, 971
BsaWI	WCCGGW	2 cut(s)	311, 500
Bsc4I	CCNNNNNNNGG	3 cut(s)	380, 500, 507
Bse118I	RCCGGY	1 cut(s)	500
Bse1I	ACTGG	3 cut(s)	223, 263, 1360
Bse21I	CCTNAGG	1 cut(s)	395
Bse3DI	GCAATG	2 cut(s)	891, 1063
BseAI	TCCGGA	1 cut(s)	311
BseDI	CCNNGG	5 cut(s)	201, 335, 412, 675, 971
BseGI	GGATG	2 cut(s)	792, 1422
BseLI	CCNNNNNNNGG	3 cut(s)	380, 500, 507
BseMI	GCAATG	2 cut(s)	891, 1063
BseMII	CTCAG	2 cut(s)	459, 1373
BseNI	ACTGG	3 cut(s)	223, 263, 1360
BseRI	GAGGAG	2 cut(s)	95, 1197
BseSI	GKGCMC	2 cut(s)	72, 372
BseXI	GCAGC	2 cut(s)	193, 1029
BseYI	CCCAGC	1 cut(s)	609
BsgI	GTGCAG	1 cut(s)	309
Bsh1236I	CGCG	1 cut(s)	861
BshFI	GGCC	2 cut(s)	452, 1183
BshTI	ACCGGT	1 cut(s)	500
BsiHKAI	GWGCWC	3 cut(s)	72, 372, 489
BsiSI	CCGG	4 cut(s)	214, 312, 335, 501
BslFI	GGGAC	4 cut(s)	230, 278, 345, 1419
BslI	CCNNNNNNNGG	3 cut(s)	380, 500, 507
BsmAI	GTCTC	3 cut(s)	241, 342, 665
BsmBI	CGTCTC	1 cut(s)	342
BsmFI	GGGAC	4 cut(s)	230, 278, 345, 1419
BsnI	GGCC	2 cut(s)	452, 1183
Bso31I	GGTCTC	1 cut(s)	665
Bsp1286I	GDGCHC	4 cut(s)	72, 342, 372, 489
Bsp13I	TCCGGA	1 cut(s)	311
Bsp143I	GATC	3 cut(s)	576, 799, 1095
Bsp19I	CCATGG	1 cut(s)	412
BspACI	CCGC	6 cut(s)	113, 129, 296, 511, 859, 914
BspANI	GGCC	2 cut(s)	452, 1183
BspCNI	CTCAG	2 cut(s)	460, 1374
BspEI	TCCGGA	1 cut(s)	311
BspFNI	CGCG	1 cut(s)	861
BspHI	TCATGA	1 cut(s)	814
BspLI	GGNNCC	3 cut(s)	333, 651, 1314
BspMAI	CTGCAG	1 cut(s)	1289
BspPI	GGATC	1 cut(s)	1090
BspQI	GCTCTTC	2 cut(s)	347, 477
BspTNI	GGTCTC	1 cut(s)	665
BsrDI	GCAATG	2 cut(s)	891, 1063
BsrFI	RCCGGY	1 cut(s)	500
BsrI	ACTGG	3 cut(s)	223, 263, 1360
BssAI	RCCGGY	1 cut(s)	500
BssECI	CCNNGG	5 cut(s)	201, 335, 412, 675, 971
BssMI	GATC	3 cut(s)	576, 799, 1095
BssNI	GRCGYC	1 cut(s)	147
BssSI	CACGAG	1 cut(s)	1209
BssT1I	CCWWGG	3 cut(s)	412, 675, 971
Bst2BI	CACGAG	1 cut(s)	1209
Bst4CI	ACNGT	5 cut(s)	67, 83, 367, 439, 685
Bst6I	CTCTTC	2 cut(s)	347, 477
BstACI	GRCGYC	1 cut(s)	147
BstAPI	GCANNNNNTGC	1 cut(s)	1378
BstBAI	YACGTR	1 cut(s)	507
BstC8I	GCNNGC	1 cut(s)	6
BstDEI	CTNAG	3 cut(s)	395, 468, 1382
BstDSI	CCRYGG	2 cut(s)	201, 412
BstF5I	GGATG	2 cut(s)	792, 1422
BstFNI	CGCG	1 cut(s)	861
BstHHI	GCGC	1 cut(s)	475
BstKTI	GATC	3 cut(s)	579, 802, 1098
BstMAI	GTCTC	3 cut(s)	241, 342, 665
BstMBI	GATC	3 cut(s)	576, 799, 1095
BstMWI	GCNNNNNNNGC	5 cut(s)	76, 128, 517, 920, 1378
BstNSI	RCATGY	2 cut(s)	1052, 1109
BstSCI	CCNGG	2 cut(s)	213, 334
BstSFI	CTRYAG	1 cut(s)	1285
BstSLI	GKGCMC	2 cut(s)	72, 372
BstUI	CGCG	1 cut(s)	861
BstV1I	GCAGC	2 cut(s)	193, 1029
BstX2I	RGATCY	1 cut(s)	1095
BstXI	CCANNNNNNTGG	2 cut(s)	1324, 1402
BstYI	RGATCY	1 cut(s)	1095
Bsu36I	CCTNAGG	1 cut(s)	395
BsuRI	GGCC	2 cut(s)	452, 1183
BtgI	CCRYGG	2 cut(s)	201, 412
BtrI	CACGTC	1 cut(s)	1409
BtsCI	GGATG	2 cut(s)	792, 1422
BtsI	GCAGTG	1 cut(s)	24
BtsIMutI	CAGTG	5 cut(s)	24, 47, 270, 435, 1176
Cac8I	GCNNGC	1 cut(s)	6
CaiI	CAGNNNCTG	1 cut(s)	1355
CciI	TCATGA	1 cut(s)	814
CfoI	GCGC	1 cut(s)	475
Cfr10I	RCCGGY	1 cut(s)	500
Cfr13I	GGNCC	2 cut(s)	332, 1334
CseI	GACGC	1 cut(s)	155
Csp6I	GTAC	2 cut(s)	504, 1013
CspAI	ACCGGT	1 cut(s)	500
CviAII	CATG	9 cut(s)	117, 172, 413, 442, 448, 703, 815, 1049, 1106
CviQI	GTAC	2 cut(s)	504, 1013
DdeI	CTNAG	3 cut(s)	395, 468, 1382
DpnI	GATC	3 cut(s)	578, 801, 1097
DpnII	GATC	3 cut(s)	576, 799, 1095
DriI	GACNNNNNGTC	1 cut(s)	557
EaeI	YGGCCR	1 cut(s)	450
Eam1104I	CTCTTC	2 cut(s)	347, 477
Eam1105I	GACNNNNNGTC	1 cut(s)	557
EarI	CTCTTC	2 cut(s)	347, 477
Eco130I	CCWWGG	3 cut(s)	412, 675, 971
Eco24I	GRGCYC	1 cut(s)	342
Eco31I	GGTCTC	1 cut(s)	665
Eco47I	GGWCC	2 cut(s)	332, 1334
Eco57I	CTGAAG	2 cut(s)	328, 876
Eco81I	CCTNAGG	1 cut(s)	395
EcoRI	GAATTC	1 cut(s)	1087
EcoT14I	CCWWGG	3 cut(s)	412, 675, 971
EcoT38I	GRGCYC	1 cut(s)	342
ErhI	CCWWGG	3 cut(s)	412, 675, 971
Esp3I	CGTCTC	1 cut(s)	342
FaeI	CATG	9 cut(s)	120, 175, 416, 445, 451, 706, 818, 1052, 1109
FalI	AAGNNNNNCTT	2 cut(s)	659, 691
FaqI	GGGAC	4 cut(s)	230, 278, 345, 1419
FatI	CATG	9 cut(s)	116, 171, 412, 441, 447, 702, 814, 1048, 1105
FauI	CCCGC	1 cut(s)	303
FbaI	TGATCA	1 cut(s)	576
Fnu4HI	GCNGC	2 cut(s)	207, 1043
FokI	GGATG	2 cut(s)	779, 1429
FriOI	GRGCYC	1 cut(s)	342
Fsp4HI	GCNGC	2 cut(s)	207, 1043
FspBI	CTAG	2 cut(s)	182, 972
GlaI	GCGC	1 cut(s)	474
GluI	GCNGC	2 cut(s)	207, 1043
GsaI	CCCAGC	1 cut(s)	613
GsuI	CTGGAG	1 cut(s)	894
HaeIII	GGCC	2 cut(s)	452, 1183
HapII	CCGG	4 cut(s)	214, 312, 335, 501
HgaI	GACGC	1 cut(s)	155
HhaI	GCGC	1 cut(s)	475
Hin1I	GRCGYC	1 cut(s)	147
Hin1II	CATG	9 cut(s)	120, 175, 416, 445, 451, 706, 818, 1052, 1109
Hin6I	GCGC	1 cut(s)	473
HinP1I	GCGC	1 cut(s)	473
HincII	GTYRAC	1 cut(s)	177
HindII	GTYRAC	1 cut(s)	177
HinfI	GANTC	7 cut(s)	21, 197, 268, 755, 903, 934, 1202
HpaII	CCGG	4 cut(s)	214, 312, 335, 501
HphI	GGTGA	3 cut(s)	586, 928, 1432
Hpy166II	GTNNAC	5 cut(s)	70, 177, 370, 516, 1134
Hpy188I	TCNGA	6 cut(s)	20, 250, 347, 1093, 1249, 1334
Hpy188III	TCNNGA	7 cut(s)	312, 562, 815, 1001, 1032, 1099, 1414
Hpy8I	GTNNAC	5 cut(s)	70, 177, 370, 516, 1134
HpyAV	CCTTC	8 cut(s)	25, 99, 278, 318, 538, 632, 685, 1038
HpyCH4III	ACNGT	5 cut(s)	67, 83, 367, 439, 685
HpyCH4IV	ACGT	3 cut(s)	506, 585, 1408
HpyCH4V	TGCA	9 cut(s)	4, 70, 290, 370, 884, 1045, 1141, 1178, 1287
HpyF10VI	GCNNNNNNNGC	5 cut(s)	76, 128, 517, 920, 1378
HpyF3I	CTNAG	3 cut(s)	395, 468, 1382
HpySE526I	ACGT	3 cut(s)	506, 585, 1408
Hsp92I	GRCGYC	1 cut(s)	147
Hsp92II	CATG	9 cut(s)	120, 175, 416, 445, 451, 706, 818, 1052, 1109
HspAI	GCGC	1 cut(s)	473
Kpn2I	TCCGGA	1 cut(s)	311
Ksp22I	TGATCA	1 cut(s)	576
Kzo9I	GATC	3 cut(s)	576, 799, 1095
LguI	GCTCTTC	2 cut(s)	347, 477
LmnI	GCTCC	2 cut(s)	527, 1030
Lsp1109I	GCAGC	2 cut(s)	193, 1029
MaeI	CTAG	2 cut(s)	182, 972
MaeII	ACGT	3 cut(s)	506, 585, 1408
MaeIII	GTNAC	8 cut(s)	22, 45, 265, 383, 433, 496, 916, 1219
MalI	GATC	3 cut(s)	578, 801, 1097
MboI	GATC	3 cut(s)	576, 799, 1095
MboII	GAAGA	6 cut(s)	334, 494, 719, 722, 1280, 1372
MfeI	CAATTG	1 cut(s)	1017
MflI	RGATCY	1 cut(s)	1095
MhlI	GDGCHC	4 cut(s)	72, 342, 372, 489
MlsI	TGGCCA	1 cut(s)	452
MluCI	AATT	9 cut(s)	165, 660, 733, 749, 760, 991, 1017, 1087, 1375
MluNI	TGGCCA	1 cut(s)	452
MlyI	GAGTC	3 cut(s)	30, 191, 262
MmeI	TCCRAC	1 cut(s)	459
Mox20I	TGGCCA	1 cut(s)	452
MroI	TCCGGA	1 cut(s)	311
MroXI	GAANNNNTTC	1 cut(s)	785
MscI	TGGCCA	1 cut(s)	452
MseI	TTAA	4 cut(s)	765, 864, 870, 1239
MslI	CAYNNNNRTG	3 cut(s)	440, 446, 572
Msp20I	TGGCCA	1 cut(s)	452
MspA1I	CMGCKG	1 cut(s)	914
MspI	CCGG	4 cut(s)	214, 312, 335, 501
MspR9I	CCNGG	2 cut(s)	215, 336
MunI	CAATTG	1 cut(s)	1017
MvnI	CGCG	1 cut(s)	861
MwoI	GCNNNNNNNGC	5 cut(s)	76, 128, 517, 920, 1378
NciI	CCSGG	2 cut(s)	215, 336
NcoI	CCATGG	1 cut(s)	412
NdeII	GATC	3 cut(s)	576, 799, 1095
NlaIII	CATG	9 cut(s)	120, 175, 416, 445, 451, 706, 818, 1052, 1109
NlaIV	GGNNCC	3 cut(s)	333, 651, 1314
NmeAIII	GCCGAG	1 cut(s)	175
NmuCI	GTSAC	8 cut(s)	22, 45, 265, 383, 433, 496, 916, 1219
NspI	RCATGY	2 cut(s)	1052, 1109
OliI	CACNNNNGTG	1 cut(s)	572
PagI	TCATGA	1 cut(s)	814
PciI	ACATGT	1 cut(s)	1048
PciSI	GCTCTTC	2 cut(s)	347, 477
PcsI	WCGNNNNNNNCGW	1 cut(s)	198
PdmI	GAANNNNTTC	1 cut(s)	785
PfeI	GAWTC	4 cut(s)	755, 903, 934, 1202
PfoI	TCCNGGA	1 cut(s)	213
PinAI	ACCGGT	1 cut(s)	500
PkrI	GCNGC	2 cut(s)	208, 1044
PleI	GAGTC	3 cut(s)	29, 191, 262
PpsI	GAGTC	3 cut(s)	29, 191, 262
Ppu21I	YACGTR	1 cut(s)	507
PscI	ACATGT	1 cut(s)	1048
PsiI	TTATAA	1 cut(s)	1432
PspFI	CCCAGC	1 cut(s)	609
PspN4I	GGNNCC	3 cut(s)	333, 651, 1314
PspPI	GGNCC	2 cut(s)	332, 1334
PstI	CTGCAG	1 cut(s)	1289
PstNI	CAGNNNCTG	1 cut(s)	1355
PsuI	RGATCY	1 cut(s)	1095
RsaI	GTAC	2 cut(s)	505, 1014
RsaNI	GTAC	2 cut(s)	504, 1013
RseI	CAYNNNNRTG	3 cut(s)	440, 446, 572
SapI	GCTCTTC	2 cut(s)	347, 477
SaqAI	TTAA	4 cut(s)	765, 864, 870, 1239
SatI	GCNGC	2 cut(s)	207, 1043
Sau3AI	GATC	3 cut(s)	576, 799, 1095
Sau96I	GGNCC	2 cut(s)	332, 1334
SchI	GAGTC	3 cut(s)	30, 191, 262
ScrFI	CCNGG	2 cut(s)	215, 336
SduI	GDGCHC	4 cut(s)	72, 342, 372, 489
SfcI	CTRYAG	1 cut(s)	1285
SinI	GGWCC	2 cut(s)	332, 1334
SmiMI	CAYNNNNRTG	3 cut(s)	440, 446, 572
Sse9I	AATT	9 cut(s)	165, 660, 733, 749, 760, 991, 1017, 1087, 1375
SsiI	CCGC	6 cut(s)	113, 129, 296, 511, 859, 914
SspI	AATATT	1 cut(s)	39
SspMI	CTAG	2 cut(s)	182, 972
StyD4I	CCNGG	2 cut(s)	213, 334
StyI	CCWWGG	3 cut(s)	412, 675, 971
TaaI	ACNGT	5 cut(s)	67, 83, 367, 439, 685
TaiI	ACGT	3 cut(s)	509, 588, 1411
TaqI	TCGA	3 cut(s)	192, 378, 1000
TasI	AATT	9 cut(s)	165, 660, 733, 749, 760, 991, 1017, 1087, 1375
TfiI	GAWTC	4 cut(s)	755, 903, 934, 1202
Tru1I	TTAA	4 cut(s)	765, 864, 870, 1239
Tru9I	TTAA	4 cut(s)	765, 864, 870, 1239
TscAI	CASTG	5 cut(s)	31, 54, 270, 442, 1176
TseFI	GTSAC	8 cut(s)	22, 45, 265, 383, 433, 496, 916, 1219
TseI	GCWGC	2 cut(s)	206, 1042
Tsp45I	GTSAC	8 cut(s)	22, 45, 265, 383, 433, 496, 916, 1219
TspDTI	ATGAA	8 cut(s)	436, 762, 778, 799, 803, 1092, 1266, 1292
TspGWI	ACGGA	1 cut(s)	190
TspRI	CASTG	5 cut(s)	31, 54, 270, 442, 1176
VneI	GTGCAC	2 cut(s)	68, 368
VpaK11BI	GGWCC	2 cut(s)	332, 1334
XapI	RAATTY	3 cut(s)	749, 760, 1087
XceI	RCATGY	2 cut(s)	1052, 1109
XcmI	CCANNNNNNNNNTGG	2 cut(s)	419, 1191
XmaJI	CCTAGG	1 cut(s)	971
XmnI	GAANNNNTTC	1 cut(s)	785
XspI	CTAG	2 cut(s)	182, 972

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.